Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr13

Orthogroup ID

OG0000426

Physical Location & Seq

Genomic Coordinates Forward (+)

4988324 .. 4990946

Gene Structure 2623 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD13G1071000.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1689 bp

ATGAGCTTTTTATTCTATCTGTTCCTCCTAATTGTTATCTTGGCTTTGTGTTCTTCATGGATTCAAGGGAAAACAGTGCCCCATATGACTTCAGATGTCAATGAAGTTTCAGGCAAGTCCTTCGACTACATTGTCATTGGAGGAGGCACTGCCGGCTGTCCCCTAGCTGCAACCCTGTCGGAGAAATTCTCAGTGCTCTTGGTGGAACGAGGAGGATCACCATATGGAAATCCCTTGGTGTTGGATACAAAGTACTATGGATTCTCATTGCTCCAAACTGATCAATATACATCAGTTGCACAAAGCTTTGTGTCCAATGACGGTGTGAGCAATCTCAGAGGCAGAGTTCTAGGTGGAGCATCTGCTATAAATGGCGGGTTTTACAGCAGAGCAAGTGAGGATTTTGTCGAAAAGGTTGCGTGGGATAAGGAGACGGTAACAAATGCTTATCAATGGGTCGAATCTAGAGTCGTCTTTAAACCGGAACTGACCCCATGGCAGTATGCTGCTGAGTTCAGCTTTCTTGAGGCGGGGGTTTTCCCTTACAATGGTTTTAGTTTGGATCACATCAAGGGAACAAAGGTCGGTGCAAGTGTGTTTGATGAACAGGGAAGAAGACAAACCTCAGCTGATCTTCTAGAGGCAGGAAATCCGAACAATATCACAGTTCTTCTGAATGCAACTGTGAAGAATGTCATCTTTCACAGAAAAGGTGACAGAAATGAGACAATAGCTGGAGGCATACGATTCATCAAGAGCAACGGAAACTCGAGCGAAACTTATGAAGCTCACCTCAACCAGACAGAGAATTCATGCTCACGGGGTGATGTGATACTAGCGGCAGCGGCTCTAGGCAGTCCTCAGATTCTGTTGTCAAGTGCCATCGGCCCTCATCAACACCTAAAGAACTTCAACATCGAACTAGTTGTCGACTTAGATGGAAATGGCAGTAGCCACTTTGTGTTTGGCTTTCAGTTGTGGCATGGAAGTCTTGTTACAAGAGAAGACATGGTGACTGCCACAAGCAAAGTTGGAAGCAAGCAAGACTTGACTTTGTGGTTGCTTGCACACAATTGTGCATGTTGTATTTTATATGCATTAAATGACAAATGGAGAAAAGTTGTACTTTATAGACTAGAACCTCCAAAAGTTGTCGGTATAGCAGATGACTTCAAGATCATAATTGAGGCAGGAATTTCACCTGTCAGCTCCAATGCAACAGTAATGCCGATAGCTGCGAAACTCGCCTTTCCAGTATCAGAAGGAACGCTTGAGCTGATCAGCACCGACCCCAGAGAAAACCCTTCAGTCACATTCAACTATCTGGCAAATGAGAAAGATTTGGCAGAATGTGTGAAGCTGTCTCAGTTGCTTGAGCGAGTGGTAAGGTCTGAATCGGTCGCGTTCTTCCTGGGGATCGAATGCAAGCGAAAAGACGAGCTGATGTCTACAGAAGATGAGCTGAGAAAACTGTGCAAGAAGAATGTGAGGACTTTCTATCACTACCATGGAGGTTGCACCATGGGCTCAGTGGTTGACAAGGATTACAGGGTTTATGGAGTTAAGGGACTGAGAGTAGTTGATGGATCAACATTCTTTGAGTCACCGGGCACAAATCCAATGGCCACTTTGTTAATGCTTGGAAGATACCTAGGGATGAATATTCTTCAAGAGAGAGAAAATGCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0003674 GO:0003824 GO:0005488 GO:0005575 GO:0005576 GO:0006082 GO:0006629 GO:0006631 GO:0007154 GO:0007267 GO:0007275 GO:0008150 GO:0008152 GO:0009553 GO:0009987 GO:0010430 GO:0016829 GO:0016830 GO:0016832 GO:0019395 GO:0019752 GO:0023052 GO:0030258 GO:0032501 GO:0032502 GO:0032787 GO:0034440 GO:0036094 GO:0043167 GO:0043168 GO:0043436 GO:0044237 GO:0044238 GO:0044255 GO:0044281 GO:0046593 GO:0048037 GO:0048229 GO:0048856 GO:0050660 GO:0050662 GO:0055114 GO:0071704 GO:0097159 GO:1901265 GO:1901363

