Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr16

Orthogroup ID

OG0000426

Physical Location & Seq

Genomic Coordinates Forward (+)

5037852 .. 5039758

Gene Structure 1907 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD16G1071800.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1587 bp

ATGGCAATGGGGTTTTCATTGTATCTGTTCCTCCTGTTTGTTCATCTGGCCCTGTGTTGTTCATGCATTCAAGGACAAACACTCCCTCGTAAGACTACTTCAGATGTCAATCAAGTCTCGGGCAAGTCCTTCGATTACATTATTGTTGGAGGAGGCACCGCCGGCTGTCCCCTAGCCGCAACCCTGTCTGAGAAATTCTCGGTGCTCTTGGTTGAGCGAGGTGGCTCTCCGTATGAAAATCCCTTGATCATGGAAAACAAGAACTTCGGGCTCTCATTGGTCCAAACTGACGAGTACACATCAGTTGCACAAAGCTTCGTCTCCAAGGACGGGGTTTCCAATCTCCGAGGAAGAGTTCTAGGAGGAGGATCGGCTATCAACGGCGGGTTTTTCAGCAGAGCAAGTGAGGATTATGTCAAAAGGGTTGGGTGGAATAAGCAGATCGTATCGGACGCTTATAAATGGGTGGAGTCTAGAAATGCCTTTAAACCAAAACTAACCCCGTGGCCCTATGTTGCTGAGCTTAGCCTTCTTGAGGCAGGGATTTTCCCTTACAATGGTTTTAGTTTGGATCACATCGAGGGAACAAAGATTGGCGCGACTATTTATGATGAACAGGGGCGAAGACACAACTCAGCTGATCTTCTAATGGCAGGGAATCCGAACAACATCACACTTCTTTTGAATGCAACTGTGACAAGCATAATCTTTCATAAAAAAGGTAACAGAAATGTGACAGTTGTTCGAGGCATAAGATTCATCAAGAGCGACGGGAGTTCCTCGCAAACCCATGAAGCTTACCTCAACACACAGAACAACTCGAGGAGTTCAACAGGCGATGTGATACTAGCAGCAGGTGCTTTAGGCAGCCCTCAAATTCTATTGTTAAGTGGCATTGGCCCTCAGAAACACCTAAACAAGTTCGACATTCCAGTTGCAGTGAACTTAAAGAGCGTTGGAAAAGGAATGCAAGATAATCCTTCCATTGCACTCGTACCTGACGTAGCTGACGCGAAGCCCAAAAATTTCCCACCAGATTCTCCCAAAGTTATCGCCATTGCAGACGACTTCAAACTCATAGTTGGGTCAATGATTTTACCAATCAGCTTCAACGCAACAATAATGCTAATCTCAGGCAAACTTGCCTTCCCAGAATCAGAAGGACAGCTTGAGCTGAACAGCACCGACCCTCGGAAAAACCCTTCAGTCACATTCAACTATCTGGCAACGGAGAAAGATATGGCAGAATGCGTGAAGCTGGGTAGGTTGCTTGAGCAAATTGTAAGGTCTAAATCGATTGCTTACTTTCTTGGGGTCGAAGGCAAACGCAGAAACGAGTCCATGTCTACCGACGATGAGCTGAGAAAACTTTGCAAGAACAATGTGAGGACCTTCTACCACTATCATGGAGGTTGCACCATGGGATCAGTGGTTGACAAAAATTACAGGGTTTTCGGTGTCGAGGGATTGAGAGTAATTGACGGGTCAACTTTCCTGGAATCTCCGGGCACAAATCCAATGGCCACATTGTTAATGCTTGGAAGATACCAAGGGATCAAGATTCTTCAAGAGAGAGAAAATGCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0003674 GO:0003824 GO:0005488 GO:0005575 GO:0005576 GO:0006082 GO:0006629 GO:0006631 GO:0007154 GO:0007267 GO:0007275 GO:0008150 GO:0008152 GO:0009553 GO:0009987 GO:0010430 GO:0016829 GO:0016830 GO:0016832 GO:0019395 GO:0019752 GO:0023052 GO:0030258 GO:0032501 GO:0032502 GO:0032787 GO:0034440 GO:0036094 GO:0043167 GO:0043168 GO:0043436 GO:0044237 GO:0044238 GO:0044255 GO:0044281 GO:0046593 GO:0048037 GO:0048229 GO:0048856 GO:0050660 GO:0050662 GO:0055114 GO:0071704 GO:0097159 GO:1901265 GO:1901363

