MD10G1202600.v1.1
ERF Family

2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr10
Physical Location & Seq
Reverse (-)
30026948 .. 30033436
6489 bp
Loading structure...
UTR
Exon/CDS
Intron
MD10G1202600.v1.1.491

Sequence Viewer

Length: 1422 bp
ATGGCAGGTAATGGTCTGCCATCTCTGGGTCGTGTGAAACTAGCCGATTTGGCTCCTGCTGAAGGCCTTCCATCAGATTCTTACAAACTATCTGTTTCAACTTTGTCACAATCACTAGCTCAGTATTCTGCTGCCATCATTCAGTTTCCAGTGAGTGATGGGGCTCTTTTGAGGTCGGGTTTAGATTCGGCTCACCTCTACTTCCACCAGAAAGCATCATACCCAGCTGCCGATATGGTTAATAATAATGACCCTCGTGACTGGTGCAAGACTTCCGGTTATAATGCAGATCCCCAATTGTGGCTGGAAACCTATGATTACAGACCTGGACTCACTCCTTTAGAGCCCAACAACACAATGGAATTTCCTCCAGCAGGTGTACCAGATATATTTTCAATGCTTGCAAAGGCAGCTAAGGATATATTGGATGCTATCAGCTTCTATTTGAACTTGAGGAGCTCTCCATTTACTGAAGTACTTGATAATGTTCCCTTAAGAAATCAGGAAATATCTTCTTCAGTATTATCTGTCTGCTGTCATGCAAGGCCTTCATTTCAGGGCGCACAACACCATAATTTTACGACCCAAGAGGATGGCCAGTTGGTTATGTTTTCTGACCATGAGCATCAAGTTGACAAAAGCTTGATATCTCTTGTCAAGTCAGACAAGGCCGGTCTACACATAAAGGACTTTCAGGGTCGTTGGGTTCTTGTGGATGGCGATCTTGGTCCTCAAGAAGCTATTGTTTACCCCGGACTTGCACTCTATCAGGCAACTGCAGGATATGTCAACCCAGCACTACAGAGAACAGAGCCTACTAATACACAGAGTAACTTGTTTGGGCGATGTTCCTTGGCATTTAAACTCATGCCTAAACCCATGACCAGTCTCAGTTGTTCAGAGATGAGAGCCGCTGGTCATGGGGTTGAACCTCAGTTCCAGCTTCCAGTAGCGGTTGATGACTTTATGCAGAGATCTCACCCCACCGATCAACTCTTTAACAGACTCAGTTTTCAAAGTTTCAATTTTCTTGCAGCACAAGATGGATCTGTGAAGCCTTTGTTGAGGAGGAGAAAGAGTGAAAGAACCAAACCTCTGCCGCCTTCCAAGAGATTACGGGTCGAGGCCCAGAGAGTCCTGAAGGAAAGGGTTCAAGACATTGCAGACAAGAAGGGAATCAAGCTGAGGTTCTGCAACCTGAAGGAGTGTGAGAGTCACATTCAGGCACTTGATAGCCCATGTGCAAATATAAGATTGGAGATCGGGTGGCCGCATGGAGTGCCATTTGTTCATCCCCATGATCTCCCAAACAAGGCAAAGATCGGTTTCCTTGAAGCCTATGAACCTGGTTGGACTGCTACTCATGATATGGAGTTAAGTCTAACTGAACCTGGACAAGCCGGCCAGTCAACACTCAGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

474

Amino Acids

52.34

Weight (kDa)

6.32

Isoelectric Point (pI)

