Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr7

Orthogroup ID

OG0000426

Physical Location & Seq

Genomic Coordinates Forward (+)

82833466 .. 82835133

Gene Structure 1668 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000036640

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1581 bp

ATGGGGTTTTCATTGCATCTGTTGCTGCTATTTGTTCACTTGGCTATATGTTCTTCGAAGCAAACATTCCCCTATATGACTTCAAATGTCGAAGAAGTAGCCGGTCGGTCCTTCGACTACATTGTGGTTGGCGGAGGCACTGCAGGCTGCCCCCTAGCTGCAACCTTGTCTGAGAAATTCTCAGTGCTGTTGGTGGAACGAGGTGGCTCACCTTACGGGGACCCCTTCATCTTAGAGTTGAAGTACTACGGATACCCATATCTCGTAACTGATGAATATACATCAGCTGCACAAAGCTTTGTCTCGACAGATGGTGTTCCCAATTTCAGAGGAAGAGTGCTAGGAGGATCATCTGCTATCAATGGTGGGTATTACGGCAGAGCAAGTAAGGATTTTATCAAAAAGGTTGGTTGGGATAATGAGGGAGTAAGGGATGCTTATGAATGGGTGGAATCTAGAATCATCTCTAAACCTGATCATTTGACTCCGTGGTCGCATGCTGTTGCGTTAAGTTTTGTTGAAGCTGGAATTCTCCCCTATAATGGTTTCAGTTTGGAGCATATTCAGGGAACAAAAATTGGAGCTACTTTGTTCGATAACCAGGGAAGAAGACACCTACCAGCTGATCTTCTACCGGCAGGAAATCCAAGCAAGATCACAGTTCTCTTGAATGCAACCGTAGACAAAGTTATCTTTCAGAGAAATGGTACCAGAGATGAGAAGATAGCTCAAGGTATAAGATTCATCAAGAGCGATGGCAGCTCAAACCAGACTTACGAAGCTTACCTCAACCAGCCAGACAACTCGGGTTCATGGGGTGATGTGATACTATCAGCAGGAGCTTTAGGCAGCCCTCAGATTTTGCTGTTAAGTGGCATTGGCCCTCAAGAACACCTAAAAAACTTCCAAATCCCGCTCGTACTCAACTTGAAGGGAGTAGGAGAAGGAATGAAAGACAATGCTGCTACTGCACTCTTCATCAACTACAACCCGCAGAATCCAACACCAGAACATTCCAAAGCTGCTGGTATAGCAGATGACTTCAAAATCATAACCGAGGCAACAATTGCACCTGCTAGCTTGAATGGAACAACTGTTAGCTTTTTTGTTGGCAAAATTGCCTTCCCAGACTCAGTAGGAAAGCTTGAACTCAACAGCACTGACCCCAGAGCAAACCCATCAGTGACATTCAACTACCTATCAAGCGAGAAAGACTTGGCAGAATGTGTGAAGATGACCGAGCTGCTTGAGCTAGCTTTAAGGTCCAAATCAATTGCTTCTTTCGTGGGTTCGAATGAATACCGAAACAAAACGATGCCTACTAAAGACGAGCTCCAGGAACTCTGCAAGACGACTGTCGGTACCGTCTACCACTACCATGGTGGTTGCACTGTGGGGTCGGTGGTCGACAAGAATTATAGGGTTCATGGTGTTAAAGGCTTGAGAGTGATTGATGGGTCAACCTTCCTGGAATCACCAGGCACAAACCCAATGGCCACTGTGCTGATGCTTGGAAGATACCAAGGGCTCAAAATTCTTCAAGAAAGAAAAGATGCTTCTTTTATCAATCCCAGAACCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0003674 GO:0003824 GO:0005488 GO:0005575 GO:0005576 GO:0006082 GO:0006629 GO:0006631 GO:0007154 GO:0007267 GO:0007275 GO:0008150 GO:0008152 GO:0009553 GO:0009987 GO:0010430 GO:0016829 GO:0016830 GO:0016832 GO:0019395 GO:0019752 GO:0023052 GO:0030258 GO:0032501 GO:0032502 GO:0032787 GO:0034440 GO:0036094 GO:0043167 GO:0043168 GO:0043436 GO:0044237 GO:0044238 GO:0044255 GO:0044281 GO:0046593 GO:0048037 GO:0048229 GO:0048856 GO:0050660 GO:0050662 GO:0055114 GO:0071704 GO:0097159 GO:1901265 GO:1901363

