GMC oxidoreductase
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| GYF | PF02213 | 550 - 595 | 6.8e-11 | GYF domain |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 3 cut(s) | 322, 3355, 3866 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 4338 |
| AccBSI | CCGCTC | 1 cut(s) | 3331 |
| AccI | GTMKAC | 1 cut(s) | 1104 |
| AcoI | YGGCCR | 9 cut(s) | 481, 2278, 2301, 3122, 3445, 3745, 3814, 4300, 4705 |
| AcuI | CTGAAG | 9 cut(s) | 552, 1356, 1788, 2043, 2648, 2879, 3275, 4389, 4461 |
| AfaI | GTAC | 4 cut(s) | 495, 1491, 2760, 4570 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 737, 1691, 4338, 4358 |
| AflII | CTTAAG | 1 cut(s) | 4622 |
| AflIII | ACRYGT | 1 cut(s) | 2824 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 4391 |
| AjiI | CACGTC | 1 cut(s) | 2373 |
| AleI | CACNNNNGTG | 1 cut(s) | 178 |
| Alw21I | GWGCWC | 2 cut(s) | 3019, 3358 |
| Alw44I | GTGCAC | 2 cut(s) | 3015, 3354 |
| AlwNI | CAGNNNCTG | 5 cut(s) | 641, 2210, 2405, 3040, 3607 |
| Ama87I | CYCGRG | 3 cut(s) | 660, 904, 2681 |
| ApaLI | GTGCAC | 2 cut(s) | 3015, 3354 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1490, 1522 |
| AseI | ATTAAT | 3 cut(s) | 2175, 3615, 3693 |
| Asp700I | GAANNNNTTC | 6 cut(s) | 2395, 3030, 3475, 4309, 4371, 4462 |
| AspS9I | GGNCC | 9 cut(s) | 66, 224, 527, 985, 1345, 1682, 1962, 3153, 4128 |
| AsuII | TTCGAA | 2 cut(s) | 767, 4544 |
| AvaI | CYCGRG | 3 cut(s) | 660, 904, 2681 |
| AvaII | GGWCC | 6 cut(s) | 66, 224, 527, 1345, 3153, 4128 |
| AxyI | CCTNAGG | 1 cut(s) | 1635 |
| BaeGI | GKGCMC | 4 cut(s) | 3019, 3186, 3358, 3400 |
| BalI | TGGCCA | 5 cut(s) | 2280, 3124, 3447, 3747, 3816 |
| BanII | GRGCYC | 2 cut(s) | 552, 4345 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 2016, 2048 |
| BauI | CACGAG | 2 cut(s) | 3012, 3393 |
| BbsI | GAAGAC | 2 cut(s) | 540, 4074 |
| Bbv12I | GWGCWC | 2 cut(s) | 3019, 3358 |
| BbvCI | CCTCAGC | 1 cut(s) | 3129 |
| BceAI | ACGGC | 5 cut(s) | 321, 393, 512, 3307, 4551 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 2492, 2526, 4310, 4344 |
| BclI | TGATCA | 2 cut(s) | 2857, 3565 |
| BfaI | CTAG | 8 cut(s) | 366, 519, 743, 1215, 1602, 1859, 2316, 3756 |
| BfmI | CTRYAG | 4 cut(s) | 1911, 2634, 3932, 4086 |
| BfrI | CTTAAG | 1 cut(s) | 4622 |
| BfuAI | ACCTGC | 3 cut(s) | 322, 3355, 3866 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 4713 |
| BglII | AGATCT | 2 cut(s) | 2641, 3983 |
| BlpI | GCTNAGC | 3 cut(s) | 642, 1992, 2676 |
