Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0004655.1

Orthogroup ID

OG0000426

Physical Location & Seq

Genomic Coordinates Forward (+)

77825 .. 80847

Gene Structure 3023 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0004655.1_g000021.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1899 bp

atgacttcaaaagtcgaagaagtagccggtaggtccttcgactacattgtggttggtggaggcactgcgggctgccccctagctgcaaccttgtctgagaaattctcagtgctgttggtggaacgaggtggctcgccttacggggaccccttcatcttagagttgaagtactacggatattcatatctcgtaactgatgaatatacatcagctgcacaaagctttgtctcgacagatggtgttcccaatttcagaggaagagtgctaggaggatcatccgctatcaatggtggattttacggcagagcaagcaaggattttgtcaaaaaggttggttgggataatgagggcgtaagggatgcttatgaatgggtggaatctagaatcatctctaaacctgatcatttgactccgtggtcgcatgctgttgcgttaagctttgttgaagctggaattctcccctataatggtttcagtttggagcatattcagggaacaaaaattggtgctactttgttcgataaccagggaagaagacacttaccagctgatcttctaccggcaggaaatccaagcaagatcacagttctcttgaatgcaaccgtagacaaagtcatctttcagagaactggtaccagagatgagaagatagctcaaggtataagattcatcaagagcgatggcagctcaaaccagacttatgaagcttacctcaaccagccagacaactcgggttcatggggtgacgtgatactatcagcaggagctttaggcagccctcagattttgttgttaagtggcattggccctcaagaacacctaaaaaacttcgaaatcccgctcgtactcaacttgaagggagtaggagaaggaatgcaagacaatgctgctactgcactcttcatcaactacaacccgcagaatccaacaccagaacattccaaagctgctggtatagcagatgacttcaaaatcataaccgaggcaacaattgcacctgctagcttgaatggaacaactgttagcttttttgttggcaaaattgccttcccagaatccgtaggaaagcttgaactcaacagcactgaccccagagcaaacccatcagtgacattcaactacctatcaagcgagaaagacttggcagaatgtgtgaagatgaccgagctgcttgagctagctttaaggtccaaatcaattgcttctttcgtgggttcgaatgaataccgaaacaagacgatgcctactaaagacgagctcgaggaactctgcaagacgactgtccgtaccgtctaccactaccatggtggttgcactgtggggtcggtggtcgacaagaattatagggttcatggtgttaaaggcttgagagtgattgatgggtcaaccttcctggaatcaccaggcacaaacccaatggccactgccttcggctccgggacctcaatatggctgagcggggcccacgagcttcagttcaacaactgcgagagagccaaagaggcccaaatccacaagatcgagaccttgatctgcatcccaacttccgacgcaagccaagtcgttgtttgggtcggatcagccagaccggaaacaagaccgctcgagttcatcaaccagaacttctccatttttgacatcggcatcattgccggcgtgcaagaagaggatcacaactcctacaatgacgacaagaaacatgtttttggttctagcaagaagaagaacggagctccgaacccaaacccggacttcgcagattcggactgcaacatgaaaagagcgccgaagaaaggaggccggaaacccgggctgggccgagacacaccgctcaaccacgtggaggcggagcggcagcggcgggagaagctcccctcgcaagggcagcgttggaagtga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0003674 GO:0003824 GO:0005488 GO:0005575 GO:0005576 GO:0006082 GO:0006629 GO:0006631 GO:0007154 GO:0007267 GO:0007275 GO:0008150 GO:0008152 GO:0009553 GO:0009987 GO:0010430 GO:0016829 GO:0016830 GO:0016832 GO:0019395 GO:0019752 GO:0023052 GO:0030258 GO:0032501 GO:0032502 GO:0032787 GO:0034440 GO:0036094 GO:0043167 GO:0043168 GO:0043436 GO:0044237 GO:0044238 GO:0044255 GO:0044281 GO:0046593 GO:0048037 GO:0048229 GO:0048856 GO:0050660 GO:0050662 GO:0055114 GO:0071704 GO:0097159 GO:1901265 GO:1901363

KEGG Pathways

Metabolic & Signaling

ko00260 ko01100 map00260 map01100

Pfam Domains

Protein Families

GMC_oxred_C GMC_oxred_N

Protein Analysis

632

Amino Acids

68.79

Weight (kDa)

6.31

Isoelectric Point (pI)

