Prupe.1G275800_v2.0.a1

GMC oxidoreductase

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Reverse (-)
28122517 .. 28124906
2390 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G275800.1

Sequence Viewer

Length: 1554 bp
ATGGGCTTTTCATTTTATCTGCTCCTCCTATTTGTTGACTTGGCTTTATGTTCCTCATGGCTTCAAGGACGAACGCTTCCCCATATGACTTCAGATGTCAATGACCTCTCAGGCAAGTCCTTCGATTACATTGTCGTTGGAGGAGGCACCGCTGGCTGTCCCCTAGCTGCAACCCTCTCTGAGAAATTCTCAGTGCTCTTGGTGGAACGAGGTAGCTCACCATATGGAAATCCCTTGGTGTTGGAAACAAAGAACTATGGGCTCTCATTGCTTCAAACTGATAAATATACATCAGTTGCACAGAGCTTTATCTCCAATGACGGTGTTCCCAATCTCAGAGGAAGAGTTCTAGGAGGATCATCTGCTATAAATGGTGGGTTTTATAGTAGAGCAAGTGAGGATTTTGTCCAAAAAGTTGGGTGGGATAAGGAGGCGGTAATGGGTGCTTATCAATGGGTGGAGTCGAGAATTGTCTTTAAACCTGAATTGACCCCATGGCAGTATGTTGCTGAGTTTAGCTTTCTTGAAGCAGGAATTTTCCCATATAATGGTTTTAGTTTGGAGCATATTGAGGGAACAAAGGTTGGTGGGAGTGTATTTGATGAATGGGGACGAAGACACACGTCAGCTGATCTTCTAGAGGCAGGGAATCCAAACAACATCACAGTTCTTTTAAATGCAACTGTGAAGAATGTCATCTTTCGTGAAAAAGGTAACAGAAATGAGACAATAGCTAGAGGCATAAGATTCATCAAGAGCGACGGCAATTCGAGCCAAACTTACGATGCTTACCTCAACCAGCCAGAGAACTCATGTTCATGGGGTGATGTGATACTAGCAGCAGGGGCCTTAGGCAGCCCTCAGATTTTATTGTTAAGTGGCATTGGCCCTCAGAAACATATAAAGAAGTTCAATATCCAACTAGCAGCCGACTTAAAGGGGGTTGGAAAAGGAATGAAAGACAATCCTGGCATTGCACTCTTAGCTGACTCTAAGCCCAAAAATTTCCCACCAGAACCTCCAAAAGTTGTCGGCATAGCAGATCACTTCAAAATCATAATTGAGGCAGGAATTTTACCTATTAGCCTCAATGCAACAGTAATGCCAATTGCTGCCAAACTTGCGTTTCCAGAATCAGAAGGAAAGCTAGAACTGAACAGCACAGACCCCAGAGAAAACCCATCAGTGACTTTTAACTATCTAGCAAAGGAAAAGGATTGGGCAAGATGCGTAAAGCTAGGGCAGTTGCTTGAGCGAGTTGTAAGGTCTGAATCAATTGCTTTCTTCCTGGGGTTGGAACGCAAAAATGAGTTGATGTCCACTGAAGATGAGCTAAGAAAATTGTGCAAGAAGAATGTGAGGACCTTCTACCACTATCATGGTGGTTGCTCTGTGGGGTCAGTTGTTGACAAAGATTACAGGGTATATGGTGTGAAGGGGTTAAGAGTAGTTGATGGATCAACCTTCCTGGAATCACCAGGCACAAATCCAATGGCCACCCTGTTGATGCTTGGAAGGTACCAAGGGATCAAGATTCTTGAAGATAGAAATTAA

Protein Analysis

518

Amino Acids

56.69

Weight (kDa)

7.58

Isoelectric Point (pI)

