Rmu_co8503591.1_g000001

GMC oxidoreductase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_co8503591.1
Physical Location & Seq
Forward (+)
1 .. 1504
1504 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_co8503591.1_g000001.1.cds

Sequence Viewer

Length: 1413 bp
accttgtctgagaaattctcagtgctgttggtggaacgaggtggctcgccttatggagaccccttcatcttagagtcaaagcagtacggattctcattgctccaaactgatgaatatacatcagttgcacaaagctttgtctcgaaagatggcgtcagcaatctcagaggaagagtgctaggaggatcatctgctctcaatggtgggttttacagcagagcaagtgaagattttgtcgaaaaggttgggtgggataatggaggagtaacggatgcttatgaatgggtggagtctagaatcatctctaaacctgatttgactcattggtcgtatgtcgctgcctttagctttcttgaagctggaattttcccttacaatggtttcagtttggagcatattcagggcacaaagattggaggcagtttgttcgatgaacagggaagaagatacttatcagctgatcttctgcaggcaggaaatccaagcaatattacagttctcttgaatgcaacagtaaacaatgtcatctttcatacaaattgtactacagatgagaagatagctggaggtataagattcatcaagagcgatggcagctcaaacaggacttatgaagcttacctcaaccagccagacaactcgagttcatggggtgatgtgatactagcagcaggagctttgggcagccctcagattttgttattaagtggcattggccctcaagaacacctaaacaaatttgaagtcccgctagtactcgacttgaagggagttggagaaggaatgcgagacaatcctggtattgcaatcttggctgactccaagccgcaaaatcgaacaccagaacctccaaaagttgctggtattgcagatgacttcaaaatcataatcgaggcaggaattttacctattagtttcaatgcgacagtaattcccattgctgccaaaattgccttcccagaatcagtaggaaagcttgaactcaacagcactgacccaagagcaaacccatcagtgacattcaactacctatcaagcaagaaagaccgggcacaatgtgtgaagctgggtcagctgcttgagcgagttgtaaggtccgaatcaatcgccttctttctgggttcaaacgaacaccaaaacaagctgatgtctaccaaagatgagctcagaaaactctgcaagaagaatgtcagaaccttctaccactaccatggtggttgcacaatgggatcagtggtcgacaagagttatagggtttatggtgttaaaggattgaaagtgattgatgggtcaaccttcctggaatcaccaggcacaaacccaatggccactctgctcatgcttggaagatatcaagggatcaaaattcttcaggatagaaaagatgcttcttttatcaatcccagaacctga

Protein Analysis

470

Amino Acids

51.27

Weight (kDa)

6.65

Isoelectric Point (pI)