29.45

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000426)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G14185 AT1G14190 AT1G14190
fragaria_vesca	FvH4_4g31240
malus_domestica	MD13G1071000.v1.1 MD13G1071100.v1.1 MD16G1071700.v1.1 MD16G1071800.v1.1
prunus_persica	Prupe.1G275800_v2.0.a1
pyrus_communis	pycom13g06360 pycom13g06370 pycom16g06200
rosa_chinensis	RchiOBHm_Chr1g0339361 RchiOBHm_Chr1g0339551 RchiOBHm_Chr4g0439631 RchiOBHm_Chr4g0439641 RchiOBHm_Chr4g0439661 RchiOBHm_Chr4g0439681 RchiOBHm_Chr5g0043441 RchiOBHm_Chr5g0076991
rosa_laevigata	RLG00000006247 RLG00000006249 RLG00000006250 RLG00000006251 RLG00000006252 RLG00000029228 RLG00000029236 RLG00000034187 RLG00000036640
rosa_multiflora	Rmu_co8382505.1_g000001 Rmu_co8503591.1_g000001 Rmu_sc0000613.1_g000004 Rmu_sc0000729.1_g000011 Rmu_sc0002549.1_g000002 Rmu_sc0002549.1_g000008 Rmu_sc0004655.1_g000021 Rmu_sc0005220.1_g000001 Rmu_sc0007322.1_g000009 Rmu_sc0008285.1_g000002 Rmu_sc0009495.1_g000002 Rmu_ssc0000067.1_g000054
rosa_roxburghii	Rroxscaffold_1G00005160 Rroxscaffold_1G00037450 Rroxscaffold_4G00313450 Rroxscaffold_4G00313520 Rroxscaffold_5G00380580 Rroxscaffold_5G00380590
rosa_rugosa	Rorug01G0141000.1 Rorug01G0142300.1 Rorug01G0142400.1 Rorug04G0320400 Rorug04G0320500 Rorug04G0320500 Rorug04G0320800 Rorug04G0320900 Rorug05G0205800 Rorug05G0449900
rosa_samantha	Rh1AG158500 Rh1AG159100 Rh1BG126000 Rh1CG108300 Rh1CG147800 Rh1CG148300 Rh1DG116900 Rh4AG371400 Rh4AG371500 Rh4AG371600 Rh4AG371700 Rh4BG383200 Rh4BG383300 Rh4BG383400 Rh4BG383700 Rh4CG397800 Rh4CG398000 Rh4CG398100 Rh4CG398400 Rh4DG378000 Rh4DG378100 Rh4DG378200 Rh5AG291600 Rh5AG454300 Rh5AG504700 Rh5BG298300 Rh5BG526400 Rh5CG327800 Rh5CG550200 Rh5DG307600 Rh5DG538500
rosa_wichuraiana	Rw1G013210 Rw1G013570 Rw4G031660 Rw4G031680 Rw4G031690 Rw4G031710 Rw5G027060 Rw5G047170

