Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr13

Orthogroup ID

OG0003721

Physical Location & Seq

Genomic Coordinates Forward (+)

12960754 .. 12964668

Gene Structure 3915 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD13G1164200.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1920 bp

ATGTTCCGTAACAAAGAAAGTTTGGAGCCTCTTCTCGATTTTCTTCGTACACACAAACATGATGGACATGCAATGATGCTAAACGATCGGATTCAGAGCATACCCAGACTTCAGTCTGCTTTAGCAAAGGCAGAGGAATATCTTTCCAAGTTCCCGCCAACTACATCATATTCTGAATTTGAATTTGACTTACAAGGAATGGGATTTGAGAGAGGGTGGGGTGACACAGCACAACGGGTGTCAGAGATGGTGCATCTTCTCTTGGAAATTCTTCAGGCTCCAGATCCCTCTACCCTGGAAAATTTTCTTGGGAGGATCCCTATGGTGTTCAATGTTGTCATAGTGTCGCCACATGGCTACTTTGGCCAAGCTAACGTCTTGGGTTTGCCTGACACTGGAGGGCAGGTTGTTTATATACTGGATCAAGTGCGTGCCCTGGAGAGTGAGATGCTTCTTAGAATACAAAATCAAGGATTGGACGTTATTCCAAAAATTCTGATTGTTACCCGACTAATACCGGATGCAAAAGGGACAACATGCAACCAAAGATTGGAAAGAGTAAGTGGTACAGAATACACACATATCTTGCGGGTACCTTTCAGGACTGAGAATGGGATACTGCGGAAATGGATTTCAAGGTTTGATGTGTGGCCTTACTTGGAGACCTTTGCAGAGGATGCCTCGAATGAAATTGCCGCTGAGTTGCAAGGTGTTCCAGATCTAGTCATTGGAAACTATAGTGATGGAAATCTTGTTGCAACTCTGTTATCTTATAAACTGGGAATCACACAGTGCAATATTGCTCATGCATTGGAGAAAACAAAGTACCCAGATTCTGATATATTTTGGAAGAAGCATGAGGATAAGTACCATTTTTCAAGTCAATTCACAGCCGATCTCATTGCAATGAACAATGCAAATTTCATAATCACCAGTACATACCAAGAGATTGCTGGAAGCAAAAATAACGTTGGACAGTATGAAAGCCACACTGCCTTCACTCTTCCTGGGCTGTATCGAGTTGTTCATGGAATTGATGTTTTTGATCCCAAGTTCAATATCGTCTCCCCAGGAGCAGATATGTGTATATACTTTCCATATTCTGACAAGGAAAAAAGGCTTACTGCTCTACATGGGTCAATTGAAGAACTCTTGTATGGTGCCGAGCAGAACGATGAGCATATTGGGCTGTTAAGTGACAGATCAAAGCCTATTGTCTTTTCCATGGCAAGACTTGATAGAGTGAAAAATTTAACTGGACTTGTTGAGTGCTATGCTAAGAGCGCCAAGCTAAGAGAAATGGTAAACCTTGTTGTGGTTGGTGGTTACATGGATGTCAAGAACTCTAGGGATAGAGAAGAAACTGCAGAGATTGAAAAGATGCATGACCTCATTAAGAAATACAACTTGAGTGGTCAGTTCCGATGGATAGCAGCACAGATGAACCGTGCTCGTAATGGTGAGCTCTACCGCTACATTGCAGACACAAAAGGCGTCTTTGTGCAGCCTGCTTTCTATGAAGCTTTTGGCCTCACCGTGGTGGAAGCCATGACCTGTGGCCTTCCTACTTTTGCAACTTGTCATGGTGGCCCTGCTGAGATCATTGAGCACGGTTCCTCTGGGTTCCATGTTGATCCGTATAACCCTGATCAAGTGGCTGAACTTCTGATTGACTTCTTTGATCGGTGCCAGAAGGAACCTGGCTACTGGGAAAAGATATCTCAAGCGGGACTTAAACGAATTTATGAAAGGTACACTTGGAAGATATATTCAGAGAGGCTGCTCACATTAGCTGGGGTTTATGGCTTCTGGAAGCATGTGTCTAAGCTTGAGAGGCGAGAGACAAGGCGATATCTGGAGATGTTTTACATTCTTAAGTACAGAAATCTGGTGAAGTCCATTCCGCTGGCCGTTGAATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001666 GO:0003006 GO:0003674 GO:0003824 GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005975 GO:0005976 GO:0005982 GO:0005984 GO:0005985 GO:0006073 GO:0006950 GO:0007275 GO:0008150 GO:0008152 GO:0008194 GO:0009311 GO:0009505 GO:0009628 GO:0009791 GO:0009987 GO:0010154 GO:0010431 GO:0016020 GO:0016157 GO:0016740 GO:0016757 GO:0016758 GO:0021700 GO:0022414 GO:0030312 GO:0032501 GO:0032502 GO:0032504 GO:0035251 GO:0036293 GO:0043170 GO:0044042 GO:0044237 GO:0044238 GO:0044260 GO:0044262 GO:0044264 GO:0044424 GO:0044444 GO:0044464 GO:0046527 GO:0048316 GO:0048608 GO:0048609 GO:0048731 GO:0048856 GO:0050896 GO:0061458 GO:0070482 GO:0071695 GO:0071704 GO:0071944

