Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1A

Orthogroup ID

OG0000426

Physical Location & Seq

Genomic Coordinates Forward (+)

30173122 .. 30174900

Gene Structure 1779 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1AG159100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1485 bp

ATGACTTCAAATGTCGAAGAAGTAGCCGGTAGGTCCTTCGACTACATTGTTGTTGGCGGAGGCACTGCGGGCTGCCCCCTAGCTGCAACCTTGTCTGAGAAATTCTCAGTGCTGTTGGTGGAACGAGGTGGCTCGCCTTATGGAGACCCCTTCATCTTAGAGTCAAAGTACTATGGATTCTCATTGCTCCAAACTGATGAATATACATCACCTGCACAAAGTTTTGTCTCGAAAGATGGTGTCAGCAATCTCAGAGGACGGGTGCTAGGAGGATCATCTGCTCTTAATGGTGGGTTTTACAGCAGAGCAAGTAAGGATTTTGTGAAAAAGGTCGGGTGGGATAATAAGGGAGTAAGGGATGCTTATGAATGGGTGGAATCTAGATTAAGCATCTCTAAACCTGATTTGACTCCATGGTCGAATGTTGTTGCGACTAGCTTTCTTGAAGCTGGAATTTGCCCCTATAATGGTTTTAGTTTGGAGCATATTCAGGGAACAAAGATTGGTGCTAGTTCGTACGATAATCAGGGAAGAAGACACTTATCCGCTGATCTTCTACCGGCGGGAAATCCAAGCAAGATCACAGTTCTCTTGAATGCAACTGTAAACAAAGTCATCTTTTACAGAAGTACTCGTACCACAGATGAGAAGATAGCTCGAGGTATAAGATTCATCAAGAGCGATGGCAGCTCGAAACAGAATTATGAAGCTTACGTGAACCAGCTGCAGCCAGATAACTCGGGTTCATGGGGTGATGTGATACTAACAGCAGGAGCTTTAGGCAGCCCTCAGATTTTGTTGTTAAGTGGCATTGGCCCTCAAGAACAGCTAAACAACTTTGAAATCCCGCTCGTACTCGACTTAAAGGGAGTTGGAGAAGGAATGCAAGACAATGCTGCTATTGGAATCTTAGCCAACTTCAAGCCGGAATATCGTACACCACAACCTCCAAAAGTTGTTGGTATAGCAGATGACTTCAAATTCATAATCAATGTAATAATTTTACCTATTAGCTTCAATGAAACAATAATTCCCGTTACTGGCAAAATTGCCTTCCCAGATTCCGTAGGAAAGCTTGAACTCAACAGCACCGACCCCAGAGCAAACCCATCAGTGACATTCAACTACCTATCAAGCGAGAAAGACTTGGCACAGTGTGTGACGCTGACCCAGCTGCTTGAGCTAACTTTAAGGTCCAAATCAATCGCTTCCTTCCTGGGTTCGAATGAACACCGAAACAAGCCGATGCCTACTCAAGACGAGCTCCGGAAACTCTGCAAGACGACTGTCAGAACCTTCTACCACTACCATGGTGGTTGCACTATGGGGTCAGTGGTCGACAAGAATTATAGGGTTTATGGTGTTAAAGGCTTGAGAGTGATTGATGGATCAACCTTCCTGGAATCACCAGGCACAAACCCAATGGCCACTCTGCTAATGCTTGGAAGATACCAAGGGCTCAAAATTCTTAAAGATAGAAGATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0003674 GO:0003824 GO:0005488 GO:0005575 GO:0005576 GO:0006082 GO:0006629 GO:0006631 GO:0007154 GO:0007267 GO:0007275 GO:0008150 GO:0008152 GO:0009553 GO:0009987 GO:0010430 GO:0016829 GO:0016830 GO:0016832 GO:0019395 GO:0019752 GO:0023052 GO:0030258 GO:0032501 GO:0032502 GO:0032787 GO:0034440 GO:0036094 GO:0043167 GO:0043168 GO:0043436 GO:0044237 GO:0044238 GO:0044255 GO:0044281 GO:0046593 GO:0048037 GO:0048229 GO:0048856 GO:0050660 GO:0050662 GO:0055114 GO:0071704 GO:0097159 GO:1901265 GO:1901363