KEGG Pathways

Metabolic & Signaling

ko00260 ko01100 map00260 map01100

Pfam Domains

Protein Families

GMC_oxred_C GMC_oxred_N

Protein Analysis

563

Amino Acids

61.79

Weight (kDa)

5.95

Isoelectric Point (pI)

38.37

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GMC_oxred_N	PF00732	41 - 304	3.8e-15	GMC oxidoreductase
GMC_oxred_C	PF05199	418 - 548	1.5e-30	GMC oxidoreductase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0000426)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G14185 AT1G14190 AT1G14190
fragaria_vesca	FvH4_4g31240
malus_domestica	MD13G1071000.v1.1 MD13G1071100.v1.1 MD16G1071700.v1.1 MD16G1071800.v1.1
prunus_persica	Prupe.1G275800_v2.0.a1
pyrus_communis	pycom13g06360 pycom13g06370 pycom16g06200
rosa_chinensis	RchiOBHm_Chr1g0339361 RchiOBHm_Chr1g0339551 RchiOBHm_Chr4g0439631 RchiOBHm_Chr4g0439641 RchiOBHm_Chr4g0439661 RchiOBHm_Chr4g0439681 RchiOBHm_Chr5g0043441 RchiOBHm_Chr5g0076991
rosa_laevigata	RLG00000006247 RLG00000006249 RLG00000006250 RLG00000006251 RLG00000006252 RLG00000029228 RLG00000029236 RLG00000034187 RLG00000036640
rosa_multiflora	Rmu_co8382505.1_g000001 Rmu_co8503591.1_g000001 Rmu_sc0000613.1_g000004 Rmu_sc0000729.1_g000011 Rmu_sc0002549.1_g000002 Rmu_sc0002549.1_g000008 Rmu_sc0004655.1_g000021 Rmu_sc0005220.1_g000001 Rmu_sc0007322.1_g000009 Rmu_sc0008285.1_g000002 Rmu_sc0009495.1_g000002 Rmu_ssc0000067.1_g000054
rosa_roxburghii	Rroxscaffold_1G00005160 Rroxscaffold_1G00037450 Rroxscaffold_4G00313450 Rroxscaffold_4G00313520 Rroxscaffold_5G00380580 Rroxscaffold_5G00380590
rosa_rugosa	Rorug01G0141000.1 Rorug01G0142300.1 Rorug01G0142400.1 Rorug04G0320400 Rorug04G0320500 Rorug04G0320500 Rorug04G0320800 Rorug04G0320900 Rorug05G0205800 Rorug05G0449900
rosa_samantha	Rh1AG158500 Rh1AG159100 Rh1BG126000 Rh1CG108300 Rh1CG147800 Rh1CG148300 Rh1DG116900 Rh4AG371400 Rh4AG371500 Rh4AG371600 Rh4AG371700 Rh4BG383200 Rh4BG383300 Rh4BG383400 Rh4BG383700 Rh4CG397800 Rh4CG398000 Rh4CG398100 Rh4CG398400 Rh4DG378000 Rh4DG378100 Rh4DG378200 Rh5AG291600 Rh5AG454300 Rh5AG504700 Rh5BG298300 Rh5BG526400 Rh5CG327800 Rh5CG550200 Rh5DG307600 Rh5DG538500
rosa_wichuraiana	Rw1G013210 Rw1G013570 Rw4G031660 Rw4G031680 Rw4G031690 Rw4G031710 Rw5G027060 Rw5G047170

