Rorug04G0320500

GMC oxidoreductase

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000004
Physical Location & Seq
Reverse (-)
49421019 .. 49428223
7205 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug04G0320500.1

Sequence Viewer

Length: 2349 bp
ATGTCCTCCGCAGTCAAGCAAGAAATCCCGGAACTCTCCTCCGCCGAGAAAACCACCGGAATCCCCAATCCATCGCCGATCGACATCAGCAGCGACAGCGAGAGCAGTAGTAACTCCGTCGATTCTTCTTCTGACATCGACGACCTAGAGACCACTTCCTTGATCGAGTCCATCACGTGCAAGTCAAGGAACGAACGTAACTTCGATGAAGCCCCTCCGGCGAAGAAAACGAAACGAGAAGGCGAATCCTCATTGCCGCTAGGGTTTCCGGAACCGGTGCCGCTCAACTTGCCGGTGACGGCGGCGGTGCCGTTGGCAATGGCTCGGGTGTTGCCGGACTCAACGTGCGTGACACGGAAAATTGGGGATAAAAATAGTAATAATATCAATATGAATGATAATCAAGTAGGTCCAGTTTTACGGGGTTGCAAGCAGTTTTGGAAAGCTGGGGATTATGAGGGTGACAAGGACAACGATGCTAATTCTGCCTTTTCTTCCGTTGGCATGGATCATGCGAGAATTCACCCTAGGTTTCTGCATTCGAATGCCACCAGTCACAAATGGGCTTTGGGAGCTTTTGCAGAGCTGCTAGACAATTCTTTGGATGAGGTCTGCAATGGAGCCACTTATGTTAATATTGACATGGCAAGAAATAAAAAAGATGGTAATCTGATGATTGAGGTCGAAGATAATGGTGGTGGAATGACTCCTGATAAAATGAGACAGTGCATGTCTCTTGGGTATTCAGCAAAAAGCAAAATGGCAAATACAATTGGTCAATATGGCAATGGGTTTAAGACTAGTACTATGAGACTTGGAGCAGATGTTATAGTGTTCTCTCGTTGTCAGGGGATTAATGGAACAAGCCCCACACAGACCATTGGACTGCTATCTTACAATTTCCTGAGGGGTACTGGAAAGGAAGATATAGTTGTTCCCATGATTGACTATGAGAAAAGTGGTCGAGGTTGGAACAAGATGATGCGGGCTTCTCCAGATGATTGGACAAGAAATTTAGCAACCATTGTGCAGTGGTCTCCTTATTCTAGTGAAGAAGATCTTCTTCAGCAATTTAAGTTATTTAGAGGGCATGGCACACGGATAGTAATATACAACCTTTGGGAGGATGATGAAGGACATCTGGAACTTGATTTTGATACTGATCCCCATGACATTCAAATTAGAGGAGTCAACAGGGATGAGAAGAGCATTCAGATGTCAAAAAAATATCCCAATTCTAGACACTTTTTAACTTATCGACACTCATTGAGGAGTTATGCATCAATTCTCTATCTCAGGCTTCCATCTCACTTTAGAATTATTCTGCGCGGGCAAGATATCAAACATCACAATATAGTGAATGACATGATGATGACGAAGGTGGTGACGTACAGACCTGTAAATCTCCCAGAGGGAATGCCAAAAGATTCAAATATGGCTGCCAAAGTGACTCTTGGGTTTGTGAAGGATGCACGCTCTCATATTGATATCCAAGGGTTCAACGTTTATCATAAAAATAGACTGATTAAGCCTTTTTGGCGTGTTTGGAATGCTGCAGGCAGTGATGGTCGTGGAGTTATAGGTGTGTTGGAAGCTAATTTTGTTGAACCAGCTCACGACAAACAGGGCTTTGAGCGGACAAATGTTCTTCAAAGACTTGAGCAACGATTGATTGGAATGCAAAAGGAGTTCTGGTCTAAAAATTGCCAGATTGTTGGCTATGCTCCAAGAAGACGTACTAGTGACTTTCCAGAAAGAGATTCTTCAGTATCTGATAAAGAGAAATCACCCAGAAATCAGAATGGTCATGGTTCTAGTAGTGGAGGGTTTAAGGCAAGCTCAAGTAAAAAACTCAAAAAAGGATCATCGCCTGTGAATGCTGAAAGTGAAGATGGGAACTGTAATGAGGCATTGCATGCTTCCATTAAACCTCAGCAAGATCATGCGTCAGACTCAAGGGAGGTTCGCATACCTTTGAAAATAGCTGATACAAATGGAGAGGGACAAGTCACGACAGACCATGTAATTGAGCGTTCGATTATGTTGAGAACAGATTCATCGATTGTGGAAAGATTGGAGGAGGCTCTAAATGATCTCAATCATGAAAGAGATAGCTGTAAATCTCTTAAAACTGAACTTGAGAAGGCAAACGAAAGAATAGAAGAGTTGGACAAAGAGCAAGAAGCACTTATTCAGATACTAGTAGCAGAAAAGACTGAAAGAGAACAGGAGGAAGAACGACTCAGGAAAAGCCTAACGGATGCTTCTAAAACCATTGATGAGCTGCTTGAGAAGGTGAAGCGATTAGAAGGAAGGACGCCAGTGACCTGCAAAGTTGAAAAAGAATGA

Protein Analysis

782

Amino Acids

87.7

Weight (kDa)

6.19

Isoelectric Point (pI)

44.55

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
HATPase_c_3 PF13589 191 - 287 1.1e-17 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
HATPase_c PF02518 192 - 271 4.4e-07 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
Morc6_S5 PF17942 421 - 565 2.9e-60 Morc6 ribosomal protein S5 domain 2-like
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000426)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G14185 AT1G14190 AT1G14190
fragaria_vesca FvH4_4g31240
malus_domestica MD13G1071000.v1.1 MD13G1071100.v1.1 MD16G1071700.v1.1 MD16G1071800.v1.1
prunus_persica Prupe.1G275800_v2.0.a1
pyrus_communis pycom13g06360 pycom13g06370 pycom16g06200
rosa_chinensis RchiOBHm_Chr1g0339361 RchiOBHm_Chr1g0339551 RchiOBHm_Chr4g0439631 RchiOBHm_Chr4g0439641 RchiOBHm_Chr4g0439661 RchiOBHm_Chr4g0439681 RchiOBHm_Chr5g0043441 RchiOBHm_Chr5g0076991
rosa_laevigata RLG00000006247 RLG00000006249 RLG00000006250 RLG00000006251 RLG00000006252 RLG00000029228 RLG00000029236 RLG00000034187 RLG00000036640
rosa_multiflora Rmu_co8382505.1_g000001 Rmu_co8503591.1_g000001 Rmu_sc0000613.1_g000004 Rmu_sc0000729.1_g000011 Rmu_sc0002549.1_g000002 Rmu_sc0002549.1_g000008 Rmu_sc0004655.1_g000021 Rmu_sc0005220.1_g000001 Rmu_sc0007322.1_g000009 Rmu_sc0008285.1_g000002 Rmu_sc0009495.1_g000002 Rmu_ssc0000067.1_g000054
rosa_roxburghii Rroxscaffold_1G00005160 Rroxscaffold_1G00037450 Rroxscaffold_4G00313450 Rroxscaffold_4G00313520 Rroxscaffold_5G00380580 Rroxscaffold_5G00380590
rosa_rugosa Rorug01G0141000.1 Rorug01G0142300.1 Rorug01G0142400.1 Rorug04G0320400 Rorug04G0320500 Rorug04G0320500 Rorug04G0320800 Rorug04G0320900 Rorug05G0205800 Rorug05G0449900
