Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr4

Orthogroup ID

OG0000426

Physical Location & Seq

Genomic Coordinates Forward (+)

58850786 .. 58853027

Gene Structure 2242 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw4G031690.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1587 bp

ATGATGATGGGGTTTTCATTGCATCTGTTGCTTCTATTTGTTCACTTGGCTATATGTTCTTCGGGGCAAACATTCCCCTATATGACTTCAAATGTCGAAGAAGTATCCGGTAGGTCCTTCGATTACATTGTGGTTGGCGGAGGCGCTGCCGGCTGCCCCCTAGCTGCAACGTTGTCTGAGAAATTCTCAGTGCTGTTGGTGGAACGAGGTGGCTCGCCTTACGGAGACCCCTTCATCTTAGAGCTGAGGTACTACGGATACCCATTTCTCGTAAGTGATGAATATACATCAGCTGCACAAAGCTTTGTCTCGACAGATGGTGTCCCCAATTTCAGAGGACGAGTGCTAGGAGGATCAGCTGCTATCAATGGTGGGTTTTACGGCAGAGCAAGTAAGGATTTTGTCAAAAAGGTTGGTTGGGATAATGAGGGAGTAAGGGATGCTTATGAATGGGTGGAATCTAGAATCATCACTAAACCTGATCATTTGACTCCATGGTCGAATGCTACTGCGCATAGCTTTGTTGAAGCTGGAATTCTCCCCTATAATGGTTTCAGTTTGGAGCATATTCGGGGAACAAAAATTGGTGCTACTTCATTCGATAACCAGGGAAGAAGACACTTACCAGCTGATCTTCTACCGGCAGGAAATCCAAGCAAGATCACAGTCCTCTTGAATGCAACTGTAGACAAAGTTATCTTTCAAAGAACTGGTACCAGAGATGAGAAGATAGCTCGAGGTATAAGATTCATCAAGAGCGATGGCAGCTCAAACCAGACTTATGAAGCTTACCTCAACCAGCCAGACAACTCGGGATCATGGGGTGATGTGATACTATCAGCAGGAGCTTTAGGCAGCCCTCAGATTTTGCTGTTAAGTGGCATTGGCCCTCAACAACACCTAAACAACTTTGAAATCCCGCTCGTACTCAACTTGAAGGGAGTAGGAGAAGGAATGCAAGACAATCCTGGTATTGCAATCTTTGTCAACTACAACCCGCAAAATCCAACACCAGAACATTCCAAAGCTGCTGGTATAGCAGATGACTTCAAAATCATAACCGAGGCAGGAATCGTACCTATTAGCTTGAATGGAACAACTTTCAGCTATTTCATTGGCAAAATTGCCTTCCCAGAATCAGTAGGGAAGCTTGAACTCAACAGCACTGATCCAAGAGCAAACCCATCAGTGACATTCAACTACCTATCAACCGAGAATGACTTGGCAGAATGTGTGAAGATGACCCAGCTGCTTGAGCTAGCTTTAAGGTCCAAATCAATTGCTTCCTTCGTGGGTTCGAATGAATACCAAAGCAAGCCGATGCCTACTGAAGACGAGCTCCAGGAACTCTGCAAGACGACTGTCGGTACTTTCTACCACTACCATGGTGGTTGCACTGTGGGGTCAGTGGTCGACAAGAATTATAGGGTTTATGGTGTTAAAGGCTTGAGGGTGATCGATGGGTCAACCTTCCTGGAATCACCAGGCACAAACCCAATGGCCACTGTGCTAATGCTTGGAAGATACCAAGGACTCAAAATTCTTCAAGAAAGAAAAGATGCTTCCTTTATCAATCCCAGAACCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0003674 GO:0003824 GO:0005488 GO:0005575 GO:0005576 GO:0006082 GO:0006629 GO:0006631 GO:0007154 GO:0007267 GO:0007275 GO:0008150 GO:0008152 GO:0009553 GO:0009987 GO:0010430 GO:0016829 GO:0016830 GO:0016832 GO:0019395 GO:0019752 GO:0023052 GO:0030258 GO:0032501 GO:0032502 GO:0032787 GO:0034440 GO:0036094 GO:0043167 GO:0043168 GO:0043436 GO:0044237 GO:0044238 GO:0044255 GO:0044281 GO:0046593 GO:0048037 GO:0048229 GO:0048856 GO:0050660 GO:0050662 GO:0055114 GO:0071704 GO:0097159 GO:1901265 GO:1901363

