Rmu_sc0005220.1_g000001

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0005220.1
Physical Location & Seq
Reverse (-)
1608 .. 6385
4778 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0005220.1_g000001.1.cds

Sequence Viewer

Length: 3087 bp
atgacttcaaatgtcgaagaagtatccggtaggtccttcgattacattgtggttggtggaggcgctgccggctgccccctagctgcaacgttgtctgagagattctcagtgctgttggtggaacgaggtggctcgccttacggagaccccttcatcttagagctgaggtactacggatacccatttctcgtaagtgatgaatatacatcagctgcacaaagctttgtctcgacagatggtgttcccaatttcagaggaagagtgctaggaggatcatccgctatcaatggtgggttttacggcagagcaagcaaggattttgtcaaaaaggttggttgggataatgagggagtaagggatgcttatgaatgggtggaatctagaatcatcactaaacctgatcatttgactccatggtcgaatgctactgcgcatagctttgttgaagctggaattctcccctataatggtttcagtttggagcatattcggggaacaaaaattggtgctacttcattcgataaccagggaagaagacacttaccagctgatcttctaccggcaggaaatccaagcaagatcacagtcctcttgaatgcaactgtagacaaagttatctttcaaagaactggtaccagagaggagaagatagctcaaggtataagattcatcaagagcgatggcagctcaaaccagacttatgaagcttacctcaaccagccagacaactcgggatcatggggtgatgtgatactatcagcaggagctttaggcagccctcagattttgctgttaagtggcattggccctcaacaacacctaaacaactttgaaatcccgctcgtactcaacttgaagggagtaggagaaggaatgcaagacaatcctggtattgcaatctttgtcaactacaacccgcaaaatccaacaccagaacattccaaagctgctggtatagcagatgacttcaaaatcataatcgaggcaggaatcctacctattagcttgaatagaacatttgttagctattttattggcaaacttgccttcccagaatccgtaggaaagcttgaactcaacagcactgaccccagagcaaacccatcagtgacattcaactacctatcaaccgagaatgacttggcagaatgtgtgaagatgacccagctgcttgagctagctttaaggtccaaatcaattgcttccttcgtgggttcgaatgaataccaaagcaagccgatgcctactgaagacgagctccaggaactctgcaagacgactgtcggtactttctaccactaccatggtggttgcactgtggggtcagtggtcgacaagaattatagggtttatggtgttaaaggcttgagggtgatcgatgggattgggaaatctagaaccttctctcctattcctattcctagtttgataaggcacactaaacttgattttccttcaacagttctgcagctgtgttataacaagttgactggtggcatacctacagaactgggacatcttaggagcctaactgtccttgcattgcaatccaatcagttaacgggcgcaattcctgctagtttgggagagctggatacattaacaaggttggatttgagctttaataacttttttggtcctattcctgcaaggttagctgatgcccctatgctacaagtacttgacatccgaaacaatatcctctctggcaatgtacctccagctctgaggagacttaatggaggattccaatacgaaaacaaccctaggttatgtggtgttgggttttctgacttaaaagtttgcaatgctaatgctcagaacccaaacatgccacaaccttatgaacctaataacctttctgcaaaagatcttccaaactcacctcctgcaaaagatatccccgagtcggctaatgtacagtccaattgcagccaatcccgctgttcaggagcatcaaaatctacccaagttggtatagttcttggggtgatcggagttgttgttgctttaactgtagctggactctttacgttctcatggtatcgacggaggaaacagaagattgggaattcttttgacacatttgatagcaggcttagcactgatcaggcaaaggaggtttacaagaagaccgtgtctcctcttatcagtctggagtattcgaatggatgggacccgttggctaaaggtaacggcgggtactctcaagaagttcttgagagctttatgttcaatttggaagaagtggagcgtgcaactcagaccttttcggaactgaatctgctgcgcaagagcaatttttgttccatgtacaaagggatcctaagagatggatcagttgttgctgtaaactgcattggcaagacgagctgcaagtctgatgaagctgaatttttgaagggactgaagattttgacctccttaaaacatgaaaatcttgttaggttgagaggattttgctgttcaaaaggaaggggagagtggtttcttatctatgacttcgtcccaaatgaaagtctattacagtatcttgacattaaagatggtagtggggaggttcttgaatggtcaaccagagtatctataatcaatggcattgctaaaggtattgggtatttgcatggtaatataggcaacaaaccagctatagttcaccagagtatatcagctgagaaggtgcttattgattcccactataaccctttactctcagattcgggtttgcacaaactcctggcagctgatattatctactcgatgctcaaacccagtgctgccatgggatacttggctccagagtatgtgaccactggtcgcttcaccggaaagagcgatgtctatgcctttggtatgattatatttcaaatcctctcggggaaacgcaaaatcactaatgttactcgtcaaggggctgaggtaggcaggttcgaagatttcattgacgcgaaccttgaggagaggttttcagaatctgaggcaactaaactcggaagaattgctcttcattgcacccaggagtctcccaatcacagaccatccatagaatatgtggtcaaagaactaagtgagtttatctggacttga

Protein Analysis

1028

Amino Acids

112.5

Weight (kDa)

6.53

Isoelectric Point (pI)

34.37

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000426)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G14185 AT1G14190 AT1G14190
fragaria_vesca FvH4_4g31240
malus_domestica MD13G1071000.v1.1 MD13G1071100.v1.1 MD16G1071700.v1.1 MD16G1071800.v1.1
prunus_persica Prupe.1G275800_v2.0.a1
pyrus_communis pycom13g06360 pycom13g06370 pycom16g06200
rosa_chinensis RchiOBHm_Chr1g0339361 RchiOBHm_Chr1g0339551 RchiOBHm_Chr4g0439631 RchiOBHm_Chr4g0439641 RchiOBHm_Chr4g0439661 RchiOBHm_Chr4g0439681 RchiOBHm_Chr5g0043441 RchiOBHm_Chr5g0076991
rosa_laevigata RLG00000006247 RLG00000006249 RLG00000006250 RLG00000006251 RLG00000006252 RLG00000029228 RLG00000029236 RLG00000034187 RLG00000036640
rosa_multiflora Rmu_co8382505.1_g000001 Rmu_co8503591.1_g000001 Rmu_sc0000613.1_g000004 Rmu_sc0000729.1_g000011 Rmu_sc0002549.1_g000002 Rmu_sc0002549.1_g000008 Rmu_sc0004655.1_g000021 Rmu_sc0005220.1_g000001 Rmu_sc0007322.1_g000009 Rmu_sc0008285.1_g000002 Rmu_sc0009495.1_g000002 Rmu_ssc0000067.1_g000054
rosa_roxburghii Rroxscaffold_1G00005160 Rroxscaffold_1G00037450 Rroxscaffold_4G00313450 Rroxscaffold_4G00313520 Rroxscaffold_5G00380580 Rroxscaffold_5G00380590