rosa_samantha Rh1AG158500 Rh1AG159100 Rh1BG126000 Rh1CG108300 Rh1CG147800 Rh1CG148300 Rh1DG116900 Rh4AG371400 Rh4AG371500 Rh4AG371600 Rh4AG371700 Rh4BG383200 Rh4BG383300 Rh4BG383400 Rh4BG383700 Rh4CG397800 Rh4CG398000 Rh4CG398100 Rh4CG398400 Rh4DG378000 Rh4DG378100 Rh4DG378200 Rh5AG291600 Rh5AG454300 Rh5AG504700 Rh5BG298300 Rh5BG526400 Rh5CG327800 Rh5CG550200 Rh5DG307600 Rh5DG538500
rosa_wichuraiana Rw1G013210 Rw1G013570 Rw4G031660 Rw4G031680 Rw4G031690 Rw4G031710 Rw5G027060 Rw5G047170

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 2336
AccB1I GGYRCC 2 cut(s) 277, 307
AccBSI CCGCTC 2 cut(s) 283, 1636
AccII CGCG 1 cut(s) 1329
AccIII TCCGGA 1 cut(s) 268
AciI CCGC 9 cut(s) 9, 42, 257, 281, 302, 305, 985, 1329, 1636
AclI AACGTT 1 cut(s) 1503
AclWI GGATC 3 cut(s) 516, 1157, 1870
AcsI RAATTY 2 cut(s) 519, 1012
AcuI CTGAAG 2 cut(s) 1049, 1749
AcvI CACGTG 1 cut(s) 177
AcyI GRCGYC 1 cut(s) 2318
AfaI GTAC 4 cut(s) 805, 913, 1391, 1738
AfiI CCNNNNNNNGG 1 cut(s) 1123
AgeI ACCGGT 1 cut(s) 274
AgsI TTSAA 7 cut(s) 1178, 1431, 1501, 1607, 1652, 1978, 2339
AhlI ACTAGT 3 cut(s) 800, 1739, 2200
AluBI AGCT 9 cut(s) 446, 575, 586, 1595, 1613, 1839, 1985, 2115, 2284
AluI AGCT 9 cut(s) 446, 575, 586, 1595, 1613, 1839, 1985, 2115, 2284
Alw26I GTCTC 5 cut(s) 143, 715, 738, 805, 1041
AlwI GGATC 3 cut(s) 516, 1157, 1870
AlwNI CAGNNNCTG 1 cut(s) 1772
Ama87I CYCGRG 1 cut(s) 324
Aor13HI TCCGGA 1 cut(s) 268
ApeKI GCWGC 5 cut(s) 90, 586, 1439, 1553, 2284
ApoI RAATTY 2 cut(s) 519, 1012
AseI ATTAAT 1 cut(s) 855
AsiGI ACCGGT 1 cut(s) 274
Asp700I GAANNNNTTC 2 cut(s) 1059, 2053
AspA2I CCTAGG 1 cut(s) 527
AspLEI GCGC 1 cut(s) 1329
AspS9I GGNCC 1 cut(s) 410
AsuC2I CCSGG 1 cut(s) 29
AsuHPI GGTGA 6 cut(s) 307, 473, 515, 1396, 1779, 2308
AsuII TTCGAA 1 cut(s) 542
AvaI CYCGRG 1 cut(s) 324
AvaII GGWCC 1 cut(s) 410
AvrII CCTAGG 1 cut(s) 527
AxyI CCTNAGG 1 cut(s) 905
BanI GGYRCC 2 cut(s) 277, 307
BbrPI CACGTG 1 cut(s) 177
BbsI GAAGAC 1 cut(s) 1738
BbvCI CCTCAGC 1 cut(s) 1932
BbvI GCAGC 5 cut(s) 102, 573, 1426, 1540, 2271
BccI CCATC 6 cut(s) 79, 179, 656, 1312, 1559, 1886
BceAI ACGGC 2 cut(s) 295, 315
BcnI CCSGG 1 cut(s) 29
BcoDI GTCTC 5 cut(s) 143, 715, 738, 805, 1041