KEGG Pathways

Metabolic & Signaling

ko00260 ko01100 map00260 map01100

Pfam Domains

Protein Families

GMC_oxred_C GMC_oxred_N

Protein Analysis

527

Amino Acids

57.09

Weight (kDa)

6.43

Isoelectric Point (pI)

27.21

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GMC_oxred_N	PF00732	38 - 318	4.2e-15	GMC oxidoreductase
GMC_oxred_C	PF05199	376 - 505	1.3e-29	GMC oxidoreductase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000426)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G14185 AT1G14190 AT1G14190
fragaria_vesca	FvH4_4g31240
malus_domestica	MD13G1071000.v1.1 MD13G1071100.v1.1 MD16G1071700.v1.1 MD16G1071800.v1.1
prunus_persica	Prupe.1G275800_v2.0.a1
pyrus_communis	pycom13g06360 pycom13g06370 pycom16g06200
rosa_chinensis	RchiOBHm_Chr1g0339361 RchiOBHm_Chr1g0339551 RchiOBHm_Chr4g0439631 RchiOBHm_Chr4g0439641 RchiOBHm_Chr4g0439661 RchiOBHm_Chr4g0439681 RchiOBHm_Chr5g0043441 RchiOBHm_Chr5g0076991
rosa_laevigata	RLG00000006247 RLG00000006249 RLG00000006250 RLG00000006251 RLG00000006252 RLG00000029228 RLG00000029236 RLG00000034187 RLG00000036640
rosa_multiflora	Rmu_co8382505.1_g000001 Rmu_co8503591.1_g000001 Rmu_sc0000613.1_g000004 Rmu_sc0000729.1_g000011 Rmu_sc0002549.1_g000002 Rmu_sc0002549.1_g000008 Rmu_sc0004655.1_g000021 Rmu_sc0005220.1_g000001 Rmu_sc0007322.1_g000009 Rmu_sc0008285.1_g000002 Rmu_sc0009495.1_g000002 Rmu_ssc0000067.1_g000054
rosa_roxburghii	Rroxscaffold_1G00005160 Rroxscaffold_1G00037450 Rroxscaffold_4G00313450 Rroxscaffold_4G00313520 Rroxscaffold_5G00380580 Rroxscaffold_5G00380590
rosa_rugosa	Rorug01G0141000.1 Rorug01G0142300.1 Rorug01G0142400.1 Rorug04G0320400 Rorug04G0320500 Rorug04G0320500 Rorug04G0320800 Rorug04G0320900 Rorug05G0205800 Rorug05G0449900
rosa_samantha	Rh1AG158500 Rh1AG159100 Rh1BG126000 Rh1CG108300 Rh1CG147800 Rh1CG148300 Rh1DG116900 Rh4AG371400 Rh4AG371500 Rh4AG371600 Rh4AG371700 Rh4BG383200 Rh4BG383300 Rh4BG383400 Rh4BG383700 Rh4CG397800 Rh4CG398000 Rh4CG398100 Rh4CG398400 Rh4DG378000 Rh4DG378100 Rh4DG378200 Rh5AG291600 Rh5AG454300 Rh5AG504700 Rh5BG298300 Rh5BG526400 Rh5CG327800 Rh5CG550200 Rh5DG307600 Rh5DG538500
rosa_wichuraiana	Rw1G013210 Rw1G013570 Rw4G031660 Rw4G031680 Rw4G031690 Rw4G031710 Rw5G027060 Rw5G047170