rosa_rugosa Rorug01G0141000.1 Rorug01G0142300.1 Rorug01G0142400.1 Rorug04G0320400 Rorug04G0320500 Rorug04G0320500 Rorug04G0320800 Rorug04G0320900 Rorug05G0205800 Rorug05G0449900
rosa_samantha Rh1AG158500 Rh1AG159100 Rh1BG126000 Rh1CG108300 Rh1CG147800 Rh1CG148300 Rh1DG116900 Rh4AG371400 Rh4AG371500 Rh4AG371600 Rh4AG371700 Rh4BG383200 Rh4BG383300 Rh4BG383400 Rh4BG383700 Rh4CG397800 Rh4CG398000 Rh4CG398100 Rh4CG398400 Rh4DG378000 Rh4DG378100 Rh4DG378200 Rh5AG291600 Rh5AG454300 Rh5AG504700 Rh5BG298300 Rh5BG526400 Rh5CG327800 Rh5CG550200 Rh5DG307600 Rh5DG538500
rosa_wichuraiana Rw1G013210 Rw1G013570 Rw4G031660 Rw4G031680 Rw4G031690 Rw4G031710 Rw5G027060 Rw5G047170

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1479
AasI GACNNNNNNGTC 1 cut(s) 415
Acc16I TGCGCA 2 cut(s) 432, 2291
Acc36I ACCTGC 1 cut(s) 2916
Acc65I GGTACC 1 cut(s) 632
AccB1I GGYRCC 1 cut(s) 632
AccBSI CCGCTC 1 cut(s) 841
AccI GTMKAC 2 cut(s) 606, 1332
AccII CGCG 1 cut(s) 2948
AciI CCGC 5 cut(s) 279, 839, 917, 1942, 2199
AclI AACGTT 1 cut(s) 89
AclWI GGATC 5 cut(s) 280, 742, 2317, 2330, 2344
AcsI RAATTY 3 cut(s) 453, 2071, 2393
AcuI CTGAAG 2 cut(s) 1269, 2429
AfaI GTAC 9 cut(s) 170, 634, 846, 1288, 1680, 1716, 1920, 2204, 2315
AfiI CCNNNNNNNGG 2 cut(s) 467, 1909
AhdI GACNNNNNGTC 1 cut(s) 2814
AjnI CCWGG 5 cut(s) 525, 886, 1260, 2736, 3015
AloI GAACNNNNNNTCC 2 cut(s) 1390, 1422
Alw21I GWGCWC 1 cut(s) 1260
Alw26I GTCTC 5 cut(s) 138, 232, 1726, 2145, 3027
AlwI GGATC 5 cut(s) 280, 742, 2317, 2330, 2344
AlwNI CAGNNNCTG 1 cut(s) 2975
Ama87I CYCGRG 3 cut(s) 730, 1904, 2875
AoxI GGCC 1 cut(s) 805
ApoI RAATTY 3 cut(s) 453, 2071, 2393
Asp718I GGTACC 1 cut(s) 632
AspA2I CCTAGG 1 cut(s) 1766
AspLEI GCGC 4 cut(s) 65, 433, 1568, 2292
AspS9I GGNCC 5 cut(s) 33, 806, 1188, 1637, 2176
AsuHPI GGTGA 6 cut(s) 755, 1384, 1875, 2002, 2648, 2815
AsuII TTCGAA 3 cut(s) 1217, 2165, 2931
AsuNHI GCTAGC 1 cut(s) 1177
AvaI CYCGRG 3 cut(s) 730, 1904, 2875
AvaII GGWCC 4 cut(s) 33, 1188, 1637, 2176
AvrII CCTAGG 1 cut(s) 1766
BaeI ACNNNNGTAYC 2 cut(s) 2565, 2598
BamHI GGATCC 1 cut(s) 2322
BanI GGYRCC 1 cut(s) 632
BanII GRGCYC 1 cut(s) 1260
BbsI GAAGAC 3 cut(s) 541, 1257, 2138
Bbv12I GWGCWC 1 cut(s) 1260
BbvCI CCTCAGC 2 cut(s) 164, 2916
BccI CCATC 8 cut(s) 230, 674, 1111, 1373, 2166, 2327, 2540, 3046