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1006
AasI	GACNNNNNNGTC	1 cut(s)	415
Acc36I	ACCTGC	1 cut(s)	1006
Acc65I	GGTACC	1 cut(s)	632
AccB1I	GGYRCC	1 cut(s)	632
AccBSI	CCGCTC	5 cut(s)	841, 1458, 1603, 1831, 1852
AccI	GTMKAC	3 cut(s)	606, 1293, 1332
AclWI	GGATC	3 cut(s)	280, 1585, 1677
AcoI	YGGCCR	1 cut(s)	1419
AcsI	RAATTY	2 cut(s)	101, 453
AcuI	CTGAAG	1 cut(s)	1457
AcvI	CACGTG	1 cut(s)	1840
AfaI	GTAC	4 cut(s)	170, 634, 846, 1288
AfiI	CCNNNNNNNGG	8 cut(s)	467, 1449, 1747, 1793, 1814, 1843, 1880, 1881
AflIII	ACRYGT	1 cut(s)	1699
AjiI	CACGTC	1 cut(s)	748
AjnI	CCWGG	3 cut(s)	525, 1392, 1402
Alw21I	GWGCWC	2 cut(s)	1260, 1735
Alw26I	GTCTC	3 cut(s)	232, 1517, 1815
AlwI	GGATC	3 cut(s)	280, 1585, 1677
Ama87I	CYCGRG	4 cut(s)	730, 1259, 1604, 1808
AoxI	GGCC	6 cut(s)	805, 1419, 1461, 1503, 1798, 1816
ApaI	GGGCCC	1 cut(s)	1465
ApoI	RAATTY	2 cut(s)	101, 453
Asp718I	GGTACC	1 cut(s)	632
AspLEI	GCGC	1 cut(s)	1786
AspS9I	GGNCC	9 cut(s)	33, 145, 806, 1188, 1440, 1461, 1462, 1504, 1816
AsuC2I	CCSGG	4 cut(s)	1438, 1748, 1809, 1810
AsuHPI	GGTGA	2 cut(s)	755, 1392
AsuII	TTCGAA	2 cut(s)	831, 1217
AsuNHI	GCTAGC	2 cut(s)	1001, 1177
AvaI	CYCGRG	4 cut(s)	730, 1259, 1604, 1808
AvaII	GGWCC	4 cut(s)	33, 145, 1188, 1440
BaeGI	GKGCMC	1 cut(s)	1465
BalI	TGGCCA	1 cut(s)	1421
BanI	GGYRCC	1 cut(s)	632
BanII	GRGCYC	3 cut(s)	1260, 1465, 1735
BauI	CACGAG	1 cut(s)	1466
BbrPI	CACGTG	1 cut(s)	1840
BbsI	GAAGAC	1 cut(s)	541
Bbv12I	GWGCWC	2 cut(s)	1260, 1735
BbvI	GCAGC	9 cut(s)	59, 70, 199, 696, 786, 874, 934, 1155, 1867
BccI	CCATC	4 cut(s)	230, 674, 1111, 1373
BceAI	ACGGC	1 cut(s)	316
BciT130I	CCWGG	3 cut(s)	527, 1394, 1404
BclI	TGATCA	1 cut(s)	400
BcnI	CCSGG	4 cut(s)	1438, 1748, 1809, 1810
BcoDI	GTCTC	3 cut(s)	232, 1517, 1815
BfaI	CTAG	6 cut(s)	80, 266, 381, 1002, 1178, 1713
BfoI	RGCGCY	1 cut(s)	1787
BfuAI	ACCTGC	1 cut(s)	1006
BglI	GCCNNNNNGGC	1 cut(s)	1502
BlpI	GCTNAGC	1 cut(s)	1454
BmcAI	AGTACT	1 cut(s)	170
Bme1390I	CCNGG	7 cut(s)	527, 1394, 1404, 1438, 1748, 1809, 1810
Bme18I	GGWCC	4 cut(s)	33, 145, 1188, 1440
BmeT110I	CYCGRG	4 cut(s)	730, 1259, 1604, 1808
BmgBI	CACGTC	1 cut(s)	748
BmgT120I	GGNCC	9 cut(s)	33, 145, 806, 1188, 1440, 1461, 1462, 1504, 1816
BmiI	GGNNCC	7 cut(s)	146, 147, 634, 1435, 1441, 1462, 1463
BmrFI	CCNGG	7 cut(s)	527, 1394, 1404, 1438, 1748, 1809, 1810
BmsI	GCATC	4 cut(s)	349, 1230, 1545, 1653