KEGG Pathways

Metabolic & Signaling

ko00260 ko01100 map00260 map01100

Pfam Domains

Protein Families

GMC_oxred_C GMC_oxred_N

Protein Analysis

528

Amino Acids

57.38

Weight (kDa)

5.86

Isoelectric Point (pI)

28.97

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GMC_oxred_N	PF00732	40 - 323	2.3e-14	GMC oxidoreductase
GMC_oxred_C	PF05199	378 - 507	1e-29	GMC oxidoreductase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Publication-ready

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Orthologous Genes (Group: OG0000426)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G14185 AT1G14190 AT1G14190
fragaria_vesca	FvH4_4g31240
malus_domestica	MD13G1071000.v1.1 MD13G1071100.v1.1 MD16G1071700.v1.1 MD16G1071800.v1.1
prunus_persica	Prupe.1G275800_v2.0.a1
pyrus_communis	pycom13g06360 pycom13g06370 pycom16g06200
rosa_chinensis	RchiOBHm_Chr1g0339361 RchiOBHm_Chr1g0339551 RchiOBHm_Chr4g0439631 RchiOBHm_Chr4g0439641 RchiOBHm_Chr4g0439661 RchiOBHm_Chr4g0439681 RchiOBHm_Chr5g0043441 RchiOBHm_Chr5g0076991
rosa_laevigata	RLG00000006247 RLG00000006249 RLG00000006250 RLG00000006251 RLG00000006252 RLG00000029228 RLG00000029236 RLG00000034187 RLG00000036640
rosa_multiflora	Rmu_co8382505.1_g000001 Rmu_co8503591.1_g000001 Rmu_sc0000613.1_g000004 Rmu_sc0000729.1_g000011 Rmu_sc0002549.1_g000002 Rmu_sc0002549.1_g000008 Rmu_sc0004655.1_g000021 Rmu_sc0005220.1_g000001 Rmu_sc0007322.1_g000009 Rmu_sc0008285.1_g000002 Rmu_sc0009495.1_g000002 Rmu_ssc0000067.1_g000054
rosa_roxburghii	Rroxscaffold_1G00005160 Rroxscaffold_1G00037450 Rroxscaffold_4G00313450 Rroxscaffold_4G00313520 Rroxscaffold_5G00380580 Rroxscaffold_5G00380590
rosa_rugosa	Rorug01G0141000.1 Rorug01G0142300.1 Rorug01G0142400.1 Rorug04G0320400 Rorug04G0320500 Rorug04G0320500 Rorug04G0320800 Rorug04G0320900 Rorug05G0205800 Rorug05G0449900
rosa_samantha	Rh1AG158500 Rh1AG159100 Rh1BG126000 Rh1CG108300 Rh1CG147800 Rh1CG148300 Rh1DG116900 Rh4AG371400 Rh4AG371500 Rh4AG371600 Rh4AG371700 Rh4BG383200 Rh4BG383300 Rh4BG383400 Rh4BG383700 Rh4CG397800 Rh4CG398000 Rh4CG398100 Rh4CG398400 Rh4DG378000 Rh4DG378100 Rh4DG378200 Rh5AG291600 Rh5AG454300 Rh5AG504700 Rh5BG298300 Rh5BG526400 Rh5CG327800 Rh5CG550200 Rh5DG307600 Rh5DG538500
rosa_wichuraiana	Rw1G013210 Rw1G013570 Rw4G031660 Rw4G031680 Rw4G031690 Rw4G031710 Rw5G027060 Rw5G047170