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1081
AasI	GACNNNNNNGTC	1 cut(s)	490
Acc36I	ACCTGC	1 cut(s)	1081
Acc65I	GGTACC	2 cut(s)	707, 1361
AccB1I	GGYRCC	2 cut(s)	707, 1361
AccBSI	CCGCTC	1 cut(s)	916
AccI	GTMKAC	3 cut(s)	681, 1368, 1407
AciI	CCGC	3 cut(s)	132, 914, 992
AclWI	GGATC	1 cut(s)	355
AcoI	YGGCCR	1 cut(s)	1494
AcsI	RAATTY	3 cut(s)	176, 528, 1533
AfaI	GTAC	4 cut(s)	245, 709, 921, 1363
AfiI	CCNNNNNNNGG	1 cut(s)	542
AjnI	CCWGG	4 cut(s)	600, 1335, 1467, 1477
Alw21I	GWGCWC	1 cut(s)	1335
Alw26I	GTCTC	1 cut(s)	307
AlwI	GGATC	1 cut(s)	355
AlwNI	CAGNNNCTG	1 cut(s)	1578
Ama87I	CYCGRG	1 cut(s)	805
AoxI	GGCC	2 cut(s)	880, 1494
ApeKI	GCWGC	9 cut(s)	25, 147, 158, 287, 759, 849, 962, 1022, 1243
ApoI	RAATTY	3 cut(s)	176, 528, 1533
Asp718I	GGTACC	2 cut(s)	707, 1361
AspS9I	GGNCC	4 cut(s)	108, 220, 881, 1263
AsuHPI	GGTGA	3 cut(s)	201, 830, 1467
AsuII	TTCGAA	2 cut(s)	56, 1292
AsuNHI	GCTAGC	2 cut(s)	1076, 1252
AvaI	CYCGRG	1 cut(s)	805
AvaII	GGWCC	3 cut(s)	108, 220, 1263
BalI	TGGCCA	1 cut(s)	1496
BanI	GGYRCC	2 cut(s)	707, 1361
BanII	GRGCYC	2 cut(s)	1335, 1530
BbsI	GAAGAC	1 cut(s)	616
Bbv12I	GWGCWC	1 cut(s)	1335
BbvI	GCAGC	9 cut(s)	12, 134, 145, 274, 771, 861, 949, 1009, 1230
BccI	CCATC	4 cut(s)	305, 749, 1186, 1448
BceAI	ACGGC	1 cut(s)	391
BciT130I	CCWGG	4 cut(s)	602, 1337, 1469, 1479
BciVI	GTATCC	1 cut(s)	245
BclI	TGATCA	1 cut(s)	475
BcoDI	GTCTC	1 cut(s)	307
BfaI	CTAG	5 cut(s)	155, 341, 456, 1077, 1253
BfmI	CTRYAG	1 cut(s)	141
BfuAI	ACCTGC	1 cut(s)	1081
BfuI	GTATCC	1 cut(s)	245
BisI	GCNGC	9 cut(s)	26, 148, 159, 288, 760, 850, 963, 1023, 1244
BlsI	GCNGC	9 cut(s)	27, 149, 160, 289, 761, 851, 964, 1024, 1245
BmcAI	AGTACT	1 cut(s)	245
Bme1390I	CCNGG	4 cut(s)	602, 1337, 1469, 1479
Bme18I	GGWCC	3 cut(s)	108, 220, 1263
BmeT110I	CYCGRG	1 cut(s)	805
BmgT120I	GGNCC	4 cut(s)	108, 220, 881, 1263
BmiI	GGNNCC	4 cut(s)	221, 222, 709, 1363
BmrFI	CCNGG	4 cut(s)	602, 1337, 1469, 1479
BmsI	GCATC	5 cut(s)	25, 424, 1305, 1497, 1543
BmtI	GCTAGC	2 cut(s)	1080, 1256
BoxI	GACNNNNGTC	1 cut(s)	1355
BpiI	GAAGAC	1 cut(s)	616
BplI	GAGNNNNNCTC	2 cut(s)	164, 196
BpmI	CTGGAG	1 cut(s)	1319
Bpu14I	TTCGAA	2 cut(s)	56, 1292
BpuEI	CTTGAG	4 cut(s)	714, 870, 1268, 1462
BsaJI	CCNNGG	5 cut(s)	488, 601, 1056, 1378, 1522
Bsc4I	CCNNNNNNNGG	1 cut(s)	542
Bse118I	RCCGGY	2 cut(s)	101, 634