31.88

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000426)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G14185 AT1G14190 AT1G14190
fragaria_vesca FvH4_4g31240
malus_domestica MD13G1071000.v1.1 MD13G1071100.v1.1 MD16G1071700.v1.1 MD16G1071800.v1.1
prunus_persica Prupe.1G275800_v2.0.a1
pyrus_communis pycom13g06360 pycom13g06370 pycom16g06200
rosa_chinensis RchiOBHm_Chr1g0339361 RchiOBHm_Chr1g0339551 RchiOBHm_Chr4g0439631 RchiOBHm_Chr4g0439641 RchiOBHm_Chr4g0439661 RchiOBHm_Chr4g0439681 RchiOBHm_Chr5g0043441 RchiOBHm_Chr5g0076991
rosa_laevigata RLG00000006247 RLG00000006249 RLG00000006250 RLG00000006251 RLG00000006252 RLG00000029228 RLG00000029236 RLG00000034187 RLG00000036640
rosa_multiflora Rmu_co8382505.1_g000001 Rmu_co8503591.1_g000001 Rmu_sc0000613.1_g000004 Rmu_sc0000729.1_g000011 Rmu_sc0002549.1_g000002 Rmu_sc0002549.1_g000008 Rmu_sc0004655.1_g000021 Rmu_sc0005220.1_g000001 Rmu_sc0007322.1_g000009 Rmu_sc0008285.1_g000002 Rmu_sc0009495.1_g000002 Rmu_ssc0000067.1_g000054
rosa_roxburghii Rroxscaffold_1G00005160 Rroxscaffold_1G00037450 Rroxscaffold_4G00313450 Rroxscaffold_4G00313520 Rroxscaffold_5G00380580 Rroxscaffold_5G00380590
rosa_rugosa Rorug01G0141000.1 Rorug01G0142300.1 Rorug01G0142400.1 Rorug04G0320400 Rorug04G0320500 Rorug04G0320500 Rorug04G0320800 Rorug04G0320900 Rorug05G0205800 Rorug05G0449900
rosa_samantha Rh1AG158500 Rh1AG159100 Rh1BG126000 Rh1CG108300 Rh1CG147800 Rh1CG148300 Rh1DG116900 Rh4AG371400 Rh4AG371500 Rh4AG371600 Rh4AG371700 Rh4BG383200 Rh4BG383300 Rh4BG383400 Rh4BG383700 Rh4CG397800 Rh4CG398000 Rh4CG398100 Rh4CG398400 Rh4DG378000 Rh4DG378100 Rh4DG378200 Rh5AG291600 Rh5AG454300 Rh5AG504700 Rh5BG298300 Rh5BG526400 Rh5CG327800 Rh5CG550200 Rh5DG307600 Rh5DG538500
rosa_wichuraiana Rw1G013210 Rw1G013570 Rw4G031660 Rw4G031680 Rw4G031690 Rw4G031710 Rw5G027060 Rw5G047170