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	496
Acc16I	TGCGCA	1 cut(s)	513
Acc65I	GGTACC	1 cut(s)	713
AccB1I	GGYRCC	1 cut(s)	713
AccBSI	CCGCTC	1 cut(s)	922
AccI	GTMKAC	2 cut(s)	687, 1413
AciI	CCGC	3 cut(s)	138, 920, 998
AclI	AACGTT	1 cut(s)	170
AclWI	GGATC	3 cut(s)	361, 823, 1163
AcoI	YGGCCR	1 cut(s)	1500
AcsI	RAATTY	3 cut(s)	182, 534, 1539
AcuI	CTGAAG	1 cut(s)	1350
AfaI	GTAC	5 cut(s)	251, 715, 927, 1077, 1369
AfiI	CCNNNNNNNGG	1 cut(s)	548
AjnI	CCWGG	5 cut(s)	606, 967, 1341, 1473, 1483
Alw21I	GWGCWC	1 cut(s)	1341
Alw26I	GTCTC	2 cut(s)	219, 313
AlwI	GGATC	3 cut(s)	361, 823, 1163
Ama87I	CYCGRG	2 cut(s)	735, 811
AoxI	GGCC	2 cut(s)	886, 1500
ApeKI	GCWGC	9 cut(s)	146, 153, 164, 293, 359, 765, 855, 1028, 1249
ApoI	RAATTY	3 cut(s)	182, 534, 1539
Asp718I	GGTACC	1 cut(s)	713
AspLEI	GCGC	2 cut(s)	146, 514
AspS9I	GGNCC	3 cut(s)	114, 887, 1269
AsuHPI	GGTGA	3 cut(s)	836, 1465, 1473
AsuII	TTCGAA	1 cut(s)	1298
AsuNHI	GCTAGC	1 cut(s)	1258
AvaI	CYCGRG	2 cut(s)	735, 811
AvaII	GGWCC	2 cut(s)	114, 1269
BalI	TGGCCA	1 cut(s)	1502
BanI	GGYRCC	1 cut(s)	713
BanII	GRGCYC	1 cut(s)	1341
BbsI	GAAGAC	2 cut(s)	622, 1338
Bbv12I	GWGCWC	1 cut(s)	1341
BbvCI	CCTCAGC	1 cut(s)	245
BbvI	GCAGC	9 cut(s)	133, 140, 151, 280, 346, 777, 867, 1015, 1236
BccI	CCATC	4 cut(s)	311, 755, 1192, 1454
BceAI	ACGGC	1 cut(s)	397
BciT130I	CCWGG	5 cut(s)	608, 969, 1343, 1475, 1485
BciVI	GTATCC	2 cut(s)	115, 251
BclI	TGATCA	1 cut(s)	481
BcoDI	GTCTC	2 cut(s)	219, 313
BfaI	CTAG	4 cut(s)	161, 347, 462, 1259
BfmI	CTRYAG	1 cut(s)	684
BfoI	RGCGCY	1 cut(s)	147
BfuI	GTATCC	2 cut(s)	115, 251
BisI	GCNGC	9 cut(s)	147, 154, 165, 294, 360, 766, 856, 1029, 1250
BlsI	GCNGC	9 cut(s)	148, 155, 166, 295, 361, 767, 857, 1030, 1251
Bme1390I	CCNGG	5 cut(s)	608, 969, 1343, 1475, 1485
Bme18I	GGWCC	2 cut(s)	114, 1269
BmeT110I	CYCGRG	2 cut(s)	735, 811
BmgT120I	GGNCC	3 cut(s)	114, 887, 1269
BmiI	GGNNCC	1 cut(s)	715
BmrFI	CCNGG	5 cut(s)	608, 969, 1343, 1475, 1485
BmsI	GCATC	4 cut(s)	31, 430, 1311, 1549
BmtI	GCTAGC	1 cut(s)	1262
