Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000004

Orthogroup ID

OG0000426

Physical Location & Seq

Genomic Coordinates Reverse (-)

36947537 .. 36954655

Gene Structure 7119 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_4G00313450.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1599 bp

ATGCTTTCCGGCAATGCTGCAGGGCGGGAATATACTAATATTGACGAGTGTATATGTAAGCTTTCTAGCTGTAATACACACGGTGTAATCATGCAAACATTCCCCTATATGACTTCAAATGTCGAAGAAGTAGCCGGTAGGTCCTTCGACTACATTGTTGTTGGCGGAGGCACTGCAGGCTGCCCCCTAGCTGCAACCTTGTCTGAGAAATTCTCAGTGCTGTTGGTGGAACGAGGTGGCTCGCCTTATGGAGACCCCTTCATCTTAGAGTCAAAGTACTATGGATTCTCATTGCTCCAAACTGATGAATATACATCACCTGCACAAAGCTTTGTCTCGAAAGATGGTGTCAGCAATCTCAGAGGACGGGTGCTAGGAGGATCATCTGCTCTTAATGGTGGGTTTTACAGCAGAGCAAGTAAGGATTTTGTCAAAAAGGTCGGGTGGGATAATAAGGGAGTAAGGGATGCTTATGAATGGGTGGAATCTAGATTAAGCATCTCTAAACCTGATTTGACTCCATGGTCGCATGTTGTTGCGACTAGCTTTCTTGAAGCTGGAATTTGCCCCTATAATGGTTTTAGTTTGGAGCATATTCAGGGAACAAAGATTGGTGCTAGTTCGTTCGATAATCAGGGAAGAAGACACTTATCAGCTGATCTTCTACCGGCGGGAAATCCAAGCAAGATCACAGTTCTCTTGAATGCAACTGTAAACAAAGTCATCTTTTACAGAACTCGTAAGCATGGTACCATAGATGAGAAGATAGCTCGAGGTATAAGATTCATCAAGAGCGATGGCAGCTCGAAACAGAATTATGAAGCTTACGTGAACCAGCTGCAGCCAGATAACCCGGGTTCATGGGGTGATGTGATACTAACAGCAGGAGCTTTAGGCAGCCCTCAGATTTTGTTGTTAAGTGGCATTGGCCCTCAAGAACAGCTAAACAACTTTGAAATCCCGCTCGTACTCGACTTAAAGGGAGTTGGAGAAGGAATGCAAGACAATGCTGCTATTGGAATCTTAGCCAACTTCAAGCCGGAATATCGAACACCACAACCTCCAAAAGTTGTTGGTATAGCAGATGACTTCAAATTCATAATCAATGTAATCATTTTACCTATTAGCTTCAATGAAACAATAATTCCCGTTACTGGCAAAATTGCCTTCCCAGATTCCGTAGGAAAGCTTGAACTCAACAGCACCGACCCCAGAGCAAACGCATCAGTGTCATTCAACTACCTATCAAGCGAGAAAGACTTGGCACAGTGTGTGACGCTGACCCAGCTGCTTGAGCTAATTTTAAGGTCCAAATCAATCGCTTCCTTCCTGGGTTCGAATGAACACCGAAACAAGCCGATGCCTACTCAAGACGAGCTCCGGAAACTCTGCAAGACTACTGTCAGAACCTTCTACCACTACCATGGTGGTTGCACTATGGGGTCAGTGGTCGACAAGAATTATAGGGTTTATGGTGTTAAAGGCTTGAGAGTGGTTGATGGATCAACCTTCCTGGAATCACCAGGCACAAACCCAATGGCCACTCTGCTAATGCTTGGAAGATACCAAGGGCTCAAAATTCTTAAAGATAGAAAATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0003674 GO:0003824 GO:0005488 GO:0005575 GO:0005576 GO:0006082 GO:0006629 GO:0006631 GO:0007154 GO:0007267 GO:0007275 GO:0008150 GO:0008152 GO:0009553 GO:0009987 GO:0010430 GO:0016829 GO:0016830 GO:0016832 GO:0019395 GO:0019752 GO:0023052 GO:0030258 GO:0032501 GO:0032502 GO:0032787 GO:0034440 GO:0036094 GO:0043167 GO:0043168 GO:0043436 GO:0044237 GO:0044238 GO:0044255 GO:0044281 GO:0046593 GO:0048037 GO:0048229 GO:0048856 GO:0050660 GO:0050662 GO:0055114 GO:0071704 GO:0097159 GO:1901265 GO:1901363