BmtI	GCTAGC	2 cut(s)	1005, 1181
BoxI	GACNNNNGTC	1 cut(s)	1280
BpiI	GAAGAC	1 cut(s)	541
BplI	GAGNNNNNCTC	2 cut(s)	89, 121
Bpu1102I	GCTNAGC	1 cut(s)	1454
Bpu14I	TTCGAA	2 cut(s)	831, 1217
BpuEI	CTTGAG	4 cut(s)	639, 795, 1193, 1387
BpuMI	CCSGG	4 cut(s)	1438, 1748, 1809, 1810
BsaAI	YACGTR	1 cut(s)	1840
BsaBI	GATNNNNATC	1 cut(s)	1535
BsaI	GGTCTC	1 cut(s)	1517
BsaJI	CCNNGG	5 cut(s)	413, 526, 981, 1303, 1808
BsaWI	WCCGGW	1 cut(s)	1588
Bsc4I	CCNNNNNNNGG	8 cut(s)	467, 1449, 1747, 1793, 1814, 1843, 1880, 1881
Bse118I	RCCGGY	3 cut(s)	26, 559, 1652
Bse1I	ACTGG	1 cut(s)	634
Bse3DI	GCAATG	1 cut(s)	1647
Bse8I	GATNNNNATC	1 cut(s)	1535
BseBI	CCWGG	3 cut(s)	527, 1394, 1404
BseDI	CCNNGG	5 cut(s)	413, 526, 981, 1303, 1808
BseGI	GGATG	3 cut(s)	275, 364, 1536
BseJI	GATNNNNATC	1 cut(s)	1535
BseLI	CCNNNNNNNGG	8 cut(s)	467, 1449, 1747, 1793, 1814, 1843, 1880, 1881
BseMI	GCAATG	1 cut(s)	1647
BseMII	CTCAG	4 cut(s)	87, 120, 794, 1445
BseNI	ACTGG	1 cut(s)	634
BseSI	GKGCMC	1 cut(s)	1465
BseXI	GCAGC	9 cut(s)	59, 70, 199, 696, 786, 874, 934, 1155, 1867
BseYI	CCCAGC	1 cut(s)	1813
BsgI	GTGCAG	2 cut(s)	198, 879
BshFI	GGCC	6 cut(s)	807, 1421, 1463, 1505, 1800, 1818
BshNI	GGYRCC	1 cut(s)	632
BsiHKAI	GWGCWC	2 cut(s)	1260, 1735
BsiHKCI	CYCGRG	4 cut(s)	730, 1259, 1604, 1808
BsiSI	CCGG	8 cut(s)	27, 560, 1437, 1589, 1653, 1748, 1801, 1809
BslFI	GGGAC	2 cut(s)	158, 1453
BslI	CCNNNNNNNGG	8 cut(s)	467, 1449, 1747, 1793, 1814, 1843, 1880, 1881
BsmAI	GTCTC	3 cut(s)	232, 1517, 1815
BsmFI	GGGAC	2 cut(s)	158, 1453
BsmI	GAATGC	2 cut(s)	601, 879
BsnI	GGCC	6 cut(s)	807, 1421, 1463, 1505, 1800, 1818
Bso31I	GGTCTC	1 cut(s)	1517
BsoBI	CYCGRG	4 cut(s)	730, 1259, 1604, 1808
Bsp119I	TTCGAA	2 cut(s)	831, 1217
Bsp120I	GGGCCC	1 cut(s)	1461
Bsp1286I	GDGCHC	3 cut(s)	1260, 1465, 1735
Bsp143I	GATC	8 cut(s)	272, 400, 550, 579, 1518, 1530, 1577, 1669
Bsp1720I	GCTNAGC	1 cut(s)	1454
Bsp19I	CCATGG	1 cut(s)	1303
BspANI	GGCC	6 cut(s)	807, 1421, 1463, 1505, 1800, 1818
BspCNI	CTCAG	4 cut(s)	88, 119, 793, 1446
BspLI	GGNNCC	7 cut(s)	146, 147, 634, 1435, 1441, 1462, 1463
BspMI	ACCTGC	1 cut(s)	1006
BspOI	GCTAGC	2 cut(s)	1005, 1181
BspPI	GGATC	3 cut(s)	280, 1585, 1677
BspT104I	TTCGAA	2 cut(s)	831, 1217
BspT107I	GGYRCC	1 cut(s)	632
BspTNI	GGTCTC	1 cut(s)	1517
BsrBI	CCGCTC	5 cut(s)	841, 1458, 1603, 1831, 1852
BsrDI	GCAATG	1 cut(s)	1647
BsrFI	RCCGGY	3 cut(s)	26, 559, 1652