Bse3DI	GCAATG	1 cut(s)	11
BseBI	CCWGG	4 cut(s)	602, 1337, 1469, 1479
BseDI	CCNNGG	5 cut(s)	488, 601, 1056, 1378, 1522
BseGI	GGATG	1 cut(s)	439
BseLI	CCNNNNNNNGG	1 cut(s)	542
BseMI	GCAATG	1 cut(s)	11
BseMII	CTCAG	4 cut(s)	162, 195, 869, 1146
BseXI	GCAGC	9 cut(s)	12, 134, 145, 274, 771, 861, 949, 1009, 1230
BsgI	GTGCAG	2 cut(s)	273, 954
Bsh1285I	CGRYCG	1 cut(s)	106
BshFI	GGCC	2 cut(s)	882, 1496
BshNI	GGYRCC	2 cut(s)	707, 1361
BsiEI	CGRYCG	1 cut(s)	106
BsiHKAI	GWGCWC	1 cut(s)	1335
BsiHKCI	CYCGRG	1 cut(s)	805
BsiSI	CCGG	2 cut(s)	102, 635
BslFI	GGGAC	1 cut(s)	233
BslI	CCNNNNNNNGG	1 cut(s)	542
BsmAI	GTCTC	1 cut(s)	307
BsmFI	GGGAC	1 cut(s)	233
BsmI	GAATGC	1 cut(s)	676
BsnI	GGCC	2 cut(s)	882, 1496
BsoBI	CYCGRG	1 cut(s)	805
Bsp119I	TTCGAA	2 cut(s)	56, 1292
Bsp1286I	GDGCHC	2 cut(s)	1335, 1530
Bsp143I	GATC	4 cut(s)	347, 475, 625, 654
Bsp19I	CCATGG	1 cut(s)	1378
BspACI	CCGC	3 cut(s)	132, 914, 992
BspANI	GGCC	2 cut(s)	882, 1496
BspCNI	CTCAG	4 cut(s)	163, 194, 868, 1145
BspLI	GGNNCC	4 cut(s)	221, 222, 709, 1363
BspMAI	CTGCAG	1 cut(s)	145
BspMI	ACCTGC	1 cut(s)	1081
BspOI	GCTAGC	2 cut(s)	1080, 1256
BspPI	GGATC	1 cut(s)	355
BspT104I	TTCGAA	2 cut(s)	56, 1292
BspT107I	GGYRCC	2 cut(s)	707, 1361
BsrBI	CCGCTC	1 cut(s)	916
BsrDI	GCAATG	1 cut(s)	11
BsrFI	RCCGGY	2 cut(s)	101, 634
BssAI	RCCGGY	2 cut(s)	101, 634
BssECI	CCNNGG	5 cut(s)	488, 601, 1056, 1378, 1522
BssMI	GATC	4 cut(s)	347, 475, 625, 654
BssT1I	CCWWGG	2 cut(s)	1378, 1522
Bst2UI	CCWGG	4 cut(s)	602, 1337, 1469, 1479
Bst4CI	ACNGT	7 cut(s)	661, 679, 1096, 1357, 1366, 1393, 1501
Bst6I	CTCTTC	2 cut(s)	328, 980
BstAPI	GCANNNNNTGC	2 cut(s)	22, 1067
BstBI	TTCGAA	2 cut(s)	56, 1292
BstC8I	GCNNGC	4 cut(s)	145, 498, 1078, 1254
BstDEI	CTNAG	5 cut(s)	171, 181, 232, 855, 1132
BstDSI	CCRYGG	2 cut(s)	488, 1378
BstF5I	GGATG	1 cut(s)	439
BstKTI	GATC	4 cut(s)	350, 478, 628, 657
BstMAI	GTCTC	1 cut(s)	307
BstMBI	GATC	4 cut(s)	347, 475, 625, 654
BstMCI	CGRYCG	1 cut(s)	106
BstMWI	GCNNNNNNNGC	7 cut(s)	22, 144, 759, 968, 1031, 1067, 1249
BstNI	CCWGG	4 cut(s)	602, 1337, 1469, 1479
BstNSI	RCATGY	1 cut(s)	500
BstPAI	GACNNNNGTC	1 cut(s)	1355
BstSCI	CCNGG	4 cut(s)	600, 1335, 1467, 1477
BstSFI	CTRYAG	1 cut(s)	141
BstV1I	GCAGC	9 cut(s)	12, 134, 145, 274, 771, 861, 949, 1009, 1230
BstV2I	GAAGAC	1 cut(s)	616
BstXI	CCANNNNNNTGG	1 cut(s)	1379