BcuI ACTAGT 3 cut(s) 800, 1739, 2200
BfmI CTRYAG 1 cut(s) 1554
BfuAI ACCTGC 1 cut(s) 2336
BglI GCCNNNNNGGC 2 cut(s) 218, 1537
BglII AGATCT 1 cut(s) 1057
BisI GCNGC 8 cut(s) 91, 257, 281, 303, 587, 1440, 1554, 2285
BlnI CCTAGG 1 cut(s) 527
BlsI GCNGC 8 cut(s) 92, 258, 282, 304, 588, 1441, 1555, 2286
BmcAI AGTACT 1 cut(s) 805
Bme1390I CCNGG 1 cut(s) 29
Bme18I GGWCC 1 cut(s) 410
BmeT110I CYCGRG 1 cut(s) 324
BmgT120I GGNCC 1 cut(s) 410
BmiI GGNNCC 4 cut(s) 273, 279, 309, 622
BmrFI CCNGG 1 cut(s) 29
BmsI GCATC 5 cut(s) 466, 972, 1289, 1459, 2251
BpiI GAAGAC 1 cut(s) 1738
BpmI CTGGAG 1 cut(s) 978
Bpu10I CCTNAGC 1 cut(s) 1932
Bpu14I TTCGAA 1 cut(s) 542
BpuEI CTTGAG 5 cut(s) 1679, 1825, 1939, 2159, 2309
BpuMI CCSGG 1 cut(s) 29
Bsa29I ATCGAT 1 cut(s) 2060
BsaAI YACGTR 1 cut(s) 177
BsaBI GATNNNNATC 4 cut(s) 83, 666, 1161, 2097
BsaHI GRCGYC 1 cut(s) 2318
BsaI GGTCTC 2 cut(s) 143, 1041
BsaJI CCNNGG 2 cut(s) 527, 1492
BsaWI WCCGGW 3 cut(s) 56, 268, 274
BsaXI ACNNNNNCTCC 4 cut(s) 810, 840, 1679, 1709
Bsc4I CCNNNNNNNGG 1 cut(s) 1123
Bse118I RCCGGY 2 cut(s) 274, 292
Bse1I ACTGG 4 cut(s) 413, 552, 919, 2321
Bse21I CCTNAGG 1 cut(s) 905
Bse3DI GCAATG 5 cut(s) 251, 324, 622, 793, 1910
Bse8I GATNNNNATC 4 cut(s) 83, 666, 1161, 2097
BseAI TCCGGA 1 cut(s) 268
BseCI ATCGAT 1 cut(s) 2060
BseDI CCNNGG 2 cut(s) 527, 1492
BseGI GGATG 5 cut(s) 610, 1132, 1204, 1474, 2266
BseJI GATNNNNATC 4 cut(s) 83, 666, 1161, 2097
BseLI CCNNNNNNNGG 1 cut(s) 1123
BseMI GCAATG 5 cut(s) 251, 324, 622, 793, 1910
BseMII CTCAG 4 cut(s) 896, 1309, 1946, 2257
BseNI ACTGG 4 cut(s) 413, 552, 919, 2321
BseRI GAGGAG 4 cut(s) 28, 1200, 1285, 2093
BseXI GCAGC 5 cut(s) 102, 573, 1426, 1540, 2271
BseYI CCCAGC 1 cut(s) 446
BsgI GTGCAG 1 cut(s) 1049
Bsh1236I CGCG 1 cut(s) 1329
Bsh1285I CGRYCG 1 cut(s) 81
BshNI GGYRCC 2 cut(s) 277, 307
BshTI ACCGGT 1 cut(s) 274
BshVI ATCGAT 1 cut(s) 2060
BsiEI CGRYCG 1 cut(s) 81
BsiHKCI CYCGRG 1 cut(s) 324
BsiSI CCGG 7 cut(s) 29, 57, 218, 269, 275, 293, 335
BslFI GGGAC 1 cut(s) 2016
BslI CCNNNNNNNGG 1 cut(s) 1123
BsmAI GTCTC 5 cut(s) 143, 715, 738, 805, 1041
BsmFI GGGAC 1 cut(s) 2016
BsmI GAATGC 7 cut(s) 538, 550, 1209, 1422, 1555, 1683, 1882