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 1518
AccB1I GGYRCC 2 cut(s) 146, 1518
AccB7I CCANNNNNTGG 1 cut(s) 548
AciI CCGC 2 cut(s) 150, 434
AclWI GGATC 3 cut(s) 364, 1465, 1535
AcoI YGGCCR 1 cut(s) 1494
AcsI RAATTY 4 cut(s) 185, 534, 1003, 1071
AcuI CTGAAG 2 cut(s) 75, 1344
AfaI GTAC 1 cut(s) 1520
AfiI CCNNNNNNNGG 2 cut(s) 548, 1294
AflIII ACRYGT 1 cut(s) 621
AgsI TTSAA 6 cut(s) 65, 275, 527, 913, 1051, 1541
AjiI CACGTC 1 cut(s) 624
AjnI CCWGG 4 cut(s) 967, 1287, 1467, 1477
Alw21I GWGCWC 1 cut(s) 198
Alw26I GTCTC 1 cut(s) 719
AlwI GGATC 3 cut(s) 364, 1465, 1535
AoxI GGCC 3 cut(s) 846, 886, 1494
ApeKI GCWGC 5 cut(s) 167, 839, 855, 926, 1112
ApoI RAATTY 4 cut(s) 185, 534, 1003, 1071
Asp718I GGTACC 1 cut(s) 1518
AspS9I GGNCC 3 cut(s) 846, 887, 1362
AsuHPI GGTGA 3 cut(s) 210, 836, 1467
AvaII GGWCC 1 cut(s) 1362
AxyI CCTNAGG 1 cut(s) 850
BalI TGGCCA 1 cut(s) 1496
BanI GGYRCC 2 cut(s) 146, 1518
BanII GRGCYC 1 cut(s) 264
BbsI GAAGAC 1 cut(s) 622
Bbv12I GWGCWC 1 cut(s) 198
BbvI GCAGC 5 cut(s) 154, 851, 867, 938, 1099
BccI CCATC 2 cut(s) 1189, 1448
BceAI ACGGC 1 cut(s) 778
BcgI CGANNNNNNTGC 2 cut(s) 103, 137
BciT130I CCWGG 4 cut(s) 969, 1289, 1469, 1479
BcoDI GTCTC 1 cut(s) 719
BfaI CTAG 9 cut(s) 164, 350, 638, 735, 836, 923, 1148, 1202, 1238
BisI GCNGC 5 cut(s) 168, 840, 856, 927, 1113
BlsI GCNGC 5 cut(s) 169, 841, 857, 928, 1114
Bme1390I CCNGG 4 cut(s) 969, 1289, 1469, 1479
Bme18I GGWCC 1 cut(s) 1362
BmgBI CACGTC 1 cut(s) 624
BmgT120I GGNCC 3 cut(s) 846, 887, 1362
BmiI GGNNCC 3 cut(s) 148, 847, 1520
BmrFI CCNGG 4 cut(s) 969, 1289, 1469, 1479
BmsI GCATC 3 cut(s) 775, 1217, 1497
BoxI GACNNNNGTC 1 cut(s) 622
BpiI GAAGAC 1 cut(s) 622
BplI GAGNNNNNCTC 2 cut(s) 173, 205
BpuEI CTTGAG 1 cut(s) 1271
BsaJI CCNNGG 4 cut(s) 234, 494, 1288, 1522
Bsc4I CCNNNNNNNGG 2 cut(s) 548, 1294
Bse21I CCTNAGG 1 cut(s) 850
Bse3DI GCAATG 2 cut(s) 266, 972
BseBI CCWGG 4 cut(s) 969, 1289, 1469, 1479
BseDI CCNNGG 4 cut(s) 234, 494, 1288, 1522
BseLI CCNNNNNNNGG 2 cut(s) 548, 1294
BseMI GCAATG 2 cut(s) 266, 972
BseMII CTCAG 7 cut(s) 123, 171, 204, 349, 501, 875, 905
BseRI GAGGAG 2 cut(s) 14, 156
BseXI GCAGC 5 cut(s) 154, 851, 867, 938, 1099
BshFI GGCC 3 cut(s) 848, 888, 1496