31.94

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000426)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G14185 AT1G14190 AT1G14190
fragaria_vesca FvH4_4g31240
malus_domestica MD13G1071000.v1.1 MD13G1071100.v1.1 MD16G1071700.v1.1 MD16G1071800.v1.1
prunus_persica Prupe.1G275800_v2.0.a1
pyrus_communis pycom13g06360 pycom13g06370 pycom16g06200
rosa_chinensis RchiOBHm_Chr1g0339361 RchiOBHm_Chr1g0339551 RchiOBHm_Chr4g0439631 RchiOBHm_Chr4g0439641 RchiOBHm_Chr4g0439661 RchiOBHm_Chr4g0439681 RchiOBHm_Chr5g0043441 RchiOBHm_Chr5g0076991
rosa_laevigata RLG00000006247 RLG00000006249 RLG00000006250 RLG00000006251 RLG00000006252 RLG00000029228 RLG00000029236 RLG00000034187 RLG00000036640
rosa_multiflora Rmu_co8382505.1_g000001 Rmu_co8503591.1_g000001 Rmu_sc0000613.1_g000004 Rmu_sc0000729.1_g000011 Rmu_sc0002549.1_g000002 Rmu_sc0002549.1_g000008 Rmu_sc0004655.1_g000021 Rmu_sc0005220.1_g000001 Rmu_sc0007322.1_g000009 Rmu_sc0008285.1_g000002 Rmu_sc0009495.1_g000002 Rmu_ssc0000067.1_g000054
rosa_roxburghii Rroxscaffold_1G00005160 Rroxscaffold_1G00037450 Rroxscaffold_4G00313450 Rroxscaffold_4G00313520 Rroxscaffold_5G00380580 Rroxscaffold_5G00380590
rosa_rugosa Rorug01G0141000.1 Rorug01G0142300.1 Rorug01G0142400.1 Rorug04G0320400 Rorug04G0320500 Rorug04G0320500 Rorug04G0320800 Rorug04G0320900 Rorug05G0205800 Rorug05G0449900
rosa_samantha Rh1AG158500 Rh1AG159100 Rh1BG126000 Rh1CG108300 Rh1CG147800 Rh1CG148300 Rh1DG116900 Rh4AG371400 Rh4AG371500 Rh4AG371600 Rh4AG371700 Rh4BG383200 Rh4BG383300 Rh4BG383400 Rh4BG383700 Rh4CG397800 Rh4CG398000 Rh4CG398100 Rh4CG398400 Rh4DG378000 Rh4DG378100 Rh4DG378200 Rh5AG291600 Rh5AG454300 Rh5AG504700 Rh5BG298300 Rh5BG526400 Rh5CG327800 Rh5CG550200 Rh5DG307600 Rh5DG538500
rosa_wichuraiana Rw1G013210 Rw1G013570 Rw4G031660 Rw4G031680 Rw4G031690 Rw4G031710 Rw5G027060 Rw5G047170