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	131
AccI	GTMKAC	2 cut(s)	930, 1448
AccII	CGCG	1 cut(s)	1403
AciI	CCGC	4 cut(s)	375, 530, 839, 845
AclWI	GGATC	4 cut(s)	223, 570, 1424, 1594
AcoI	YGGCCR	1 cut(s)	1623
AcsI	RAATTY	3 cut(s)	185, 808, 1194
AcuI	CTGAAG	2 cut(s)	75, 1290
AdeI	CACNNNGTG	2 cut(s)	824, 961
AfaI	GTAC	2 cut(s)	254, 1125
AfiI	CCNNNNNNNGG	1 cut(s)	548
AgsI	TTSAA	5 cut(s)	65, 913, 1174, 1318, 1670
AhlI	ACTAGT	1 cut(s)	922
AjnI	CCWGG	1 cut(s)	1410
AleI	CACNNNNGTG	1 cut(s)	1074
Alw21I	GWGCWC	1 cut(s)	198
Alw26I	GTCTC	3 cut(s)	425, 719, 1368
AlwI	GGATC	4 cut(s)	223, 570, 1424, 1594
AlwNI	CAGNNNCTG	1 cut(s)	868
Ama87I	CYCGRG	1 cut(s)	769
AoxI	GGCC	2 cut(s)	886, 1623
ApeKI	GCWGC	4 cut(s)	167, 506, 842, 1235
ApoI	RAATTY	3 cut(s)	185, 808, 1194
ArsI	GACNNNNNNTTYG	4 cut(s)	453, 485, 912, 944
AspA2I	CCTAGG	1 cut(s)	1651
AspS9I	GGNCC	1 cut(s)	887
AsuC2I	CCSGG	1 cut(s)	1608
AsuHPI	GGTGA	7 cut(s)	210, 725, 782, 836, 1024, 1191, 1596
AvaI	CYCGRG	1 cut(s)	769
AvrII	CCTAGG	1 cut(s)	1651
BaeGI	GKGCMC	2 cut(s)	81, 1613
BalI	TGGCCA	1 cut(s)	1625
BanII	GRGCYC	1 cut(s)	1529
BarI	GAAGNNNNNNTAC	2 cut(s)	979, 1011
BbsI	GAAGAC	2 cut(s)	622, 1011
Bbv12I	GWGCWC	1 cut(s)	198
BbvCI	CCTCAGC	1 cut(s)	625
BbvI	GCAGC	4 cut(s)	154, 493, 854, 1222
BccI	CCATC	3 cut(s)	890, 932, 1577
BcgI	CGANNNNNNTGC	6 cut(s)	103, 137, 159, 193, 398, 432
BciT130I	CCWGG	1 cut(s)	1412
BciVI	GTATCC	1 cut(s)	238
BclI	TGATCA	2 cut(s)	280, 1278
BcnI	CCSGG	1 cut(s)	1608
BcoDI	GTCTC	3 cut(s)	425, 719, 1368
BcuI	ACTAGT	1 cut(s)	922
BfaI	CTAG	9 cut(s)	164, 350, 465, 638, 836, 851, 923, 1136, 1652
BfmI	CTRYAG	1 cut(s)	1449
BfuI	GTATCC	1 cut(s)	238
BisI	GCNGC	6 cut(s)	168, 507, 840, 843, 846, 1236
BlnI	CCTAGG	1 cut(s)	1651
BlsI	GCNGC	6 cut(s)	169, 508, 841, 844, 847, 1237
BmcAI	AGTACT	1 cut(s)	254
Bme1390I	CCNGG	2 cut(s)	1412, 1608
BmeT110I	CYCGRG	1 cut(s)	769
BmgT120I	GGNCC	1 cut(s)	887
BmrFI	CCNGG	2 cut(s)	1412, 1608
BmsI	GCATC	1 cut(s)	368
BpiI	GAAGAC	2 cut(s)	622, 1011
BplI	GAGNNNNNCTC	2 cut(s)	173, 205
BpmI	CTGGAG	1 cut(s)	756
Bpu10I	CCTNAGC	1 cut(s)	625
BpuEI	CTTGAG	3 cut(s)	545, 1292, 1394
BpuMI	CCSGG	1 cut(s)	1608
BsaJI	CCNNGG	6 cut(s)	234, 494, 1411, 1507, 1521, 1651
BsaWI	WCCGGW	1 cut(s)	481