KEGG Pathways

Metabolic & Signaling

ko00500 ko01100 map00500 map01100

Pfam Domains

Protein Families

Glycos_transf_1 Sucrose_synth

Protein Analysis

640

Amino Acids

73.0

Weight (kDa)

6.03

Isoelectric Point (pI)

34.68

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SUS_EPBD	PF24862	1 - 75	2.8e-26	Sucrose synthase EPBD domain
GT-B_Sucrose_synth	PF00862	98 - 386	5.1e-167	Sucrose synthase first GT-B domain
Glycos_transf_1	PF00534	396 - 561	1e-31	Glycosyl transferases group 1
Glyco_trans_1_4	PF13692	404 - 559	1.2e-15	Glycosyl transferases group 1

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003721)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G49190 AT5G49190 AT5G49190
fragaria_vesca	FvH4_4g18710
malus_domestica	MD13G1164000.v1.1 MD13G1164100.v1.1 MD13G1164200.v1.1 MD16G1164000.v1.1
prunus_persica	Prupe.1G131700_v2.0.a1 Prupe.1G131700_v2.0.a1 Prupe.1G131700_v2.0.a1 Prupe.1G131700_v2.0.a1
pyrus_communis	pycom13g14010 pycom16g13860 pycom16g13870
rosa_chinensis	RchiOBHm_Chr4g0423411
rosa_laevigata	RLG00000007559
rosa_multiflora	Rmu_sc0000893.1_g000010 Rmu_ssc0000174.1_g000013
rosa_roxburghii	Rroxscaffold_4G00291020 Rroxscaffold_5G00365630
rosa_rugosa	Rorug04G0187400 Rorug04G0187500 Rorug04G0187600 Rorug04G0187700 Rorug07G0218200
rosa_samantha	Rh3BG353800 Rh4AG246400 Rh4BG251800 Rh4CG260300 Rh4DG247200 Rh6BG052100
rosa_wichuraiana	Rw1G026460 Rw4G021170