BshNI GGYRCC 2 cut(s) 146, 1518
BsiHKAI GWGCWC 1 cut(s) 198
BslFI GGGAC 2 cut(s) 144, 624
BslI CCNNNNNNNGG 2 cut(s) 548, 1294
BsmAI GTCTC 1 cut(s) 719
BsmFI GGGAC 2 cut(s) 144, 624
BsnI GGCC 3 cut(s) 848, 888, 1496
Bsp1286I GDGCHC 2 cut(s) 198, 264
Bsp143I GATC 5 cut(s) 356, 631, 1042, 1457, 1527
Bsp19I CCATGG 1 cut(s) 494
BspACI CCGC 2 cut(s) 150, 434
BspANI GGCC 3 cut(s) 848, 888, 1496
BspCNI CTCAG 7 cut(s) 122, 172, 203, 348, 502, 874, 904
BspLI GGNNCC 3 cut(s) 148, 847, 1520
BspPI GGATC 3 cut(s) 364, 1465, 1535
BspT107I GGYRCC 2 cut(s) 146, 1518
BsrDI GCAATG 2 cut(s) 266, 972
BssECI CCNNGG 4 cut(s) 234, 494, 1288, 1522
BssMI GATC 5 cut(s) 356, 631, 1042, 1457, 1527
BssT1I CCWWGG 3 cut(s) 234, 494, 1522
Bst2UI CCWGG 4 cut(s) 969, 1289, 1469, 1479
Bst4CI ACNGT 4 cut(s) 323, 667, 685, 1099
Bst6I CTCTTC 1 cut(s) 337
BstC8I GCNNGC 1 cut(s) 154
BstDSI CCRYGG 1 cut(s) 494
BstKTI GATC 5 cut(s) 359, 634, 1045, 1460, 1530
BstMAI GTCTC 1 cut(s) 719
BstMBI GATC 5 cut(s) 356, 631, 1042, 1457, 1527
BstMWI GCNNNNNNNGC 6 cut(s) 153, 268, 771, 845, 983, 1121
BstNI CCWGG 4 cut(s) 969, 1289, 1469, 1479
BstPAI GACNNNNGTC 1 cut(s) 622
BstSCI CCNGG 4 cut(s) 967, 1287, 1467, 1477
BstV1I GCAGC 5 cut(s) 154, 851, 867, 938, 1099
BstV2I GAAGAC 1 cut(s) 622
BstXI CCANNNNNNTGG 2 cut(s) 416, 1379
Bsu36I CCTNAGG 1 cut(s) 850
BsuRI GGCC 3 cut(s) 848, 888, 1496
BtgI CCRYGG 1 cut(s) 494
BtrI CACGTC 1 cut(s) 624
BtsIMutI CAGTG 3 cut(s) 198, 1191, 1320
Cac8I GCNNGC 1 cut(s) 154
Cfr13I GGNCC 3 cut(s) 846, 887, 1362
Csp6I GTAC 1 cut(s) 1519
CviAII CATG 5 cut(s) 57, 495, 813, 819, 1379
CviQI GTAC 1 cut(s) 1519
DpnI GATC 5 cut(s) 358, 633, 1044, 1459, 1529
DpnII GATC 5 cut(s) 356, 631, 1042, 1457, 1527
DraI TTTAAA 2 cut(s) 478, 675
EaeI YGGCCR 1 cut(s) 1494
Eam1104I CTCTTC 1 cut(s) 337
EarI CTCTTC 1 cut(s) 337
Eco130I CCWWGG 3 cut(s) 234, 494, 1522
Eco24I GRGCYC 1 cut(s) 264
Eco47I GGWCC 1 cut(s) 1362
Eco57I CTGAAG 2 cut(s) 75, 1344
Eco81I CCTNAGG 1 cut(s) 850
EcoO109I RGGNCCY 2 cut(s) 846, 1362
EcoRII CCWGG 4 cut(s) 967, 1287, 1467, 1477
EcoT14I CCWWGG 3 cut(s) 234, 494, 1522
EcoT38I GRGCYC 1 cut(s) 264
ErhI CCWWGG 3 cut(s) 234, 494, 1522
FaeI CATG 5 cut(s) 60, 498, 816, 822, 1382