47.09

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 282
AarI CACCTGC 1 cut(s) 365
Acc36I ACCTGC 1 cut(s) 365
AccI GTMKAC 1 cut(s) 676
AciI CCGC 4 cut(s) 912, 953, 1100, 1271
AclWI GGATC 2 cut(s) 284, 1054
AcoI YGGCCR 3 cut(s) 595, 1268, 1402
AcsI RAATTY 1 cut(s) 362
AcuI CTGAAG 5 cut(s) 81, 492, 501, 1160, 1220
AfaI GTAC 2 cut(s) 381, 477
AfiI CCNNNNNNNGG 5 cut(s) 26, 62, 300, 374, 1312
AflII CTTAAG 1 cut(s) 493
AgsI TTSAA 8 cut(s) 99, 396, 448, 929, 1016, 1024, 1154, 1334
AjnI CCWGG 3 cut(s) 325, 1345, 1390
AloI GAACNNNNNNTCC 2 cut(s) 921, 953
AluBI AGCT 9 cut(s) 119, 227, 413, 438, 459, 642, 740, 943, 1183
AluI AGCT 9 cut(s) 119, 227, 413, 438, 459, 642, 740, 943, 1183
Alw21I GWGCWC 1 cut(s) 461
Alw26I GTCTC 1 cut(s) 893
AlwI GGATC 2 cut(s) 284, 1054
AoxI GGCC 7 cut(s) 64, 545, 595, 669, 1125, 1268, 1402
ApeKI GCWGC 4 cut(s) 131, 227, 410, 1034
ApoI RAATTY 1 cut(s) 362
Asp700I GAANNNNTTC 2 cut(s) 66, 1149
AspLEI GCGC 1 cut(s) 563
AspS9I GGNCC 2 cut(s) 728, 1126
AsuC2I CCSGG 1 cut(s) 753
AsuHPI GGTGA 2 cut(s) 185, 971
AvaII GGWCC 1 cut(s) 728
BalI TGGCCA 1 cut(s) 597
BanII GRGCYC 3 cut(s) 166, 348, 461
BauI CACGAG 1 cut(s) 255
Bbv12I GWGCWC 1 cut(s) 461
BbvCI CCTCAGC 1 cut(s) 1184
BbvI GCAGC 4 cut(s) 118, 214, 422, 1046
BccI CCATC 7 cut(s) 28, 79, 143, 152, 587, 710, 1037
BciT130I CCWGG 3 cut(s) 327, 1347, 1392
BcnI CCSGG 1 cut(s) 753
BcoDI GTCTC 1 cut(s) 893
BfaI CTAG 2 cut(s) 41, 116
BfmI CTRYAG 2 cut(s) 777, 800
BfrI CTTAAG 1 cut(s) 493
BfuAI ACCTGC 1 cut(s) 365
BglI GCCNNNNNGGC 1 cut(s) 50
BglII AGATCT 1 cut(s) 974
BisI GCNGC 7 cut(s) 132, 228, 411, 912, 1035, 1100, 1271
BlsI GCNGC 7 cut(s) 133, 229, 412, 913, 1036, 1101, 1272
BmcAI AGTACT 1 cut(s) 477
Bme1390I CCNGG 4 cut(s) 327, 753, 1347, 1392
Bme18I GGWCC 1 cut(s) 728
BmgT120I GGNCC 2 cut(s) 728, 1126
BmiI GGNNCC 1 cut(s) 54
BmrFI CCNGG 4 cut(s) 327, 753, 1347, 1392
BmsI GCATC 3 cut(s) 224, 418, 634
BplI GAGNNNNNCTC 2 cut(s) 445, 477
BpmI CTGGAG 1 cut(s) 354
Bpu10I CCTNAGC 2 cut(s) 414, 1184
BpuEI CTTGAG 2 cut(s) 472, 717
BpuMI CCSGG 1 cut(s) 753
BsaBI GATNNNNATC 1 cut(s) 720
BsaJI CCNNGG 2 cut(s) 751, 852
BsaWI WCCGGW 1 cut(s) 275
BsaXI ACNNNNNCTCC 4 cut(s) 1063, 1093, 1250, 1280