| Bme18I | GGWCC | 6 cut(s) | 66, 224, 527, 1345, 3153, 4128 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 4391 |
| BmeT110I | CYCGRG | 3 cut(s) | 660, 904, 2681 |
| BmgBI | CACGTC | 1 cut(s) | 2373 |
| BmgT120I | GGNCC | 9 cut(s) | 66, 224, 527, 985, 1345, 1682, 1962, 3153, 4128 |
| BmiI | GGNNCC | 8 cut(s) | 528, 549, 987, 1683, 2113, 3155, 4129, 4344 |
| BmrI | ACTGGG | 2 cut(s) | 172, 711 |
| BmuI | ACTGGG | 2 cut(s) | 172, 711 |
| BpiI | GAAGAC | 2 cut(s) | 540, 4074 |
| BpmI | CTGGAG | 3 cut(s) | 108, 1910, 4014 |
| Bpu10I | CCTNAGC | 2 cut(s) | 1876, 3129 |
| Bpu1102I | GCTNAGC | 3 cut(s) | 642, 1992, 2676 |
| Bpu14I | TTCGAA | 2 cut(s) | 767, 4544 |
| BpuEI | CTTGAG | 7 cut(s) | 984, 1191, 1650, 2739, 2961, 3593, 4155 |
| Bsa29I | ATCGAT | 2 cut(s) | 4614, 4812 |
| BsaAI | YACGTR | 1 cut(s) | 2888 |
| BsaBI | GATNNNNATC | 3 cut(s) | 927, 2646, 3213 |
| BsaI | GGTCTC | 1 cut(s) | 2910 |
| BsaWI | WCCGGW | 2 cut(s) | 3264, 4256 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 737, 1691, 4338, 4358 |
| Bse21I | CCTNAGG | 1 cut(s) | 1635 |
| Bse3DI | GCAATG | 5 cut(s) | 452, 493, 3787, 3970, 4701 |
| Bse8I | GATNNNNATC | 3 cut(s) | 927, 2646, 3213 |
| BseCI | ATCGAT | 2 cut(s) | 4614, 4812 |
| BseJI | GATNNNNATC | 3 cut(s) | 927, 2646, 3213 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 737, 1691, 4338, 4358 |
| BseMI | GCAATG | 5 cut(s) | 452, 493, 3787, 3970, 4701 |
| BseRI | GAGGAG | 8 cut(s) | 26, 31, 235, 995, 1064, 2427, 3257, 4232 |
| BseSI | GKGCMC | 4 cut(s) | 3019, 3186, 3358, 3400 |
| BsgI | GTGCAG | 2 cut(s) | 711, 2115 |
| BshVI | ATCGAT | 2 cut(s) | 4614, 4812 |
| BsiHKAI | GWGCWC | 2 cut(s) | 3019, 3358 |
| BsiHKCI | CYCGRG | 3 cut(s) | 660, 904, 2681 |
| BsiSI | CCGG | 3 cut(s) | 3265, 4257, 4708 |
| BslFI | GGGAC | 5 cut(s) | 446, 848, 1267, 3558, 4379 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 737, 1691, 4338, 4358 |
| BsmBI | CGTCTC | 3 cut(s) | 2363, 4375, 4488 |
| BsmFI | GGGAC | 5 cut(s) | 446, 848, 1267, 3558, 4379 |
| BsmI | GAATGC | 4 cut(s) | 2290, 3775, 4039, 4279 |
| Bso31I | GGTCTC | 1 cut(s) | 2910 |
| BsoBI | CYCGRG | 3 cut(s) | 660, 904, 2681 |
| Bsp119I | TTCGAA | 2 cut(s) | 767, 4544 |
| Bsp1286I | GDGCHC | 6 cut(s) | 552, 3019, 3186, 3358, 3400, 4345 |
| Bsp1720I | GCTNAGC | 3 cut(s) | 642, 1992, 2676 |
| Bsp19I | CCATGG | 2 cut(s) | 3072, 4650 |
| BspDI | ATCGAT | 2 cut(s) | 4614, 4812 |
| BspHI | TCATGA | 1 cut(s) | 3238 |
| BspLI | GGNNCC | 8 cut(s) | 528, 549, 987, 1683, 2113, 3155, 4129, 4344 |
| BspMAI | CTGCAG | 2 cut(s) | 1915, 2638 |