BceAI ACGGC 2 cut(s) 316, 2212
BcgI CGANNNNNNTGC 2 cut(s) 2825, 2859
BciT130I CCWGG 5 cut(s) 527, 888, 1262, 2738, 3017
BciVI GTATCC 4 cut(s) 34, 170, 1588, 2780
BclI TGATCA 2 cut(s) 400, 2107
BcoDI GTCTC 5 cut(s) 138, 232, 1726, 2145, 3027
BfaI CTAG 8 cut(s) 80, 266, 381, 1178, 1395, 1422, 1578, 1767
BfmI CTRYAG 5 cut(s) 603, 1466, 1503, 2016, 2649
BfoI RGCGCY 1 cut(s) 66
BfuAI ACCTGC 1 cut(s) 2916
BfuI GTATCC 4 cut(s) 34, 170, 1588, 2780
BglII AGATCT 1 cut(s) 1870
BlnI CCTAGG 1 cut(s) 1766
BlpI GCTNAGC 1 cut(s) 2099
BmcAI AGTACT 1 cut(s) 1680
Bme1390I CCNGG 5 cut(s) 527, 888, 1262, 2738, 3017
Bme18I GGWCC 4 cut(s) 33, 1188, 1637, 2176
BmeRI GACNNNNNGTC 1 cut(s) 2814
BmeT110I CYCGRG 3 cut(s) 730, 1904, 2875
BmgT120I GGNCC 5 cut(s) 33, 806, 1188, 1637, 2176
BmiI GGNNCC 6 cut(s) 634, 1526, 2177, 2178, 2324, 2796
BmrFI CCNGG 5 cut(s) 527, 888, 1262, 2738, 3017
BmrI ACTGGG 2 cut(s) 1520, 2766
BmsI GCATC 5 cut(s) 349, 1230, 1651, 1964, 2751
BmtI GCTAGC 1 cut(s) 1181
BmuI ACTGGG 2 cut(s) 1520, 2766
BoxI GACNNNNGTC 1 cut(s) 1280
BpiI GAAGAC 3 cut(s) 541, 1257, 2138
BplI GAGNNNNNCTC 2 cut(s) 89, 121
BpmI CTGGAG 4 cut(s) 1244, 1704, 2177, 2781
Bpu10I CCTNAGC 2 cut(s) 164, 2916
Bpu1102I GCTNAGC 1 cut(s) 2099
Bpu14I TTCGAA 3 cut(s) 1217, 2165, 2931
BpuEI CTTGAG 6 cut(s) 639, 1193, 1387, 2193, 2240, 2975
Bsa29I ATCGAT 1 cut(s) 1377
BsaI GGTCTC 1 cut(s) 138
BsaJI CCNNGG 6 cut(s) 413, 526, 1303, 1766, 2781, 3015
BsaWI WCCGGW 2 cut(s) 26, 2825
BsaXI ACNNNNNCTCC 6 cut(s) 1390, 1420, 1989, 2019, 2125, 2155
Bsc4I CCNNNNNNNGG 2 cut(s) 467, 1909
Bse118I RCCGGY 2 cut(s) 68, 559
Bse1I ACTGG 5 cut(s) 634, 1495, 1515, 2772, 2818
Bse3DI GCAATG 5 cut(s) 1541, 1717, 1813, 2598, 3007
BseBI CCWGG 5 cut(s) 527, 888, 1262, 2738, 3017
BseCI ATCGAT 1 cut(s) 1377
BseDI CCNNGG 6 cut(s) 413, 526, 1303, 1766, 2781, 3015
BseGI GGATG 5 cut(s) 275, 364, 1686, 2177, 3038
BseLI CCNNNNNNNGG 2 cut(s) 467, 1909
BseMI GCAATG 5 cut(s) 1541, 1717, 1813, 2598, 3007
BseNI ACTGG 5 cut(s) 634, 1495, 1515, 2772, 2818
BseRI GAGGAG 4 cut(s) 656, 1744, 2133, 2972
BseYI CCCAGC 1 cut(s) 1164
BsgI GTGCAG 1 cut(s) 198
Bsh1236I CGCG 1 cut(s) 2948
BshFI GGCC 1 cut(s) 807
BshNI GGYRCC 1 cut(s) 632
BshVI ATCGAT 1 cut(s) 1377
BsiHKAI GWGCWC 1 cut(s) 1260
BsiHKCI CYCGRG 3 cut(s) 730, 1904, 2875