Bsc4I	CCNNNNNNNGG	1 cut(s)	548
Bse118I	RCCGGY	1 cut(s)	152
Bse1I	ACTGG	1 cut(s)	1253
Bse3DI	GCAATG	1 cut(s)	266
BseBI	CCWGG	1 cut(s)	1412
BseDI	CCNNGG	6 cut(s)	234, 494, 1411, 1507, 1521, 1651
BseGI	GGATG	1 cut(s)	1662
BseLI	CCNNNNNNNGG	1 cut(s)	548
BseMI	GCAATG	1 cut(s)	266
BseMII	CTCAG	9 cut(s)	204, 349, 501, 639, 875, 1379, 1454, 1542, 1562
BseNI	ACTGG	1 cut(s)	1253
BseRI	GAGGAG	2 cut(s)	156, 225
BseSI	GKGCMC	2 cut(s)	81, 1613
BseXI	GCAGC	4 cut(s)	154, 493, 854, 1222
Bsh1236I	CGCG	1 cut(s)	1403
Bsh1285I	CGRYCG	1 cut(s)	1401
BshFI	GGCC	2 cut(s)	888, 1625
BsiEI	CGRYCG	1 cut(s)	1401
BsiHKAI	GWGCWC	1 cut(s)	198
BsiHKCI	CYCGRG	1 cut(s)	769
BsiSI	CCGG	3 cut(s)	153, 482, 1607
BslFI	GGGAC	2 cut(s)	144, 1581
BslI	CCNNNNNNNGG	1 cut(s)	548
BsmAI	GTCTC	3 cut(s)	425, 719, 1368
BsmBI	CGTCTC	1 cut(s)	425
BsmFI	GGGAC	2 cut(s)	144, 1581
BsmI	GAATGC	2 cut(s)	682, 1427
BsnI	GGCC	2 cut(s)	888, 1625
BsoBI	CYCGRG	1 cut(s)	769
Bsp1286I	GDGCHC	4 cut(s)	81, 198, 1529, 1613
Bsp143I	GATC	8 cut(s)	215, 280, 562, 631, 1176, 1278, 1416, 1586
Bsp19I	CCATGG	3 cut(s)	494, 1507, 1521
BspACI	CCGC	4 cut(s)	375, 530, 839, 845
BspANI	GGCC	2 cut(s)	888, 1625
BspCNI	CTCAG	9 cut(s)	203, 348, 502, 638, 874, 1378, 1455, 1541, 1563
BspFNI	CGCG	1 cut(s)	1403
BspPI	GGATC	4 cut(s)	223, 570, 1424, 1594
BsrDI	GCAATG	1 cut(s)	266
BsrFI	RCCGGY	1 cut(s)	152
BsrI	ACTGG	1 cut(s)	1253
BssAI	RCCGGY	1 cut(s)	152
BssECI	CCNNGG	6 cut(s)	234, 494, 1411, 1507, 1521, 1651
BssMI	GATC	8 cut(s)	215, 280, 562, 631, 1176, 1278, 1416, 1586
BssT1I	CCWWGG	5 cut(s)	234, 494, 1507, 1521, 1651
Bst2UI	CCWGG	1 cut(s)	1412
Bst4CI	ACNGT	7 cut(s)	76, 323, 436, 667, 685, 1222, 1473
BstC8I	GCNNGC	4 cut(s)	154, 1040, 1065, 1427
BstDSI	CCRYGG	3 cut(s)	494, 1507, 1521
BstF5I	GGATG	1 cut(s)	1662
BstFNI	CGCG	1 cut(s)	1403
BstKTI	GATC	8 cut(s)	218, 283, 565, 634, 1179, 1281, 1419, 1589
BstMAI	GTCTC	3 cut(s)	425, 719, 1368
BstMBI	GATC	8 cut(s)	215, 280, 562, 631, 1176, 1278, 1416, 1586
BstMCI	CGRYCG	1 cut(s)	1401
BstMWI	GCNNNNNNNGC	4 cut(s)	153, 845, 1244, 1524
BstNI	CCWGG	1 cut(s)	1412
BstNSI	RCATGY	1 cut(s)	1083
BstSCI	CCNGG	2 cut(s)	1410, 1606
BstSFI	CTRYAG	1 cut(s)	1449
BstSLI	GKGCMC	2 cut(s)	81, 1613
BstUI	CGCG	1 cut(s)	1403