KEGG Pathways

Metabolic & Signaling

ko00260 ko01100 map00260 map01100

Pfam Domains

Protein Families

GMC_oxred_C GMC_oxred_N

Protein Analysis

529

Amino Acids

57.56

Weight (kDa)

8.84

Isoelectric Point (pI)

37.37

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GMC_oxred_N	PF00732	205 - 326	2.2e-09	GMC oxidoreductase
GMC_oxred_C	PF05199	384 - 514	2.6e-33	GMC oxidoreductase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000426)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G14185 AT1G14190 AT1G14190
fragaria_vesca	FvH4_4g31240
malus_domestica	MD13G1071000.v1.1 MD13G1071100.v1.1 MD16G1071700.v1.1 MD16G1071800.v1.1
prunus_persica	Prupe.1G275800_v2.0.a1
pyrus_communis	pycom13g06360 pycom13g06370 pycom16g06200
rosa_chinensis	RchiOBHm_Chr1g0339361 RchiOBHm_Chr1g0339551 RchiOBHm_Chr4g0439631 RchiOBHm_Chr4g0439641 RchiOBHm_Chr4g0439661 RchiOBHm_Chr4g0439681 RchiOBHm_Chr5g0043441 RchiOBHm_Chr5g0076991
rosa_laevigata	RLG00000006247 RLG00000006249 RLG00000006250 RLG00000006251 RLG00000006252 RLG00000029228 RLG00000029236 RLG00000034187 RLG00000036640
rosa_multiflora	Rmu_co8382505.1_g000001 Rmu_co8503591.1_g000001 Rmu_sc0000613.1_g000004 Rmu_sc0000729.1_g000011 Rmu_sc0002549.1_g000002 Rmu_sc0002549.1_g000008 Rmu_sc0004655.1_g000021 Rmu_sc0005220.1_g000001 Rmu_sc0007322.1_g000009 Rmu_sc0008285.1_g000002 Rmu_sc0009495.1_g000002 Rmu_ssc0000067.1_g000054
rosa_roxburghii	Rroxscaffold_1G00005160 Rroxscaffold_1G00037450 Rroxscaffold_4G00313450 Rroxscaffold_4G00313520 Rroxscaffold_5G00380580 Rroxscaffold_5G00380590
rosa_rugosa	Rorug01G0141000.1 Rorug01G0142300.1 Rorug01G0142400.1 Rorug04G0320400 Rorug04G0320500 Rorug04G0320500 Rorug04G0320800 Rorug04G0320900 Rorug05G0205800 Rorug05G0449900
rosa_samantha	Rh1AG158500 Rh1AG159100 Rh1BG126000 Rh1CG108300 Rh1CG147800 Rh1CG148300 Rh1DG116900 Rh4AG371400 Rh4AG371500 Rh4AG371600 Rh4AG371700 Rh4BG383200 Rh4BG383300 Rh4BG383400 Rh4BG383700 Rh4CG397800 Rh4CG398000 Rh4CG398100 Rh4CG398400 Rh4DG378000 Rh4DG378100 Rh4DG378200 Rh5AG291600 Rh5AG454300 Rh5AG504700 Rh5BG298300 Rh5BG526400 Rh5CG327800 Rh5CG550200 Rh5DG307600 Rh5DG538500
rosa_wichuraiana	Rw1G013210 Rw1G013570 Rw4G031660 Rw4G031680 Rw4G031690 Rw4G031710 Rw5G027060 Rw5G047170