KEGG Pathways

Metabolic & Signaling

ko00260 ko01100 map00260 map01100

Pfam Domains

Protein Families

GMC_oxred_C GMC_oxred_N

Protein Analysis

494

Amino Acids

53.9

Weight (kDa)

8.71

Isoelectric Point (pI)

33.55

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GMC_oxred_N	PF00732	13 - 297	1.1e-15	GMC oxidoreductase
GMC_oxred_C	PF05199	353 - 482	2.4e-30	GMC oxidoreductase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

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Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Publication-ready

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Orthologous Genes (Group: OG0000426)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G14185 AT1G14190 AT1G14190
fragaria_vesca	FvH4_4g31240
malus_domestica	MD13G1071000.v1.1 MD13G1071100.v1.1 MD16G1071700.v1.1 MD16G1071800.v1.1
prunus_persica	Prupe.1G275800_v2.0.a1
pyrus_communis	pycom13g06360 pycom13g06370 pycom16g06200
rosa_chinensis	RchiOBHm_Chr1g0339361 RchiOBHm_Chr1g0339551 RchiOBHm_Chr4g0439631 RchiOBHm_Chr4g0439641 RchiOBHm_Chr4g0439661 RchiOBHm_Chr4g0439681 RchiOBHm_Chr5g0043441 RchiOBHm_Chr5g0076991
rosa_laevigata	RLG00000006247 RLG00000006249 RLG00000006250 RLG00000006251 RLG00000006252 RLG00000029228 RLG00000029236 RLG00000034187 RLG00000036640
rosa_multiflora	Rmu_co8382505.1_g000001 Rmu_co8503591.1_g000001 Rmu_sc0000613.1_g000004 Rmu_sc0000729.1_g000011 Rmu_sc0002549.1_g000002 Rmu_sc0002549.1_g000008 Rmu_sc0004655.1_g000021 Rmu_sc0005220.1_g000001 Rmu_sc0007322.1_g000009 Rmu_sc0008285.1_g000002 Rmu_sc0009495.1_g000002 Rmu_ssc0000067.1_g000054
rosa_roxburghii	Rroxscaffold_1G00005160 Rroxscaffold_1G00037450 Rroxscaffold_4G00313450 Rroxscaffold_4G00313520 Rroxscaffold_5G00380580 Rroxscaffold_5G00380590
rosa_rugosa	Rorug01G0141000.1 Rorug01G0142300.1 Rorug01G0142400.1 Rorug04G0320400 Rorug04G0320500 Rorug04G0320500 Rorug04G0320800 Rorug04G0320900 Rorug05G0205800 Rorug05G0449900
rosa_samantha	Rh1AG158500 Rh1AG159100 Rh1BG126000 Rh1CG108300 Rh1CG147800 Rh1CG148300 Rh1DG116900 Rh4AG371400 Rh4AG371500 Rh4AG371600 Rh4AG371700 Rh4BG383200 Rh4BG383300 Rh4BG383400 Rh4BG383700 Rh4CG397800 Rh4CG398000 Rh4CG398100 Rh4CG398400 Rh4DG378000 Rh4DG378100 Rh4DG378200 Rh5AG291600 Rh5AG454300 Rh5AG504700 Rh5BG298300 Rh5BG526400 Rh5CG327800 Rh5CG550200 Rh5DG307600 Rh5DG538500
rosa_wichuraiana	Rw1G013210 Rw1G013570 Rw4G031660 Rw4G031680 Rw4G031690 Rw4G031710 Rw5G027060 Rw5G047170