BsuI	GTATCC	1 cut(s)	245
BsuRI	GGCC	2 cut(s)	882, 1496
BtgI	CCRYGG	2 cut(s)	488, 1378
BtgZI	GCGATG	1 cut(s)	768
BtsCI	GGATG	1 cut(s)	439
BtsI	GCAGTG	1 cut(s)	138
BtsIMutI	CAGTG	6 cut(s)	138, 189, 1158, 1188, 1389, 1497
BveI	ACCTGC	1 cut(s)	1081
Cac8I	GCNNGC	4 cut(s)	145, 498, 1078, 1254
CaiI	CAGNNNCTG	1 cut(s)	1578
Cfr10I	RCCGGY	2 cut(s)	101, 634
Cfr13I	GGNCC	4 cut(s)	108, 220, 881, 1263
Csp6I	GTAC	4 cut(s)	244, 708, 920, 1362
CviAII	CATG	4 cut(s)	497, 813, 1379, 1427
CviQI	GTAC	4 cut(s)	244, 708, 920, 1362
DdeI	CTNAG	5 cut(s)	171, 181, 232, 855, 1132
DpnI	GATC	4 cut(s)	349, 477, 627, 656
DpnII	GATC	4 cut(s)	347, 475, 625, 654
DrdI	GACNNNNNNGTC	1 cut(s)	490
DseDI	GACNNNNNNGTC	1 cut(s)	490
EaeI	YGGCCR	1 cut(s)	1494
Eam1104I	CTCTTC	2 cut(s)	328, 980
EarI	CTCTTC	2 cut(s)	328, 980
EciI	GGCGGA	1 cut(s)	147
Ecl136II	GAGCTC	1 cut(s)	1333
Eco130I	CCWWGG	2 cut(s)	1378, 1522
Eco24I	GRGCYC	2 cut(s)	1335, 1530
Eco47I	GGWCC	3 cut(s)	108, 220, 1263
Eco53kI	GAGCTC	1 cut(s)	1333
Eco88I	CYCGRG	1 cut(s)	805
EcoICRI	GAGCTC	1 cut(s)	1333
EcoO109I	RGGNCCY	1 cut(s)	220
EcoRI	GAATTC	1 cut(s)	528
EcoRII	CCWGG	4 cut(s)	600, 1335, 1467, 1477
EcoT14I	CCWWGG	2 cut(s)	1378, 1522
EcoT38I	GRGCYC	2 cut(s)	1335, 1530
ErhI	CCWWGG	2 cut(s)	1378, 1522
FaeI	CATG	4 cut(s)	500, 816, 1382, 1430
FalI	AAGNNNNNCTT	2 cut(s)	421, 453
FaqI	GGGAC	1 cut(s)	233
FatI	CATG	4 cut(s)	496, 812, 1378, 1426
FauI	CCCGC	2 cut(s)	921, 999
FbaI	TGATCA	1 cut(s)	475
FblI	GTMKAC	3 cut(s)	681, 1368, 1407
Fnu4HI	GCNGC	9 cut(s)	26, 148, 159, 288, 760, 850, 963, 1023, 1244
FokI	GGATG	1 cut(s)	446
FriOI	GRGCYC	2 cut(s)	1335, 1530
Fsp4HI	GCNGC	9 cut(s)	26, 148, 159, 288, 760, 850, 963, 1023, 1244
FspBI	CTAG	5 cut(s)	155, 341, 456, 1077, 1253
GluI	GCNGC	9 cut(s)	26, 148, 159, 288, 760, 850, 963, 1023, 1244
GsuI	CTGGAG	1 cut(s)	1319
HaeIII	GGCC	2 cut(s)	882, 1496
HapII	CCGG	2 cut(s)	102, 635
Hin1II	CATG	4 cut(s)	500, 816, 1382, 1430
HincII	GTYRAC	2 cut(s)	1408, 1461
HindII	GTYRAC	2 cut(s)	1408, 1461
HindIII	AAGCTT	3 cut(s)	295, 780, 1142
HinfI	GANTC	7 cut(s)	452, 459, 484, 741, 997, 1130, 1472
HpaII	CCGG	2 cut(s)	102, 635
HphI	GGTGA	3 cut(s)	201, 830, 1467
Hpy166II	GTNNAC	5 cut(s)	37, 682, 1369, 1408, 1461
Hpy188I	TCNGA	4 cut(s)	172, 329, 699, 858
Hpy188III	TCNNGA	6 cut(s)	304, 456, 667, 748, 887, 1541