BstV1I	GCAGC	4 cut(s)	154, 493, 854, 1222
BstV2I	GAAGAC	2 cut(s)	622, 1011
BsuI	GTATCC	1 cut(s)	238
BsuRI	GGCC	2 cut(s)	888, 1625
BtgI	CCRYGG	3 cut(s)	494, 1507, 1521
BtsCI	GGATG	1 cut(s)	1662
BtsI	GCAGTG	1 cut(s)	147
BtsIMutI	CAGTG	4 cut(s)	81, 147, 198, 1536
Cac8I	GCNNGC	4 cut(s)	154, 1040, 1065, 1427
CaiI	CAGNNNCTG	1 cut(s)	868
Cfr10I	RCCGGY	1 cut(s)	152
Cfr13I	GGNCC	1 cut(s)	887
Csp6I	GTAC	2 cut(s)	253, 1124
CviAII	CATG	8 cut(s)	57, 495, 813, 983, 1009, 1080, 1508, 1522
CviQI	GTAC	2 cut(s)	253, 1124
DpnI	GATC	8 cut(s)	217, 282, 564, 633, 1178, 1280, 1418, 1588
DpnII	GATC	8 cut(s)	215, 280, 562, 631, 1176, 1278, 1416, 1586
DraI	TTTAAA	1 cut(s)	478
DraIII	CACNNNGTG	2 cut(s)	824, 961
DrdI	GACNNNNNNGTC	1 cut(s)	131
DseDI	GACNNNNNNGTC	1 cut(s)	131
EaeI	YGGCCR	1 cut(s)	1623
Eco130I	CCWWGG	5 cut(s)	234, 494, 1507, 1521, 1651
Eco24I	GRGCYC	1 cut(s)	1529
Eco57I	CTGAAG	2 cut(s)	75, 1290
Eco88I	CYCGRG	1 cut(s)	769
EcoRI	GAATTC	1 cut(s)	808
EcoRII	CCWGG	1 cut(s)	1410
EcoT14I	CCWWGG	5 cut(s)	234, 494, 1507, 1521, 1651
EcoT22I	ATGCAT	1 cut(s)	1099
EcoT38I	GRGCYC	1 cut(s)	1529
ErhI	CCWWGG	5 cut(s)	234, 494, 1507, 1521, 1651
Esp3I	CGTCTC	1 cut(s)	425
FaeI	CATG	8 cut(s)	60, 498, 816, 986, 1012, 1083, 1511, 1525
FalI	AAGNNNNNCTT	6 cut(s)	1031, 1063, 1110, 1142, 1254, 1286
FaqI	GGGAC	2 cut(s)	144, 1581
FatI	CATG	8 cut(s)	56, 494, 812, 982, 1008, 1079, 1507, 1521
FauI	CCCGC	2 cut(s)	368, 523
FauNDI	CATATG	2 cut(s)	84, 223
FbaI	TGATCA	2 cut(s)	280, 1278
FblI	GTMKAC	2 cut(s)	930, 1448
Fnu4HI	GCNGC	6 cut(s)	168, 507, 840, 843, 846, 1236
FokI	GGATG	1 cut(s)	1669
FriOI	GRGCYC	1 cut(s)	1529
Fsp4HI	GCNGC	6 cut(s)	168, 507, 840, 843, 846, 1236
FspBI	CTAG	9 cut(s)	164, 350, 465, 638, 836, 851, 923, 1136, 1652
GluI	GCNGC	6 cut(s)	168, 507, 840, 843, 846, 1236
GsuI	CTGGAG	1 cut(s)	756
HaeIII	GGCC	2 cut(s)	888, 1625
HapII	CCGG	3 cut(s)	153, 482, 1607
Hin1II	CATG	8 cut(s)	60, 498, 816, 986, 1012, 1083, 1511, 1525
HincII	GTYRAC	2 cut(s)	931, 1537
HindII	GTYRAC	2 cut(s)	931, 1537
HindIII	AAGCTT	1 cut(s)	304
HinfI	GANTC	8 cut(s)	61, 261, 461, 468, 747, 865, 1394, 1601
HpaII	CCGG	3 cut(s)	153, 482, 1607
HphI	GGTGA	7 cut(s)	210, 725, 782, 836, 1024, 1191, 1596
Hpy166II	GTNNAC	3 cut(s)	931, 1449, 1537