BsrI	ACTGG	1 cut(s)	634
BssAI	RCCGGY	3 cut(s)	26, 559, 1652
BssECI	CCNNGG	5 cut(s)	413, 526, 981, 1303, 1808
BssMI	GATC	8 cut(s)	272, 400, 550, 579, 1518, 1530, 1577, 1669
BssSI	CACGAG	1 cut(s)	1466
BssT1I	CCWWGG	1 cut(s)	1303
Bst2BI	CACGAG	1 cut(s)	1466
Bst2UI	CCWGG	3 cut(s)	527, 1394, 1404
Bst4CI	ACNGT	6 cut(s)	586, 604, 1021, 1282, 1291, 1318
Bst6I	CTCTTC	3 cut(s)	253, 905, 1659
BstAPI	GCANNNNNTGC	1 cut(s)	992
BstBAI	YACGTR	1 cut(s)	1840
BstBI	TTCGAA	2 cut(s)	831, 1217
BstC8I	GCNNGC	9 cut(s)	70, 134, 310, 423, 1003, 1179, 1555, 1654, 1658
BstDEI	CTNAG	5 cut(s)	96, 106, 157, 780, 1454
BstDSI	CCRYGG	2 cut(s)	413, 1303
BstF5I	GGATG	3 cut(s)	275, 364, 1536
BstH2I	RGCGCY	1 cut(s)	1787
BstHHI	GCGC	1 cut(s)	1786
BstKTI	GATC	8 cut(s)	275, 403, 553, 582, 1521, 1533, 1580, 1672
BstMAI	GTCTC	3 cut(s)	232, 1517, 1815
BstMBI	GATC	8 cut(s)	272, 400, 550, 579, 1518, 1530, 1577, 1669
BstNI	CCWGG	3 cut(s)	527, 1394, 1404
BstNSI	RCATGY	2 cut(s)	425, 1703
BstPAI	GACNNNNGTC	1 cut(s)	1280
BstSCI	CCNGG	7 cut(s)	525, 1392, 1402, 1436, 1746, 1807, 1808
BstSLI	GKGCMC	1 cut(s)	1465
BstV1I	GCAGC	9 cut(s)	59, 70, 199, 696, 786, 874, 934, 1155, 1867
BstV2I	GAAGAC	1 cut(s)	541
BstXI	CCANNNNNNTGG	1 cut(s)	1304
BsuRI	GGCC	6 cut(s)	807, 1421, 1463, 1505, 1800, 1818
BtgI	CCRYGG	2 cut(s)	413, 1303
BtgZI	GCGATG	1 cut(s)	693
BtrI	CACGTC	1 cut(s)	748
BtsCI	GGATG	3 cut(s)	275, 364, 1536
BtsI	GCAGTG	2 cut(s)	63, 1422
BtsIMutI	CAGTG	6 cut(s)	63, 114, 1083, 1113, 1314, 1422
BveI	ACCTGC	1 cut(s)	1006
Cac8I	GCNNGC	9 cut(s)	70, 134, 310, 423, 1003, 1179, 1555, 1654, 1658
CfoI	GCGC	1 cut(s)	1786
Cfr10I	RCCGGY	3 cut(s)	26, 559, 1652
Cfr13I	GGNCC	9 cut(s)	33, 145, 806, 1188, 1440, 1461, 1462, 1504, 1816
Cfr9I	CCCGGG	1 cut(s)	1808
CseI	GACGC	1 cut(s)	1559
Csp6I	GTAC	4 cut(s)	169, 633, 845, 1287
CviAII	CATG	6 cut(s)	422, 738, 1304, 1352, 1700, 1774
CviQI	GTAC	4 cut(s)	169, 633, 845, 1287
DdeI	CTNAG	5 cut(s)	96, 106, 157, 780, 1454
DpnI	GATC	8 cut(s)	274, 402, 552, 581, 1520, 1532, 1579, 1671
DpnII	GATC	8 cut(s)	272, 400, 550, 579, 1518, 1530, 1577, 1669
DrdI	GACNNNNNNGTC	1 cut(s)	415
DseDI	GACNNNNNNGTC	1 cut(s)	415
EaeI	YGGCCR	1 cut(s)	1419
Eam1104I	CTCTTC	3 cut(s)	253, 905, 1659
EarI	CTCTTC	3 cut(s)	253, 905, 1659
EciI	GGCGGA	1 cut(s)	1862
Ecl136II	GAGCTC	2 cut(s)	1258, 1733
Eco130I	CCWWGG	1 cut(s)	1303
Eco24I	GRGCYC	3 cut(s)	1260, 1465, 1735