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	774
Acc36I	ACCTGC	1 cut(s)	394
Acc65I	GGTACC	1 cut(s)	592
AccB1I	GGYRCC	3 cut(s)	592, 1160, 1686
AccB7I	CCANNNNNTGG	1 cut(s)	550
AciI	CCGC	7 cut(s)	155, 589, 622, 696, 1471, 1727, 1904
AclI	AACGTT	1 cut(s)	969
AclWI	GGATC	6 cut(s)	278, 310, 323, 429, 1040, 1628
AcoI	YGGCCR	2 cut(s)	364, 1908
AcsI	RAATTY	8 cut(s)	176, 182, 267, 301, 492, 919, 1249, 1740
AcuI	CTGAAG	2 cut(s)	95, 257
AcyI	GRCGYC	1 cut(s)	1494
AdeI	CACNNNGTG	1 cut(s)	792
AfaI	GTAC	8 cut(s)	49, 568, 594, 827, 869, 937, 1754, 1880
AfiI	CCNNNNNNNGG	4 cut(s)	395, 550, 1315, 1537
AflII	CTTAAG	1 cut(s)	1874
AgsI	TTSAA	8 cut(s)	182, 331, 636, 879, 1057, 1145, 1376, 1916
AjnI	CCWGG	5 cut(s)	294, 435, 1006, 1069, 1699
AjuI	GAANNNNNNNTTGG	2 cut(s)	291, 323
AleI	CACNNNNGTG	1 cut(s)	1538
AluBI	AGCT	6 cut(s)	371, 1291, 1465, 1523, 1793, 1828
AluI	AGCT	6 cut(s)	371, 1291, 1465, 1523, 1793, 1828
Alw21I	GWGCWC	3 cut(s)	1453, 1467, 1611
Alw26I	GTCTC	3 cut(s)	656, 1069, 1835
AlwI	GGATC	6 cut(s)	278, 310, 323, 429, 1040, 1628
AlwNI	CAGNNNCTG	1 cut(s)	836
AoxI	GGCC	6 cut(s)	364, 650, 1528, 1558, 1588, 1908
ApeKI	GCWGC	3 cut(s)	1433, 1504, 1780
ApoI	RAATTY	8 cut(s)	176, 182, 267, 301, 492, 919, 1249, 1740
Asp700I	GAANNNNTTC	2 cut(s)	270, 303
Asp718I	GGTACC	1 cut(s)	592
AspLEI	GCGC	1 cut(s)	1286
AspS9I	GGNCC	1 cut(s)	1589
AsuHPI	GGTGA	5 cut(s)	233, 922, 1472, 1525, 1903
BaeGI	GKGCMC	1 cut(s)	436
BalI	TGGCCA	1 cut(s)	366
BamHI	GGATCC	1 cut(s)	315
BanI	GGYRCC	3 cut(s)	592, 1160, 1686
BanII	GRGCYC	1 cut(s)	1467
Bbv12I	GWGCWC	3 cut(s)	1453, 1467, 1611
BbvI	GCAGC	3 cut(s)	1445, 1516, 1767
BccI	CCATC	4 cut(s)	56, 241, 737, 1419
BceAI	ACGGC	1 cut(s)	1895
BcgI	CGANNNNNNTGC	2 cut(s)	884, 918
BciT130I	CCWGG	5 cut(s)	296, 437, 1008, 1071, 1701
BciVI	GTATCC	1 cut(s)	609
BclI	TGATCA	1 cut(s)	1648
BcoDI	GTCTC	3 cut(s)	656, 1069, 1835
BfaI	CTAG	2 cut(s)	722, 1347
BfmI	CTRYAG	2 cut(s)	736, 1365
BfoI	RGCGCY	1 cut(s)	1287
BfrI	CTTAAG	1 cut(s)	1874
BfuAI	ACCTGC	1 cut(s)	394
BfuI	GTATCC	1 cut(s)	609
BglII	AGATCT	1 cut(s)	718
BisI	GCNGC	4 cut(s)	696, 1434, 1505, 1781
BlsI	GCNGC	4 cut(s)	697, 1435, 1506, 1782
Bme1390I	CCNGG	5 cut(s)	296, 437, 1008, 1071, 1701
BmgT120I	GGNCC	1 cut(s)	1589
BmiI	GGNNCC	9 cut(s)	27, 279, 317, 594, 1162, 1615, 1625, 1688, 1698
BmrFI	CCNGG	5 cut(s)	296, 437, 1008, 1071, 1701
BmrI	ACTGGG	2 cut(s)	788, 1717
BmsI	GCATC	6 cut(s)	66, 262, 438, 511, 667, 1371
BmuI	ACTGGG	2 cut(s)	788, 1717
BoxI	GACNNNNGTC	1 cut(s)	112
BplI	GAGNNNNNCTC	2 cut(s)	665, 697
BpmI	CTGGAG	4 cut(s)	264, 417, 458, 1877
BpuEI	CTTGAG	3 cut(s)	1429, 1707, 1850
BsaBI	GATNNNNATC	1 cut(s)	747
BsaHI	GRCGYC	1 cut(s)	1494
BsaI	GGTCTC	1 cut(s)	656
BsaJI	CCNNGG	6 cut(s)	294, 435, 1007, 1069, 1224, 1536
BsaWI	WCCGGW	1 cut(s)	517
BsaXI	ACNNNNNCTCC	2 cut(s)	390, 420
Bsc4I	CCNNNNNNNGG	4 cut(s)	395, 550, 1315, 1537
Bse1I	ACTGG	6 cut(s)	400, 423, 783, 933, 1261, 1712
Bse3DI	GCAATG	4 cut(s)	78, 900, 912, 1476
Bse8I	GATNNNNATC	1 cut(s)	747
BseBI	CCWGG	5 cut(s)	296, 437, 1008, 1071, 1701
BseDI	CCNNGG	6 cut(s)	294, 435, 1007, 1069, 1224, 1536
BseGI	GGATG	3 cut(s)	526, 682, 1339
BseJI	GATNNNNATC	1 cut(s)	747
BseLI	CCNNNNNNNGG	4 cut(s)	395, 550, 1315, 1537
BseMI	GCAATG	4 cut(s)	78, 900, 912, 1476
BseMII	CTCAG	3 cut(s)	597, 690, 1587
BseNI	ACTGG	6 cut(s)	400, 423, 783, 933, 1261, 1712
BseSI	GKGCMC	1 cut(s)	436
BseXI	GCAGC	3 cut(s)	1445, 1516, 1767
BseYI	CCCAGC	1 cut(s)	1793
BsgI	GTGCAG	1 cut(s)	1523
Bsh1285I	CGRYCG	1 cut(s)	88
BshFI	GGCC	6 cut(s)	366, 652, 1530, 1560, 1590, 1910
BshNI	GGYRCC	3 cut(s)	592, 1160, 1686
BsiEI	CGRYCG	1 cut(s)	88
BsiHKAI	GWGCWC	3 cut(s)	1453, 1467, 1611
BsiSI	CCGG	1 cut(s)	518
BslFI	GGGAC	2 cut(s)	544, 1743
BslI	CCNNNNNNNGG	4 cut(s)	395, 550, 1315, 1537
BsmAI	GTCTC	3 cut(s)	656, 1069, 1835
BsmBI	CGTCTC	1 cut(s)	1069
BsmFI	GGGAC	2 cut(s)	544, 1743
BsnI	GGCC	6 cut(s)	366, 652, 1530, 1560, 1590, 1910
Bso31I	GGTCTC	1 cut(s)	656
Bsp1286I	GDGCHC	4 cut(s)	436, 1453, 1467, 1611
Bsp19I	CCATGG	1 cut(s)	1224
BspACI	CCGC	7 cut(s)	155, 589, 622, 696, 1471, 1727, 1904
BspANI	GGCC	6 cut(s)	366, 652, 1530, 1560, 1590, 1910
BspCNI	CTCAG	3 cut(s)	598, 691, 1588
BspLI	GGNNCC	9 cut(s)	27, 279, 317, 594, 1162, 1615, 1625, 1688, 1698
BspMAI	CTGCAG	1 cut(s)	1369
BspMI	ACCTGC	1 cut(s)	394
BspPI	GGATC	6 cut(s)	278, 310, 323, 429, 1040, 1628
BspT107I	GGYRCC	3 cut(s)	592, 1160, 1686
BspTI	CTTAAG	1 cut(s)	1874
BspTNI	GGTCTC	1 cut(s)	656
BsrDI	GCAATG	4 cut(s)	78, 900, 912, 1476
BsrI	ACTGG	6 cut(s)	400, 423, 783, 933, 1261, 1712
BssECI	CCNNGG	6 cut(s)	294, 435, 1007, 1069, 1224, 1536
BssNI	GRCGYC	1 cut(s)	1494
BssT1I	CCWWGG	1 cut(s)	1224
Bst2UI	CCWGG	5 cut(s)	296, 437, 1008, 1071, 1701