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 325
AccI GTMKAC 2 cut(s) 1151, 1239
AciI CCGC 2 cut(s) 749, 827
AclWI GGATC 3 cut(s) 193, 1237, 1367
AcoI YGGCCR 1 cut(s) 1326
AcsI RAATTY 5 cut(s) 14, 363, 737, 900, 1365
AcuI CTGAAG 1 cut(s) 1355
AcyI GRCGYC 1 cut(s) 153
AdeI CACNNNGTG 1 cut(s) 1058
AfaI GTAC 3 cut(s) 86, 544, 756
AfiI CCNNNNNNNGG 1 cut(s) 377
AjnI CCWGG 3 cut(s) 796, 1299, 1309
AjuI GAANNNNNNNTTGG 2 cut(s) 938, 970
Alw21I GWGCWC 1 cut(s) 1167
Alw26I GTCTC 3 cut(s) 51, 145, 783
AlwI GGATC 3 cut(s) 193, 1237, 1367
AlwNI CAGNNNCTG 1 cut(s) 1410
Ama87I CYCGRG 1 cut(s) 640
AoxI GGCC 2 cut(s) 715, 1326
ApeKI GCWGC 6 cut(s) 338, 594, 668, 684, 941, 1075
ApoI RAATTY 5 cut(s) 14, 363, 737, 900, 1365
ArsI GACNNNNNNTTYG 2 cut(s) 729, 761
AspS9I GGNCC 2 cut(s) 716, 1095
AsuC2I CCSGG 1 cut(s) 1049
AsuHPI GGTGA 2 cut(s) 665, 1299
AvaI CYCGRG 1 cut(s) 640
AvaII GGWCC 1 cut(s) 1095
BaeGI GKGCMC 2 cut(s) 407, 1054
BalI TGGCCA 1 cut(s) 1328
BanII GRGCYC 1 cut(s) 1167
Bbv12I GWGCWC 1 cut(s) 1167
BbvI GCAGC 6 cut(s) 325, 606, 680, 696, 928, 1062
BccI CCATC 4 cut(s) 143, 584, 1018, 1280
BcgI CGANNNNNNTGC 2 cut(s) 409, 443
BciT130I CCWGG 3 cut(s) 798, 1301, 1311
BcnI CCSGG 1 cut(s) 1049
BcoDI GTCTC 3 cut(s) 51, 145, 783
BfaI CTAG 4 cut(s) 179, 294, 665, 752
BfmI CTRYAG 2 cut(s) 467, 546
BisI GCNGC 7 cut(s) 339, 595, 669, 685, 827, 942, 1076
BlsI GCNGC 7 cut(s) 340, 596, 670, 686, 828, 943, 1077
BmcAI AGTACT 1 cut(s) 756
Bme1390I CCNGG 4 cut(s) 798, 1049, 1301, 1311
Bme18I GGWCC 1 cut(s) 1095
BmeT110I CYCGRG 1 cut(s) 640
BmgT120I GGNCC 2 cut(s) 716, 1095
BmrFI CCNGG 4 cut(s) 798, 1049, 1301, 1311
BmsI GCATC 2 cut(s) 262, 1375
BplI GAGNNNNNCTC 1 cut(s) 34
BpmI CTGGAG 1 cut(s) 585
BpuEI CTTGAG 2 cut(s) 705, 1100
BpuMI CCSGG 1 cut(s) 1049
BsaBI GATNNNNATC 1 cut(s) 451
BsaHI GRCGYC 1 cut(s) 153
BsaI GGTCTC 1 cut(s) 51
BsaJI CCNNGG 1 cut(s) 1210
Bsc4I CCNNNNNNNGG 1 cut(s) 377
Bse3DI GCAATG 2 cut(s) 95, 936
Bse8I GATNNNNATC 1 cut(s) 451
BseBI CCWGG 3 cut(s) 798, 1301, 1311
BseDI CCNNGG 1 cut(s) 1210
BseGI GGATG 1 cut(s) 277
BseJI GATNNNNATC 1 cut(s) 451
BseLI CCNNNNNNNGG 1 cut(s) 377
BseMI GCAATG 2 cut(s) 95, 936
BseMII CTCAG 4 cut(s) 33, 178, 704, 1180
BseRI GAGGAG 1 cut(s) 276
BseSI GKGCMC 2 cut(s) 407, 1054
BseXI GCAGC 6 cut(s) 325, 606, 680, 696, 928, 1062
BseYI CCCAGC 1 cut(s) 1066
BshFI GGCC 2 cut(s) 717, 1328
BsiHKAI GWGCWC 1 cut(s) 1167
BsiHKCI CYCGRG 1 cut(s) 640
BsiSI CCGG 1 cut(s) 1048