BoxI	GACNNNNGTC	1 cut(s)	1361
BpiI	GAAGAC	2 cut(s)	622, 1338
BplI	GAGNNNNNCTC	2 cut(s)	170, 202
BpmI	CTGGAG	1 cut(s)	1325
Bpu10I	CCTNAGC	1 cut(s)	245
Bpu14I	TTCGAA	1 cut(s)	1298
BpuEI	CTTGAG	2 cut(s)	1274, 1468
Bsa29I	ATCGAT	1 cut(s)	1458
BsaI	GGTCTC	1 cut(s)	219
BsaJI	CCNNGG	5 cut(s)	494, 607, 1062, 1384, 1528
BsaWI	WCCGGW	1 cut(s)	107
Bsc4I	CCNNNNNNNGG	1 cut(s)	548
Bse118I	RCCGGY	2 cut(s)	149, 640
Bse1I	ACTGG	1 cut(s)	715
Bse3DI	GCAATG	1 cut(s)	17
BseBI	CCWGG	5 cut(s)	608, 969, 1343, 1475, 1485
BseCI	ATCGAT	1 cut(s)	1458
BseDI	CCNNGG	5 cut(s)	494, 607, 1062, 1384, 1528
BseGI	GGATG	1 cut(s)	445
BseLI	CCNNNNNNNGG	1 cut(s)	548
BseMI	GCAATG	1 cut(s)	17
BseMII	CTCAG	4 cut(s)	168, 201, 236, 875
BseNI	ACTGG	1 cut(s)	715
BseXI	GCAGC	9 cut(s)	133, 140, 151, 280, 346, 777, 867, 1015, 1236
BseYI	CCCAGC	1 cut(s)	1245
BsgI	GTGCAG	1 cut(s)	279
BshFI	GGCC	2 cut(s)	888, 1502
BshNI	GGYRCC	1 cut(s)	713
BshVI	ATCGAT	1 cut(s)	1458
BsiHKAI	GWGCWC	1 cut(s)	1341
BsiHKCI	CYCGRG	2 cut(s)	735, 811
BsiSI	CCGG	3 cut(s)	108, 150, 641
BslFI	GGGAC	1 cut(s)	308
BslI	CCNNNNNNNGG	1 cut(s)	548
BsmAI	GTCTC	2 cut(s)	219, 313
BsmFI	GGGAC	1 cut(s)	308
BsmI	GAATGC	3 cut(s)	508, 682, 960
BsnI	GGCC	2 cut(s)	888, 1502
Bso31I	GGTCTC	1 cut(s)	219
BsoBI	CYCGRG	2 cut(s)	735, 811
Bsp119I	TTCGAA	1 cut(s)	1298
Bsp1286I	GDGCHC	1 cut(s)	1341
Bsp143I	GATC	7 cut(s)	353, 481, 631, 660, 815, 1168, 1455
Bsp19I	CCATGG	2 cut(s)	494, 1384
BspACI	CCGC	3 cut(s)	138, 920, 998
BspANI	GGCC	2 cut(s)	888, 1502
BspCNI	CTCAG	4 cut(s)	169, 200, 237, 874
BspDI	ATCGAT	1 cut(s)	1458
BspLI	GGNNCC	1 cut(s)	715
BspOI	GCTAGC	1 cut(s)	1262
BspPI	GGATC	3 cut(s)	361, 823, 1163
BspT104I	TTCGAA	1 cut(s)	1298
BspT107I	GGYRCC	1 cut(s)	713
BspTNI	GGTCTC	1 cut(s)	219
BsrBI	CCGCTC	1 cut(s)	922
BsrDI	GCAATG	1 cut(s)	17
BsrFI	RCCGGY	2 cut(s)	149, 640
BsrI	ACTGG	1 cut(s)	715
BssAI	RCCGGY	2 cut(s)	149, 640
BssECI	CCNNGG	5 cut(s)	494, 607, 1062, 1384, 1528
BssMI	GATC	7 cut(s)	353, 481, 631, 660, 815, 1168, 1455
BssT1I	CCWWGG	3 cut(s)	494, 1384, 1528