Bst4CI	ACNGT	5 cut(s)	792, 978, 1448, 1537, 1613
Bst6I	CTCTTC	2 cut(s)	36, 1008
BstACI	GRCGYC	1 cut(s)	1494
BstAFI	CTTAAG	1 cut(s)	1874
BstAPI	GCANNNNNTGC	1 cut(s)	677
BstC8I	GCNNGC	3 cut(s)	432, 1509, 1908
BstDEI	CTNAG	7 cut(s)	455, 606, 699, 1278, 1292, 1596, 1824
BstDSI	CCRYGG	2 cut(s)	1224, 1536
BstF5I	GGATG	3 cut(s)	526, 682, 1339
BstH2I	RGCGCY	1 cut(s)	1287
BstHHI	GCGC	1 cut(s)	1286
BstMAI	GTCTC	3 cut(s)	656, 1069, 1835
BstMCI	CGRYCG	1 cut(s)	88
BstMWI	GCNNNNNNNGC	5 cut(s)	363, 677, 1186, 1283, 1834
BstNI	CCWGG	5 cut(s)	296, 437, 1008, 1071, 1701
BstNSI	RCATGY	3 cut(s)	71, 540, 1820
BstPAI	GACNNNNGTC	1 cut(s)	112
BstSCI	CCNGG	5 cut(s)	294, 435, 1006, 1069, 1699
BstSFI	CTRYAG	2 cut(s)	736, 1365
BstSLI	GKGCMC	1 cut(s)	436
BstV1I	GCAGC	3 cut(s)	1445, 1516, 1767
BstX2I	RGATCY	3 cut(s)	283, 315, 718
BstXI	CCANNNNNNTGG	1 cut(s)	1906
BstYI	RGATCY	3 cut(s)	283, 315, 718
BsuI	GTATCC	1 cut(s)	609
BsuRI	GGCC	6 cut(s)	366, 652, 1530, 1560, 1590, 1910
BtgI	CCRYGG	2 cut(s)	1224, 1536
BtsCI	GGATG	3 cut(s)	526, 682, 1339
BtsI	GCAGTG	1 cut(s)	990
BtsIMutI	CAGTG	3 cut(s)	393, 797, 990
BveI	ACCTGC	1 cut(s)	394
Cac8I	GCNNGC	3 cut(s)	432, 1509, 1908
CaiI	CAGNNNCTG	1 cut(s)	836
CfoI	GCGC	1 cut(s)	1286
Cfr13I	GGNCC	1 cut(s)	1589
CseI	GACGC	1 cut(s)	1483
Csp6I	GTAC	8 cut(s)	48, 567, 593, 826, 868, 936, 1753, 1879
CspCI	CAANNNNNGTGG	2 cut(s)	1393, 1428
CviQI	GTAC	8 cut(s)	48, 567, 593, 826, 868, 936, 1753, 1879
DdeI	CTNAG	7 cut(s)	455, 606, 699, 1278, 1292, 1596, 1824
DraIII	CACNNNGTG	1 cut(s)	792
EaeI	YGGCCR	2 cut(s)	364, 1908
Eam1104I	CTCTTC	2 cut(s)	36, 1008
EarI	CTCTTC	2 cut(s)	36, 1008
Ecl136II	GAGCTC	1 cut(s)	1465
Eco130I	CCWWGG	1 cut(s)	1224
Eco24I	GRGCYC	1 cut(s)	1467
Eco31I	GGTCTC	1 cut(s)	656
Eco32I	GATATC	2 cut(s)	1719, 1853
Eco53kI	GAGCTC	1 cut(s)	1465
Eco57I	CTGAAG	2 cut(s)	95, 257
EcoICRI	GAGCTC	1 cut(s)	1465
EcoRII	CCWGG	5 cut(s)	294, 435, 1006, 1069, 1699
EcoRV	GATATC	2 cut(s)	1719, 1853
EcoT14I	CCWWGG	1 cut(s)	1224
EcoT22I	ATGCAT	2 cut(s)	811, 1386
EcoT38I	GRGCYC	1 cut(s)	1467
ErhI	CCWWGG	1 cut(s)	1224
Esp3I	CGTCTC	1 cut(s)	1069
FalI	AAGNNNNNCTT	4 cut(s)	1716, 1748, 1741, 1773
FaqI	GGGAC	2 cut(s)	544, 1743
FauI	CCCGC	3 cut(s)	162, 582, 1720
FbaI	TGATCA	1 cut(s)	1648
Fnu4HI	GCNGC	4 cut(s)	696, 1434, 1505, 1781
FokI	GGATG	3 cut(s)	533, 689, 1346
FriOI	GRGCYC	1 cut(s)	1467
Fsp4HI	GCNGC	4 cut(s)	696, 1434, 1505, 1781