BslFI GGGAC 1 cut(s) 731
BslI CCNNNNNNNGG 1 cut(s) 377
BsmAI GTCTC 3 cut(s) 51, 145, 783
BsmFI GGGAC 1 cut(s) 731
BsmI GAATGC 2 cut(s) 511, 789
BsnI GGCC 2 cut(s) 717, 1328
Bso31I GGTCTC 1 cut(s) 51
BsoBI CYCGRG 1 cut(s) 640
Bsp1286I GDGCHC 3 cut(s) 407, 1054, 1167
Bsp143I GATC 4 cut(s) 185, 460, 1229, 1359
Bsp19I CCATGG 1 cut(s) 1210
BspACI CCGC 2 cut(s) 749, 827
BspANI GGCC 2 cut(s) 717, 1328
BspCNI CTCAG 4 cut(s) 32, 177, 703, 1179
BspMAI CTGCAG 1 cut(s) 471
BspPI GGATC 3 cut(s) 193, 1237, 1367
BspTNI GGTCTC 1 cut(s) 51
BsrDI GCAATG 2 cut(s) 95, 936
BssECI CCNNGG 1 cut(s) 1210
BssMI GATC 4 cut(s) 185, 460, 1229, 1359
BssNI GRCGYC 1 cut(s) 153
BssT1I CCWWGG 1 cut(s) 1210
Bst2UI CCWGG 3 cut(s) 798, 1301, 1311
Bst4CI ACNGT 3 cut(s) 496, 514, 928
Bst6I CTCTTC 1 cut(s) 166
BstACI GRCGYC 1 cut(s) 153
BstC8I GCNNGC 2 cut(s) 47, 471
BstDEI CTNAG 6 cut(s) 9, 19, 70, 164, 690, 1166
BstDSI CCRYGG 1 cut(s) 1210
BstF5I GGATG 1 cut(s) 277
BstKTI GATC 4 cut(s) 188, 463, 1232, 1362
BstMAI GTCTC 3 cut(s) 51, 145, 783
BstMBI GATC 4 cut(s) 185, 460, 1229, 1359
BstMWI GCNNNNNNNGC 7 cut(s) 594, 674, 812, 866, 950, 1072, 1081
BstNI CCWGG 3 cut(s) 798, 1301, 1311
BstSCI CCNGG 4 cut(s) 796, 1047, 1299, 1309
BstSFI CTRYAG 2 cut(s) 467, 546
BstSLI GKGCMC 2 cut(s) 407, 1054
BstV1I GCAGC 6 cut(s) 325, 606, 680, 696, 928, 1062
BstXI CCANNNNNNTGG 1 cut(s) 1211
BsuRI GGCC 2 cut(s) 717, 1328
BtgI CCRYGG 1 cut(s) 1210
BtgZI GCGATG 1 cut(s) 603
BtsCI GGATG 1 cut(s) 277
BtsIMutI CAGTG 4 cut(s) 27, 990, 1020, 1239
Cac8I GCNNGC 2 cut(s) 47, 471
CaiI CAGNNNCTG 1 cut(s) 1410
Cfr13I GGNCC 2 cut(s) 716, 1095
CseI GACGC 1 cut(s) 142
Csp6I GTAC 3 cut(s) 85, 543, 755
CviAII CATG 3 cut(s) 648, 1211, 1339
CviQI GTAC 3 cut(s) 85, 543, 755
DdeI CTNAG 6 cut(s) 9, 19, 70, 164, 690, 1166
DpnI GATC 4 cut(s) 187, 462, 1231, 1361
DpnII GATC 4 cut(s) 185, 460, 1229, 1359
DraIII CACNNNGTG 1 cut(s) 1058
DrdI GACNNNNNNGTC 1 cut(s) 325
DseDI GACNNNNNNGTC 1 cut(s) 325
EaeI YGGCCR 1 cut(s) 1326
Eam1104I CTCTTC 1 cut(s) 166
EarI CTCTTC 1 cut(s) 166
Ecl136II GAGCTC 1 cut(s) 1165
Eco130I CCWWGG 1 cut(s) 1210
Eco24I GRGCYC 1 cut(s) 1167
Eco31I GGTCTC 1 cut(s) 51
Eco32I GATATC 1 cut(s) 1352
Eco47I GGWCC 1 cut(s) 1095
Eco53kI GAGCTC 1 cut(s) 1165
Eco57I CTGAAG 1 cut(s) 1355
Eco88I CYCGRG 1 cut(s) 640
EcoICRI GAGCTC 1 cut(s) 1165
EcoRII CCWGG 3 cut(s) 796, 1299, 1309
EcoRV GATATC 1 cut(s) 1352
EcoT14I CCWWGG 1 cut(s) 1210