Eco31I	GGTCTC	1 cut(s)	1517
Eco47I	GGWCC	4 cut(s)	33, 145, 1188, 1440
Eco53kI	GAGCTC	2 cut(s)	1258, 1733
Eco57I	CTGAAG	1 cut(s)	1457
Eco72I	CACGTG	1 cut(s)	1840
Eco88I	CYCGRG	4 cut(s)	730, 1259, 1604, 1808
EcoICRI	GAGCTC	2 cut(s)	1258, 1733
EcoO109I	RGGNCCY	4 cut(s)	33, 145, 1440, 1461
EcoRI	GAATTC	1 cut(s)	453
EcoRII	CCWGG	3 cut(s)	525, 1392, 1402
EcoT14I	CCWWGG	1 cut(s)	1303
EcoT38I	GRGCYC	3 cut(s)	1260, 1465, 1735
ErhI	CCWWGG	1 cut(s)	1303
FaeI	CATG	6 cut(s)	425, 741, 1307, 1355, 1703, 1777
FalI	AAGNNNNNCTT	2 cut(s)	346, 378
FaqI	GGGAC	2 cut(s)	158, 1453
FatI	CATG	6 cut(s)	421, 737, 1303, 1351, 1699, 1773
FauI	CCCGC	5 cut(s)	61, 846, 924, 1451, 1854
FbaI	TGATCA	1 cut(s)	400
FblI	GTMKAC	3 cut(s)	606, 1293, 1332
FokI	GGATG	3 cut(s)	262, 371, 1523
FriOI	GRGCYC	3 cut(s)	1260, 1465, 1735
FspBI	CTAG	6 cut(s)	80, 266, 381, 1002, 1178, 1713
GlaI	GCGC	1 cut(s)	1785
GsaI	CCCAGC	1 cut(s)	1817
HaeII	RGCGCY	1 cut(s)	1787
HaeIII	GGCC	6 cut(s)	807, 1421, 1463, 1505, 1800, 1818
HapII	CCGG	8 cut(s)	27, 560, 1437, 1589, 1653, 1748, 1801, 1809
HgaI	GACGC	1 cut(s)	1559
HhaI	GCGC	1 cut(s)	1786
Hin1II	CATG	6 cut(s)	425, 741, 1307, 1355, 1703, 1777
Hin6I	GCGC	1 cut(s)	1784
HinP1I	GCGC	1 cut(s)	1784
HincII	GTYRAC	2 cut(s)	1333, 1386
HindII	GTYRAC	2 cut(s)	1333, 1386
HindIII	AAGCTT	4 cut(s)	220, 436, 705, 1067
HinfI	GANTC	8 cut(s)	377, 384, 409, 666, 922, 1055, 1397, 1760
HpaII	CCGG	8 cut(s)	27, 560, 1437, 1589, 1653, 1748, 1801, 1809
HphI	GGTGA	2 cut(s)	755, 1392
Hpy166II	GTNNAC	4 cut(s)	607, 1294, 1333, 1386
Hpy188I	TCNGA	8 cut(s)	97, 254, 624, 783, 1549, 1577, 1737, 1765
Hpy188III	TCNNGA	6 cut(s)	229, 381, 592, 673, 812, 1522
Hpy8I	GTNNAC	4 cut(s)	607, 1294, 1333, 1386
Hpy99I	CGWCG	1 cut(s)	1553
HpyAV	CCTTC	7 cut(s)	46, 160, 850, 863, 1057, 1399, 1438
HpyCH4III	ACNGT	6 cut(s)	586, 604, 1021, 1282, 1291, 1318
HpyCH4IV	ACGT	2 cut(s)	747, 1839
HpyF3I	CTNAG	5 cut(s)	96, 106, 157, 780, 1454
HpySE526I	ACGT	2 cut(s)	747, 1839
Hsp92II	CATG	6 cut(s)	425, 741, 1307, 1355, 1703, 1777
HspAI	GCGC	1 cut(s)	1784
KflI	GGGWCCC	1 cut(s)	145
KpnI	GGTACC	1 cut(s)	636
KroI	GCCGGC	1 cut(s)	1652
KroNI	GCCGGC	1 cut(s)	1654
Ksp22I	TGATCA	1 cut(s)	400
Kzo9I	GATC	8 cut(s)	272, 400, 550, 579, 1518, 1530, 1577, 1669
LmnI	GCTCC	7 cut(s)	481, 764, 1439, 1730, 1738, 1849, 1875
Lsp1109I	GCAGC	9 cut(s)	59, 70, 199, 696, 786, 874, 934, 1155, 1867