FspBI	CTAG	2 cut(s)	722, 1347
GlaI	GCGC	1 cut(s)	1285
GluI	GCNGC	4 cut(s)	696, 1434, 1505, 1781
GsaI	CCCAGC	1 cut(s)	1797
GsuI	CTGGAG	4 cut(s)	264, 417, 458, 1877
HaeII	RGCGCY	1 cut(s)	1287
HaeIII	GGCC	6 cut(s)	366, 652, 1530, 1560, 1590, 1910
HapII	CCGG	1 cut(s)	518
HgaI	GACGC	1 cut(s)	1483
HhaI	GCGC	1 cut(s)	1286
Hin1I	GRCGYC	1 cut(s)	1494
Hin6I	GCGC	1 cut(s)	1284
HinP1I	GCGC	1 cut(s)	1284
HindIII	AAGCTT	2 cut(s)	1521, 1826
HinfI	GANTC	3 cut(s)	91, 783, 833
HpaII	CCGG	1 cut(s)	518
HphI	GGTGA	5 cut(s)	233, 922, 1472, 1525, 1903
Hpy166II	GTNNAC	3 cut(s)	50, 1306, 1755
Hpy188III	TCNNGA	7 cut(s)	35, 281, 601, 716, 1339, 1810, 1856
Hpy8I	GTNNAC	3 cut(s)	50, 1306, 1755
HpyAV	CCTTC	3 cut(s)	1006, 1571, 1687
HpyCH4III	ACNGT	5 cut(s)	792, 978, 1448, 1537, 1613
HpyCH4IV	ACGT	3 cut(s)	375, 480, 969
HpyF10VI	GCNNNNNNNGC	5 cut(s)	363, 677, 1186, 1283, 1834
HpyF3I	CTNAG	7 cut(s)	455, 606, 699, 1278, 1292, 1596, 1824
HpySE526I	ACGT	3 cut(s)	375, 480, 969
Hsp92I	GRCGYC	1 cut(s)	1494
HspAI	GCGC	1 cut(s)	1284
KpnI	GGTACC	1 cut(s)	596
Ksp22I	TGATCA	1 cut(s)	1648
LmnI	GCTCC	3 cut(s)	25, 283, 1073
Lsp1109I	GCAGC	3 cut(s)	1445, 1516, 1767
LweI	GCATC	6 cut(s)	66, 262, 438, 511, 667, 1371
MaeI	CTAG	2 cut(s)	722, 1347
MaeII	ACGT	3 cut(s)	375, 480, 969
MaeIII	GTNAC	5 cut(s)	8, 221, 502, 1196, 1325
MboII	GAAGA	9 cut(s)	23, 35, 248, 263, 862, 995, 1157, 1370, 1774
MfeI	CAATTG	1 cut(s)	1140
MflI	RGATCY	3 cut(s)	283, 315, 718
MhlI	GDGCHC	4 cut(s)	436, 1453, 1467, 1611
MlsI	TGGCCA	1 cut(s)	366
MluNI	TGGCCA	1 cut(s)	366
MmeI	TCCRAC	1 cut(s)	952
Mox20I	TGGCCA	1 cut(s)	366
Mph1103I	ATGCAT	2 cut(s)	811, 1386
MroXI	GAANNNNTTC	2 cut(s)	270, 303
MscI	TGGCCA	1 cut(s)	366
MseI	TTAA	5 cut(s)	1193, 1253, 1395, 1734, 1875
MslI	CAYNNNNRTG	3 cut(s)	57, 905, 1538
Msp20I	TGGCCA	1 cut(s)	366
MspA1I	CMGCKG	2 cut(s)	698, 1906
MspCI	CTTAAG	1 cut(s)	1874
MspI	CCGG	1 cut(s)	518
MspR9I	CCNGG	5 cut(s)	296, 437, 1008, 1071, 1701
MunI	CAATTG	1 cut(s)	1140
MvaI	CCWGG	5 cut(s)	296, 437, 1008, 1071, 1701
MwoI	GCNNNNNNNGC	5 cut(s)	363, 677, 1186, 1283, 1834
NcoI	CCATGG	1 cut(s)	1224
NlaIV	GGNNCC	9 cut(s)	27, 279, 317, 594, 1162, 1615, 1625, 1688, 1698
NmeAIII	GCCGAG	1 cut(s)	1189
NmuCI	GTSAC	2 cut(s)	221, 1196
NsiI	ATGCAT	2 cut(s)	811, 1386
NspI	RCATGY	3 cut(s)	71, 540, 1820
OliI	CACNNNNGTG	1 cut(s)	1538
PdmI	GAANNNNTTC	2 cut(s)	270, 303