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	220
AasI	GACNNNNNNGTC	1 cut(s)	415
Acc36I	ACCTGC	1 cut(s)	220
AccBSI	CCGCTC	1 cut(s)	850
AccI	GTMKAC	1 cut(s)	1338
AccIII	TCCGGA	1 cut(s)	1266
AciI	CCGC	5 cut(s)	57, 68, 546, 563, 848
AclWI	GGATC	2 cut(s)	280, 1396
AcoI	YGGCCR	1 cut(s)	1425
AcsI	RAATTY	4 cut(s)	101, 453, 980, 1464
AdeI	CACNNNGTG	1 cut(s)	1157
AfaI	GTAC	6 cut(s)	170, 518, 631, 637, 855, 937
AfiI	CCNNNNNNNGG	2 cut(s)	467, 1040
AgsI	TTSAA	9 cut(s)	9, 446, 595, 842, 922, 979, 1018, 1079, 1123
AjnI	CCWGG	3 cut(s)	1215, 1398, 1408
Alw21I	GWGCWC	1 cut(s)	1266
Alw26I	GTCTC	2 cut(s)	138, 232
AlwI	GGATC	2 cut(s)	280, 1396
Ama87I	CYCGRG	2 cut(s)	657, 739
Aor13HI	TCCGGA	1 cut(s)	1266
AoxI	GGCC	2 cut(s)	814, 1425
ApeKI	GCWGC	8 cut(s)	72, 83, 687, 724, 727, 783, 896, 1174
ApoI	RAATTY	4 cut(s)	101, 453, 980, 1464
AspS9I	GGNCC	3 cut(s)	33, 815, 1194
AsuHPI	GGTGA	3 cut(s)	201, 764, 1398
AsuII	TTCGAA	1 cut(s)	1223
AvaI	CYCGRG	2 cut(s)	657, 739
AvaII	GGWCC	2 cut(s)	33, 1194
BalI	TGGCCA	1 cut(s)	1427
BanII	GRGCYC	2 cut(s)	1266, 1461
BarI	GAAGNNNNNNTAC	2 cut(s)	619, 651
BbsI	GAAGAC	1 cut(s)	541
Bbv12I	GWGCWC	1 cut(s)	1266
BbvI	GCAGC	8 cut(s)	59, 70, 699, 711, 739, 795, 883, 1161
BccI	CCATC	4 cut(s)	230, 677, 1117, 1379
BciT130I	CCWGG	3 cut(s)	1217, 1400, 1410
BcoDI	GTCTC	2 cut(s)	138, 232
BfaI	CTAG	5 cut(s)	80, 266, 381, 435, 510
BfmI	CTRYAG	1 cut(s)	725
BfuAI	ACCTGC	1 cut(s)	220
BisI	GCNGC	8 cut(s)	73, 84, 688, 725, 728, 784, 897, 1175
BlsI	GCNGC	8 cut(s)	74, 85, 689, 726, 729, 785, 898, 1176
BmcAI	AGTACT	2 cut(s)	170, 631
Bme1390I	CCNGG	3 cut(s)	1217, 1400, 1410
Bme18I	GGWCC	2 cut(s)	33, 1194
BmeT110I	CYCGRG	2 cut(s)	657, 739
BmgT120I	GGNCC	3 cut(s)	33, 815, 1194
BmrFI	CCNGG	3 cut(s)	1217, 1400, 1410
BmsI	GCATC	3 cut(s)	349, 399, 1236
BoxI	GACNNNNGTC	1 cut(s)	1286
BpiI	GAAGAC	1 cut(s)	541
BplI	GAGNNNNNCTC	2 cut(s)	89, 121
Bpu14I	TTCGAA	1 cut(s)	1223
BpuEI	CTTGAG	4 cut(s)	804, 1199, 1239, 1393
BsaAI	YACGTR	1 cut(s)	715
BsaI	GGTCTC	1 cut(s)	138
BsaJI	CCNNGG	4 cut(s)	413, 1216, 1309, 1453
BsaWI	WCCGGW	1 cut(s)	1266
Bsc4I	CCNNNNNNNGG	2 cut(s)	467, 1040
Bse118I	RCCGGY	2 cut(s)	26, 559
Bse1I	ACTGG	1 cut(s)	1045
Bse3DI	GCAATG	1 cut(s)	182
BseAI	TCCGGA	1 cut(s)	1266