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	459
AarI	CACCTGC	1 cut(s)	845
Acc36I	ACCTGC	1 cut(s)	845
AccB1I	GGYRCC	1 cut(s)	155
AccI	GTMKAC	1 cut(s)	1346
AccII	CGCG	2 cut(s)	599, 1013
AciI	CCGC	3 cut(s)	159, 177, 384
AclWI	GGATC	4 cut(s)	376, 579, 1432, 1562
AcoI	YGGCCR	1 cut(s)	1521
AcsI	RAATTY	3 cut(s)	194, 876, 1024
AcuI	CTGAAG	2 cut(s)	84, 1188
AfaI	GTAC	2 cut(s)	296, 996
AfiI	CCNNNNNNNGG	4 cut(s)	330, 535, 557, 1191
AgsI	TTSAA	7 cut(s)	71, 685, 831, 1072, 1111, 1216, 1568
AjnI	CCWGG	1 cut(s)	1494
Alw21I	GWGCWC	1 cut(s)	207
Alw26I	GTCTC	2 cut(s)	121, 325
AlwI	GGATC	4 cut(s)	376, 579, 1432, 1562
Ama87I	CYCGRG	2 cut(s)	118, 820
AoxI	GGCC	4 cut(s)	48, 506, 898, 1521
ApeKI	GCWGC	2 cut(s)	851, 867
ApoI	RAATTY	3 cut(s)	194, 876, 1024
AspLEI	GCGC	1 cut(s)	599
AspS9I	GGNCC	5 cut(s)	49, 280, 507, 899, 1389
AsuC2I	CCSGG	1 cut(s)	1506
AvaI	CYCGRG	2 cut(s)	118, 820
AvaII	GGWCC	2 cut(s)	280, 1389
BaeGI	GKGCMC	1 cut(s)	1511
BalI	TGGCCA	1 cut(s)	1523
BanI	GGYRCC	1 cut(s)	155
BanII	GRGCYC	1 cut(s)	273
BarI	GAAGNNNNNNTAC	2 cut(s)	82, 114
BbsI	GAAGAC	1 cut(s)	631
Bbv12I	GWGCWC	1 cut(s)	207
BbvI	GCAGC	2 cut(s)	863, 879
BceAI	ACGGC	1 cut(s)	397
BcgI	CGANNNNNNTGC	2 cut(s)	112, 146
BciT130I	CCWGG	1 cut(s)	1496
BclI	TGATCA	1 cut(s)	246
BcnI	CCSGG	1 cut(s)	1506
BcoDI	GTCTC	2 cut(s)	121, 325
BfaI	CTAG	4 cut(s)	173, 359, 474, 848
BfuAI	ACCTGC	1 cut(s)	845
BisI	GCNGC	3 cut(s)	177, 852, 868
BlpI	GCTNAGC	2 cut(s)	519, 524
BlsI	GCNGC	3 cut(s)	178, 853, 869
Bme1390I	CCNGG	2 cut(s)	1496, 1506
Bme18I	GGWCC	2 cut(s)	280, 1389
BmeT110I	CYCGRG	2 cut(s)	118, 820
BmgT120I	GGNCC	5 cut(s)	49, 280, 507, 899, 1389
BmiI	GGNNCC	1 cut(s)	157
BmrFI	CCNGG	2 cut(s)	1496, 1506
BpiI	GAAGAC	1 cut(s)	631
BplI	GAGNNNNNCTC	2 cut(s)	182, 214
Bpu1102I	GCTNAGC	2 cut(s)	519, 524
BpuEI	CTTGAG	3 cut(s)	554, 1190, 1292
BpuMI	CCSGG	1 cut(s)	1506
Bsa29I	ATCGAT	1 cut(s)	1295
BsaBI	GATNNNNATC	1 cut(s)	108
BsaJI	CCNNGG	6 cut(s)	324, 346, 503, 1190, 1419, 1549
BsaXI	ACNNNNNCTCC	2 cut(s)	66, 96
Bsc4I	CCNNNNNNNGG	4 cut(s)	330, 535, 557, 1191
Bse118I	RCCGGY	1 cut(s)	161
Bse1I	ACTGG	1 cut(s)	932
Bse3DI	GCAATG	3 cut(s)	12, 984, 1056
Bse8I	GATNNNNATC	1 cut(s)	108
BseBI	CCWGG	1 cut(s)	1496
BseCI	ATCGAT	1 cut(s)	1295