Hpy8I	GTNNAC	5 cut(s)	37, 682, 1369, 1408, 1461
HpyAV	CCTTC	6 cut(s)	121, 235, 925, 938, 1132, 1474
HpyCH4III	ACNGT	7 cut(s)	661, 679, 1096, 1357, 1366, 1393, 1501
HpyCH4V	TGCA	9 cut(s)	16, 143, 161, 290, 674, 971, 1070, 1347, 1389
HpyF10VI	GCNNNNNNNGC	7 cut(s)	22, 144, 759, 968, 1031, 1067, 1249
HpyF3I	CTNAG	5 cut(s)	171, 181, 232, 855, 1132
Hsp92II	CATG	4 cut(s)	500, 816, 1382, 1430
KflI	GGGWCCC	1 cut(s)	220
KpnI	GGTACC	2 cut(s)	711, 1365
Ksp22I	TGATCA	1 cut(s)	475
Kzo9I	GATC	4 cut(s)	347, 475, 625, 654
LmnI	GCTCC	4 cut(s)	556, 581, 839, 1338
Lsp1109I	GCAGC	9 cut(s)	12, 134, 145, 274, 771, 861, 949, 1009, 1230
LweI	GCATC	5 cut(s)	25, 424, 1305, 1497, 1543
MaeI	CTAG	5 cut(s)	155, 341, 456, 1077, 1253
MaeIII	GTNAC	2 cut(s)	265, 1183
MalI	GATC	4 cut(s)	349, 477, 627, 656
MbiI	CCGCTC	1 cut(s)	916
MboI	GATC	4 cut(s)	347, 475, 625, 654
MfeI	CAATTG	2 cut(s)	1065, 1272
MhlI	GDGCHC	2 cut(s)	1335, 1530
MlsI	TGGCCA	1 cut(s)	1496
MluCI	AATT	9 cut(s)	176, 322, 528, 576, 1065, 1116, 1272, 1414, 1533
MluNI	TGGCCA	1 cut(s)	1496
MlyI	GAGTC	2 cut(s)	478, 1124
MmeI	TCCRAC	1 cut(s)	1025
MnlI	CCTC	9 cut(s)	128, 194, 323, 338, 415, 797, 864, 894, 1051
Mox20I	TGGCCA	1 cut(s)	1496
MscI	TGGCCA	1 cut(s)	1496
MseI	TTAA	4 cut(s)	509, 869, 1259, 1434
MslI	CAYNNNNRTG	1 cut(s)	1377
Msp20I	TGGCCA	1 cut(s)	1496
MspA1I	CMGCKG	2 cut(s)	287, 623
MspI	CCGG	2 cut(s)	102, 635
MspR9I	CCNGG	4 cut(s)	602, 1337, 1469, 1479
MunI	CAATTG	2 cut(s)	1065, 1272
Mva1269I	GAATGC	1 cut(s)	676
MvaI	CCWGG	4 cut(s)	602, 1337, 1469, 1479
MwoI	GCNNNNNNNGC	7 cut(s)	22, 144, 759, 968, 1031, 1067, 1249
NcoI	CCATGG	1 cut(s)	1378
NdeII	GATC	4 cut(s)	347, 475, 625, 654
NheI	GCTAGC	2 cut(s)	1076, 1252
NlaIII	CATG	4 cut(s)	500, 816, 1382, 1430
NlaIV	GGNNCC	4 cut(s)	221, 222, 709, 1363
NmuCI	GTSAC	1 cut(s)	1183
NspI	RCATGY	1 cut(s)	500
NspV	TTCGAA	2 cut(s)	56, 1292
PaeI	GCATGC	1 cut(s)	500
PaqCI	CACCTGC	1 cut(s)	1081
PctI	GAATGC	1 cut(s)	676
PfeI	GAWTC	5 cut(s)	452, 459, 741, 997, 1472
PfoI	TCCNGGA	2 cut(s)	1335, 1467
PkrI	GCNGC	9 cut(s)	27, 149, 160, 289, 761, 851, 964, 1024, 1245
PleI	GAGTC	2 cut(s)	478, 1124
PpsI	GAGTC	2 cut(s)	478, 1124
PpuMI	RGGWCCY	1 cut(s)	220
PshAI	GACNNNNGTC	1 cut(s)	1355
Psp124BI	GAGCTC	1 cut(s)	1335
Psp5II	RGGWCCY	1 cut(s)	220
Psp6I	CCWGG	4 cut(s)	600, 1335, 1467, 1477