BseBI	CCWGG	3 cut(s)	1217, 1400, 1410
BseDI	CCNNGG	4 cut(s)	413, 1216, 1309, 1453
BseGI	GGATG	1 cut(s)	364
BseLI	CCNNNNNNNGG	2 cut(s)	467, 1040
BseMI	GCAATG	1 cut(s)	182
BseMII	CTCAG	4 cut(s)	87, 120, 265, 803
BseNI	ACTGG	1 cut(s)	1045
BseXI	GCAGC	8 cut(s)	59, 70, 699, 711, 739, 795, 883, 1161
BseYI	CCCAGC	1 cut(s)	1170
BsgI	GTGCAG	1 cut(s)	198
BshFI	GGCC	2 cut(s)	816, 1427
BsiHKAI	GWGCWC	1 cut(s)	1266
BsiHKCI	CYCGRG	2 cut(s)	657, 739
BsiSI	CCGG	4 cut(s)	27, 560, 926, 1267
BsiWI	CGTACG	1 cut(s)	516
BslI	CCNNNNNNNGG	2 cut(s)	467, 1040
BsmAI	GTCTC	2 cut(s)	138, 232
BsmI	GAATGC	2 cut(s)	601, 888
BsnI	GGCC	2 cut(s)	816, 1427
Bso31I	GGTCTC	1 cut(s)	138
BsoBI	CYCGRG	2 cut(s)	657, 739
Bsp119I	TTCGAA	1 cut(s)	1223
Bsp1286I	GDGCHC	2 cut(s)	1266, 1461
Bsp13I	TCCGGA	1 cut(s)	1266
Bsp143I	GATC	4 cut(s)	272, 550, 579, 1388
Bsp19I	CCATGG	2 cut(s)	413, 1309
BspACI	CCGC	5 cut(s)	57, 68, 546, 563, 848
BspANI	GGCC	2 cut(s)	816, 1427
BspCNI	CTCAG	4 cut(s)	88, 119, 264, 802
BspEI	TCCGGA	1 cut(s)	1266
BspMAI	CTGCAG	1 cut(s)	729
BspMI	ACCTGC	1 cut(s)	220
BspPI	GGATC	2 cut(s)	280, 1396
BspT104I	TTCGAA	1 cut(s)	1223
BspTNI	GGTCTC	1 cut(s)	138
BsrBI	CCGCTC	1 cut(s)	850
BsrDI	GCAATG	1 cut(s)	182
BsrFI	RCCGGY	2 cut(s)	26, 559
BsrI	ACTGG	1 cut(s)	1045
BssAI	RCCGGY	2 cut(s)	26, 559
BssECI	CCNNGG	4 cut(s)	413, 1216, 1309, 1453
BssMI	GATC	4 cut(s)	272, 550, 579, 1388
BssT1I	CCWWGG	3 cut(s)	413, 1309, 1453
Bst2UI	CCWGG	3 cut(s)	1217, 1400, 1410
Bst4CI	ACNGT	4 cut(s)	586, 604, 1155, 1288
BstBAI	YACGTR	1 cut(s)	715
BstBI	TTCGAA	1 cut(s)	1223
BstC8I	GCNNGC	2 cut(s)	70, 134
BstDEI	CTNAG	6 cut(s)	96, 106, 157, 251, 789, 910
BstDSI	CCRYGG	2 cut(s)	413, 1309
BstF5I	GGATG	1 cut(s)	364
BstKTI	GATC	4 cut(s)	275, 553, 582, 1391
BstMAI	GTCTC	2 cut(s)	138, 232
BstMBI	GATC	4 cut(s)	272, 550, 579, 1388
BstMWI	GCNNNNNNNGC	4 cut(s)	69, 687, 1171, 1180
BstNI	CCWGG	3 cut(s)	1217, 1400, 1410
BstPAI	GACNNNNGTC	1 cut(s)	1286
BstSCI	CCNGG	3 cut(s)	1215, 1398, 1408
BstSFI	CTRYAG	1 cut(s)	725
BstV1I	GCAGC	8 cut(s)	59, 70, 699, 711, 739, 795, 883, 1161
BstV2I	GAAGAC	1 cut(s)	541
BstXI	CCANNNNNNTGG	1 cut(s)	1310
BsuRI	GGCC	2 cut(s)	816, 1427
BtgI	CCRYGG	2 cut(s)	413, 1309
BtgZI	GCGATG	1 cut(s)	696