Bsc4I CCNNNNNNNGG 5 cut(s) 26, 62, 300, 374, 1312
Bse118I RCCGGY 2 cut(s) 671, 1400
Bse1I ACTGG 6 cut(s) 149, 266, 598, 885, 947, 1405
Bse3DI GCAATG 1 cut(s) 1158
Bse8I GATNNNNATC 1 cut(s) 720
BseBI CCWGG 3 cut(s) 327, 1347, 1392
BseDI CCNNGG 2 cut(s) 751, 852
BseGI GGATG 4 cut(s) 433, 598, 721, 1291
BseJI GATNNNNATC 1 cut(s) 720
BseLI CCNNNNNNNGG 5 cut(s) 26, 62, 300, 374, 1312
BseMI GCAATG 1 cut(s) 1158
BseMII CTCAG 5 cut(s) 134, 904, 947, 1021, 1175
BseNI ACTGG 6 cut(s) 149, 266, 598, 885, 947, 1405
BseRI GAGGAG 3 cut(s) 469, 1081, 1084
BseXI GCAGC 4 cut(s) 118, 214, 422, 1046
BseYI CCCAGC 2 cut(s) 223, 793
BshFI GGCC 7 cut(s) 66, 547, 597, 671, 1127, 1270, 1404
BsiHKAI GWGCWC 1 cut(s) 461
BsiSI CCGG 4 cut(s) 276, 672, 753, 1401
BslI CCNNNNNNNGG 5 cut(s) 26, 62, 300, 374, 1312
BsmAI GTCTC 1 cut(s) 893
BsnI GGCC 7 cut(s) 66, 547, 597, 671, 1127, 1270, 1404
Bsp1286I GDGCHC 3 cut(s) 166, 348, 461
Bsp143I GATC 8 cut(s) 289, 721, 974, 988, 1046, 1260, 1300, 1320
BspACI CCGC 4 cut(s) 912, 953, 1100, 1271
BspANI GGCC 7 cut(s) 66, 547, 597, 671, 1127, 1270, 1404
BspCNI CTCAG 5 cut(s) 133, 903, 946, 1020, 1176
BspHI TCATGA 1 cut(s) 1363
BspLI GGNNCC 1 cut(s) 54
BspMAI CTGCAG 1 cut(s) 781
BspMI ACCTGC 1 cut(s) 365
BspPI GGATC 2 cut(s) 284, 1054
BspTI CTTAAG 1 cut(s) 493
BsrDI GCAATG 1 cut(s) 1158
BsrFI RCCGGY 2 cut(s) 671, 1400
BsrI ACTGG 6 cut(s) 149, 266, 598, 885, 947, 1405
BssAI RCCGGY 2 cut(s) 671, 1400
BssECI CCNNGG 2 cut(s) 751, 852
BssMI GATC 8 cut(s) 289, 721, 974, 988, 1046, 1260, 1300, 1320
BssSI CACGAG 1 cut(s) 255
BssT1I CCWWGG 1 cut(s) 852
Bst2BI CACGAG 1 cut(s) 255
Bst2UI CCWGG 3 cut(s) 327, 1347, 1392
BstAFI CTTAAG 1 cut(s) 493
BstAPI GCANNNNNTGC 1 cut(s) 1279
BstC8I GCNNGC 2 cut(s) 402, 1402
BstDEI CTNAG 7 cut(s) 120, 414, 890, 933, 1007, 1184, 1415
BstENI CCTNNNNNAGG 2 cut(s) 60, 372
BstF5I GGATG 4 cut(s) 433, 598, 721, 1291
BstHHI GCGC 1 cut(s) 563
BstKTI GATC 8 cut(s) 292, 724, 977, 991, 1049, 1263, 1303, 1323
BstMAI GTCTC 1 cut(s) 893
BstMBI GATC 8 cut(s) 289, 721, 974, 988, 1046, 1260, 1300, 1320
BstMWI GCNNNNNNNGC 3 cut(s) 50, 410, 1279
BstNI CCWGG 3 cut(s) 327, 1347, 1392
BstSCI CCNGG 4 cut(s) 325, 751, 1345, 1390
BstSFI CTRYAG 2 cut(s) 777, 800