Hpy188I	TCNGA	8 cut(s)	94, 181, 338, 654, 675, 864, 1261, 1393
Hpy188III	TCNNGA	6 cut(s)	465, 524, 638, 754, 1174, 1670
Hpy8I	GTNNAC	3 cut(s)	931, 1449, 1537
HpyAV	CCTTC	3 cut(s)	130, 1256, 1314
HpyCH4III	ACNGT	7 cut(s)	76, 323, 436, 667, 685, 1222, 1473
HpyF10VI	GCNNNNNNNGC	4 cut(s)	153, 845, 1244, 1524
Hsp92II	CATG	8 cut(s)	60, 498, 816, 986, 1012, 1083, 1511, 1525
KroI	GCCGGC	1 cut(s)	152
KroNI	GCCGGC	1 cut(s)	154
Ksp22I	TGATCA	2 cut(s)	280, 1278
Kzo9I	GATC	8 cut(s)	215, 280, 562, 631, 1176, 1278, 1416, 1586
LmnI	GCTCC	3 cut(s)	276, 356, 1214
Lsp1109I	GCAGC	4 cut(s)	154, 493, 854, 1222
LweI	GCATC	1 cut(s)	368
MaeI	CTAG	9 cut(s)	164, 350, 465, 638, 836, 851, 923, 1136, 1652
MaeIII	GTNAC	6 cut(s)	436, 713, 994, 1012, 1309, 1602
MalI	GATC	8 cut(s)	217, 282, 564, 633, 1178, 1280, 1418, 1588
MboI	GATC	8 cut(s)	215, 280, 562, 631, 1176, 1278, 1416, 1586
MfeI	CAATTG	1 cut(s)	1072
MhlI	GDGCHC	4 cut(s)	81, 198, 1529, 1613
MlsI	TGGCCA	1 cut(s)	1625
MluCI	AATT	6 cut(s)	30, 185, 808, 1072, 1182, 1194
MluNI	TGGCCA	1 cut(s)	1625
MlyI	GAGTC	2 cut(s)	477, 1610
MmeI	TCCRAC	3 cut(s)	159, 222, 1012
Mox20I	TGGCCA	1 cut(s)	1625
Mph1103I	ATGCAT	1 cut(s)	1099
MroNI	GCCGGC	1 cut(s)	152
MscI	TGGCCA	1 cut(s)	1625
MseI	TTAA	5 cut(s)	477, 1100, 1563, 1634, 1687
MslI	CAYNNNNRTG	2 cut(s)	1074, 1506
Msp20I	TGGCCA	1 cut(s)	1625
MspA1I	CMGCKG	2 cut(s)	629, 845
MspI	CCGG	3 cut(s)	153, 482, 1607
MspR9I	CCNGG	2 cut(s)	1412, 1608
MunI	CAATTG	1 cut(s)	1072
Mva1269I	GAATGC	2 cut(s)	682, 1427
MvaI	CCWGG	1 cut(s)	1412
MvnI	CGCG	1 cut(s)	1403
MwoI	GCNNNNNNNGC	4 cut(s)	153, 845, 1244, 1524
NaeI	GCCGGC	1 cut(s)	154
NciI	CCSGG	1 cut(s)	1608
NcoI	CCATGG	3 cut(s)	494, 1507, 1521
NdeI	CATATG	2 cut(s)	84, 223
NdeII	GATC	8 cut(s)	215, 280, 562, 631, 1176, 1278, 1416, 1586
NgoMIV	GCCGGC	1 cut(s)	152
NlaIII	CATG	8 cut(s)	60, 498, 816, 986, 1012, 1083, 1511, 1525
NmuCI	GTSAC	4 cut(s)	713, 1012, 1309, 1602
NsiI	ATGCAT	1 cut(s)	1099
NspI	RCATGY	1 cut(s)	1083
OliI	CACNNNNGTG	1 cut(s)	1074
PaeR7I	CTCGAG	1 cut(s)	769
PctI	GAATGC	2 cut(s)	682, 1427
PdiI	GCCGGC	1 cut(s)	154
PfeI	GAWTC	6 cut(s)	61, 261, 461, 747, 865, 1394
PkrI	GCNGC	6 cut(s)	169, 508, 841, 844, 847, 1237
PleI	GAGTC	2 cut(s)	476, 1609