LweI	GCATC	4 cut(s)	349, 1230, 1545, 1653
MaeI	CTAG	6 cut(s)	80, 266, 381, 1002, 1178, 1713
MaeII	ACGT	2 cut(s)	747, 1839
MaeIII	GTNAC	3 cut(s)	190, 743, 1108
MalI	GATC	8 cut(s)	274, 402, 552, 581, 1520, 1532, 1579, 1671
MbiI	CCGCTC	5 cut(s)	841, 1458, 1603, 1831, 1852
MboI	GATC	8 cut(s)	272, 400, 550, 579, 1518, 1530, 1577, 1669
MfeI	CAATTG	2 cut(s)	990, 1197
MhlI	GDGCHC	3 cut(s)	1260, 1465, 1735
MlsI	TGGCCA	1 cut(s)	1421
MluCI	AATT	8 cut(s)	101, 247, 453, 501, 990, 1041, 1197, 1339
MluNI	TGGCCA	1 cut(s)	1421
MlyI	GAGTC	1 cut(s)	403
MmeI	TCCRAC	4 cut(s)	950, 1555, 1572, 1871
Mox20I	TGGCCA	1 cut(s)	1421
MroNI	GCCGGC	1 cut(s)	1652
MscI	TGGCCA	1 cut(s)	1421
MseI	TTAA	4 cut(s)	434, 794, 1184, 1359
MslI	CAYNNNNRTG	1 cut(s)	1302
Msp20I	TGGCCA	1 cut(s)	1421
MspA1I	CMGCKG	3 cut(s)	212, 548, 1858
MspI	CCGG	8 cut(s)	27, 560, 1437, 1589, 1653, 1748, 1801, 1809
MspR9I	CCNGG	7 cut(s)	527, 1394, 1404, 1438, 1748, 1809, 1810
MunI	CAATTG	2 cut(s)	990, 1197
Mva1269I	GAATGC	2 cut(s)	601, 879
MvaI	CCWGG	3 cut(s)	527, 1394, 1404
NaeI	GCCGGC	1 cut(s)	1654
NciI	CCSGG	4 cut(s)	1438, 1748, 1809, 1810
NcoI	CCATGG	1 cut(s)	1303
NdeII	GATC	8 cut(s)	272, 400, 550, 579, 1518, 1530, 1577, 1669
NgoMIV	GCCGGC	1 cut(s)	1652
NheI	GCTAGC	2 cut(s)	1001, 1177
NlaIII	CATG	6 cut(s)	425, 741, 1307, 1355, 1703, 1777
NlaIV	GGNNCC	7 cut(s)	146, 147, 634, 1435, 1441, 1462, 1463
NmeAIII	GCCGAG	1 cut(s)	1844
NmuCI	GTSAC	2 cut(s)	743, 1108
NspI	RCATGY	2 cut(s)	425, 1703
NspV	TTCGAA	2 cut(s)	831, 1217
PaeI	GCATGC	1 cut(s)	425
PaeR7I	CTCGAG	2 cut(s)	1259, 1604
PaqCI	CACCTGC	1 cut(s)	1006
PciI	ACATGT	1 cut(s)	1699
PctI	GAATGC	2 cut(s)	601, 879
PdiI	GCCGGC	1 cut(s)	1654
PfeI	GAWTC	7 cut(s)	377, 384, 666, 922, 1055, 1397, 1760
PflFI	GACNNNGTC	1 cut(s)	611
PfoI	TCCNGGA	2 cut(s)	1392, 1436
PleI	GAGTC	1 cut(s)	403
PmaCI	CACGTG	1 cut(s)	1840
PmlI	CACGTG	1 cut(s)	1840
PpsI	GAGTC	1 cut(s)	403
Ppu21I	YACGTR	1 cut(s)	1840
PpuMI	RGGWCCY	3 cut(s)	33, 145, 1440
PscI	ACATGT	1 cut(s)	1699
PshAI	GACNNNNGTC	1 cut(s)	1280
Psp124BI	GAGCTC	2 cut(s)	1260, 1735
Psp5II	RGGWCCY	3 cut(s)	33, 145, 1440
Psp6I	CCWGG	3 cut(s)	525, 1392, 1402
PspCI	CACGTG	1 cut(s)	1840
PspFI	CCCAGC	1 cut(s)	1813
PspGI	CCWGG	3 cut(s)	525, 1392, 1402
PspN4I	GGNNCC	7 cut(s)	146, 147, 634, 1435, 1441, 1462, 1463
PspOMI	GGGCCC	1 cut(s)	1461