Bso31I GGTCTC 2 cut(s) 143, 1041
BsoBI CYCGRG 1 cut(s) 324
Bsp119I TTCGAA 1 cut(s) 542
Bsp13I TCCGGA 1 cut(s) 268
Bsp143I GATC 8 cut(s) 78, 162, 508, 1057, 1162, 1862, 1939, 2092
BspACI CCGC 9 cut(s) 9, 42, 257, 281, 302, 305, 985, 1329, 1636
BspCNI CTCAG 4 cut(s) 897, 1308, 1945, 2256
BspDI ATCGAT 1 cut(s) 2060
BspEI TCCGGA 1 cut(s) 268
BspFNI CGCG 1 cut(s) 1329
BspHI TCATGA 1 cut(s) 2101
BspLI GGNNCC 4 cut(s) 273, 279, 309, 622
BspMAI CTGCAG 1 cut(s) 1558
BspMI ACCTGC 1 cut(s) 2336
BspPI GGATC 3 cut(s) 516, 1157, 1870
BspQI GCTCTTC 1 cut(s) 1199
BspT104I TTCGAA 1 cut(s) 542
BspT107I GGYRCC 2 cut(s) 277, 307
BspTNI GGTCTC 2 cut(s) 143, 1041
BsrBI CCGCTC 2 cut(s) 283, 1636
BsrDI GCAATG 5 cut(s) 251, 324, 622, 793, 1910
BsrFI RCCGGY 2 cut(s) 274, 292
BsrI ACTGG 4 cut(s) 413, 552, 919, 2321
BssAI RCCGGY 2 cut(s) 274, 292
BssECI CCNNGG 2 cut(s) 527, 1492
BssMI GATC 8 cut(s) 78, 162, 508, 1057, 1162, 1862, 1939, 2092
BssNI GRCGYC 1 cut(s) 2318
BssT1I CCWWGG 2 cut(s) 527, 1492
Bst4CI ACNGT 2 cut(s) 726, 1901
Bst6I CTCTTC 2 cut(s) 1199, 2157
BstACI GRCGYC 1 cut(s) 2318
BstAPI GCANNNNNTGC 1 cut(s) 1916
BstBAI YACGTR 1 cut(s) 177
BstBI TTCGAA 1 cut(s) 542
BstC8I GCNNGC 7 cut(s) 431, 987, 1331, 1474, 1558, 1837, 1917
BstDEI CTNAG 4 cut(s) 905, 1295, 1932, 2243
BstENI CCTNNNNNAGG 1 cut(s) 1121
BstF5I GGATG 5 cut(s) 610, 1132, 1204, 1474, 2266
BstFNI CGCG 1 cut(s) 1329
BstHHI GCGC 1 cut(s) 1329
BstKTI GATC 8 cut(s) 81, 165, 511, 1060, 1165, 1865, 1942, 2095
BstMAI GTCTC 5 cut(s) 143, 715, 738, 805, 1041
BstMBI GATC 8 cut(s) 78, 162, 508, 1057, 1162, 1862, 1939, 2092
BstMCI CGRYCG 1 cut(s) 81
BstMWI GCNNNNNNNGC 7 cut(s) 96, 218, 289, 485, 572, 1537, 1916
BstNSI RCATGY 2 cut(s) 733, 1919
BstSCI CCNGG 1 cut(s) 27
BstSFI CTRYAG 1 cut(s) 1554
BstUI CGCG 1 cut(s) 1329
BstV1I GCAGC 5 cut(s) 102, 573, 1426, 1540, 2271
BstV2I GAAGAC 1 cut(s) 1738
BstX2I RGATCY 1 cut(s) 1057
BstXI CCANNNNNNTGG 2 cut(s) 1002, 1715
BstYI RGATCY 1 cut(s) 1057
Bsu15I ATCGAT 1 cut(s) 2060
Bsu36I CCTNAGG 1 cut(s) 905
BsuTUI ATCGAT 1 cut(s) 2060
BtgZI GCGATG 2 cut(s) 57, 1851
BtsCI GGATG 5 cut(s) 610, 1132, 1204, 1474, 2266
BtsI GCAGTG 2 cut(s) 1037, 1567
BtsIMutI CAGTG 4 cut(s) 731, 1037, 1567, 2328