FaqI GGGAC 2 cut(s) 144, 624
FatI CATG 5 cut(s) 56, 494, 812, 818, 1378
FauNDI CATATG 2 cut(s) 84, 223
Fnu4HI GCNGC 5 cut(s) 168, 840, 856, 927, 1113
FriOI GRGCYC 1 cut(s) 264
Fsp4HI GCNGC 5 cut(s) 168, 840, 856, 927, 1113
FspBI CTAG 9 cut(s) 164, 350, 638, 735, 836, 923, 1148, 1202, 1238
GluI GCNGC 5 cut(s) 168, 840, 856, 927, 1113
HaeIII GGCC 3 cut(s) 848, 888, 1496
Hin1II CATG 5 cut(s) 60, 498, 816, 822, 1382
HincII GTYRAC 2 cut(s) 37, 1408
HindII GTYRAC 2 cut(s) 37, 1408
HinfI GANTC 8 cut(s) 461, 649, 747, 989, 1133, 1271, 1472, 1534
HphI GGTGA 3 cut(s) 210, 836, 1467
Hpy166II GTNNAC 3 cut(s) 37, 1320, 1408
Hpy188I TCNGA 7 cut(s) 94, 181, 338, 864, 894, 1138, 1270
Hpy188III TCNNGA 8 cut(s) 465, 524, 638, 704, 754, 1130, 1531, 1538
Hpy8I GTNNAC 3 cut(s) 37, 1320, 1408
Hpy99I CGWCG 1 cut(s) 764
HpyAV CCTTC 6 cut(s) 130, 1133, 1375, 1429, 1474, 1509
HpyCH4III ACNGT 4 cut(s) 323, 667, 685, 1099
HpyCH4IV ACGT 1 cut(s) 623
HpyCH4V TGCA 6 cut(s) 170, 299, 680, 977, 1094, 1347
HpyF10VI GCNNNNNNNGC 6 cut(s) 153, 268, 771, 845, 983, 1121
HpySE526I ACGT 1 cut(s) 623
Hsp92II CATG 5 cut(s) 60, 498, 816, 822, 1382
KpnI GGTACC 1 cut(s) 1522
Kzo9I GATC 5 cut(s) 356, 631, 1042, 1457, 1527
LmnI GCTCC 2 cut(s) 27, 562
Lsp1109I GCAGC 5 cut(s) 154, 851, 867, 938, 1099
LweI GCATC 3 cut(s) 775, 1217, 1497
MaeI CTAG 9 cut(s) 164, 350, 638, 735, 836, 923, 1148, 1202, 1238
MaeII ACGT 1 cut(s) 623
MaeIII GTNAC 2 cut(s) 713, 1186
MalI GATC 5 cut(s) 358, 633, 1044, 1459, 1529
MboI GATC 5 cut(s) 356, 631, 1042, 1457, 1527
MboII GAAGA 8 cut(s) 354, 626, 627, 700, 1276, 1337, 1363, 1553
MfeI CAATTG 2 cut(s) 1107, 1275
MhlI GDGCHC 2 cut(s) 198, 264
MlsI TGGCCA 1 cut(s) 1496
MluNI TGGCCA 1 cut(s) 1496
MlyI GAGTC 2 cut(s) 470, 983
MmeI TCCRAC 5 cut(s) 118, 222, 925, 943, 1275
Mox20I TGGCCA 1 cut(s) 1496
MscI TGGCCA 1 cut(s) 1496
MseI TTAA 7 cut(s) 477, 674, 875, 935, 1194, 1442, 1552
MslI CAYNNNNRTG 2 cut(s) 817, 1377
Msp20I TGGCCA 1 cut(s) 1496
MspA1I CMGCKG 2 cut(s) 152, 629
MspR9I CCNGG 4 cut(s) 969, 1289, 1469, 1479
MunI CAATTG 2 cut(s) 1107, 1275
MvaI CCWGG 4 cut(s) 969, 1289, 1469, 1479
MwoI GCNNNNNNNGC 6 cut(s) 153, 268, 771, 845, 983, 1121