BtsCI	GGATG	1 cut(s)	364
BtsI	GCAGTG	1 cut(s)	63
BtsIMutI	CAGTG	5 cut(s)	63, 114, 1119, 1160, 1338
BveI	ACCTGC	1 cut(s)	220
Cac8I	GCNNGC	2 cut(s)	70, 134
Cfr10I	RCCGGY	2 cut(s)	26, 559
Cfr13I	GGNCC	3 cut(s)	33, 815, 1194
CseI	GACGC	1 cut(s)	1171
Csp6I	GTAC	6 cut(s)	169, 517, 630, 636, 854, 936
CviAII	CATG	3 cut(s)	414, 747, 1310
CviQI	GTAC	6 cut(s)	169, 517, 630, 636, 854, 936
DdeI	CTNAG	6 cut(s)	96, 106, 157, 251, 789, 910
DpnI	GATC	4 cut(s)	274, 552, 581, 1390
DpnII	GATC	4 cut(s)	272, 550, 579, 1388
DraIII	CACNNNGTG	1 cut(s)	1157
DrdI	GACNNNNNNGTC	1 cut(s)	415
DseDI	GACNNNNNNGTC	1 cut(s)	415
EaeI	YGGCCR	1 cut(s)	1425
EciI	GGCGGA	1 cut(s)	72
Ecl136II	GAGCTC	1 cut(s)	1264
Eco130I	CCWWGG	3 cut(s)	413, 1309, 1453
Eco24I	GRGCYC	2 cut(s)	1266, 1461
Eco31I	GGTCTC	1 cut(s)	138
Eco47I	GGWCC	2 cut(s)	33, 1194
Eco53kI	GAGCTC	1 cut(s)	1264
Eco88I	CYCGRG	2 cut(s)	657, 739
EcoICRI	GAGCTC	1 cut(s)	1264
EcoO109I	RGGNCCY	1 cut(s)	33
EcoRII	CCWGG	3 cut(s)	1215, 1398, 1408
EcoT14I	CCWWGG	3 cut(s)	413, 1309, 1453
EcoT38I	GRGCYC	2 cut(s)	1266, 1461
ErhI	CCWWGG	3 cut(s)	413, 1309, 1453
FaeI	CATG	3 cut(s)	417, 750, 1313
FalI	AAGNNNNNCTT	2 cut(s)	346, 378
FatI	CATG	3 cut(s)	413, 746, 1309
FauI	CCCGC	3 cut(s)	61, 556, 855
FblI	GTMKAC	1 cut(s)	1338
Fnu4HI	GCNGC	8 cut(s)	73, 84, 688, 725, 728, 784, 897, 1175
FokI	GGATG	1 cut(s)	371
FriOI	GRGCYC	2 cut(s)	1266, 1461
Fsp4HI	GCNGC	8 cut(s)	73, 84, 688, 725, 728, 784, 897, 1175
FspBI	CTAG	5 cut(s)	80, 266, 381, 435, 510
GluI	GCNGC	8 cut(s)	73, 84, 688, 725, 728, 784, 897, 1175
GsaI	CCCAGC	1 cut(s)	1174
HaeIII	GGCC	2 cut(s)	816, 1427
HapII	CCGG	4 cut(s)	27, 560, 926, 1267
HgaI	GACGC	1 cut(s)	1171
Hin1II	CATG	3 cut(s)	417, 750, 1313
HincII	GTYRAC	1 cut(s)	1339
HindII	GTYRAC	1 cut(s)	1339
HindIII	AAGCTT	2 cut(s)	708, 1073
HinfI	GANTC	8 cut(s)	161, 177, 377, 409, 669, 906, 1061, 1403
HpaII	CCGG	4 cut(s)	27, 560, 926, 1267
HphI	GGTGA	3 cut(s)	201, 764, 1398
Hpy166II	GTNNAC	4 cut(s)	607, 718, 938, 1339
Hpy188I	TCNGA	4 cut(s)	97, 254, 792, 1292
Hpy188III	TCNNGA	8 cut(s)	229, 381, 443, 592, 676, 821, 1256, 1267
Hpy8I	GTNNAC	4 cut(s)	607, 718, 938, 1339
HpyAV	CCTTC	7 cut(s)	46, 160, 872, 1063, 1222, 1306, 1405
HpyCH4III	ACNGT	4 cut(s)	586, 604, 1155, 1288