BseDI	CCNNGG	6 cut(s)	324, 346, 503, 1190, 1419, 1549
BseJI	GATNNNNATC	1 cut(s)	108
BseLI	CCNNNNNNNGG	4 cut(s)	330, 535, 557, 1191
BseMI	GCAATG	3 cut(s)	12, 984, 1056
BseMII	CTCAG	6 cut(s)	180, 510, 648, 917, 1146, 1352
BseNI	ACTGG	1 cut(s)	932
BseRI	GAGGAG	3 cut(s)	165, 378, 838
BseSI	GKGCMC	1 cut(s)	1511
BseXI	GCAGC	2 cut(s)	863, 879
BseYI	CCCAGC	1 cut(s)	1258
Bsh1236I	CGCG	2 cut(s)	599, 1013
BshFI	GGCC	4 cut(s)	50, 508, 900, 1523
BshNI	GGYRCC	1 cut(s)	155
BshVI	ATCGAT	1 cut(s)	1295
BsiHKAI	GWGCWC	1 cut(s)	207
BsiHKCI	CYCGRG	2 cut(s)	118, 820
BsiSI	CCGG	2 cut(s)	162, 1505
BslFI	GGGAC	1 cut(s)	153
BslI	CCNNNNNNNGG	4 cut(s)	330, 535, 557, 1191
BsmAI	GTCTC	2 cut(s)	121, 325
BsmBI	CGTCTC	1 cut(s)	325
BsmFI	GGGAC	1 cut(s)	153
BsmI	GAATGC	4 cut(s)	66, 691, 972, 1253
BsnI	GGCC	4 cut(s)	50, 508, 900, 1523
BsoBI	CYCGRG	2 cut(s)	118, 820
Bsp1286I	GDGCHC	3 cut(s)	207, 273, 1511
Bsp143I	GATC	7 cut(s)	246, 368, 441, 571, 640, 1424, 1554
Bsp1720I	GCTNAGC	2 cut(s)	519, 524
Bsp19I	CCATGG	1 cut(s)	1419
BspACI	CCGC	3 cut(s)	159, 177, 384
BspANI	GGCC	4 cut(s)	50, 508, 900, 1523
BspCNI	CTCAG	6 cut(s)	181, 511, 647, 916, 1145, 1353
BspDI	ATCGAT	1 cut(s)	1295
BspFNI	CGCG	2 cut(s)	599, 1013
BspLI	GGNNCC	1 cut(s)	157
BspMI	ACCTGC	1 cut(s)	845
BspPI	GGATC	4 cut(s)	376, 579, 1432, 1562
BspT107I	GGYRCC	1 cut(s)	155
BsrDI	GCAATG	3 cut(s)	12, 984, 1056
BsrFI	RCCGGY	1 cut(s)	161
BsrI	ACTGG	1 cut(s)	932
BssAI	RCCGGY	1 cut(s)	161
BssECI	CCNNGG	6 cut(s)	324, 346, 503, 1190, 1419, 1549
BssMI	GATC	7 cut(s)	246, 368, 441, 571, 640, 1424, 1554
BssT1I	CCWWGG	3 cut(s)	324, 1419, 1549
Bst2UI	CCWGG	1 cut(s)	1496
Bst4CI	ACNGT	2 cut(s)	694, 739
Bst6I	CTCTTC	1 cut(s)	346
BstAPI	GCANNNNNTGC	1 cut(s)	857
BstC8I	GCNNGC	1 cut(s)	163
BstDEI	CTNAG	7 cut(s)	189, 519, 524, 634, 903, 1132, 1361
BstDSI	CCRYGG	2 cut(s)	503, 1419
BstENI	CCTNNNNNAGG	1 cut(s)	533
BstFNI	CGCG	2 cut(s)	599, 1013
BstHHI	GCGC	1 cut(s)	599
BstKTI	GATC	7 cut(s)	249, 371, 444, 574, 643, 1427, 1557
BstMAI	GTCTC	2 cut(s)	121, 325
BstMBI	GATC	7 cut(s)	246, 368, 441, 571, 640, 1424, 1554
BstMWI	GCNNNNNNNGC	2 cut(s)	162, 857
BstNI	CCWGG	1 cut(s)	1496
BstSCI	CCNGG	2 cut(s)	1494, 1504
BstSLI	GKGCMC	1 cut(s)	1511