KEGG Pathways

Metabolic & Signaling

ko00260 ko01100 map00260 map01100

Pfam Domains

Protein Families

GMC_oxred_C GMC_oxred_N

Protein Analysis

532

Amino Acids

58.05

Weight (kDa)

8.57

Isoelectric Point (pI)

31.83

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GMC_oxred_N	PF00732	49 - 335	7.9e-15	GMC oxidoreductase
GMC_oxred_C	PF05199	391 - 520	5.7e-30	GMC oxidoreductase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000426)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G14185 AT1G14190 AT1G14190
fragaria_vesca	FvH4_4g31240
malus_domestica	MD13G1071000.v1.1 MD13G1071100.v1.1 MD16G1071700.v1.1 MD16G1071800.v1.1
prunus_persica	Prupe.1G275800_v2.0.a1
pyrus_communis	pycom13g06360 pycom13g06370 pycom16g06200
rosa_chinensis	RchiOBHm_Chr1g0339361 RchiOBHm_Chr1g0339551 RchiOBHm_Chr4g0439631 RchiOBHm_Chr4g0439641 RchiOBHm_Chr4g0439661 RchiOBHm_Chr4g0439681 RchiOBHm_Chr5g0043441 RchiOBHm_Chr5g0076991
rosa_laevigata	RLG00000006247 RLG00000006249 RLG00000006250 RLG00000006251 RLG00000006252 RLG00000029228 RLG00000029236 RLG00000034187 RLG00000036640
rosa_multiflora	Rmu_co8382505.1_g000001 Rmu_co8503591.1_g000001 Rmu_sc0000613.1_g000004 Rmu_sc0000729.1_g000011 Rmu_sc0002549.1_g000002 Rmu_sc0002549.1_g000008 Rmu_sc0004655.1_g000021 Rmu_sc0005220.1_g000001 Rmu_sc0007322.1_g000009 Rmu_sc0008285.1_g000002 Rmu_sc0009495.1_g000002 Rmu_ssc0000067.1_g000054
rosa_roxburghii	Rroxscaffold_1G00005160 Rroxscaffold_1G00037450 Rroxscaffold_4G00313450 Rroxscaffold_4G00313520 Rroxscaffold_5G00380580 Rroxscaffold_5G00380590
rosa_rugosa	Rorug01G0141000.1 Rorug01G0142300.1 Rorug01G0142400.1 Rorug04G0320400 Rorug04G0320500 Rorug04G0320500 Rorug04G0320800 Rorug04G0320900 Rorug05G0205800 Rorug05G0449900
rosa_samantha	Rh1AG158500 Rh1AG159100 Rh1BG126000 Rh1CG108300 Rh1CG147800 Rh1CG148300 Rh1DG116900 Rh4AG371400 Rh4AG371500 Rh4AG371600 Rh4AG371700 Rh4BG383200 Rh4BG383300 Rh4BG383400 Rh4BG383700 Rh4CG397800 Rh4CG398000 Rh4CG398100 Rh4CG398400 Rh4DG378000 Rh4DG378100 Rh4DG378200 Rh5AG291600 Rh5AG454300 Rh5AG504700 Rh5BG298300 Rh5BG526400 Rh5CG327800 Rh5CG550200 Rh5DG307600 Rh5DG538500
rosa_wichuraiana	Rw1G013210 Rw1G013570 Rw4G031660 Rw4G031680 Rw4G031690 Rw4G031710 Rw5G027060 Rw5G047170