Bst2UI	CCWGG	5 cut(s)	608, 969, 1343, 1475, 1485
Bst4CI	ACNGT	5 cut(s)	667, 685, 1363, 1399, 1507
BstAPI	GCANNNNNTGC	1 cut(s)	28
BstBI	TTCGAA	1 cut(s)	1298
BstC8I	GCNNGC	4 cut(s)	151, 215, 1260, 1316
BstDEI	CTNAG	5 cut(s)	177, 187, 238, 245, 861
BstDSI	CCRYGG	2 cut(s)	494, 1384
BstF5I	GGATG	1 cut(s)	445
BstH2I	RGCGCY	1 cut(s)	147
BstHHI	GCGC	2 cut(s)	146, 514
BstKTI	GATC	7 cut(s)	356, 484, 634, 663, 818, 1171, 1458
BstMAI	GTCTC	2 cut(s)	219, 313
BstMBI	GATC	7 cut(s)	353, 481, 631, 660, 815, 1168, 1455
BstMWI	GCNNNNNNNGC	5 cut(s)	28, 150, 765, 1037, 1255
BstNI	CCWGG	5 cut(s)	608, 969, 1343, 1475, 1485
BstPAI	GACNNNNGTC	1 cut(s)	1361
BstSCI	CCNGG	5 cut(s)	606, 967, 1341, 1473, 1483
BstSFI	CTRYAG	1 cut(s)	684
BstV1I	GCAGC	9 cut(s)	133, 140, 151, 280, 346, 777, 867, 1015, 1236
BstV2I	GAAGAC	2 cut(s)	622, 1338
BstXI	CCANNNNNNTGG	1 cut(s)	1385
Bsu15I	ATCGAT	1 cut(s)	1458
BsuI	GTATCC	2 cut(s)	115, 251
BsuRI	GGCC	2 cut(s)	888, 1502
BsuTUI	ATCGAT	1 cut(s)	1458
BtgI	CCRYGG	2 cut(s)	494, 1384
BtgZI	GCGATG	1 cut(s)	774
BtsCI	GGATG	1 cut(s)	445
BtsIMutI	CAGTG	6 cut(s)	195, 1164, 1194, 1395, 1413, 1503
Cac8I	GCNNGC	4 cut(s)	151, 215, 1260, 1316
CfoI	GCGC	2 cut(s)	146, 514
Cfr10I	RCCGGY	2 cut(s)	149, 640
Cfr13I	GGNCC	3 cut(s)	114, 887, 1269
ClaI	ATCGAT	1 cut(s)	1458
Csp6I	GTAC	5 cut(s)	250, 714, 926, 1076, 1368
CviAII	CATG	3 cut(s)	495, 819, 1385
CviQI	GTAC	5 cut(s)	250, 714, 926, 1076, 1368
DdeI	CTNAG	5 cut(s)	177, 187, 238, 245, 861
DpnI	GATC	7 cut(s)	355, 483, 633, 662, 817, 1170, 1457
DpnII	GATC	7 cut(s)	353, 481, 631, 660, 815, 1168, 1455
DrdI	GACNNNNNNGTC	1 cut(s)	496
DseDI	GACNNNNNNGTC	1 cut(s)	496
EaeI	YGGCCR	1 cut(s)	1500
EciI	GGCGGA	1 cut(s)	153
Ecl136II	GAGCTC	1 cut(s)	1339
Eco130I	CCWWGG	3 cut(s)	494, 1384, 1528
Eco24I	GRGCYC	1 cut(s)	1341
Eco31I	GGTCTC	1 cut(s)	219
Eco47I	GGWCC	2 cut(s)	114, 1269
Eco53kI	GAGCTC	1 cut(s)	1339
Eco57I	CTGAAG	1 cut(s)	1350
Eco88I	CYCGRG	2 cut(s)	735, 811
EcoICRI	GAGCTC	1 cut(s)	1339
EcoO109I	RGGNCCY	1 cut(s)	114
EcoRI	GAATTC	1 cut(s)	534