PpsI	GAGTC	2 cut(s)	476, 1609
Psp6I	CCWGG	1 cut(s)	1410
PspGI	CCWGG	1 cut(s)	1410
PspPI	GGNCC	1 cut(s)	887
PspXI	VCTCGAGB	1 cut(s)	769
PstNI	CAGNNNCTG	1 cut(s)	868
PvuII	CAGCTG	1 cut(s)	629
RsaI	GTAC	2 cut(s)	254, 1125
RsaNI	GTAC	2 cut(s)	253, 1124
RseI	CAYNNNNRTG	2 cut(s)	1074, 1506
SalI	GTCGAC	1 cut(s)	929
SaqAI	TTAA	5 cut(s)	477, 1100, 1563, 1634, 1687
SatI	GCNGC	6 cut(s)	168, 507, 840, 843, 846, 1236
Sau3AI	GATC	8 cut(s)	215, 280, 562, 631, 1176, 1278, 1416, 1586
Sau96I	GGNCC	1 cut(s)	887
ScaI	AGTACT	1 cut(s)	254
SchI	GAGTC	2 cut(s)	477, 1610
ScrFI	CCNGG	2 cut(s)	1412, 1608
SduI	GDGCHC	4 cut(s)	81, 198, 1529, 1613
SfaNI	GCATC	1 cut(s)	368
SfcI	CTRYAG	1 cut(s)	1449
Sfr274I	CTCGAG	1 cut(s)	769
SlaI	CTCGAG	1 cut(s)	769
SmiMI	CAYNNNNRTG	2 cut(s)	1074, 1506
SmlI	CTYRAG	4 cut(s)	524, 769, 1271, 1373
SmoI	CTYRAG	4 cut(s)	524, 769, 1271, 1373
SpeI	ACTAGT	1 cut(s)	922
Sse9I	AATT	6 cut(s)	30, 185, 808, 1072, 1182, 1194
SsiI	CCGC	4 cut(s)	375, 530, 839, 845
SspI	AATATT	1 cut(s)	1663
SspMI	CTAG	9 cut(s)	164, 350, 465, 638, 836, 851, 923, 1136, 1652
StyD4I	CCNGG	2 cut(s)	1410, 1606
StyI	CCWWGG	5 cut(s)	234, 494, 1507, 1521, 1651
TaaI	ACNGT	7 cut(s)	76, 323, 436, 667, 685, 1222, 1473
TaqI	TCGA	7 cut(s)	123, 408, 459, 770, 918, 930, 1419
TaqII	GACCGA	1 cut(s)	1387
TasI	AATT	6 cut(s)	30, 185, 808, 1072, 1182, 1194
TatI	WGTACW	2 cut(s)	252, 1123
TauI	GCSGC	2 cut(s)	842, 848
TfiI	GAWTC	6 cut(s)	61, 261, 461, 747, 865, 1394
Tru1I	TTAA	5 cut(s)	477, 1100, 1563, 1634, 1687
Tru9I	TTAA	5 cut(s)	477, 1100, 1563, 1634, 1687
TscAI	CASTG	4 cut(s)	81, 154, 198, 1536
TseFI	GTSAC	4 cut(s)	713, 1012, 1309, 1602
TseI	GCWGC	4 cut(s)	167, 506, 842, 1235
Tsp45I	GTSAC	4 cut(s)	713, 1012, 1309, 1602
TspDTI	ATGAA	7 cut(s)	45, 117, 618, 739, 798, 801, 1673
TspGWI	ACGGA	1 cut(s)	777
TspRI	CASTG	4 cut(s)	81, 154, 198, 1536
XapI	RAATTY	3 cut(s)	185, 808, 1194
XbaI	TCTAGA	2 cut(s)	464, 637
XceI	RCATGY	1 cut(s)	1083
XcmI	CCANNNNNNNNNTGG	2 cut(s)	962, 1528
XhoI	CTCGAG	1 cut(s)	769
XmaJI	CCTAGG	1 cut(s)	1651
XmiI	GTMKAC	2 cut(s)	930, 1448
XspI	CTAG	9 cut(s)	164, 350, 465, 638, 836, 851, 923, 1136, 1652
ZrmI	AGTACT	1 cut(s)	254
Zsp2I	ATGCAT	1 cut(s)	1099

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.