EcoT38I GRGCYC 1 cut(s) 1167
ErhI CCWWGG 1 cut(s) 1210
FaeI CATG 3 cut(s) 651, 1214, 1342
FaqI GGGAC 1 cut(s) 731
FatI CATG 3 cut(s) 647, 1210, 1338
FauI CCCGC 1 cut(s) 756
FblI GTMKAC 2 cut(s) 1151, 1239
Fnu4HI GCNGC 7 cut(s) 339, 595, 669, 685, 827, 942, 1076
FokI GGATG 1 cut(s) 284
FriOI GRGCYC 1 cut(s) 1167
Fsp4HI GCNGC 7 cut(s) 339, 595, 669, 685, 827, 942, 1076
FspBI CTAG 4 cut(s) 179, 294, 665, 752
GluI GCNGC 7 cut(s) 339, 595, 669, 685, 827, 942, 1076
GsaI CCCAGC 1 cut(s) 1070
GsuI CTGGAG 1 cut(s) 585
HaeIII GGCC 2 cut(s) 717, 1328
HapII CCGG 1 cut(s) 1048
HgaI GACGC 1 cut(s) 142
Hin1I GRCGYC 1 cut(s) 153
Hin1II CATG 3 cut(s) 651, 1214, 1342
HincII GTYRAC 2 cut(s) 1240, 1293
HindII GTYRAC 2 cut(s) 1240, 1293
HindIII AAGCTT 3 cut(s) 133, 615, 974
HpaII CCGG 1 cut(s) 1048
HphI GGTGA 2 cut(s) 665, 1299
Hpy166II GTNNAC 4 cut(s) 517, 1152, 1240, 1293
Hpy188I TCNGA 6 cut(s) 10, 167, 693, 1099, 1169, 1193
Hpy188III TCNNGA 7 cut(s) 142, 294, 353, 502, 583, 722, 1373
Hpy8I GTNNAC 4 cut(s) 517, 1152, 1240, 1293
HpyAV CCTTC 7 cut(s) 73, 760, 773, 964, 1120, 1207, 1306
HpyCH4III ACNGT 3 cut(s) 496, 514, 928
HpyCH4V TGCA 7 cut(s) 128, 469, 509, 806, 869, 1179, 1221
HpyF10VI GCNNNNNNNGC 7 cut(s) 594, 674, 812, 866, 950, 1072, 1081
HpyF3I CTNAG 6 cut(s) 9, 19, 70, 164, 690, 1166
Hsp92I GRCGYC 1 cut(s) 153
Hsp92II CATG 3 cut(s) 651, 1214, 1342
Kzo9I GATC 4 cut(s) 185, 460, 1229, 1359
LmnI GCTCC 3 cut(s) 105, 391, 674
Lsp1109I GCAGC 6 cut(s) 325, 606, 680, 696, 928, 1062
LweI GCATC 2 cut(s) 262, 1375
MaeI CTAG 4 cut(s) 179, 294, 665, 752
MaeIII GTNAC 2 cut(s) 265, 1015
MalI GATC 4 cut(s) 187, 462, 1231, 1361
MboI GATC 4 cut(s) 185, 460, 1229, 1359
MboII GAAGA 9 cut(s) 183, 239, 453, 455, 456, 568, 1195, 1359, 1361
MhlI GDGCHC 3 cut(s) 407, 1054, 1167
MlsI TGGCCA 1 cut(s) 1328
MluCI AATT 8 cut(s) 14, 363, 538, 737, 900, 930, 948, 1365
MluNI TGGCCA 1 cut(s) 1328
MlyI GAGTC 4 cut(s) 83, 299, 313, 812
MmeI TCCRAC 1 cut(s) 754
Mox20I TGGCCA 1 cut(s) 1328
MscI TGGCCA 1 cut(s) 1328
MseI TTAA 2 cut(s) 704, 1266
MslI CAYNNNNRTG 1 cut(s) 1209
Msp20I TGGCCA 1 cut(s) 1328
MspA1I CMGCKG 2 cut(s) 458, 1075
MspI CCGG 1 cut(s) 1048
MspR9I CCNGG 4 cut(s) 798, 1049, 1301, 1311
Mva1269I GAATGC 2 cut(s) 511, 789
MvaI CCWGG 3 cut(s) 798, 1301, 1311
MwoI GCNNNNNNNGC 7 cut(s) 594, 674, 812, 866, 950, 1072, 1081
NciI CCSGG 1 cut(s) 1049
NcoI CCATGG 1 cut(s) 1210
NdeII GATC 4 cut(s) 185, 460, 1229, 1359
NlaIII CATG 3 cut(s) 651, 1214, 1342
