Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0001912

Physical Location & Seq

Genomic Coordinates Forward (+)

35664189 .. 35667474

Gene Structure 3286 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ45249

Sequence Viewer

CDS Protein Promoter (2k)

Length: 168 bp

ATGGCTTACGGTCAAACTGGTACAGGGAAGATTTACACACTTGGCAGGCTGGGTTGTGATGATGCATTGGAGCGTGGTATTATGGTTAGAGCTTTGGAGGACATTATTTTGAGTACGGCTCCGGAGTCTGATACAGTGGAAGTTTCATACTTGCAGGTAATCTGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003774 GO:0003777 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005856 GO:0005871 GO:0005875 GO:0006928 GO:0007017 GO:0007018 GO:0008150 GO:0009987 GO:0015630 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0032991 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0044422 GO:0044424 GO:0044430 GO:0044446 GO:0044464

KEGG Pathways

Metabolic & Signaling

ko04144 ko04728 map04144 map04728

Pfam Domains

Protein Families

Arm Kinesin

Protein Analysis

55

Amino Acids

6.02

Weight (kDa)

4.29

Isoelectric Point (pI)

20.66

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Kinesin	PF00225	1 - 53	3.2e-08	Kinesin motor domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Publication-ready

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Orthologous Genes (Group: OG0001912)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G54870 AT3G54870 AT3G54870
fragaria_vesca	FvH4_2g41290 FvH4_7g18790 FvH4_7g18790 FvH4_7g18790 FvH4_7g18790 FvH4_7g18790 FvH4_7g18790 FvH4_7g18790 FvH4_7g18790 FvH4_7g18790
malus_domestica	MD01G1103200.v1.1 MD07G1169900.v1.1
prunus_persica	Prupe.2G208800_v2.0.a1 Prupe.2G208800_v2.0.a1 Prupe.2G208800_v2.0.a1
pyrus_communis	pycom01g12970 pycom07g16380
rosa_chinensis	RchiOBHm_Chr1g0362591 RchiOBHm_Chr3g0488101
rosa_laevigata	RLG00000027636
rosa_multiflora	Rmu_co8281713.1_g000001 Rmu_sc0001716.1_g000001
rosa_roxburghii	Rroxscaffold_1G00043680 Rroxscaffold_2G00076710 Rroxscaffold_3G00218650 Rroxscaffold_4G00293920 Rroxscaffold_4G00293930
rosa_rugosa	Rorug01G0299900.1
rosa_samantha	Rh1AG308500 Rh1BG272200 Rh1CG289400 Rh1DG302600 Rh2AG571000 Rh2BG101900 Rh2CG104300 Rh3AG286300 Rh5AG442000 Rh5BG250100 Rh5BG250200 Rh5BG276500
rosa_wichuraiana	Rw1G008860 Rw1G027400 Rw6G016290

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	145
AccIII	TCCGGA	1 cut(s)	121
AfaI	GTAC	2 cut(s)	22, 115
AluBI	AGCT	1 cut(s)	92
AluI	AGCT	1 cut(s)	92
Aor13HI	TCCGGA	1 cut(s)	121
BceAI	ACGGC	1 cut(s)	132
BfuAI	ACCTGC	1 cut(s)	145
BmiI	GGNNCC	1 cut(s)	120
BmsI	GCATC	1 cut(s)	52
BplI	GAGNNNNNCTC	2 cut(s)	103, 135
BsaWI	WCCGGW	1 cut(s)	121
Bse1I	ACTGG	1 cut(s)	22
BseAI	TCCGGA	1 cut(s)	121
BseNI	ACTGG	1 cut(s)	22
BseYI	CCCAGC	1 cut(s)	49
BsiSI	CCGG	1 cut(s)	122
Bsp13I	TCCGGA	1 cut(s)	121
BspEI	TCCGGA	1 cut(s)	121
BspLI	GGNNCC	1 cut(s)	120
BspMI	ACCTGC	1 cut(s)	145
BsrI	ACTGG	1 cut(s)	22
Bst4CI	ACNGT	2 cut(s)	11, 136
BstC8I	GCNNGC	1 cut(s)	47
BtsIMutI	CAGTG	1 cut(s)	141
BveI	ACCTGC	1 cut(s)	145
Cac8I	GCNNGC	1 cut(s)	47
Csp6I	GTAC	2 cut(s)	21, 114
CviJI	RGCY	4 cut(s)	5, 49, 92, 119
CviKI_1	RGCY	4 cut(s)	5, 49, 92, 119
CviQI	GTAC	2 cut(s)	21, 114
EcoT22I	ATGCAT	1 cut(s)	67
FaiI	YATR	2 cut(s)	83, 148
GsaI	CCCAGC	1 cut(s)	53
HapII	CCGG	1 cut(s)	122
HinfI	GANTC	1 cut(s)	125
HpaII	CCGG	1 cut(s)	122
Hpy188I	TCNGA	1 cut(s)	130
Hpy188III	TCNNGA	1 cut(s)	122
HpyCH4III	ACNGT	2 cut(s)	11, 136
HpyCH4V	TGCA	2 cut(s)	65, 154
Kpn2I	TCCGGA	1 cut(s)	121
LmnI	GCTCC	2 cut(s)	70, 124
LpnPI	CCDG	7 cut(s)	3, 9, 31, 35, 135, 140, 148
LweI	GCATC	1 cut(s)	52
MboII	GAAGA	1 cut(s)	40
MlyI	GAGTC	1 cut(s)	134
MnlI	CCTC	1 cut(s)	91
Mph1103I	ATGCAT	1 cut(s)	67
MroI	TCCGGA	1 cut(s)	121
MspI	CCGG	1 cut(s)	122
NlaIV	GGNNCC	1 cut(s)	120
NsiI	ATGCAT	1 cut(s)	67
PleI	GAGTC	1 cut(s)	133
PpsI	GAGTC	1 cut(s)	133
PspFI	CCCAGC	1 cut(s)	49
PspN4I	GGNNCC	1 cut(s)	120
RsaI	GTAC	2 cut(s)	22, 115
RsaNI	GTAC	2 cut(s)	21, 114
SchI	GAGTC	1 cut(s)	134
SetI	ASST	2 cut(s)	94, 159
SfaNI	GCATC	1 cut(s)	52
SgeI	CNNG	8 cut(s)	30, 36, 53, 58, 62, 86, 134, 163
TaaI	ACNGT	2 cut(s)	11, 136
TscAI	CASTG	1 cut(s)	141
TspDTI	ATGAA	1 cut(s)	135
TspRI	CASTG	1 cut(s)	141
Zsp2I	ATGCAT	1 cut(s)	67

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.