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	328
AasI	GACNNNNNNGTC	1 cut(s)	523
Acc36I	ACCTGC	1 cut(s)	328
Acc65I	GGTACC	1 cut(s)	749
AccB1I	GGYRCC	1 cut(s)	749
AccBSI	CCGCTC	1 cut(s)	964
AccI	GTMKAC	1 cut(s)	1452
AccIII	TCCGGA	1 cut(s)	1380
AciI	CCGC	4 cut(s)	25, 165, 671, 962
AclWI	GGATC	2 cut(s)	388, 1510
AcoI	YGGCCR	1 cut(s)	1539
AcsI	RAATTY	4 cut(s)	209, 561, 1094, 1578
AdeI	CACNNNGTG	2 cut(s)	83, 1271
AfaI	GTAC	3 cut(s)	278, 751, 969
AfiI	CCNNNNNNNGG	2 cut(s)	575, 1154
AgsI	TTSAA	9 cut(s)	117, 554, 703, 956, 1036, 1093, 1132, 1193, 1237
AjnI	CCWGG	3 cut(s)	1329, 1512, 1522
Alw21I	GWGCWC	1 cut(s)	1380
Alw26I	GTCTC	2 cut(s)	246, 340
AlwI	GGATC	2 cut(s)	388, 1510
Ama87I	CYCGRG	2 cut(s)	771, 853
Aor13HI	TCCGGA	1 cut(s)	1380
AoxI	GGCC	2 cut(s)	928, 1539
ApeKI	GCWGC	9 cut(s)	17, 180, 191, 801, 838, 841, 897, 1010, 1288
ApoI	RAATTY	4 cut(s)	209, 561, 1094, 1578
Asp718I	GGTACC	1 cut(s)	749
AspS9I	GGNCC	3 cut(s)	141, 929, 1308
AsuC2I	CCSGG	2 cut(s)	854, 855
AsuHPI	GGTGA	3 cut(s)	309, 878, 1512
AsuII	TTCGAA	1 cut(s)	1337
AvaI	CYCGRG	2 cut(s)	771, 853
AvaII	GGWCC	2 cut(s)	141, 1308
BalI	TGGCCA	1 cut(s)	1541
BanI	GGYRCC	1 cut(s)	749
BanII	GRGCYC	2 cut(s)	1380, 1575
BbsI	GAAGAC	1 cut(s)	649
Bbv12I	GWGCWC	1 cut(s)	1380
BbvI	GCAGC	9 cut(s)	4, 167, 178, 813, 825, 853, 909, 997, 1275
BccI	CCATC	3 cut(s)	338, 791, 1493
BciT130I	CCWGG	3 cut(s)	1331, 1514, 1524
BcnI	CCSGG	2 cut(s)	854, 855
BcoDI	GTCTC	2 cut(s)	246, 340
BfaI	CTAG	6 cut(s)	66, 188, 374, 489, 543, 618
BfmI	CTRYAG	3 cut(s)	18, 174, 839
BfuAI	ACCTGC	1 cut(s)	328
BisI	GCNGC	9 cut(s)	18, 181, 192, 802, 839, 842, 898, 1011, 1289
BlsI	GCNGC	9 cut(s)	19, 182, 193, 803, 840, 843, 899, 1012, 1290
BmcAI	AGTACT	1 cut(s)	278
Bme1390I	CCNGG	5 cut(s)	854, 855, 1331, 1514, 1524
Bme18I	GGWCC	2 cut(s)	141, 1308
BmeT110I	CYCGRG	2 cut(s)	771, 853
BmgT120I	GGNCC	3 cut(s)	141, 929, 1308
BmiI	GGNNCC	1 cut(s)	751
BmrFI	CCNGG	5 cut(s)	854, 855, 1331, 1514, 1524