HpyCH4IV	ACGT	1 cut(s)	714
HpyCH4V	TGCA	7 cut(s)	86, 215, 599, 727, 886, 1278, 1320
HpyF10VI	GCNNNNNNNGC	4 cut(s)	69, 687, 1171, 1180
HpyF3I	CTNAG	6 cut(s)	96, 106, 157, 251, 789, 910
HpySE526I	ACGT	1 cut(s)	714
Hsp92II	CATG	3 cut(s)	417, 750, 1313
Kpn2I	TCCGGA	1 cut(s)	1266
Kzo9I	GATC	4 cut(s)	272, 550, 579, 1388
LmnI	GCTCC	4 cut(s)	192, 481, 773, 1269
Lsp1109I	GCAGC	8 cut(s)	59, 70, 699, 711, 739, 795, 883, 1161
LweI	GCATC	3 cut(s)	349, 399, 1236
MaeI	CTAG	5 cut(s)	80, 266, 381, 435, 510
MaeII	ACGT	1 cut(s)	714
MaeIII	GTNAC	3 cut(s)	1036, 1114, 1159
MalI	GATC	4 cut(s)	274, 552, 581, 1390
MbiI	CCGCTC	1 cut(s)	850
MboI	GATC	4 cut(s)	272, 550, 579, 1388
MboII	GAAGA	6 cut(s)	29, 543, 545, 546, 661, 1458
MhlI	GDGCHC	2 cut(s)	1266, 1461
MlsI	TGGCCA	1 cut(s)	1427
MluCI	AATT	9 cut(s)	101, 453, 700, 980, 999, 1029, 1047, 1345, 1464
MluNI	TGGCCA	1 cut(s)	1427
MlyI	GAGTC	2 cut(s)	170, 403
MmeI	TCCRAC	1 cut(s)	853
MnlI	CCTC	8 cut(s)	53, 119, 248, 263, 653, 798, 828, 957
Mox20I	TGGCCA	1 cut(s)	1427
MroI	TCCGGA	1 cut(s)	1266
MscI	TGGCCA	1 cut(s)	1427
MseI	TTAA	7 cut(s)	285, 386, 803, 863, 1190, 1365, 1470
MslI	CAYNNNNRTG	1 cut(s)	1308
Msp20I	TGGCCA	1 cut(s)	1427
MspA1I	CMGCKG	3 cut(s)	548, 724, 1174
MspI	CCGG	4 cut(s)	27, 560, 926, 1267
MspR9I	CCNGG	3 cut(s)	1217, 1400, 1410
Mva1269I	GAATGC	2 cut(s)	601, 888
MvaI	CCWGG	3 cut(s)	1217, 1400, 1410
MwoI	GCNNNNNNNGC	4 cut(s)	69, 687, 1171, 1180
NcoI	CCATGG	2 cut(s)	413, 1309
NdeII	GATC	4 cut(s)	272, 550, 579, 1388
NlaIII	CATG	3 cut(s)	417, 750, 1313
NmuCI	GTSAC	2 cut(s)	1114, 1159
NspV	TTCGAA	1 cut(s)	1223
PaeR7I	CTCGAG	1 cut(s)	657
PaqCI	CACCTGC	1 cut(s)	220
PctI	GAATGC	2 cut(s)	601, 888
PfeI	GAWTC	6 cut(s)	177, 377, 669, 906, 1061, 1403
Pfl23II	CGTACG	1 cut(s)	516
PfoI	TCCNGGA	1 cut(s)	1398
PkrI	GCNGC	8 cut(s)	74, 85, 689, 726, 729, 785, 898, 1176
PleI	GAGTC	2 cut(s)	169, 403
PpsI	GAGTC	2 cut(s)	169, 403
Ppu21I	YACGTR	1 cut(s)	715
PpuMI	RGGWCCY	1 cut(s)	33
PshAI	GACNNNNGTC	1 cut(s)	1286
Psp124BI	GAGCTC	1 cut(s)	1266
Psp5II	RGGWCCY	1 cut(s)	33
Psp6I	CCWGG	3 cut(s)	1215, 1398, 1408
PspFI	CCCAGC	1 cut(s)	1170
PspGI	CCWGG	3 cut(s)	1215, 1398, 1408
PspLI	CGTACG	1 cut(s)	516
PspPI	GGNCC	3 cut(s)	33, 815, 1194