EcoRII	CCWGG	5 cut(s)	606, 967, 1341, 1473, 1483
EcoT14I	CCWWGG	3 cut(s)	494, 1384, 1528
EcoT38I	GRGCYC	1 cut(s)	1341
ErhI	CCWWGG	3 cut(s)	494, 1384, 1528
FaeI	CATG	3 cut(s)	498, 822, 1388
FalI	AAGNNNNNCTT	2 cut(s)	427, 459
FaqI	GGGAC	1 cut(s)	308
FatI	CATG	3 cut(s)	494, 818, 1384
FauI	CCCGC	2 cut(s)	927, 1005
FbaI	TGATCA	1 cut(s)	481
FblI	GTMKAC	2 cut(s)	687, 1413
Fnu4HI	GCNGC	9 cut(s)	147, 154, 165, 294, 360, 766, 856, 1029, 1250
FokI	GGATG	1 cut(s)	452
FriOI	GRGCYC	1 cut(s)	1341
Fsp4HI	GCNGC	9 cut(s)	147, 154, 165, 294, 360, 766, 856, 1029, 1250
FspBI	CTAG	4 cut(s)	161, 347, 462, 1259
FspI	TGCGCA	1 cut(s)	513
GlaI	GCGC	2 cut(s)	145, 513
GluI	GCNGC	9 cut(s)	147, 154, 165, 294, 360, 766, 856, 1029, 1250
GsaI	CCCAGC	1 cut(s)	1249
GsuI	CTGGAG	1 cut(s)	1325
HaeII	RGCGCY	1 cut(s)	147
HaeIII	GGCC	2 cut(s)	888, 1502
HapII	CCGG	3 cut(s)	108, 150, 641
HhaI	GCGC	2 cut(s)	146, 514
Hin1II	CATG	3 cut(s)	498, 822, 1388
Hin6I	GCGC	2 cut(s)	144, 512
HinP1I	GCGC	2 cut(s)	144, 512
HincII	GTYRAC	3 cut(s)	988, 1414, 1467
HindII	GTYRAC	3 cut(s)	988, 1414, 1467
HindIII	AAGCTT	3 cut(s)	301, 786, 1148
HinfI	GANTC	8 cut(s)	458, 465, 490, 747, 1071, 1136, 1478, 1533
HpaII	CCGG	3 cut(s)	108, 150, 641
HphI	GGTGA	3 cut(s)	836, 1465, 1473
Hpy166II	GTNNAC	5 cut(s)	43, 688, 988, 1414, 1467
Hpy188I	TCNGA	3 cut(s)	178, 335, 864
Hpy188III	TCNNGA	6 cut(s)	310, 462, 673, 754, 813, 1547
Hpy8I	GTNNAC	5 cut(s)	43, 688, 988, 1414, 1467
HpyAV	CCTTC	7 cut(s)	127, 241, 931, 944, 1138, 1297, 1480
HpyCH4III	ACNGT	5 cut(s)	667, 685, 1363, 1399, 1507
HpyCH4IV	ACGT	1 cut(s)	170
HpyCH4V	TGCA	8 cut(s)	22, 167, 296, 680, 958, 977, 1353, 1395
HpyF10VI	GCNNNNNNNGC	5 cut(s)	28, 150, 765, 1037, 1255
HpyF3I	CTNAG	5 cut(s)	177, 187, 238, 245, 861
HpySE526I	ACGT	1 cut(s)	170
Hsp92II	CATG	3 cut(s)	498, 822, 1388
HspAI	GCGC	2 cut(s)	144, 512
KpnI	GGTACC	1 cut(s)	717
KroI	GCCGGC	1 cut(s)	149
KroNI	GCCGGC	1 cut(s)	151
Ksp22I	TGATCA	1 cut(s)	481
Kzo9I	GATC	7 cut(s)	353, 481, 631, 660, 815, 1168, 1455
LmnI	GCTCC	3 cut(s)	562, 845, 1344