BstV1I GCAGC 4 cut(s) 118, 214, 422, 1046
BstX2I RGATCY 3 cut(s) 289, 974, 1046
BstXI CCANNNNNNTGG 1 cut(s) 593
BstYI RGATCY 3 cut(s) 289, 974, 1046
BsuRI GGCC 7 cut(s) 66, 547, 597, 671, 1127, 1270, 1404
BtgZI GCGATG 1 cut(s) 859
BtsCI GGATG 4 cut(s) 433, 598, 721, 1291
BtsIMutI CAGTG 1 cut(s) 156
BveI ACCTGC 1 cut(s) 365
Cac8I GCNNGC 2 cut(s) 402, 1402
CciI TCATGA 1 cut(s) 1363
CfoI GCGC 1 cut(s) 563
Cfr10I RCCGGY 2 cut(s) 671, 1400
Cfr13I GGNCC 2 cut(s) 728, 1126
CsiI ACCWGGT 1 cut(s) 1345
Csp6I GTAC 2 cut(s) 380, 476
CviAII CATG 9 cut(s) 539, 620, 868, 880, 920, 1239, 1274, 1298, 1364
CviQI GTAC 2 cut(s) 380, 476
DdeI CTNAG 7 cut(s) 120, 414, 890, 933, 1007, 1184, 1415
DpnI GATC 8 cut(s) 291, 723, 976, 990, 1048, 1262, 1302, 1322
DpnII GATC 8 cut(s) 289, 721, 974, 988, 1046, 1260, 1300, 1320
DraI TTTAAA 1 cut(s) 862
EaeI YGGCCR 3 cut(s) 595, 1268, 1402
Ecl136II GAGCTC 1 cut(s) 459
Eco130I CCWWGG 1 cut(s) 852
Eco147I AGGCCT 2 cut(s) 66, 547
Eco24I GRGCYC 3 cut(s) 166, 348, 461
Eco32I GATATC 1 cut(s) 648
Eco47I GGWCC 1 cut(s) 728
Eco53kI GAGCTC 1 cut(s) 459
Eco57I CTGAAG 5 cut(s) 81, 492, 501, 1160, 1220
EcoICRI GAGCTC 1 cut(s) 459
EcoNI CCTNNNNNAGG 2 cut(s) 60, 372
EcoRII CCWGG 3 cut(s) 325, 1345, 1390
EcoRV GATATC 1 cut(s) 648
EcoT14I CCWWGG 1 cut(s) 852
EcoT38I GRGCYC 3 cut(s) 166, 348, 461
ErhI CCWWGG 1 cut(s) 852
FaeI CATG 9 cut(s) 542, 623, 871, 883, 923, 1242, 1277, 1301, 1367
FatI CATG 9 cut(s) 538, 619, 867, 879, 919, 1238, 1273, 1297, 1363
FblI GTMKAC 1 cut(s) 676
Fnu4HI GCNGC 7 cut(s) 132, 228, 411, 912, 1035, 1100, 1271
FokI GGATG 4 cut(s) 440, 605, 728, 1278
FriOI GRGCYC 3 cut(s) 166, 348, 461
Fsp4HI GCNGC 7 cut(s) 132, 228, 411, 912, 1035, 1100, 1271
FspBI CTAG 2 cut(s) 41, 116
GlaI GCGC 1 cut(s) 562
GluI GCNGC 7 cut(s) 132, 228, 411, 912, 1035, 1100, 1271
GsaI CCCAGC 2 cut(s) 227, 797
GsuI CTGGAG 1 cut(s) 354
HaeIII GGCC 7 cut(s) 66, 547, 597, 671, 1127, 1270, 1404
HapII CCGG 4 cut(s) 276, 672, 753, 1401
HhaI GCGC 1 cut(s) 563
Hin1II CATG 9 cut(s) 542, 623, 871, 883, 923, 1242, 1277, 1301, 1367
Hin6I GCGC 1 cut(s) 561
HinP1I GCGC 1 cut(s) 561
HincII GTYRAC 3 cut(s) 634, 790, 1410
HindII GTYRAC 3 cut(s) 634, 790, 1410
HindIII AAGCTT 1 cut(s) 640