BmsI	GCATC	4 cut(s)	457, 507, 1232, 1350
BoxI	GACNNNNGTC	1 cut(s)	1400
BpiI	GAAGAC	1 cut(s)	649
BplI	GAGNNNNNCTC	2 cut(s)	197, 229
Bpu14I	TTCGAA	1 cut(s)	1337
BpuEI	CTTGAG	4 cut(s)	918, 1313, 1353, 1507
BpuMI	CCSGG	2 cut(s)	854, 855
BsaAI	YACGTR	1 cut(s)	829
BsaI	GGTCTC	1 cut(s)	246
BsaJI	CCNNGG	5 cut(s)	521, 853, 1330, 1423, 1567
BsaWI	WCCGGW	1 cut(s)	1380
Bsc4I	CCNNNNNNNGG	2 cut(s)	575, 1154
Bse118I	RCCGGY	2 cut(s)	134, 667
Bse1I	ACTGG	1 cut(s)	1159
Bse3DI	GCAATG	2 cut(s)	19, 290
BseAI	TCCGGA	1 cut(s)	1380
BseBI	CCWGG	3 cut(s)	1331, 1514, 1524
BseDI	CCNNGG	5 cut(s)	521, 853, 1330, 1423, 1567
BseGI	GGATG	1 cut(s)	472
BseLI	CCNNNNNNNGG	2 cut(s)	575, 1154
BseMI	GCAATG	2 cut(s)	19, 290
BseMII	CTCAG	4 cut(s)	195, 228, 373, 917
BseNI	ACTGG	1 cut(s)	1159
BseXI	GCAGC	9 cut(s)	4, 167, 178, 813, 825, 853, 909, 997, 1275
BseYI	CCCAGC	1 cut(s)	1284
BsgI	GTGCAG	1 cut(s)	306
BshFI	GGCC	2 cut(s)	930, 1541
BshNI	GGYRCC	1 cut(s)	749
BsiHKAI	GWGCWC	1 cut(s)	1380
BsiHKCI	CYCGRG	2 cut(s)	771, 853
BsiSI	CCGG	6 cut(s)	9, 135, 668, 854, 1040, 1381
BslI	CCNNNNNNNGG	2 cut(s)	575, 1154
BsmAI	GTCTC	2 cut(s)	246, 340
BsmI	GAATGC	2 cut(s)	709, 1002
BsnI	GGCC	2 cut(s)	930, 1541
Bso31I	GGTCTC	1 cut(s)	246
BsoBI	CYCGRG	2 cut(s)	771, 853
Bsp119I	TTCGAA	1 cut(s)	1337
Bsp1286I	GDGCHC	2 cut(s)	1380, 1575
Bsp13I	TCCGGA	1 cut(s)	1380
Bsp143I	GATC	4 cut(s)	380, 658, 687, 1502
Bsp19I	CCATGG	2 cut(s)	521, 1423
BspACI	CCGC	4 cut(s)	25, 165, 671, 962
BspANI	GGCC	2 cut(s)	930, 1541
BspCNI	CTCAG	4 cut(s)	196, 227, 372, 916
BspEI	TCCGGA	1 cut(s)	1380
BspLI	GGNNCC	1 cut(s)	751
BspMAI	CTGCAG	3 cut(s)	22, 178, 843
BspMI	ACCTGC	1 cut(s)	328
BspPI	GGATC	2 cut(s)	388, 1510
BspT104I	TTCGAA	1 cut(s)	1337
BspT107I	GGYRCC	1 cut(s)	749
BspTNI	GGTCTC	1 cut(s)	246
BsrBI	CCGCTC	1 cut(s)	964
BsrDI	GCAATG	2 cut(s)	19, 290
BsrFI	RCCGGY	2 cut(s)	134, 667
BsrI	ACTGG	1 cut(s)	1159
BssAI	RCCGGY	2 cut(s)	134, 667
BssECI	CCNNGG	5 cut(s)	521, 853, 1330, 1423, 1567
BssMI	GATC	4 cut(s)	380, 658, 687, 1502