BveI ACCTGC 1 cut(s) 2336
Cac8I GCNNGC 7 cut(s) 431, 987, 1331, 1474, 1558, 1837, 1917
CaiI CAGNNNCTG 1 cut(s) 1772
CciI TCATGA 1 cut(s) 2101
CfoI GCGC 1 cut(s) 1329
Cfr10I RCCGGY 2 cut(s) 274, 292
Cfr13I GGNCC 1 cut(s) 410
ClaI ATCGAT 1 cut(s) 2060
CseI GACGC 2 cut(s) 1935, 2326
Csp6I GTAC 4 cut(s) 804, 912, 1390, 1737
CspAI ACCGGT 1 cut(s) 274
CviQI GTAC 4 cut(s) 804, 912, 1390, 1737
DdeI CTNAG 4 cut(s) 905, 1295, 1932, 2243
DpnI GATC 8 cut(s) 80, 164, 510, 1059, 1164, 1864, 1941, 2094
DpnII GATC 8 cut(s) 78, 162, 508, 1057, 1162, 1862, 1939, 2092
Eam1104I CTCTTC 2 cut(s) 1199, 2157
EarI CTCTTC 2 cut(s) 1199, 2157
EciI GGCGGA 1 cut(s) 31
Eco130I CCWWGG 2 cut(s) 527, 1492
Eco31I GGTCTC 2 cut(s) 143, 1041
Eco32I GATATC 2 cut(s) 1339, 1489
Eco47I GGWCC 1 cut(s) 410
Eco57I CTGAAG 2 cut(s) 1049, 1749
Eco72I CACGTG 1 cut(s) 177
Eco81I CCTNAGG 1 cut(s) 905
Eco88I CYCGRG 1 cut(s) 324
EcoNI CCTNNNNNAGG 1 cut(s) 1121
EcoRI GAATTC 1 cut(s) 519
EcoRV GATATC 2 cut(s) 1339, 1489
EcoT14I CCWWGG 2 cut(s) 527, 1492
EcoT22I ATGCAT 1 cut(s) 1282
ErhI CCWWGG 2 cut(s) 527, 1492
FaqI GGGAC 1 cut(s) 2016
FauI CCCGC 2 cut(s) 978, 1322
Fnu4HI GCNGC 8 cut(s) 91, 257, 281, 303, 587, 1440, 1554, 2285
FokI GGATG 5 cut(s) 617, 1139, 1211, 1481, 2273
Fsp4HI GCNGC 8 cut(s) 91, 257, 281, 303, 587, 1440, 1554, 2285
GlaI GCGC 1 cut(s) 1328
GluI GCNGC 8 cut(s) 91, 257, 281, 303, 587, 1440, 1554, 2285
GsaI CCCAGC 1 cut(s) 450
GsuI CTGGAG 1 cut(s) 978
HapII CCGG 7 cut(s) 29, 57, 218, 269, 275, 293, 335
HgaI GACGC 2 cut(s) 1935, 2326
HhaI GCGC 1 cut(s) 1329
Hin1I GRCGYC 1 cut(s) 2318
Hin6I GCGC 1 cut(s) 1327
HinP1I GCGC 1 cut(s) 1327
HincII GTYRAC 1 cut(s) 1192
HindII GTYRAC 1 cut(s) 1192
HpaII CCGG 7 cut(s) 29, 57, 218, 269, 275, 293, 335
HphI GGTGA 6 cut(s) 307, 473, 515, 1396, 1779, 2308
Hpy166II GTNNAC 1 cut(s) 1192
Hpy188I TCNGA 7 cut(s) 133, 672, 1215, 1774, 1800, 1951, 2196
Hpy8I GTNNAC 1 cut(s) 1192
Hpy99I CGWCG 2 cut(s) 122, 143
HpyAV CCTTC 8 cut(s) 233, 1127, 1372, 1459, 2137, 2287, 2303, 2307
HpyCH4III ACNGT 2 cut(s) 726, 1901
HpyCH4IV ACGT 6 cut(s) 176, 196, 344, 1388, 1503, 1735
HpyF10VI GCNNNNNNNGC 7 cut(s) 96, 218, 289, 485, 572, 1537, 1916