PspPPI	RGGWCCY	1 cut(s)	33
PspXI	VCTCGAGB	1 cut(s)	657
PstI	CTGCAG	1 cut(s)	729
PvuII	CAGCTG	2 cut(s)	724, 1174
RsaI	GTAC	6 cut(s)	170, 518, 631, 637, 855, 937
RsaNI	GTAC	6 cut(s)	169, 517, 630, 636, 854, 936
RseI	CAYNNNNRTG	1 cut(s)	1308
SacI	GAGCTC	1 cut(s)	1266
SalI	GTCGAC	1 cut(s)	1337
SaqAI	TTAA	7 cut(s)	285, 386, 803, 863, 1190, 1365, 1470
SatI	GCNGC	8 cut(s)	73, 84, 688, 725, 728, 784, 897, 1175
Sau3AI	GATC	4 cut(s)	272, 550, 579, 1388
Sau96I	GGNCC	3 cut(s)	33, 815, 1194
ScaI	AGTACT	2 cut(s)	170, 631
SchI	GAGTC	2 cut(s)	170, 403
ScrFI	CCNGG	3 cut(s)	1217, 1400, 1410
SduI	GDGCHC	2 cut(s)	1266, 1461
SfaNI	GCATC	3 cut(s)	349, 399, 1236
SfcI	CTRYAG	1 cut(s)	725
Sfr274I	CTCGAG	1 cut(s)	657
SfuI	TTCGAA	1 cut(s)	1223
SinI	GGWCC	2 cut(s)	33, 1194
SlaI	CTCGAG	1 cut(s)	657
SmiMI	CAYNNNNRTG	1 cut(s)	1308
SmlI	CTYRAG	5 cut(s)	657, 819, 1178, 1254, 1372
SmoI	CTYRAG	5 cut(s)	657, 819, 1178, 1254, 1372
Sse9I	AATT	9 cut(s)	101, 453, 700, 980, 999, 1029, 1047, 1345, 1464
SsiI	CCGC	5 cut(s)	57, 68, 546, 563, 848
SspMI	CTAG	5 cut(s)	80, 266, 381, 435, 510
SstI	GAGCTC	1 cut(s)	1266
StyD4I	CCNGG	3 cut(s)	1215, 1398, 1408
StyI	CCWWGG	3 cut(s)	413, 1309, 1453
TaaI	ACNGT	4 cut(s)	586, 604, 1155, 1288
TaiI	ACGT	1 cut(s)	717
TaqI	TCGA	9 cut(s)	15, 39, 230, 419, 658, 692, 858, 1223, 1338
TasI	AATT	9 cut(s)	101, 453, 700, 980, 999, 1029, 1047, 1345, 1464
TatI	WGTACW	2 cut(s)	168, 629
TfiI	GAWTC	6 cut(s)	177, 377, 669, 906, 1061, 1403
Tru1I	TTAA	7 cut(s)	285, 386, 803, 863, 1190, 1365, 1470
Tru9I	TTAA	7 cut(s)	285, 386, 803, 863, 1190, 1365, 1470
TscAI	CASTG	5 cut(s)	70, 114, 1119, 1160, 1338
TseFI	GTSAC	2 cut(s)	1114, 1159
TseI	GCWGC	8 cut(s)	72, 83, 687, 724, 727, 783, 896, 1174
Tsp45I	GTSAC	2 cut(s)	1114, 1159
TspDTI	ATGAA	9 cut(s)	142, 213, 381, 661, 720, 735, 973, 1035, 1242
TspGWI	ACGGA	1 cut(s)	1054
TspRI	CASTG	5 cut(s)	70, 114, 1119, 1160, 1338
VpaK11BI	GGWCC	2 cut(s)	33, 1194
XapI	RAATTY	4 cut(s)	101, 453, 980, 1464
XbaI	TCTAGA	1 cut(s)	380
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1310
XhoI	CTCGAG	1 cut(s)	657
XmiI	GTMKAC	1 cut(s)	1338
XspI	CTAG	5 cut(s)	80, 266, 381, 435, 510
ZrmI	AGTACT	2 cut(s)	170, 631

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.