BsiSI CCGG 4 cut(s) 27, 69, 560, 2826
BslFI GGGAC 4 cut(s) 1527, 2189, 2418, 2492
BslI CCNNNNNNNGG 2 cut(s) 467, 1909
BsmAI GTCTC 5 cut(s) 138, 232, 1726, 2145, 3027
BsmFI GGGAC 4 cut(s) 1527, 2189, 2418, 2492
BsmI GAATGC 3 cut(s) 427, 601, 879
BsnI GGCC 1 cut(s) 807
Bso31I GGTCTC 1 cut(s) 138
BsoBI CYCGRG 3 cut(s) 730, 1904, 2875
Bsp119I TTCGAA 3 cut(s) 1217, 2165, 2931
Bsp1286I GDGCHC 1 cut(s) 1260
Bsp1407I TGTACA 2 cut(s) 1918, 2313
Bsp1720I GCTNAGC 1 cut(s) 2099
Bsp19I CCATGG 3 cut(s) 413, 1303, 2781
BspACI CCGC 5 cut(s) 279, 839, 917, 1942, 2199
BspANI GGCC 1 cut(s) 807
BspDI ATCGAT 1 cut(s) 1377
BspFNI CGCG 1 cut(s) 2948
BspLI GGNNCC 6 cut(s) 634, 1526, 2177, 2178, 2324, 2796
BspMAI CTGCAG 1 cut(s) 1470
BspMI ACCTGC 1 cut(s) 2916
BspOI GCTAGC 1 cut(s) 1181
BspPI GGATC 5 cut(s) 280, 742, 2317, 2330, 2344
BspQI GCTCTTC 1 cut(s) 3009
BspT104I TTCGAA 3 cut(s) 1217, 2165, 2931
BspT107I GGYRCC 1 cut(s) 632
BspTNI GGTCTC 1 cut(s) 138
BsrBI CCGCTC 1 cut(s) 841
BsrDI GCAATG 5 cut(s) 1541, 1717, 1813, 2598, 3007
BsrFI RCCGGY 2 cut(s) 68, 559
BsrGI TGTACA 2 cut(s) 1918, 2313
BsrI ACTGG 5 cut(s) 634, 1495, 1515, 2772, 2818
BssAI RCCGGY 2 cut(s) 68, 559
BssECI CCNNGG 6 cut(s) 413, 526, 1303, 1766, 2781, 3015
BssT1I CCWWGG 4 cut(s) 413, 1303, 1766, 2781
Bst2UI CCWGG 5 cut(s) 527, 888, 1262, 2738, 3017
Bst6I CTCTTC 2 cut(s) 253, 3009
BstAPI GCANNNNNTGC 1 cut(s) 1574
BstAUI TGTACA 2 cut(s) 1918, 2313
BstBI TTCGAA 3 cut(s) 1217, 2165, 2931
BstC8I GCNNGC 7 cut(s) 70, 134, 310, 1179, 1235, 2096, 2256
BstDSI CCRYGG 3 cut(s) 413, 1303, 2781
BstF5I GGATG 5 cut(s) 275, 364, 1686, 2177, 3038
BstFNI CGCG 1 cut(s) 2948
BstH2I RGCGCY 1 cut(s) 66
BstHHI GCGC 4 cut(s) 65, 433, 1568, 2292
BstMAI GTCTC 5 cut(s) 138, 232, 1726, 2145, 3027
BstNI CCWGG 5 cut(s) 527, 888, 1262, 2738, 3017
BstNSI RCATGY 1 cut(s) 1834
BstPAI GACNNNNGTC 1 cut(s) 1280
BstSCI CCNGG 5 cut(s) 525, 886, 1260, 2736, 3015
BstSFI CTRYAG 5 cut(s) 603, 1466, 1503, 2016, 2649
BstUI CGCG 1 cut(s) 2948
BstV2I GAAGAC 3 cut(s) 541, 1257, 2138
BstX2I RGATCY 2 cut(s) 1870, 2322
BstXI CCANNNNNNTGG 1 cut(s) 1304
BstYI RGATCY 2 cut(s) 1870, 2322
Bsu15I ATCGAT 1 cut(s) 1377
BsuI GTATCC 4 cut(s) 34, 170, 1588, 2780
BsuRI GGCC 1 cut(s) 807
BsuTUI ATCGAT 1 cut(s) 1377
BtgI CCRYGG 3 cut(s) 413, 1303, 2781