BstUI	CGCG	2 cut(s)	599, 1013
BstV1I	GCAGC	2 cut(s)	863, 879
BstV2I	GAAGAC	1 cut(s)	631
BstXI	CCANNNNNNTGG	1 cut(s)	1406
Bsu15I	ATCGAT	1 cut(s)	1295
BsuRI	GGCC	4 cut(s)	50, 508, 900, 1523
BsuTUI	ATCGAT	1 cut(s)	1295
BtgI	CCRYGG	2 cut(s)	503, 1419
BtgZI	GCGATG	1 cut(s)	852
BtsI	GCAGTG	1 cut(s)	945
BtsIMutI	CAGTG	2 cut(s)	945, 1434
BveI	ACCTGC	1 cut(s)	845
Cac8I	GCNNGC	1 cut(s)	163
CfoI	GCGC	1 cut(s)	599
Cfr10I	RCCGGY	1 cut(s)	161
Cfr13I	GGNCC	5 cut(s)	49, 280, 507, 899, 1389
ClaI	ATCGAT	1 cut(s)	1295
CseI	GACGC	2 cut(s)	461, 1019
Csp6I	GTAC	2 cut(s)	295, 995
CviAII	CATG	6 cut(s)	63, 250, 791, 1342, 1406, 1420
CviQI	GTAC	2 cut(s)	295, 995
DdeI	CTNAG	7 cut(s)	189, 519, 524, 634, 903, 1132, 1361
DpnI	GATC	7 cut(s)	248, 370, 443, 573, 642, 1426, 1556
DpnII	GATC	7 cut(s)	246, 368, 441, 571, 640, 1424, 1554
DraI	TTTAAA	1 cut(s)	487
EaeI	YGGCCR	1 cut(s)	1521
Eam1104I	CTCTTC	1 cut(s)	346
EarI	CTCTTC	1 cut(s)	346
Eco130I	CCWWGG	3 cut(s)	324, 1419, 1549
Eco24I	GRGCYC	1 cut(s)	273
Eco47I	GGWCC	2 cut(s)	280, 1389
Eco57I	CTGAAG	2 cut(s)	84, 1188
Eco88I	CYCGRG	2 cut(s)	118, 820
EcoNI	CCTNNNNNAGG	1 cut(s)	533
EcoO109I	RGGNCCY	1 cut(s)	1389
EcoRII	CCWGG	1 cut(s)	1494
EcoT14I	CCWWGG	3 cut(s)	324, 1419, 1549
EcoT22I	ATGCAT	1 cut(s)	68
EcoT38I	GRGCYC	1 cut(s)	273
ErhI	CCWWGG	3 cut(s)	324, 1419, 1549
Esp3I	CGTCTC	1 cut(s)	325
FaeI	CATG	6 cut(s)	66, 253, 794, 1345, 1409, 1423
FalI	AAGNNNNNCTT	2 cut(s)	1152, 1184
FaqI	GGGAC	1 cut(s)	153
FatI	CATG	6 cut(s)	62, 249, 790, 1341, 1405, 1419
FauI	CCCGC	1 cut(s)	377
FbaI	TGATCA	1 cut(s)	246
FblI	GTMKAC	1 cut(s)	1346
Fnu4HI	GCNGC	3 cut(s)	177, 852, 868
FriOI	GRGCYC	1 cut(s)	273
Fsp4HI	GCNGC	3 cut(s)	177, 852, 868
FspBI	CTAG	4 cut(s)	173, 359, 474, 848
GlaI	GCGC	1 cut(s)	598
GluI	GCNGC	3 cut(s)	177, 852, 868
GsaI	CCCAGC	1 cut(s)	1262
HaeIII	GGCC	4 cut(s)	50, 508, 900, 1523
HapII	CCGG	2 cut(s)	162, 1505
HgaI	GACGC	2 cut(s)	461, 1019
HhaI	GCGC	1 cut(s)	599
Hin1II	CATG	6 cut(s)	66, 253, 794, 1345, 1409, 1423
Hin6I	GCGC	1 cut(s)	597
HinP1I	GCGC	1 cut(s)	597
HincII	GTYRAC	2 cut(s)	1435, 1488
HindII	GTYRAC	2 cut(s)	1435, 1488
HindIII	AAGCTT	2 cut(s)	313, 795
HinfI	GANTC	8 cut(s)	470, 658, 756, 1037, 1154, 1337, 1499, 1561
HpaII	CCGG	2 cut(s)	162, 1505