| BspMI | ACCTGC | 3 cut(s) | 322, 3355, 3866 |
| BspQI | GCTCTTC | 1 cut(s) | 3933 |
| BspT104I | TTCGAA | 2 cut(s) | 767, 4544 |
| BspTI | CTTAAG | 1 cut(s) | 4622 |
| BspTNI | GGTCTC | 1 cut(s) | 2910 |
| BsrBI | CCGCTC | 1 cut(s) | 3331 |
| BsrDI | GCAATG | 5 cut(s) | 452, 493, 3787, 3970, 4701 |
| BssNAI | GTATAC | 1 cut(s) | 1105 |
| BssSI | CACGAG | 2 cut(s) | 3012, 3393 |
| BssT1I | CCWWGG | 8 cut(s) | 150, 875, 2918, 3072, 4332, 4519, 4650, 4759 |
| Bst1107I | GTATAC | 1 cut(s) | 1105 |
| Bst2BI | CACGAG | 2 cut(s) | 3012, 3393 |
| Bst6I | CTCTTC | 7 cut(s) | 345, 379, 557, 1579, 3093, 3193, 3933 |
| BstAFI | CTTAAG | 1 cut(s) | 4622 |
| BstBAI | YACGTR | 1 cut(s) | 2888 |
| BstBI | TTCGAA | 2 cut(s) | 767, 4544 |
| BstDSI | CCRYGG | 2 cut(s) | 3072, 4650 |
| BstEII | GGTNACC | 2 cut(s) | 1672, 3173 |
| BstNSI | RCATGY | 3 cut(s) | 2828, 2927, 3059 |
| BstPI | GGTNACC | 2 cut(s) | 1672, 3173 |
| BstSFI | CTRYAG | 4 cut(s) | 1911, 2634, 3932, 4086 |
| BstSLI | GKGCMC | 4 cut(s) | 3019, 3186, 3358, 3400 |
| BstV2I | GAAGAC | 2 cut(s) | 540, 4074 |
| BstX2I | RGATCY | 8 cut(s) | 139, 284, 815, 1529, 2581, 2641, 3983, 4441 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 3824, 3955 |
| BstYI | RGATCY | 8 cut(s) | 139, 284, 815, 1529, 2581, 2641, 3983, 4441 |
| BstZ17I | GTATAC | 1 cut(s) | 1105 |
| Bsu15I | ATCGAT | 2 cut(s) | 4614, 4812 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1635 |
| BsuTUI | ATCGAT | 2 cut(s) | 4614, 4812 |
| BtgI | CCRYGG | 2 cut(s) | 3072, 4650 |
| BtgZI | GCGATG | 2 cut(s) | 3788, 4395 |
| BtrI | CACGTC | 1 cut(s) | 2373 |
| BtsI | GCAGTG | 2 cut(s) | 3958, 4506 |
| BtsIMutI | CAGTG | 7 cut(s) | 185, 607, 3430, 3547, 3958, 4506, 4588 |
| BveI | ACCTGC | 3 cut(s) | 322, 3355, 3866 |
| CaiI | CAGNNNCTG | 5 cut(s) | 641, 2210, 2405, 3040, 3607 |
| CciI | TCATGA | 1 cut(s) | 3238 |
| Cfr13I | GGNCC | 9 cut(s) | 66, 224, 527, 985, 1345, 1682, 1962, 3153, 4128 |
| ClaI | ATCGAT | 2 cut(s) | 4614, 4812 |
| CseI | GACGC | 2 cut(s) | 3599, 4505 |
| Csp6I | GTAC | 4 cut(s) | 494, 1490, 2759, 4569 |
| CviQI | GTAC | 4 cut(s) | 494, 1490, 2759, 4569 |
| DraI | TTTAAA | 1 cut(s) | 4768 |
| DriI | GACNNNNNGTC | 1 cut(s) | 4391 |
| EaeI | YGGCCR | 9 cut(s) | 481, 2278, 2301, 3122, 3445, 3745, 3814, 4300, 4705 |
| Eam1104I | CTCTTC | 7 cut(s) | 345, 379, 557, 1579, 3093, 3193, 3933 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 4391 |
| EarI | CTCTTC | 7 cut(s) | 345, 379, 557, 1579, 3093, 3193, 3933 |