HinfI GANTC 7 cut(s) 77, 185, 330, 1005, 1134, 1176, 1213
HpaII CCGG 4 cut(s) 276, 672, 753, 1401
HphI GGTGA 2 cut(s) 185, 971
Hpy166II GTNNAC 6 cut(s) 380, 634, 677, 748, 790, 1410
Hpy188I TCNGA 4 cut(s) 76, 616, 664, 901
Hpy188III TCNNGA 6 cut(s) 257, 503, 734, 1138, 1154, 1364
Hpy8I GTNNAC 6 cut(s) 380, 634, 677, 748, 790, 1410
HpyAV CCTTC 7 cut(s) 56, 77, 558, 1113, 1135, 1165, 1195
HpyF10VI GCNNNNNNNGC 3 cut(s) 50, 410, 1279
HpyF3I CTNAG 7 cut(s) 120, 414, 890, 933, 1007, 1184, 1415
Hsp92II CATG 9 cut(s) 542, 623, 871, 883, 923, 1242, 1277, 1301, 1367
HspAI GCGC 1 cut(s) 561
KroI GCCGGC 1 cut(s) 1400
KroNI GCCGGC 1 cut(s) 1402
Kzo9I GATC 8 cut(s) 289, 721, 974, 988, 1046, 1260, 1300, 1320
LmnI GCTCC 2 cut(s) 58, 456
Lsp1109I GCAGC 4 cut(s) 118, 214, 422, 1046
LweI GCATC 3 cut(s) 224, 418, 634
MabI ACCWGGT 1 cut(s) 1345
MaeI CTAG 2 cut(s) 41, 116
MaeIII GTNAC 4 cut(s) 105, 257, 830, 1214
MalI GATC 8 cut(s) 291, 723, 976, 990, 1048, 1262, 1302, 1322
MboI GATC 8 cut(s) 289, 721, 974, 988, 1046, 1260, 1300, 1320
MboII GAAGA 2 cut(s) 504, 507
MfeI CAATTG 1 cut(s) 296
MflI RGATCY 3 cut(s) 289, 974, 1046
MhlI GDGCHC 3 cut(s) 166, 348, 461
MlsI TGGCCA 1 cut(s) 597
MluCI AATT 4 cut(s) 296, 362, 574, 1024
MluNI TGGCCA 1 cut(s) 597
MlyI GAGTC 4 cut(s) 324, 999, 1143, 1222
MmeI TCCRAC 1 cut(s) 1331
Mox20I TGGCCA 1 cut(s) 597
MroNI GCCGGC 1 cut(s) 1400
MroXI GAANNNNTTC 2 cut(s) 66, 1149
MscI TGGCCA 1 cut(s) 597
MseI TTAA 6 cut(s) 240, 494, 861, 999, 1376, 1420
MslI CAYNNNNRTG 1 cut(s) 1296
Msp20I TGGCCA 1 cut(s) 597
MspA1I CMGCKG 2 cut(s) 227, 914
MspCI CTTAAG 1 cut(s) 493
MspI CCGG 4 cut(s) 276, 672, 753, 1401
MspR9I CCNGG 4 cut(s) 327, 753, 1347, 1392
MunI CAATTG 1 cut(s) 296
MvaI CCWGG 3 cut(s) 327, 1347, 1392
MwoI GCNNNNNNNGC 3 cut(s) 50, 410, 1279
NaeI GCCGGC 1 cut(s) 1402
NciI CCSGG 1 cut(s) 753
NdeII GATC 8 cut(s) 289, 721, 974, 988, 1046, 1260, 1300, 1320
NgoMIV GCCGGC 1 cut(s) 1400
NlaIII CATG 9 cut(s) 542, 623, 871, 883, 923, 1242, 1277, 1301, 1367
NlaIV GGNNCC 1 cut(s) 54
NmuCI GTSAC 3 cut(s) 105, 257, 1214
PagI TCATGA 1 cut(s) 1363
PaqCI CACCTGC 1 cut(s) 365
PceI AGGCCT 2 cut(s) 66, 547
PdiI GCCGGC 1 cut(s) 1402
PdmI GAANNNNTTC 2 cut(s) 66, 1149
PfeI GAWTC 3 cut(s) 77, 185, 1176