BtgZI GCGATG 2 cut(s) 693, 2850
BtsCI GGATG 5 cut(s) 275, 364, 1686, 2177, 3038
BtsIMutI CAGTG 8 cut(s) 114, 1083, 1113, 1314, 1332, 2103, 2779, 2811
BveI ACCTGC 1 cut(s) 2916
Cac8I GCNNGC 7 cut(s) 70, 134, 310, 1179, 1235, 2096, 2256
CaiI CAGNNNCTG 1 cut(s) 2975
CfoI GCGC 4 cut(s) 65, 433, 1568, 2292
Cfr10I RCCGGY 2 cut(s) 68, 559
Cfr13I GGNCC 5 cut(s) 33, 806, 1188, 1637, 2176
ClaI ATCGAT 1 cut(s) 1377
CseI GACGC 1 cut(s) 2954
Csp6I GTAC 9 cut(s) 169, 633, 845, 1287, 1679, 1715, 1919, 2203, 2314
CviAII CATG 9 cut(s) 414, 738, 1304, 1831, 2040, 2311, 2432, 2624, 2782
CviQI GTAC 9 cut(s) 169, 633, 845, 1287, 1679, 1715, 1919, 2203, 2314
DrdI GACNNNNNNGTC 1 cut(s) 415
DriI GACNNNNNGTC 1 cut(s) 2814
DseDI GACNNNNNNGTC 1 cut(s) 415
Eam1104I CTCTTC 2 cut(s) 253, 3009
Eam1105I GACNNNNNGTC 1 cut(s) 2814
EarI CTCTTC 2 cut(s) 253, 3009
Ecl136II GAGCTC 1 cut(s) 1258
Eco130I CCWWGG 4 cut(s) 413, 1303, 1766, 2781
Eco24I GRGCYC 1 cut(s) 1260
Eco31I GGTCTC 1 cut(s) 138
Eco32I GATATC 1 cut(s) 1900
Eco47I GGWCC 4 cut(s) 33, 1188, 1637, 2176
Eco53kI GAGCTC 1 cut(s) 1258
Eco57I CTGAAG 2 cut(s) 1269, 2429
Eco88I CYCGRG 3 cut(s) 730, 1904, 2875
EcoICRI GAGCTC 1 cut(s) 1258
EcoO109I RGGNCCY 2 cut(s) 33, 2176
EcoRI GAATTC 2 cut(s) 453, 2071
EcoRII CCWGG 5 cut(s) 525, 886, 1260, 2736, 3015
EcoRV GATATC 1 cut(s) 1900
EcoT14I CCWWGG 4 cut(s) 413, 1303, 1766, 2781
EcoT38I GRGCYC 1 cut(s) 1260
ErhI CCWWGG 4 cut(s) 413, 1303, 1766, 2781
FaeI CATG 9 cut(s) 417, 741, 1307, 1834, 2043, 2314, 2435, 2627, 2785
FalI AAGNNNNNCTT 4 cut(s) 346, 378, 2202, 2234
FaqI GGGAC 4 cut(s) 1527, 2189, 2418, 2492
FatI CATG 9 cut(s) 413, 737, 1303, 1830, 2039, 2310, 2431, 2623, 2781
FauI CCCGC 4 cut(s) 846, 924, 1949, 2192
FbaI TGATCA 2 cut(s) 400, 2107
FblI GTMKAC 2 cut(s) 606, 1332
FokI GGATG 5 cut(s) 262, 371, 1673, 2184, 3025
FriOI GRGCYC 1 cut(s) 1260
FspBI CTAG 8 cut(s) 80, 266, 381, 1178, 1395, 1422, 1578, 1767
FspI TGCGCA 2 cut(s) 432, 2291
GlaI GCGC 4 cut(s) 64, 432, 1567, 2291
GsaI CCCAGC 1 cut(s) 1168
GsuI CTGGAG 4 cut(s) 1244, 1704, 2177, 2781
HaeII RGCGCY 1 cut(s) 66
HaeIII GGCC 1 cut(s) 807
HapII CCGG 4 cut(s) 27, 69, 560, 2826
HgaI GACGC 1 cut(s) 2954
HhaI GCGC 4 cut(s) 65, 433, 1568, 2292
Hin1II CATG 9 cut(s) 417, 741, 1307, 1834, 2043, 2314, 2435, 2627, 2785
Hin6I GCGC 4 cut(s) 63, 431, 1566, 2290