| EciI | GGCGGA | 3 cut(s) | 20, 4553, 4567 |
| Eco130I | CCWWGG | 8 cut(s) | 150, 875, 2918, 3072, 4332, 4519, 4650, 4759 |
| Eco24I | GRGCYC | 2 cut(s) | 552, 4345 |
| Eco31I | GGTCTC | 1 cut(s) | 2910 |
| Eco32I | GATATC | 1 cut(s) | 4437 |
| Eco47I | GGWCC | 6 cut(s) | 66, 224, 527, 1345, 3153, 4128 |
| Eco57I | CTGAAG | 9 cut(s) | 552, 1356, 1788, 2043, 2648, 2879, 3275, 4389, 4461 |
| Eco81I | CCTNAGG | 1 cut(s) | 1635 |
| Eco88I | CYCGRG | 3 cut(s) | 660, 904, 2681 |
| Eco91I | GGTNACC | 2 cut(s) | 1672, 3173 |
| EcoO109I | RGGNCCY | 4 cut(s) | 527, 985, 1345, 3153 |
| EcoO65I | GGTNACC | 2 cut(s) | 1672, 3173 |
| EcoRI | GAATTC | 1 cut(s) | 4246 |
| EcoRV | GATATC | 1 cut(s) | 4437 |
| EcoT14I | CCWWGG | 8 cut(s) | 150, 875, 2918, 3072, 4332, 4519, 4650, 4759 |
| EcoT22I | ATGCAT | 4 cut(s) | 1939, 2802, 3057, 4560 |
| EcoT38I | GRGCYC | 2 cut(s) | 552, 4345 |
| ErhI | CCWWGG | 8 cut(s) | 150, 875, 2918, 3072, 4332, 4519, 4650, 4759 |
| Esp3I | CGTCTC | 3 cut(s) | 2363, 4375, 4488 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 4066, 4098, 4459, 4491 |
| FaqI | GGGAC | 5 cut(s) | 446, 848, 1267, 3558, 4379 |
| FauI | CCCGC | 1 cut(s) | 4116 |
| FbaI | TGATCA | 2 cut(s) | 2857, 3565 |
| FblI | GTMKAC | 1 cut(s) | 1104 |
| FriOI | GRGCYC | 2 cut(s) | 552, 4345 |
| FspBI | CTAG | 8 cut(s) | 366, 519, 743, 1215, 1602, 1859, 2316, 3756 |
| GsuI | CTGGAG | 3 cut(s) | 108, 1910, 4014 |
| HapII | CCGG | 3 cut(s) | 3265, 4257, 4708 |
| HgaI | GACGC | 2 cut(s) | 3599, 4505 |
| HincII | GTYRAC | 1 cut(s) | 2433 |
| HindII | GTYRAC | 1 cut(s) | 2433 |
| HindIII | AAGCTT | 3 cut(s) | 914, 2056, 2729 |
| HpaII | CCGG | 3 cut(s) | 3265, 4257, 4708 |
| Hpy166II | GTNNAC | 9 cut(s) | 1105, 1901, 2433, 2891, 3017, 3356, 3428, 3926, 4516 |
| Hpy8I | GTNNAC | 9 cut(s) | 1105, 1901, 2433, 2891, 3017, 3356, 3428, 3926, 4516 |
| Hpy99I | CGWCG | 3 cut(s) | 32, 342, 1547 |
| HpyCH4IV | ACGT | 4 cut(s) | 1545, 2372, 2887, 3430 |
| HpySE526I | ACGT | 4 cut(s) | 1545, 2372, 2887, 3430 |
| Ksp22I | TGATCA | 2 cut(s) | 2857, 3565 |
| LguI | GCTCTTC | 1 cut(s) | 3933 |
| MaeI | CTAG | 8 cut(s) | 366, 519, 743, 1215, 1602, 1859, 2316, 3756 |
| MaeII | ACGT | 4 cut(s) | 1545, 2372, 2887, 3430 |
| MaeIII | GTNAC | 9 cut(s) | 171, 596, 1201, 1672, 1928, 3066, 3173, 4289, 4771 |
| MbiI | CCGCTC | 1 cut(s) | 3331 |
| MfeI | CAATTG | 4 cut(s) | 2361, 2444, 2780, 3537 |
| MflI | RGATCY | 8 cut(s) | 139, 284, 815, 1529, 2581, 2641, 3983, 4441 |
| MhlI | GDGCHC | 6 cut(s) | 552, 3019, 3186, 3358, 3400, 4345 |