NcoI CCATGG 1 cut(s) 494
NdeI CATATG 2 cut(s) 84, 223
NdeII GATC 5 cut(s) 356, 631, 1042, 1457, 1527
NlaIII CATG 5 cut(s) 60, 498, 816, 822, 1382
NlaIV GGNNCC 3 cut(s) 148, 847, 1520
NmuCI GTSAC 1 cut(s) 1186
PfeI GAWTC 6 cut(s) 649, 747, 1133, 1271, 1472, 1534
PflMI CCANNNNNTGG 1 cut(s) 548
PfoI TCCNGGA 1 cut(s) 1467
PkrI GCNGC 5 cut(s) 169, 841, 857, 928, 1114
PleI GAGTC 2 cut(s) 469, 983
PpsI GAGTC 2 cut(s) 469, 983
PpuMI RGGWCCY 1 cut(s) 1362
PshAI GACNNNNGTC 1 cut(s) 622
Psp5II RGGWCCY 1 cut(s) 1362
Psp6I CCWGG 4 cut(s) 967, 1287, 1467, 1477
PspGI CCWGG 4 cut(s) 967, 1287, 1467, 1477
PspN4I GGNNCC 3 cut(s) 148, 847, 1520
PspPI GGNCC 3 cut(s) 846, 887, 1362
PspPPI RGGWCCY 1 cut(s) 1362
PvuII CAGCTG 1 cut(s) 629
RsaI GTAC 1 cut(s) 1520
RsaNI GTAC 1 cut(s) 1519
RseI CAYNNNNRTG 2 cut(s) 817, 1377
SaqAI TTAA 7 cut(s) 477, 674, 875, 935, 1194, 1442, 1552
SatI GCNGC 5 cut(s) 168, 840, 856, 927, 1113
Sau3AI GATC 5 cut(s) 356, 631, 1042, 1457, 1527
Sau96I GGNCC 3 cut(s) 846, 887, 1362
SchI GAGTC 2 cut(s) 470, 983
ScrFI CCNGG 4 cut(s) 969, 1289, 1469, 1479
SduI GDGCHC 2 cut(s) 198, 264
SfaNI GCATC 3 cut(s) 775, 1217, 1497
SinI GGWCC 1 cut(s) 1362
SmiMI CAYNNNNRTG 2 cut(s) 817, 1377
SmlI CTYRAG 1 cut(s) 1250
SmoI CTYRAG 1 cut(s) 1250
SsiI CCGC 2 cut(s) 150, 434
SspMI CTAG 9 cut(s) 164, 350, 638, 735, 836, 923, 1148, 1202, 1238
StyD4I CCNGG 4 cut(s) 967, 1287, 1467, 1477
StyI CCWWGG 3 cut(s) 234, 494, 1522
TaaI ACNGT 4 cut(s) 323, 667, 685, 1099
TaiI ACGT 1 cut(s) 626
TaqI TCGA 3 cut(s) 123, 464, 770
TfiI GAWTC 6 cut(s) 649, 747, 1133, 1271, 1472, 1534
Tru1I TTAA 7 cut(s) 477, 674, 875, 935, 1194, 1442, 1552
Tru9I TTAA 7 cut(s) 477, 674, 875, 935, 1194, 1442, 1552
TscAI CASTG 3 cut(s) 198, 1191, 1327
TseFI GTSAC 1 cut(s) 1186
TseI GCWGC 5 cut(s) 167, 839, 855, 926, 1112
Tsp45I GTSAC 1 cut(s) 1186
TspDTI ATGAA 4 cut(s) 618, 739, 807, 971
TspRI CASTG 3 cut(s) 198, 1191, 1327
Van91I CCANNNNNTGG 1 cut(s) 548
VpaK11BI GGWCC 1 cut(s) 1362
XapI RAATTY 4 cut(s) 185, 534, 1003, 1071
XbaI TCTAGA 1 cut(s) 637
XcmI CCANNNNNNNNNTGG 1 cut(s) 1379
XspI CTAG 9 cut(s) 164, 350, 638, 735, 836, 923, 1148, 1202, 1238
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.