BssT1I	CCWWGG	3 cut(s)	521, 1423, 1567
Bst2UI	CCWGG	3 cut(s)	1331, 1514, 1524
Bst4CI	ACNGT	5 cut(s)	83, 694, 712, 1269, 1402
BstBAI	YACGTR	1 cut(s)	829
BstBI	TTCGAA	1 cut(s)	1337
BstC8I	GCNNGC	2 cut(s)	178, 242
BstDEI	CTNAG	6 cut(s)	204, 214, 265, 359, 903, 1024
BstDSI	CCRYGG	2 cut(s)	521, 1423
BstF5I	GGATG	1 cut(s)	472
BstKTI	GATC	4 cut(s)	383, 661, 690, 1505
BstMAI	GTCTC	2 cut(s)	246, 340
BstMBI	GATC	4 cut(s)	380, 658, 687, 1502
BstMWI	GCNNNNNNNGC	4 cut(s)	177, 801, 1285, 1294
BstNI	CCWGG	3 cut(s)	1331, 1514, 1524
BstNSI	RCATGY	1 cut(s)	533
BstPAI	GACNNNNGTC	1 cut(s)	1400
BstSCI	CCNGG	5 cut(s)	852, 853, 1329, 1512, 1522
BstSFI	CTRYAG	3 cut(s)	18, 174, 839
BstV1I	GCAGC	9 cut(s)	4, 167, 178, 813, 825, 853, 909, 997, 1275
BstV2I	GAAGAC	1 cut(s)	649
BstXI	CCANNNNNNTGG	1 cut(s)	1424
BsuRI	GGCC	2 cut(s)	930, 1541
BtgI	CCRYGG	2 cut(s)	521, 1423
BtgZI	GCGATG	1 cut(s)	810
BtsCI	GGATG	1 cut(s)	472
BtsI	GCAGTG	1 cut(s)	171
BtsIMutI	CAGTG	5 cut(s)	171, 222, 1233, 1274, 1452
BveI	ACCTGC	1 cut(s)	328
Cac8I	GCNNGC	2 cut(s)	178, 242
Cfr10I	RCCGGY	2 cut(s)	134, 667
Cfr13I	GGNCC	3 cut(s)	141, 929, 1308
Cfr9I	CCCGGG	1 cut(s)	853
CseI	GACGC	1 cut(s)	1285
Csp6I	GTAC	3 cut(s)	277, 750, 968
CviAII	CATG	6 cut(s)	91, 522, 530, 746, 861, 1424
CviQI	GTAC	3 cut(s)	277, 750, 968
DdeI	CTNAG	6 cut(s)	204, 214, 265, 359, 903, 1024
DpnI	GATC	4 cut(s)	382, 660, 689, 1504
DpnII	GATC	4 cut(s)	380, 658, 687, 1502
DraIII	CACNNNGTG	2 cut(s)	83, 1271
DrdI	GACNNNNNNGTC	1 cut(s)	523
DseDI	GACNNNNNNGTC	1 cut(s)	523
EaeI	YGGCCR	1 cut(s)	1539
EciI	GGCGGA	1 cut(s)	180
Ecl136II	GAGCTC	1 cut(s)	1378
Eco130I	CCWWGG	3 cut(s)	521, 1423, 1567
Eco24I	GRGCYC	2 cut(s)	1380, 1575
Eco31I	GGTCTC	1 cut(s)	246
Eco47I	GGWCC	2 cut(s)	141, 1308
Eco53kI	GAGCTC	1 cut(s)	1378
Eco88I	CYCGRG	2 cut(s)	771, 853
EcoICRI	GAGCTC	1 cut(s)	1378
EcoO109I	RGGNCCY	1 cut(s)	141
EcoRII	CCWGG	3 cut(s)	1329, 1512, 1522
EcoT14I	CCWWGG	3 cut(s)	521, 1423, 1567
EcoT38I	GRGCYC	2 cut(s)	1380, 1575