HpyF3I CTNAG 4 cut(s) 905, 1295, 1932, 2243
HpySE526I ACGT 6 cut(s) 176, 196, 344, 1388, 1503, 1735
Hsp92I GRCGYC 1 cut(s) 2318
HspAI GCGC 1 cut(s) 1327
Kpn2I TCCGGA 1 cut(s) 268
Kzo9I GATC 8 cut(s) 78, 162, 508, 1057, 1162, 1862, 1939, 2092
LguI GCTCTTC 1 cut(s) 1199
LmnI GCTCC 4 cut(s) 572, 620, 818, 1729
Lsp1109I GCAGC 5 cut(s) 102, 573, 1426, 1540, 2271
LweI GCATC 5 cut(s) 466, 972, 1289, 1459, 2251
MaeII ACGT 6 cut(s) 176, 196, 344, 1388, 1503, 1735
MalI GATC 8 cut(s) 80, 164, 510, 1059, 1164, 1864, 1941, 2094
MbiI CCGCTC 2 cut(s) 283, 1636
MboI GATC 8 cut(s) 78, 162, 508, 1057, 1162, 1862, 1939, 2092
MfeI CAATTG 1 cut(s) 771
MflI RGATCY 1 cut(s) 1057
MlyI GAGTC 7 cut(s) 176, 332, 700, 1197, 1444, 1946, 2235
MmeI TCCRAC 3 cut(s) 950, 1569, 2148
Mph1103I ATGCAT 1 cut(s) 1282
MroI TCCGGA 1 cut(s) 268
MroXI GAANNNNTTC 2 cut(s) 1059, 2053
MseI TTAA 9 cut(s) 633, 795, 855, 1074, 1250, 1527, 1830, 1926, 2127
MslI CAYNNNNRTG 3 cut(s) 543, 1214, 1370
MspI CCGG 7 cut(s) 29, 57, 218, 269, 275, 293, 335
MspR9I CCNGG 1 cut(s) 29
MunI CAATTG 1 cut(s) 771
Mva1269I GAATGC 7 cut(s) 538, 550, 1209, 1422, 1555, 1683, 1882
MvnI CGCG 1 cut(s) 1329
MwoI GCNNNNNNNGC 7 cut(s) 96, 218, 289, 485, 572, 1537, 1916
NciI CCSGG 1 cut(s) 29
NdeII GATC 8 cut(s) 78, 162, 508, 1057, 1162, 1862, 1939, 2092
NlaIV GGNNCC 4 cut(s) 273, 279, 309, 622
NmeAIII GCCGAG 1 cut(s) 70
NmuCI GTSAC 9 cut(s) 295, 349, 461, 554, 1384, 1447, 1742, 2008, 2323
NsiI ATGCAT 1 cut(s) 1282
NspI RCATGY 2 cut(s) 733, 1919
NspV TTCGAA 1 cut(s) 542
PaeI GCATGC 1 cut(s) 1919
PagI TCATGA 1 cut(s) 2101
PciSI GCTCTTC 1 cut(s) 1199
PctI GAATGC 7 cut(s) 538, 550, 1209, 1422, 1555, 1683, 1882
PdmI GAANNNNTTC 2 cut(s) 1059, 2053
PfeI GAWTC 6 cut(s) 60, 122, 245, 1427, 1760, 2054
PfoI TCCNGGA 1 cut(s) 27
PinAI ACCGGT 1 cut(s) 274
PkrI GCNGC 8 cut(s) 92, 258, 282, 304, 588, 1441, 1555, 2286
Ple19I CGATCG 1 cut(s) 81
PleI GAGTC 7 cut(s) 175, 332, 700, 1196, 1444, 1946, 2235
PmaCI CACGTG 1 cut(s) 177
PmlI CACGTG 1 cut(s) 177
PpsI GAGTC 7 cut(s) 175, 332, 700, 1196, 1444, 1946, 2235
Ppu21I YACGTR 1 cut(s) 177
PshBI ATTAAT 1 cut(s) 855
Psp1406I AACGTT 1 cut(s) 1503
PspCI CACGTG 1 cut(s) 177
PspFI CCCAGC 1 cut(s) 446