Hpy166II	GTNNAC	5 cut(s)	297, 943, 1347, 1435, 1488
Hpy188I	TCNGA	8 cut(s)	103, 190, 347, 451, 663, 906, 1159, 1194
Hpy188III	TCNNGA	5 cut(s)	474, 533, 763, 1558, 1568
Hpy8I	GTNNAC	5 cut(s)	297, 943, 1347, 1435, 1488
Hpy99I	CGWCG	2 cut(s)	773, 1355
HpyAV	CCTTC	8 cut(s)	139, 539, 990, 1154, 1156, 1212, 1313, 1402
HpyCH4III	ACNGT	2 cut(s)	694, 739
HpyCH4IV	ACGT	1 cut(s)	1002
HpyCH4V	TGCA	9 cut(s)	66, 308, 689, 938, 970, 989, 1061, 1374, 1416
HpyF10VI	GCNNNNNNNGC	2 cut(s)	162, 857
HpyF3I	CTNAG	7 cut(s)	189, 519, 524, 634, 903, 1132, 1361
HpySE526I	ACGT	1 cut(s)	1002
Hsp92II	CATG	6 cut(s)	66, 253, 794, 1345, 1409, 1423
HspAI	GCGC	1 cut(s)	597
KroI	GCCGGC	1 cut(s)	161
KroNI	GCCGGC	1 cut(s)	163
Ksp22I	TGATCA	1 cut(s)	246
Kzo9I	GATC	7 cut(s)	246, 368, 441, 571, 640, 1424, 1554
Lsp1109I	GCAGC	2 cut(s)	863, 879
MaeI	CTAG	4 cut(s)	173, 359, 474, 848
MaeII	ACGT	1 cut(s)	1002
MaeIII	GTNAC	4 cut(s)	694, 722, 733, 1207
MalI	GATC	7 cut(s)	248, 370, 443, 573, 642, 1426, 1556
MboI	GATC	7 cut(s)	246, 368, 441, 571, 640, 1424, 1554
MboII	GAAGA	5 cut(s)	363, 635, 636, 1554, 1556
MhlI	GDGCHC	3 cut(s)	207, 273, 1511
MlsI	TGGCCA	1 cut(s)	1523
MluCI	AATT	6 cut(s)	194, 876, 1024, 1278, 1441, 1476
MluNI	TGGCCA	1 cut(s)	1523
MlyI	GAGTC	2 cut(s)	479, 1346
MmeI	TCCRAC	2 cut(s)	127, 937
Mox20I	TGGCCA	1 cut(s)	1523
Mph1103I	ATGCAT	1 cut(s)	68
MroNI	GCCGGC	1 cut(s)	161
MscI	TGGCCA	1 cut(s)	1523
MseI	TTAA	5 cut(s)	486, 887, 947, 1532, 1585
MslI	CAYNNNNRTG	1 cut(s)	1404
Msp20I	TGGCCA	1 cut(s)	1523
MspA1I	CMGCKG	1 cut(s)	638
MspI	CCGG	2 cut(s)	162, 1505
MspR9I	CCNGG	2 cut(s)	1496, 1506
Mva1269I	GAATGC	4 cut(s)	66, 691, 972, 1253
MvaI	CCWGG	1 cut(s)	1496
MvnI	CGCG	2 cut(s)	599, 1013
MwoI	GCNNNNNNNGC	2 cut(s)	162, 857
NaeI	GCCGGC	1 cut(s)	163
NciI	CCSGG	1 cut(s)	1506
NcoI	CCATGG	1 cut(s)	1419
NdeII	GATC	7 cut(s)	246, 368, 441, 571, 640, 1424, 1554
NgoMIV	GCCGGC	1 cut(s)	161
NlaIII	CATG	6 cut(s)	66, 253, 794, 1345, 1409, 1423
NlaIV	GGNNCC	1 cut(s)	157
NmuCI	GTSAC	3 cut(s)	694, 733, 1207
NsiI	ATGCAT	1 cut(s)	68
PaeR7I	CTCGAG	1 cut(s)	820
PaqCI	CACCTGC	1 cut(s)	845
PcsI	WCGNNNNNNNCGW	1 cut(s)	999
PctI	GAATGC	4 cut(s)	66, 691, 972, 1253
PdiI	GCCGGC	1 cut(s)	163
PfeI	GAWTC	6 cut(s)	658, 756, 1037, 1154, 1499, 1561