HinP1I GCGC 4 cut(s) 63, 431, 1566, 2290
HincII GTYRAC 5 cut(s) 907, 1333, 1488, 1560, 2574
HindII GTYRAC 5 cut(s) 907, 1333, 1488, 1560, 2574
HindIII AAGCTT 3 cut(s) 220, 705, 1067
HpaI GTTAAC 1 cut(s) 1560
HpaII CCGG 4 cut(s) 27, 69, 560, 2826
HphI GGTGA 6 cut(s) 755, 1384, 1875, 2002, 2648, 2815
Hpy166II GTNNAC 9 cut(s) 607, 907, 1333, 1488, 1560, 2125, 2353, 2574, 2656
Hpy8I GTNNAC 9 cut(s) 607, 907, 1333, 1488, 1560, 2125, 2353, 2574, 2656
Hpy99I CGWCG 1 cut(s) 2052
HpyCH4IV ACGT 2 cut(s) 89, 2033
HpySE526I ACGT 2 cut(s) 89, 2033
Hsp92II CATG 9 cut(s) 417, 741, 1307, 1834, 2043, 2314, 2435, 2627, 2785
HspAI GCGC 4 cut(s) 63, 431, 1566, 2290
KflI GGGWCCC 1 cut(s) 2176
KpnI GGTACC 1 cut(s) 636
KroI GCCGGC 1 cut(s) 68
KroNI GCCGGC 1 cut(s) 70
Ksp22I TGATCA 2 cut(s) 400, 2107
KspAI GTTAAC 1 cut(s) 1560
LguI GCTCTTC 1 cut(s) 3009
LmnI GCTCC 7 cut(s) 481, 764, 1263, 1524, 1952, 2251, 2800
LweI GCATC 5 cut(s) 349, 1230, 1651, 1964, 2751
MaeI CTAG 8 cut(s) 80, 266, 381, 1178, 1395, 1422, 1578, 1767
MaeII ACGT 2 cut(s) 89, 2033
MaeIII GTNAC 4 cut(s) 1108, 2192, 2806, 2899
MbiI CCGCTC 1 cut(s) 841
MfeI CAATTG 2 cut(s) 1197, 1927
MflI RGATCY 2 cut(s) 1870, 2322
MhlI GDGCHC 1 cut(s) 1260
MlyI GAGTC 4 cut(s) 403, 1916, 2019, 3029
MmeI TCCRAC 2 cut(s) 950, 1590
MroNI GCCGGC 1 cut(s) 68
MslI CAYNNNNRTG 1 cut(s) 1302
MspA1I CMGCKG 7 cut(s) 212, 548, 1168, 1471, 1944, 2672, 2744
MspI CCGG 4 cut(s) 27, 69, 560, 2826
MspR9I CCNGG 5 cut(s) 527, 888, 1262, 2738, 3017
MunI CAATTG 2 cut(s) 1197, 1927
Mva1269I GAATGC 3 cut(s) 427, 601, 879
MvaI CCWGG 5 cut(s) 527, 888, 1262, 2738, 3017
MvnI CGCG 1 cut(s) 2948
NaeI GCCGGC 1 cut(s) 70
NcoI CCATGG 3 cut(s) 413, 1303, 2781
NgoMIV GCCGGC 1 cut(s) 68
NheI GCTAGC 1 cut(s) 1177
NlaIII CATG 9 cut(s) 417, 741, 1307, 1834, 2043, 2314, 2435, 2627, 2785
NlaIV GGNNCC 6 cut(s) 634, 1526, 2177, 2178, 2324, 2796
NmuCI GTSAC 2 cut(s) 1108, 2806
NsbI TGCGCA 2 cut(s) 432, 2291
NspI RCATGY 1 cut(s) 1834
NspV TTCGAA 3 cut(s) 1217, 2165, 2931
PciSI GCTCTTC 1 cut(s) 3009
PctI GAATGC 3 cut(s) 427, 601, 879
PdiI GCCGGC 1 cut(s) 70
PflFI GACNNNGTC 2 cut(s) 2137, 2504
PfoI TCCNGGA 1 cut(s) 1260
PleI GAGTC 4 cut(s) 403, 1915, 2019, 3028
PpsI GAGTC 4 cut(s) 403, 1915, 2019, 3028
PpuMI RGGWCCY 2 cut(s) 33, 2176
PshAI GACNNNNGTC 1 cut(s) 1280