ErhI	CCWWGG	3 cut(s)	521, 1423, 1567
FaeI	CATG	6 cut(s)	94, 525, 533, 749, 864, 1427
FalI	AAGNNNNNCTT	2 cut(s)	454, 486
FatI	CATG	6 cut(s)	90, 521, 529, 745, 860, 1423
FauI	CCCGC	3 cut(s)	18, 664, 969
FblI	GTMKAC	1 cut(s)	1452
Fnu4HI	GCNGC	9 cut(s)	18, 181, 192, 802, 839, 842, 898, 1011, 1289
FokI	GGATG	1 cut(s)	479
FriOI	GRGCYC	2 cut(s)	1380, 1575
Fsp4HI	GCNGC	9 cut(s)	18, 181, 192, 802, 839, 842, 898, 1011, 1289
FspBI	CTAG	6 cut(s)	66, 188, 374, 489, 543, 618
GluI	GCNGC	9 cut(s)	18, 181, 192, 802, 839, 842, 898, 1011, 1289
GsaI	CCCAGC	1 cut(s)	1288
HaeIII	GGCC	2 cut(s)	930, 1541
HapII	CCGG	6 cut(s)	9, 135, 668, 854, 1040, 1381
HgaI	GACGC	1 cut(s)	1285
Hin1II	CATG	6 cut(s)	94, 525, 533, 749, 864, 1427
HincII	GTYRAC	1 cut(s)	1453
HindII	GTYRAC	1 cut(s)	1453
HindIII	AAGCTT	4 cut(s)	59, 328, 822, 1187
HinfI	GANTC	8 cut(s)	269, 285, 485, 517, 783, 1020, 1175, 1517
HpaII	CCGG	6 cut(s)	9, 135, 668, 854, 1040, 1381
HphI	GGTGA	3 cut(s)	309, 878, 1512
Hpy166II	GTNNAC	3 cut(s)	715, 832, 1453
Hpy188I	TCNGA	4 cut(s)	205, 362, 906, 1406
Hpy188III	TCNNGA	8 cut(s)	337, 489, 551, 700, 790, 935, 1370, 1381
Hpy8I	GTNNAC	3 cut(s)	715, 832, 1453
HpyAV	CCTTC	7 cut(s)	154, 268, 986, 1177, 1336, 1420, 1519
HpyCH4III	ACNGT	5 cut(s)	83, 694, 712, 1269, 1402
HpyCH4IV	ACGT	1 cut(s)	828
HpyF10VI	GCNNNNNNNGC	4 cut(s)	177, 801, 1285, 1294
HpyF3I	CTNAG	6 cut(s)	204, 214, 265, 359, 903, 1024
HpySE526I	ACGT	1 cut(s)	828
Hsp92II	CATG	6 cut(s)	94, 525, 533, 749, 864, 1427
Kpn2I	TCCGGA	1 cut(s)	1380
KpnI	GGTACC	1 cut(s)	753
Kzo9I	GATC	4 cut(s)	380, 658, 687, 1502
LmnI	GCTCC	4 cut(s)	300, 589, 887, 1383
Lsp1109I	GCAGC	9 cut(s)	4, 167, 178, 813, 825, 853, 909, 997, 1275
LweI	GCATC	4 cut(s)	457, 507, 1232, 1350
MaeI	CTAG	6 cut(s)	66, 188, 374, 489, 543, 618
MaeII	ACGT	1 cut(s)	828
MaeIII	GTNAC	2 cut(s)	1150, 1273
MalI	GATC	4 cut(s)	382, 660, 689, 1504
MbiI	CCGCTC	1 cut(s)	964
MboI	GATC	4 cut(s)	380, 658, 687, 1502