PfoI	TCCNGGA	1 cut(s)	1494
PkrI	GCNGC	3 cut(s)	178, 853, 869
PleI	GAGTC	2 cut(s)	478, 1345
PpsI	GAGTC	2 cut(s)	478, 1345
PpuMI	RGGWCCY	1 cut(s)	1389
PsiI	TTATAA	1 cut(s)	459
Psp5II	RGGWCCY	1 cut(s)	1389
Psp6I	CCWGG	1 cut(s)	1494
PspFI	CCCAGC	1 cut(s)	1258
PspGI	CCWGG	1 cut(s)	1494
PspN4I	GGNNCC	1 cut(s)	157
PspPI	GGNCC	5 cut(s)	49, 280, 507, 899, 1389
PspPPI	RGGWCCY	1 cut(s)	1389
PspXI	VCTCGAGB	1 cut(s)	820
PvuII	CAGCTG	1 cut(s)	638
RsaI	GTAC	2 cut(s)	296, 996
RsaNI	GTAC	2 cut(s)	295, 995
RseI	CAYNNNNRTG	1 cut(s)	1404
SaqAI	TTAA	5 cut(s)	486, 887, 947, 1532, 1585
SatI	GCNGC	3 cut(s)	177, 852, 868
Sau3AI	GATC	7 cut(s)	246, 368, 441, 571, 640, 1424, 1554
Sau96I	GGNCC	5 cut(s)	49, 280, 507, 899, 1389
SchI	GAGTC	2 cut(s)	479, 1346
ScrFI	CCNGG	2 cut(s)	1496, 1506
SduI	GDGCHC	3 cut(s)	207, 273, 1511
Sfr274I	CTCGAG	1 cut(s)	820
SinI	GGWCC	2 cut(s)	280, 1389
SlaI	CTCGAG	1 cut(s)	820
SmiMI	CAYNNNNRTG	1 cut(s)	1404
SmlI	CTYRAG	4 cut(s)	533, 820, 1169, 1271
SmoI	CTYRAG	4 cut(s)	533, 820, 1169, 1271
Sse9I	AATT	6 cut(s)	194, 876, 1024, 1278, 1441, 1476
SsiI	CCGC	3 cut(s)	159, 177, 384
SspMI	CTAG	4 cut(s)	173, 359, 474, 848
StyD4I	CCNGG	2 cut(s)	1494, 1504
StyI	CCWWGG	3 cut(s)	324, 1419, 1549
TaaI	ACNGT	2 cut(s)	694, 739
TaiI	ACGT	1 cut(s)	1005
TaqI	TCGA	8 cut(s)	132, 579, 745, 821, 924, 1295, 1317, 1461
TasI	AATT	6 cut(s)	194, 876, 1024, 1278, 1441, 1476
TatI	WGTACW	1 cut(s)	294
TauI	GCSGC	1 cut(s)	179
TfiI	GAWTC	6 cut(s)	658, 756, 1037, 1154, 1499, 1561
Tru1I	TTAA	5 cut(s)	486, 887, 947, 1532, 1585
Tru9I	TTAA	5 cut(s)	486, 887, 947, 1532, 1585
TscAI	CASTG	2 cut(s)	945, 1434
TseFI	GTSAC	3 cut(s)	694, 733, 1207
TseI	GCWGC	2 cut(s)	851, 867
Tsp45I	GTSAC	3 cut(s)	694, 733, 1207
TspDTI	ATGAA	8 cut(s)	6, 32, 51, 249, 627, 701, 748, 807
TspGWI	ACGGA	2 cut(s)	219, 1244
TspRI	CASTG	2 cut(s)	945, 1434
VpaK11BI	GGWCC	2 cut(s)	280, 1389
XagI	CCTNNNNNAGG	1 cut(s)	533
XapI	RAATTY	3 cut(s)	194, 876, 1024
XbaI	TCTAGA	1 cut(s)	473
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1426
XhoI	CTCGAG	1 cut(s)	820
XmiI	GTMKAC	1 cut(s)	1346
XspI	CTAG	4 cut(s)	173, 359, 474, 848
Zsp2I	ATGCAT	1 cut(s)	68

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.