| MlsI | TGGCCA | 5 cut(s) | 2280, 3124, 3447, 3747, 3816 |
| MluNI | TGGCCA | 5 cut(s) | 2280, 3124, 3447, 3747, 3816 |
| MlyI | GAGTC | 8 cut(s) | 212, 616, 659, 1901, 2428, 3770, 4022, 4162 |
| MmeI | TCCRAC | 8 cut(s) | 192, 251, 258, 1557, 1950, 2554, 2957, 4089 |
| Mox20I | TGGCCA | 5 cut(s) | 2280, 3124, 3447, 3747, 3816 |
| Mph1103I | ATGCAT | 4 cut(s) | 1939, 2802, 3057, 4560 |
| MroXI | GAANNNNTTC | 6 cut(s) | 2395, 3030, 3475, 4309, 4371, 4462 |
| MscI | TGGCCA | 5 cut(s) | 2280, 3124, 3447, 3747, 3816 |
| MslI | CAYNNNNRTG | 6 cut(s) | 178, 1443, 2565, 3498, 3531, 3615 |
| Msp20I | TGGCCA | 5 cut(s) | 2280, 3124, 3447, 3747, 3816 |
| MspA1I | CMGCKG | 8 cut(s) | 638, 887, 1960, 2117, 3128, 3250, 3607, 4670 |
| MspCI | CTTAAG | 1 cut(s) | 4622 |
| MspI | CCGG | 3 cut(s) | 3265, 4257, 4708 |
| MunI | CAATTG | 4 cut(s) | 2361, 2444, 2780, 3537 |
| Mva1269I | GAATGC | 4 cut(s) | 2290, 3775, 4039, 4279 |
| NcoI | CCATGG | 2 cut(s) | 3072, 4650 |
| NlaIV | GGNNCC | 8 cut(s) | 528, 549, 987, 1683, 2113, 3155, 4129, 4344 |
| NmuCI | GTSAC | 6 cut(s) | 171, 1201, 1672, 3173, 4289, 4771 |
| NsiI | ATGCAT | 4 cut(s) | 1939, 2802, 3057, 4560 |
| NspI | RCATGY | 3 cut(s) | 2828, 2927, 3059 |
| NspV | TTCGAA | 2 cut(s) | 767, 4544 |
| OliI | CACNNNNGTG | 1 cut(s) | 178 |
| PaeI | GCATGC | 1 cut(s) | 3059 |
| PaeR7I | CTCGAG | 1 cut(s) | 2681 |
| PagI | TCATGA | 1 cut(s) | 3238 |
| PasI | CCCWGGG | 4 cut(s) | 784, 866, 1678, 3400 |
| PciI | ACATGT | 1 cut(s) | 2824 |
| PciSI | GCTCTTC | 1 cut(s) | 3933 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 24, 3770 |
| PctI | GAATGC | 4 cut(s) | 2290, 3775, 4039, 4279 |
| PdmI | GAANNNNTTC | 6 cut(s) | 2395, 3030, 3475, 4309, 4371, 4462 |
| PflFI | GACNNNGTC | 1 cut(s) | 2374 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 4338 |
| PfoI | TCCNGGA | 2 cut(s) | 62, 2098 |
| PleI | GAGTC | 8 cut(s) | 211, 615, 658, 1900, 2428, 3769, 4021, 4162 |
| PpsI | GAGTC | 8 cut(s) | 211, 615, 658, 1900, 2428, 3769, 4021, 4162 |
| Ppu21I | YACGTR | 1 cut(s) | 2888 |
| PpuMI | RGGWCCY | 3 cut(s) | 527, 1345, 3153 |
| PscI | ACATGT | 1 cut(s) | 2824 |
| PshBI | ATTAAT | 3 cut(s) | 2175, 3615, 3693 |
| Psp5II | RGGWCCY | 3 cut(s) | 527, 1345, 3153 |
| PspEI | GGTNACC | 2 cut(s) | 1672, 3173 |
| PspN4I | GGNNCC | 8 cut(s) | 528, 549, 987, 1683, 2113, 3155, 4129, 4344 |
| PspPI | GGNCC | 9 cut(s) | 66, 224, 527, 985, 1345, 1682, 1962, 3153, 4128 |
| PspPPI | RGGWCCY | 3 cut(s) | 527, 1345, 3153 |
| PspXI | VCTCGAGB | 1 cut(s) | 2681 |