NmuCI GTSAC 1 cut(s) 1015
PaeR7I CTCGAG 1 cut(s) 640
PctI GAATGC 2 cut(s) 511, 789
PfeI GAWTC 6 cut(s) 90, 297, 576, 962, 1100, 1304
PfoI TCCNGGA 1 cut(s) 1299
PkrI GCNGC 7 cut(s) 340, 596, 670, 686, 828, 943, 1077
PleI GAGTC 4 cut(s) 82, 298, 313, 812
PpsI GAGTC 4 cut(s) 82, 298, 313, 812
Psp124BI GAGCTC 1 cut(s) 1167
Psp6I CCWGG 3 cut(s) 796, 1299, 1309
PspFI CCCAGC 1 cut(s) 1066
PspGI CCWGG 3 cut(s) 796, 1299, 1309
PspPI GGNCC 2 cut(s) 716, 1095
PspXI VCTCGAGB 1 cut(s) 640
PstI CTGCAG 1 cut(s) 471
PstNI CAGNNNCTG 1 cut(s) 1410
PvuII CAGCTG 2 cut(s) 458, 1075
RsaI GTAC 3 cut(s) 86, 544, 756
RsaNI GTAC 3 cut(s) 85, 543, 755
RseI CAYNNNNRTG 1 cut(s) 1209
SacI GAGCTC 1 cut(s) 1167
SalI GTCGAC 1 cut(s) 1238
SaqAI TTAA 2 cut(s) 704, 1266
SatI GCNGC 7 cut(s) 339, 595, 669, 685, 827, 942, 1076
Sau3AI GATC 4 cut(s) 185, 460, 1229, 1359
Sau96I GGNCC 2 cut(s) 716, 1095
ScaI AGTACT 1 cut(s) 756
SchI GAGTC 4 cut(s) 83, 299, 313, 812
ScrFI CCNGG 4 cut(s) 798, 1049, 1301, 1311
SduI GDGCHC 3 cut(s) 407, 1054, 1167
SfaNI GCATC 2 cut(s) 262, 1375
SfcI CTRYAG 2 cut(s) 467, 546
Sfr274I CTCGAG 1 cut(s) 640
SinI GGWCC 1 cut(s) 1095
SlaI CTCGAG 1 cut(s) 640
SmiMI CAYNNNNRTG 1 cut(s) 1209
SmlI CTYRAG 3 cut(s) 640, 720, 1079
SmoI CTYRAG 3 cut(s) 640, 720, 1079
Sse9I AATT 8 cut(s) 14, 363, 538, 737, 900, 930, 948, 1365
SsiI CCGC 2 cut(s) 749, 827
SspI AATATT 1 cut(s) 490
SspMI CTAG 4 cut(s) 179, 294, 665, 752
SstI GAGCTC 1 cut(s) 1167
StyD4I CCNGG 4 cut(s) 796, 1047, 1299, 1309
StyI CCWWGG 1 cut(s) 1210
TaaI ACNGT 3 cut(s) 496, 514, 928
TaqI TCGA 8 cut(s) 143, 237, 429, 641, 759, 835, 891, 1239
TasI AATT 8 cut(s) 14, 363, 538, 737, 900, 930, 948, 1365
TatI WGTACW 2 cut(s) 542, 754
TauI GCSGC 1 cut(s) 829
TfiI GAWTC 6 cut(s) 90, 297, 576, 962, 1100, 1304
Tru1I TTAA 2 cut(s) 704, 1266
Tru9I TTAA 2 cut(s) 704, 1266
TscAI CASTG 4 cut(s) 27, 997, 1020, 1239
TseFI GTSAC 1 cut(s) 1015
TseI GCWGC 6 cut(s) 338, 594, 668, 684, 941, 1075
Tsp45I GTSAC 1 cut(s) 1015
TspDTI ATGAA 8 cut(s) 55, 126, 294, 447, 521, 568, 627, 636
TspGWI ACGGA 2 cut(s) 102, 284
TspRI CASTG 4 cut(s) 27, 997, 1020, 1239
VpaK11BI GGWCC 1 cut(s) 1095
XapI RAATTY 5 cut(s) 14, 363, 737, 900, 1365
XbaI TCTAGA 1 cut(s) 293
XcmI CCANNNNNNNNNTGG 1 cut(s) 1211
XhoI CTCGAG 1 cut(s) 640
XmiI GTMKAC 2 cut(s) 1151, 1239
XspI CTAG 4 cut(s) 179, 294, 665, 752
ZrmI AGTACT 1 cut(s) 756
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.