PfeI	GAWTC	3 cut(s)	91, 783, 833
PflMI	CCANNNNNTGG	1 cut(s)	550
PkrI	GCNGC	4 cut(s)	697, 1435, 1506, 1782
Ple19I	CGATCG	1 cut(s)	88
PshAI	GACNNNNGTC	1 cut(s)	112
PsiI	TTATAA	1 cut(s)	774
Psp124BI	GAGCTC	1 cut(s)	1467
Psp1406I	AACGTT	1 cut(s)	969
Psp6I	CCWGG	5 cut(s)	294, 435, 1006, 1069, 1699
PspFI	CCCAGC	1 cut(s)	1793
PspGI	CCWGG	5 cut(s)	294, 435, 1006, 1069, 1699
PspN4I	GGNNCC	9 cut(s)	27, 279, 317, 594, 1162, 1615, 1625, 1688, 1698
PspPI	GGNCC	1 cut(s)	1589
PstI	CTGCAG	1 cut(s)	1369
PstNI	CAGNNNCTG	1 cut(s)	836
PsuI	RGATCY	3 cut(s)	283, 315, 718
PvuI	CGATCG	1 cut(s)	88
RsaI	GTAC	8 cut(s)	49, 568, 594, 827, 869, 937, 1754, 1880
RsaNI	GTAC	8 cut(s)	48, 567, 593, 826, 868, 936, 1753, 1879
RseI	CAYNNNNRTG	3 cut(s)	57, 905, 1538
SacI	GAGCTC	1 cut(s)	1467
SaqAI	TTAA	5 cut(s)	1193, 1253, 1395, 1734, 1875
SatI	GCNGC	4 cut(s)	696, 1434, 1505, 1781
Sau96I	GGNCC	1 cut(s)	1589
ScrFI	CCNGG	5 cut(s)	296, 437, 1008, 1071, 1701
SduI	GDGCHC	4 cut(s)	436, 1453, 1467, 1611
SfaNI	GCATC	6 cut(s)	66, 262, 438, 511, 667, 1371
SfcI	CTRYAG	2 cut(s)	736, 1365
SmiMI	CAYNNNNRTG	3 cut(s)	57, 905, 1538
SmlI	CTYRAG	4 cut(s)	1408, 1722, 1829, 1874
SmoI	CTYRAG	4 cut(s)	1408, 1722, 1829, 1874
SsiI	CCGC	7 cut(s)	155, 589, 622, 696, 1471, 1727, 1904
SspI	AATATT	1 cut(s)	799
SspMI	CTAG	2 cut(s)	722, 1347
SstI	GAGCTC	1 cut(s)	1467
StyD4I	CCNGG	5 cut(s)	294, 435, 1006, 1069, 1699
StyI	CCWWGG	1 cut(s)	1224
TaaI	ACNGT	5 cut(s)	792, 978, 1448, 1537, 1613
TaiI	ACGT	3 cut(s)	378, 483, 972
TaqI	TCGA	3 cut(s)	36, 683, 1018
TatI	WGTACW	2 cut(s)	935, 1878
TauI	GCSGC	1 cut(s)	698
TfiI	GAWTC	3 cut(s)	91, 783, 833
Tru1I	TTAA	5 cut(s)	1193, 1253, 1395, 1734, 1875
Tru9I	TTAA	5 cut(s)	1193, 1253, 1395, 1734, 1875
TscAI	CASTG	3 cut(s)	400, 797, 997
TseFI	GTSAC	2 cut(s)	221, 1196
TseI	GCWGC	3 cut(s)	1433, 1504, 1780
Tsp45I	GTSAC	2 cut(s)	221, 1196
TspDTI	ATGAA	8 cut(s)	702, 913, 923, 996, 1016, 1457, 1533, 1761
TspGWI	ACGGA	1 cut(s)	1626
TspRI	CASTG	3 cut(s)	400, 797, 997
Van91I	CCANNNNNTGG	1 cut(s)	550
Vha464I	CTTAAG	1 cut(s)	1874
XapI	RAATTY	8 cut(s)	176, 182, 267, 301, 492, 919, 1249, 1740
XceI	RCATGY	3 cut(s)	71, 540, 1820
XcmI	CCANNNNNNNNNTGG	2 cut(s)	950, 1697
XmnI	GAANNNNTTC	2 cut(s)	270, 303
XspI	CTAG	2 cut(s)	722, 1347
Zsp2I	ATGCAT	2 cut(s)	811, 1386

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.