PspN4I GGNNCC 4 cut(s) 273, 279, 309, 622
PspPI GGNCC 1 cut(s) 410
PstI CTGCAG 1 cut(s) 1558
PstNI CAGNNNCTG 1 cut(s) 1772
PsuI RGATCY 1 cut(s) 1057
PvuI CGATCG 1 cut(s) 81
RsaI GTAC 4 cut(s) 805, 913, 1391, 1738
RsaNI GTAC 4 cut(s) 804, 912, 1390, 1737
RseI CAYNNNNRTG 3 cut(s) 543, 1214, 1370
SapI GCTCTTC 1 cut(s) 1199
SaqAI TTAA 9 cut(s) 633, 795, 855, 1074, 1250, 1527, 1830, 1926, 2127
SatI GCNGC 8 cut(s) 91, 257, 281, 303, 587, 1440, 1554, 2285
Sau3AI GATC 8 cut(s) 78, 162, 508, 1057, 1162, 1862, 1939, 2092
Sau96I GGNCC 1 cut(s) 410
ScaI AGTACT 1 cut(s) 805
SchI GAGTC 7 cut(s) 176, 332, 700, 1197, 1444, 1946, 2235
ScrFI CCNGG 1 cut(s) 29
SfaNI GCATC 5 cut(s) 466, 972, 1289, 1459, 2251
SfcI CTRYAG 1 cut(s) 1554
SfuI TTCGAA 1 cut(s) 542
SinI GGWCC 1 cut(s) 410
SmiMI CAYNNNNRTG 3 cut(s) 543, 1214, 1370
SmlI CTYRAG 5 cut(s) 1658, 1840, 1954, 2138, 2288
SmoI CTYRAG 5 cut(s) 1658, 1840, 1954, 2138, 2288
SpeI ACTAGT 3 cut(s) 800, 1739, 2200
SphI GCATGC 1 cut(s) 1919
SsiI CCGC 9 cut(s) 9, 42, 257, 281, 302, 305, 985, 1329, 1636
SspI AATATT 1 cut(s) 637
StyD4I CCNGG 1 cut(s) 27
StyI CCWWGG 2 cut(s) 527, 1492
TaaI ACNGT 2 cut(s) 726, 1901
TaiI ACGT 6 cut(s) 179, 199, 347, 1391, 1506, 1738
TatI WGTACW 1 cut(s) 803
TauI GCSGC 3 cut(s) 259, 283, 305
TfiI GAWTC 6 cut(s) 60, 122, 245, 1427, 1760, 2054
Tru1I TTAA 9 cut(s) 633, 795, 855, 1074, 1250, 1527, 1830, 1926, 2127
Tru9I TTAA 9 cut(s) 633, 795, 855, 1074, 1250, 1527, 1830, 1926, 2127
TscAI CASTG 4 cut(s) 731, 1037, 1567, 2328
TseFI GTSAC 9 cut(s) 295, 349, 461, 554, 1384, 1447, 1742, 2008, 2323
TseI GCWGC 5 cut(s) 90, 586, 1439, 1553, 2284
Tsp45I GTSAC 9 cut(s) 295, 349, 461, 554, 1384, 1447, 1742, 2008, 2323
TspDTI ATGAA 5 cut(s) 222, 407, 1146, 2046, 2118
TspGWI ACGGA 5 cut(s) 106, 370, 487, 1114, 2273
TspRI CASTG 4 cut(s) 731, 1037, 1567, 2328
VpaK11BI GGWCC 1 cut(s) 410
VspI ATTAAT 1 cut(s) 855
XagI CCTNNNNNAGG 1 cut(s) 1121
XapI RAATTY 2 cut(s) 519, 1012
XbaI TCTAGA 1 cut(s) 1238
XceI RCATGY 2 cut(s) 733, 1919
XmaJI CCTAGG 1 cut(s) 527
XmnI GAANNNNTTC 2 cut(s) 1059, 2053
ZrmI AGTACT 1 cut(s) 805
Zsp2I ATGCAT 1 cut(s) 1282
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.