| PstI | CTGCAG | 2 cut(s) | 1915, 2638 |
| PstNI | CAGNNNCTG | 5 cut(s) | 641, 2210, 2405, 3040, 3607 |
| PsuI | RGATCY | 8 cut(s) | 139, 284, 815, 1529, 2581, 2641, 3983, 4441 |
| PsyI | GACNNNGTC | 1 cut(s) | 2374 |
| PvuII | CAGCTG | 6 cut(s) | 638, 887, 3128, 3250, 3607, 4670 |
| RsaI | GTAC | 4 cut(s) | 495, 1491, 2760, 4570 |
| RsaNI | GTAC | 4 cut(s) | 494, 1490, 2759, 4569 |
| RseI | CAYNNNNRTG | 6 cut(s) | 178, 1443, 2565, 3498, 3531, 3615 |
| SapI | GCTCTTC | 1 cut(s) | 3933 |
| Sau96I | GGNCC | 9 cut(s) | 66, 224, 527, 985, 1345, 1682, 1962, 3153, 4128 |
| SchI | GAGTC | 8 cut(s) | 212, 616, 659, 1901, 2428, 3770, 4022, 4162 |
| SduI | GDGCHC | 6 cut(s) | 552, 3019, 3186, 3358, 3400, 4345 |
| SfcI | CTRYAG | 4 cut(s) | 1911, 2634, 3932, 4086 |
| Sfr274I | CTCGAG | 1 cut(s) | 2681 |
| SfuI | TTCGAA | 2 cut(s) | 767, 4544 |
| SinI | GGWCC | 6 cut(s) | 66, 224, 527, 1345, 3153, 4128 |
| SlaI | CTCGAG | 1 cut(s) | 2681 |
| SmiMI | CAYNNNNRTG | 6 cut(s) | 178, 1443, 2565, 3498, 3531, 3615 |
| SmlI | CTYRAG | 9 cut(s) | 999, 1206, 1665, 2681, 2754, 2976, 3572, 4170, 4622 |
| SmoI | CTYRAG | 9 cut(s) | 999, 1206, 1665, 2681, 2754, 2976, 3572, 4170, 4622 |
| SphI | GCATGC | 1 cut(s) | 3059 |
| SspI | AATATT | 3 cut(s) | 421, 1141, 4372 |
| SspMI | CTAG | 8 cut(s) | 366, 519, 743, 1215, 1602, 1859, 2316, 3756 |
| StyI | CCWWGG | 8 cut(s) | 150, 875, 2918, 3072, 4332, 4519, 4650, 4759 |
| TaiI | ACGT | 4 cut(s) | 1548, 2375, 2890, 3433 |
| TatI | WGTACW | 1 cut(s) | 2758 |
| TauI | GCSGC | 3 cut(s) | 149, 486, 1963 |
| TscAI | CASTG | 7 cut(s) | 185, 607, 3430, 3554, 3958, 4506, 4588 |
| TseFI | GTSAC | 6 cut(s) | 171, 1201, 1672, 3173, 4289, 4771 |
| Tsp45I | GTSAC | 6 cut(s) | 171, 1201, 1672, 3173, 4289, 4771 |
| TspRI | CASTG | 7 cut(s) | 185, 607, 3430, 3554, 3958, 4506, 4588 |
| Tth111I | GACNNNGTC | 1 cut(s) | 2374 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 4338 |
| Vha464I | CTTAAG | 1 cut(s) | 4622 |
| VneI | GTGCAC | 2 cut(s) | 3015, 3354 |
| VpaK11BI | GGWCC | 6 cut(s) | 66, 224, 527, 1345, 3153, 4128 |
| VspI | ATTAAT | 3 cut(s) | 2175, 3615, 3693 |
| XceI | RCATGY | 3 cut(s) | 2828, 2927, 3059 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 3740, 4667 |
| XhoI | CTCGAG | 1 cut(s) | 2681 |
| XmiI | GTMKAC | 1 cut(s) | 1104 |
| XmnI | GAANNNNTTC | 6 cut(s) | 2395, 3030, 3475, 4309, 4371, 4462 |
| XspI | CTAG | 8 cut(s) | 366, 519, 743, 1215, 1602, 1859, 2316, 3756 |
| Zsp2I | ATGCAT | 4 cut(s) | 1939, 2802, 3057, 4560 |