MboII	GAAGA	6 cut(s)	137, 651, 653, 654, 775, 1572
MhlI	GDGCHC	2 cut(s)	1380, 1575
MlsI	TGGCCA	1 cut(s)	1541
MluCI	AATT	9 cut(s)	209, 561, 814, 1094, 1143, 1161, 1299, 1459, 1578
MluNI	TGGCCA	1 cut(s)	1541
MlyI	GAGTC	2 cut(s)	278, 511
MmeI	TCCRAC	1 cut(s)	967
MnlI	CCTC	8 cut(s)	161, 227, 356, 371, 767, 912, 942, 1071
Mox20I	TGGCCA	1 cut(s)	1541
MroI	TCCGGA	1 cut(s)	1380
MscI	TGGCCA	1 cut(s)	1541
MseI	TTAA	7 cut(s)	393, 494, 917, 977, 1304, 1479, 1584
MslI	CAYNNNNRTG	1 cut(s)	1422
Msp20I	TGGCCA	1 cut(s)	1541
MspA1I	CMGCKG	3 cut(s)	656, 838, 1288
MspI	CCGG	6 cut(s)	9, 135, 668, 854, 1040, 1381
MspR9I	CCNGG	5 cut(s)	854, 855, 1331, 1514, 1524
Mva1269I	GAATGC	2 cut(s)	709, 1002
MvaI	CCWGG	3 cut(s)	1331, 1514, 1524
MwoI	GCNNNNNNNGC	4 cut(s)	177, 801, 1285, 1294
NciI	CCSGG	2 cut(s)	854, 855
NcoI	CCATGG	2 cut(s)	521, 1423
NdeII	GATC	4 cut(s)	380, 658, 687, 1502
NlaIII	CATG	6 cut(s)	94, 525, 533, 749, 864, 1427
NlaIV	GGNNCC	1 cut(s)	751
NmuCI	GTSAC	1 cut(s)	1273
NspI	RCATGY	1 cut(s)	533
NspV	TTCGAA	1 cut(s)	1337
PaeR7I	CTCGAG	1 cut(s)	771
PaqCI	CACCTGC	1 cut(s)	328
PctI	GAATGC	2 cut(s)	709, 1002
PfeI	GAWTC	6 cut(s)	285, 485, 783, 1020, 1175, 1517
PfoI	TCCNGGA	1 cut(s)	1512
PkrI	GCNGC	9 cut(s)	19, 182, 193, 803, 840, 843, 899, 1012, 1290
PleI	GAGTC	2 cut(s)	277, 511
PpsI	GAGTC	2 cut(s)	277, 511
Ppu21I	YACGTR	1 cut(s)	829
PpuMI	RGGWCCY	1 cut(s)	141
PshAI	GACNNNNGTC	1 cut(s)	1400
Psp124BI	GAGCTC	1 cut(s)	1380
Psp5II	RGGWCCY	1 cut(s)	141
Psp6I	CCWGG	3 cut(s)	1329, 1512, 1522
PspFI	CCCAGC	1 cut(s)	1284
PspGI	CCWGG	3 cut(s)	1329, 1512, 1522
PspN4I	GGNNCC	1 cut(s)	751
PspPI	GGNCC	3 cut(s)	141, 929, 1308
PspPPI	RGGWCCY	1 cut(s)	141
PspXI	VCTCGAGB	1 cut(s)	771
PstI	CTGCAG	3 cut(s)	22, 178, 843
PvuII	CAGCTG	3 cut(s)	656, 838, 1288
RsaI	GTAC	3 cut(s)	278, 751, 969
RsaNI	GTAC	3 cut(s)	277, 750, 968
RseI	CAYNNNNRTG	1 cut(s)	1422
SacI	GAGCTC	1 cut(s)	1380
SalI	GTCGAC	1 cut(s)	1451
SaqAI	TTAA	7 cut(s)	393, 494, 917, 977, 1304, 1479, 1584