PspPI	GGNCC	9 cut(s)	33, 145, 806, 1188, 1440, 1461, 1462, 1504, 1816
PspPPI	RGGWCCY	3 cut(s)	33, 145, 1440
PspXI	VCTCGAGB	2 cut(s)	1259, 1604
PsyI	GACNNNGTC	1 cut(s)	611
PvuII	CAGCTG	2 cut(s)	212, 548
RsaI	GTAC	4 cut(s)	170, 634, 846, 1288
RsaNI	GTAC	4 cut(s)	169, 633, 845, 1287
RseI	CAYNNNNRTG	1 cut(s)	1302
SacI	GAGCTC	2 cut(s)	1260, 1735
SalI	GTCGAC	1 cut(s)	1331
SaqAI	TTAA	4 cut(s)	434, 794, 1184, 1359
Sau3AI	GATC	8 cut(s)	272, 400, 550, 579, 1518, 1530, 1577, 1669
Sau96I	GGNCC	9 cut(s)	33, 145, 806, 1188, 1440, 1461, 1462, 1504, 1816
ScaI	AGTACT	1 cut(s)	170
SchI	GAGTC	1 cut(s)	403
ScrFI	CCNGG	7 cut(s)	527, 1394, 1404, 1438, 1748, 1809, 1810
SduI	GDGCHC	3 cut(s)	1260, 1465, 1735
SfaNI	GCATC	4 cut(s)	349, 1230, 1545, 1653
Sfr274I	CTCGAG	2 cut(s)	1259, 1604
SfuI	TTCGAA	2 cut(s)	831, 1217
SinI	GGWCC	4 cut(s)	33, 145, 1188, 1440
SlaI	CTCGAG	2 cut(s)	1259, 1604
SmaI	CCCGGG	1 cut(s)	1810
SmiMI	CAYNNNNRTG	1 cut(s)	1302
SmlI	CTYRAG	6 cut(s)	654, 810, 1172, 1259, 1366, 1604
SmoI	CTYRAG	6 cut(s)	654, 810, 1172, 1259, 1366, 1604
SphI	GCATGC	1 cut(s)	425
Sse9I	AATT	8 cut(s)	101, 247, 453, 501, 990, 1041, 1197, 1339
SspMI	CTAG	6 cut(s)	80, 266, 381, 1002, 1178, 1713
SstI	GAGCTC	2 cut(s)	1260, 1735
StyD4I	CCNGG	7 cut(s)	525, 1392, 1402, 1436, 1746, 1807, 1808
StyI	CCWWGG	1 cut(s)	1303
TaaI	ACNGT	6 cut(s)	586, 604, 1021, 1282, 1291, 1318
TaiI	ACGT	2 cut(s)	750, 1842
TaqII	GACCGA	1 cut(s)	1178
TasI	AATT	8 cut(s)	101, 247, 453, 501, 990, 1041, 1197, 1339
TatI	WGTACW	1 cut(s)	168
TauI	GCSGC	2 cut(s)	1855, 1861
TfiI	GAWTC	7 cut(s)	377, 384, 666, 922, 1055, 1397, 1760
Tru1I	TTAA	4 cut(s)	434, 794, 1184, 1359
Tru9I	TTAA	4 cut(s)	434, 794, 1184, 1359
TscAI	CASTG	6 cut(s)	70, 114, 1090, 1113, 1321, 1429
TseFI	GTSAC	2 cut(s)	743, 1108
Tsp45I	GTSAC	2 cut(s)	743, 1108
TspGWI	ACGGA	5 cut(s)	189, 402, 1048, 1274, 1743
TspMI	CCCGGG	1 cut(s)	1808
TspRI	CASTG	6 cut(s)	70, 114, 1090, 1113, 1321, 1429
Tth111I	GACNNNGTC	1 cut(s)	611
VpaK11BI	GGWCC	4 cut(s)	33, 145, 1188, 1440
XapI	RAATTY	2 cut(s)	101, 453
XbaI	TCTAGA	1 cut(s)	380
XceI	RCATGY	2 cut(s)	425, 1703
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1304
XhoI	CTCGAG	2 cut(s)	1259, 1604
XmaI	CCCGGG	1 cut(s)	1808
XmiI	GTMKAC	3 cut(s)	606, 1293, 1332
XspI	CTAG	6 cut(s)	80, 266, 381, 1002, 1178, 1713
ZrmI	AGTACT	1 cut(s)	170

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.