PsiI TTATAA 1 cut(s) 1479
Psp124BI GAGCTC 1 cut(s) 1260
Psp1406I AACGTT 1 cut(s) 89
Psp5II RGGWCCY 2 cut(s) 33, 2176
Psp6I CCWGG 5 cut(s) 525, 886, 1260, 2736, 3015
PspFI CCCAGC 1 cut(s) 1164
PspGI CCWGG 5 cut(s) 525, 886, 1260, 2736, 3015
PspN4I GGNNCC 6 cut(s) 634, 1526, 2177, 2178, 2324, 2796
PspPI GGNCC 5 cut(s) 33, 806, 1188, 1637, 2176
PspPPI RGGWCCY 2 cut(s) 33, 2176
PstI CTGCAG 1 cut(s) 1470
PstNI CAGNNNCTG 1 cut(s) 2975
PsuI RGATCY 2 cut(s) 1870, 2322
PsyI GACNNNGTC 2 cut(s) 2137, 2504
PvuII CAGCTG 6 cut(s) 212, 548, 1168, 1471, 2672, 2744
RsaI GTAC 9 cut(s) 170, 634, 846, 1288, 1680, 1716, 1920, 2204, 2315
RsaNI GTAC 9 cut(s) 169, 633, 845, 1287, 1679, 1715, 1919, 2203, 2314
RseI CAYNNNNRTG 1 cut(s) 1302
SacI GAGCTC 1 cut(s) 1260
SalI GTCGAC 1 cut(s) 1331
SapI GCTCTTC 1 cut(s) 3009
Sau96I GGNCC 5 cut(s) 33, 806, 1188, 1637, 2176
ScaI AGTACT 1 cut(s) 1680
SchI GAGTC 4 cut(s) 403, 1916, 2019, 3029
ScrFI CCNGG 5 cut(s) 527, 888, 1262, 2738, 3017
SduI GDGCHC 1 cut(s) 1260
SfaNI GCATC 5 cut(s) 349, 1230, 1651, 1964, 2751
SfcI CTRYAG 5 cut(s) 603, 1466, 1503, 2016, 2649
SfuI TTCGAA 3 cut(s) 1217, 2165, 2931
SinI GGWCC 4 cut(s) 33, 1188, 1637, 2176
SmiMI CAYNNNNRTG 1 cut(s) 1302
SmlI CTYRAG 6 cut(s) 654, 1172, 1366, 2208, 2219, 2954
SmoI CTYRAG 6 cut(s) 654, 1172, 1366, 2208, 2219, 2954
SsiI CCGC 5 cut(s) 279, 839, 917, 1942, 2199
SspMI CTAG 8 cut(s) 80, 266, 381, 1178, 1395, 1422, 1578, 1767
SstI GAGCTC 1 cut(s) 1260
StyD4I CCNGG 5 cut(s) 525, 886, 1260, 2736, 3015
StyI CCWWGG 4 cut(s) 413, 1303, 1766, 2781
TaiI ACGT 2 cut(s) 92, 2036
TatI WGTACW 3 cut(s) 1678, 1918, 2313
TscAI CASTG 8 cut(s) 114, 1090, 1113, 1321, 1332, 2110, 2779, 2818
TseFI GTSAC 2 cut(s) 1108, 2806
Tsp45I GTSAC 2 cut(s) 1108, 2806
TspGWI ACGGA 4 cut(s) 156, 189, 1048, 2065
TspRI CASTG 8 cut(s) 114, 1090, 1113, 1321, 1332, 2110, 2779, 2818
Tth111I GACNNNGTC 2 cut(s) 2137, 2504
VpaK11BI GGWCC 4 cut(s) 33, 1188, 1637, 2176
XapI RAATTY 3 cut(s) 453, 2071, 2393
XbaI TCTAGA 2 cut(s) 380, 1394
XceI RCATGY 1 cut(s) 1834
XcmI CCANNNNNNNNNTGG 4 cut(s) 1304, 2779, 2788, 3049
XmaJI CCTAGG 1 cut(s) 1766
XmiI GTMKAC 2 cut(s) 606, 1332
XspI CTAG 8 cut(s) 80, 266, 381, 1178, 1395, 1422, 1578, 1767
ZrmI AGTACT 1 cut(s) 1680
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.