PkrI GCNGC 7 cut(s) 133, 229, 412, 913, 1036, 1101, 1272
PleI GAGTC 4 cut(s) 324, 999, 1142, 1221
PpsI GAGTC 4 cut(s) 324, 999, 1142, 1221
PsiI TTATAA 1 cut(s) 282
Psp124BI GAGCTC 1 cut(s) 461
Psp6I CCWGG 3 cut(s) 325, 1345, 1390
PspFI CCCAGC 2 cut(s) 223, 793
PspGI CCWGG 3 cut(s) 325, 1345, 1390
PspN4I GGNNCC 1 cut(s) 54
PspPI GGNCC 2 cut(s) 728, 1126
PsrI GAACNNNNNNTAC 2 cut(s) 799, 831
PstI CTGCAG 1 cut(s) 781
PsuI RGATCY 3 cut(s) 289, 974, 1046
PvuII CAGCTG 1 cut(s) 227
RsaI GTAC 2 cut(s) 381, 477
RsaNI GTAC 2 cut(s) 380, 476
RseI CAYNNNNRTG 1 cut(s) 1296
SacI GAGCTC 1 cut(s) 461
SaqAI TTAA 6 cut(s) 240, 494, 861, 999, 1376, 1420
SatI GCNGC 7 cut(s) 132, 228, 411, 912, 1035, 1100, 1271
Sau3AI GATC 8 cut(s) 289, 721, 974, 988, 1046, 1260, 1300, 1320
Sau96I GGNCC 2 cut(s) 728, 1126
ScaI AGTACT 1 cut(s) 477
SchI GAGTC 4 cut(s) 324, 999, 1143, 1222
ScrFI CCNGG 4 cut(s) 327, 753, 1347, 1392
SduI GDGCHC 3 cut(s) 166, 348, 461
SexAI ACCWGGT 1 cut(s) 1345
SfaNI GCATC 3 cut(s) 224, 418, 634
SfcI CTRYAG 2 cut(s) 777, 800
SinI GGWCC 1 cut(s) 728
SmiMI CAYNNNNRTG 1 cut(s) 1296
SmlI CTYRAG 3 cut(s) 451, 493, 732
SmoI CTYRAG 3 cut(s) 451, 493, 732
Sse9I AATT 4 cut(s) 296, 362, 574, 1024
SseBI AGGCCT 2 cut(s) 66, 547
SsiI CCGC 4 cut(s) 912, 953, 1100, 1271
SspMI CTAG 2 cut(s) 41, 116
SstI GAGCTC 1 cut(s) 461
StuI AGGCCT 2 cut(s) 66, 547
StyD4I CCNGG 4 cut(s) 325, 751, 1345, 1390
StyI CCWWGG 1 cut(s) 852
TaqI TCGA 1 cut(s) 1122
TasI AATT 4 cut(s) 296, 362, 574, 1024
TatI WGTACW 1 cut(s) 475
TauI GCSGC 3 cut(s) 914, 1102, 1273
TfiI GAWTC 3 cut(s) 77, 185, 1176
Tru1I TTAA 6 cut(s) 240, 494, 861, 999, 1376, 1420
Tru9I TTAA 6 cut(s) 240, 494, 861, 999, 1376, 1420
TscAI CASTG 1 cut(s) 156
TseFI GTSAC 3 cut(s) 105, 257, 1214
TseI GCWGC 4 cut(s) 131, 227, 410, 1034
Tsp45I GTSAC 3 cut(s) 105, 257, 1214
TspDTI ATGAA 3 cut(s) 540, 1280, 1356
TspRI CASTG 1 cut(s) 156
Vha464I CTTAAG 1 cut(s) 493
VpaK11BI GGWCC 1 cut(s) 728
XagI CCTNNNNNAGG 2 cut(s) 60, 372
XapI RAATTY 1 cut(s) 362
XcmI CCANNNNNNNNNTGG 1 cut(s) 355
XmiI GTMKAC 1 cut(s) 676
XmnI GAANNNNTTC 2 cut(s) 66, 1149
XspI CTAG 2 cut(s) 41, 116
ZrmI AGTACT 1 cut(s) 477
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.