Lsp1109I	GCAGC	9 cut(s)	133, 140, 151, 280, 346, 777, 867, 1015, 1236
LweI	GCATC	4 cut(s)	31, 430, 1311, 1549
MaeI	CTAG	4 cut(s)	161, 347, 462, 1259
MaeII	ACGT	1 cut(s)	170
MaeIII	GTNAC	1 cut(s)	1189
MalI	GATC	7 cut(s)	355, 483, 633, 662, 817, 1170, 1457
MbiI	CCGCTC	1 cut(s)	922
MboI	GATC	7 cut(s)	353, 481, 631, 660, 815, 1168, 1455
MfeI	CAATTG	1 cut(s)	1278
MhlI	GDGCHC	1 cut(s)	1341
MlsI	TGGCCA	1 cut(s)	1502
MluCI	AATT	8 cut(s)	182, 328, 534, 582, 1122, 1278, 1420, 1539
MluNI	TGGCCA	1 cut(s)	1502
MlyI	GAGTC	2 cut(s)	484, 1527
MmeI	TCCRAC	1 cut(s)	1031
Mox20I	TGGCCA	1 cut(s)	1502
MroNI	GCCGGC	1 cut(s)	149
MscI	TGGCCA	1 cut(s)	1502
MseI	TTAA	3 cut(s)	875, 1265, 1440
MslI	CAYNNNNRTG	1 cut(s)	1383
Msp20I	TGGCCA	1 cut(s)	1502
MspA1I	CMGCKG	4 cut(s)	293, 359, 629, 1249
MspI	CCGG	3 cut(s)	108, 150, 641
MspR9I	CCNGG	5 cut(s)	608, 969, 1343, 1475, 1485
MunI	CAATTG	1 cut(s)	1278
Mva1269I	GAATGC	3 cut(s)	508, 682, 960
MvaI	CCWGG	5 cut(s)	608, 969, 1343, 1475, 1485
MwoI	GCNNNNNNNGC	5 cut(s)	28, 150, 765, 1037, 1255
NaeI	GCCGGC	1 cut(s)	151
NcoI	CCATGG	2 cut(s)	494, 1384
NdeII	GATC	7 cut(s)	353, 481, 631, 660, 815, 1168, 1455
NgoMIV	GCCGGC	1 cut(s)	149
NheI	GCTAGC	1 cut(s)	1258
NlaIII	CATG	3 cut(s)	498, 822, 1388
NlaIV	GGNNCC	1 cut(s)	715
NmuCI	GTSAC	1 cut(s)	1189
NsbI	TGCGCA	1 cut(s)	513
NspV	TTCGAA	1 cut(s)	1298
PaeR7I	CTCGAG	1 cut(s)	735
PctI	GAATGC	3 cut(s)	508, 682, 960
PdiI	GCCGGC	1 cut(s)	151
PfeI	GAWTC	6 cut(s)	458, 465, 747, 1071, 1136, 1478
PfoI	TCCNGGA	2 cut(s)	1341, 1473
PkrI	GCNGC	9 cut(s)	148, 155, 166, 295, 361, 767, 857, 1030, 1251
PleI	GAGTC	2 cut(s)	484, 1527
PpsI	GAGTC	2 cut(s)	484, 1527
PpuMI	RGGWCCY	1 cut(s)	114
PshAI	GACNNNNGTC	1 cut(s)	1361
Psp124BI	GAGCTC	1 cut(s)	1341
Psp1406I	AACGTT	1 cut(s)	170
Psp5II	RGGWCCY	1 cut(s)	114
Psp6I	CCWGG	5 cut(s)	606, 967, 1341, 1473, 1483
PspFI	CCCAGC	1 cut(s)	1245
PspGI	CCWGG	5 cut(s)	606, 967, 1341, 1473, 1483
PspN4I	GGNNCC	1 cut(s)	715
PspPI	GGNCC	3 cut(s)	114, 887, 1269
PspPPI	RGGWCCY	1 cut(s)	114
PspXI	VCTCGAGB	1 cut(s)	735