PspGI	CCWGG	4 cut(s)	600, 1335, 1467, 1477
PspN4I	GGNNCC	4 cut(s)	221, 222, 709, 1363
PspPI	GGNCC	4 cut(s)	108, 220, 881, 1263
PspPPI	RGGWCCY	1 cut(s)	220
PstI	CTGCAG	1 cut(s)	145
PstNI	CAGNNNCTG	1 cut(s)	1578
PvuII	CAGCTG	2 cut(s)	287, 623
RsaI	GTAC	4 cut(s)	245, 709, 921, 1363
RsaNI	GTAC	4 cut(s)	244, 708, 920, 1362
RseI	CAYNNNNRTG	1 cut(s)	1377
SacI	GAGCTC	1 cut(s)	1335
SalI	GTCGAC	1 cut(s)	1406
SaqAI	TTAA	4 cut(s)	509, 869, 1259, 1434
SatI	GCNGC	9 cut(s)	26, 148, 159, 288, 760, 850, 963, 1023, 1244
Sau3AI	GATC	4 cut(s)	347, 475, 625, 654
Sau96I	GGNCC	4 cut(s)	108, 220, 881, 1263
ScaI	AGTACT	1 cut(s)	245
SchI	GAGTC	2 cut(s)	478, 1124
ScrFI	CCNGG	4 cut(s)	602, 1337, 1469, 1479
SduI	GDGCHC	2 cut(s)	1335, 1530
SfaNI	GCATC	5 cut(s)	25, 424, 1305, 1497, 1543
SfcI	CTRYAG	1 cut(s)	141
SfuI	TTCGAA	2 cut(s)	56, 1292
SinI	GGWCC	3 cut(s)	108, 220, 1263
SmiMI	CAYNNNNRTG	1 cut(s)	1377
SmlI	CTYRAG	4 cut(s)	729, 885, 1247, 1441
SmoI	CTYRAG	4 cut(s)	729, 885, 1247, 1441
SphI	GCATGC	1 cut(s)	500
Sse9I	AATT	9 cut(s)	176, 322, 528, 576, 1065, 1116, 1272, 1414, 1533
SsiI	CCGC	3 cut(s)	132, 914, 992
SspMI	CTAG	5 cut(s)	155, 341, 456, 1077, 1253
SstI	GAGCTC	1 cut(s)	1335
StyD4I	CCNGG	4 cut(s)	600, 1335, 1467, 1477
StyI	CCWWGG	2 cut(s)	1378, 1522
TaaI	ACNGT	7 cut(s)	661, 679, 1096, 1357, 1366, 1393, 1501
TaqI	TCGA	7 cut(s)	56, 90, 114, 305, 594, 1292, 1407
TaqII	GACCGA	2 cut(s)	96, 1253
TasI	AATT	9 cut(s)	176, 322, 528, 576, 1065, 1116, 1272, 1414, 1533
TatI	WGTACW	1 cut(s)	243
TfiI	GAWTC	5 cut(s)	452, 459, 741, 997, 1472
Tru1I	TTAA	4 cut(s)	509, 869, 1259, 1434
Tru9I	TTAA	4 cut(s)	509, 869, 1259, 1434
TscAI	CASTG	6 cut(s)	145, 189, 1165, 1188, 1396, 1504
TseFI	GTSAC	1 cut(s)	1183
TseI	GCWGC	9 cut(s)	25, 147, 158, 287, 759, 849, 962, 1022, 1243
Tsp45I	GTSAC	1 cut(s)	1183
TspDTI	ATGAA	9 cut(s)	217, 288, 456, 733, 801, 965, 967, 1311, 1415
TspGWI	ACGGA	2 cut(s)	264, 477
TspRI	CASTG	6 cut(s)	145, 189, 1165, 1188, 1396, 1504
VpaK11BI	GGWCC	3 cut(s)	108, 220, 1263
XapI	RAATTY	3 cut(s)	176, 528, 1533
XbaI	TCTAGA	1 cut(s)	455
XceI	RCATGY	1 cut(s)	500
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1379
XmiI	GTMKAC	3 cut(s)	681, 1368, 1407
XspI	CTAG	5 cut(s)	155, 341, 456, 1077, 1253
ZrmI	AGTACT	1 cut(s)	245

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.