SatI	GCNGC	9 cut(s)	18, 181, 192, 802, 839, 842, 898, 1011, 1289
Sau3AI	GATC	4 cut(s)	380, 658, 687, 1502
Sau96I	GGNCC	3 cut(s)	141, 929, 1308
ScaI	AGTACT	1 cut(s)	278
SchI	GAGTC	2 cut(s)	278, 511
ScrFI	CCNGG	5 cut(s)	854, 855, 1331, 1514, 1524
SduI	GDGCHC	2 cut(s)	1380, 1575
SfaNI	GCATC	4 cut(s)	457, 507, 1232, 1350
SfcI	CTRYAG	3 cut(s)	18, 174, 839
Sfr274I	CTCGAG	1 cut(s)	771
SfuI	TTCGAA	1 cut(s)	1337
SinI	GGWCC	2 cut(s)	141, 1308
SlaI	CTCGAG	1 cut(s)	771
SmaI	CCCGGG	1 cut(s)	855
SmiMI	CAYNNNNRTG	1 cut(s)	1422
SmlI	CTYRAG	5 cut(s)	771, 933, 1292, 1368, 1486
SmoI	CTYRAG	5 cut(s)	771, 933, 1292, 1368, 1486
Sse9I	AATT	9 cut(s)	209, 561, 814, 1094, 1143, 1161, 1299, 1459, 1578
SsiI	CCGC	4 cut(s)	25, 165, 671, 962
SspI	AATATT	1 cut(s)	40
SspMI	CTAG	6 cut(s)	66, 188, 374, 489, 543, 618
SstI	GAGCTC	1 cut(s)	1380
StyD4I	CCNGG	5 cut(s)	852, 853, 1329, 1512, 1522
StyI	CCWWGG	3 cut(s)	521, 1423, 1567
TaaI	ACNGT	5 cut(s)	83, 694, 712, 1269, 1402
TaiI	ACGT	1 cut(s)	831
TasI	AATT	9 cut(s)	209, 561, 814, 1094, 1143, 1161, 1299, 1459, 1578
TatI	WGTACW	1 cut(s)	276
TfiI	GAWTC	6 cut(s)	285, 485, 783, 1020, 1175, 1517
Tru1I	TTAA	7 cut(s)	393, 494, 917, 977, 1304, 1479, 1584
Tru9I	TTAA	7 cut(s)	393, 494, 917, 977, 1304, 1479, 1584
TscAI	CASTG	5 cut(s)	178, 222, 1233, 1274, 1452
TseFI	GTSAC	1 cut(s)	1273
TseI	GCWGC	9 cut(s)	17, 180, 191, 801, 838, 841, 897, 1010, 1288
Tsp45I	GTSAC	1 cut(s)	1273
TspDTI	ATGAA	9 cut(s)	250, 321, 489, 775, 834, 849, 1087, 1149, 1356
TspGWI	ACGGA	1 cut(s)	1168
TspMI	CCCGGG	1 cut(s)	853
TspRI	CASTG	5 cut(s)	178, 222, 1233, 1274, 1452
VpaK11BI	GGWCC	2 cut(s)	141, 1308
XapI	RAATTY	4 cut(s)	209, 561, 1094, 1578
XbaI	TCTAGA	1 cut(s)	488
XceI	RCATGY	1 cut(s)	533
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1424
XhoI	CTCGAG	1 cut(s)	771
XmaI	CCCGGG	1 cut(s)	853
XmiI	GTMKAC	1 cut(s)	1452
XspI	CTAG	6 cut(s)	66, 188, 374, 489, 543, 618
ZrmI	AGTACT	1 cut(s)	278

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.