PvuII	CAGCTG	4 cut(s)	293, 359, 629, 1249
RsaI	GTAC	5 cut(s)	251, 715, 927, 1077, 1369
RsaNI	GTAC	5 cut(s)	250, 714, 926, 1076, 1368
RseI	CAYNNNNRTG	1 cut(s)	1383
SacI	GAGCTC	1 cut(s)	1341
SalI	GTCGAC	1 cut(s)	1412
SaqAI	TTAA	3 cut(s)	875, 1265, 1440
SatI	GCNGC	9 cut(s)	147, 154, 165, 294, 360, 766, 856, 1029, 1250
Sau3AI	GATC	7 cut(s)	353, 481, 631, 660, 815, 1168, 1455
Sau96I	GGNCC	3 cut(s)	114, 887, 1269
SchI	GAGTC	2 cut(s)	484, 1527
ScrFI	CCNGG	5 cut(s)	608, 969, 1343, 1475, 1485
SduI	GDGCHC	1 cut(s)	1341
SfaNI	GCATC	4 cut(s)	31, 430, 1311, 1549
SfcI	CTRYAG	1 cut(s)	684
Sfr274I	CTCGAG	1 cut(s)	735
SfuI	TTCGAA	1 cut(s)	1298
SinI	GGWCC	2 cut(s)	114, 1269
SlaI	CTCGAG	1 cut(s)	735
SmiMI	CAYNNNNRTG	1 cut(s)	1383
SmlI	CTYRAG	3 cut(s)	735, 1253, 1447
SmoI	CTYRAG	3 cut(s)	735, 1253, 1447
Sse9I	AATT	8 cut(s)	182, 328, 534, 582, 1122, 1278, 1420, 1539
SsiI	CCGC	3 cut(s)	138, 920, 998
SspMI	CTAG	4 cut(s)	161, 347, 462, 1259
SstI	GAGCTC	1 cut(s)	1341
StyD4I	CCNGG	5 cut(s)	606, 967, 1341, 1473, 1483
StyI	CCWWGG	3 cut(s)	494, 1384, 1528
TaaI	ACNGT	5 cut(s)	667, 685, 1363, 1399, 1507
TaiI	ACGT	1 cut(s)	173
TaqI	TCGA	9 cut(s)	96, 120, 311, 500, 600, 736, 1298, 1413, 1458
TasI	AATT	8 cut(s)	182, 328, 534, 582, 1122, 1278, 1420, 1539
TfiI	GAWTC	6 cut(s)	458, 465, 747, 1071, 1136, 1478
Tru1I	TTAA	3 cut(s)	875, 1265, 1440
Tru9I	TTAA	3 cut(s)	875, 1265, 1440
TscAI	CASTG	6 cut(s)	195, 1171, 1194, 1402, 1413, 1510
TseFI	GTSAC	1 cut(s)	1189
TseI	GCWGC	9 cut(s)	146, 153, 164, 293, 359, 765, 855, 1028, 1249
Tsp45I	GTSAC	1 cut(s)	1189
TspDTI	ATGAA	9 cut(s)	6, 223, 294, 462, 585, 739, 798, 1102, 1317
TspGWI	ACGGA	2 cut(s)	237, 270
TspRI	CASTG	6 cut(s)	195, 1171, 1194, 1402, 1413, 1510
VpaK11BI	GGWCC	2 cut(s)	114, 1269
XapI	RAATTY	3 cut(s)	182, 534, 1539
XbaI	TCTAGA	1 cut(s)	461
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1385
XhoI	CTCGAG	1 cut(s)	735
XmiI	GTMKAC	2 cut(s)	687, 1413
XspI	CTAG	4 cut(s)	161, 347, 462, 1259

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.