pycom13g14010

Sucrose-cleaving enzyme that provides UDP-glucose and fructose for various metabolic pathways

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr13
Physical Location & Seq
Forward (+)
10034548 .. 10037017
2470 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom13g14010.3

Sequence Viewer

Length: 1230 bp
ATGCGCAACACCATTCAGGAAACCCTCGCTGCTCACCGCAATGAGCTCGTTTCTCTTCTCTCCAGGTTTTGTTGTGTTGGAAGGTATGTTGCTCGAGGAAATGGGATTCTGCAACCCCATCAAATGATAAACGAGCTCGAAAGCGTGATCATGGAGGATGAAGGCATGCAGAAGCTCAAAGATAGCTCCTTCAGCAAAGTCTTACAGTCTGCTCAGGAAGCAATTGTTCTGGCTCCTTTCGTGGCTTTTGCCCTTCGTCCAAGGCCTGGTGTTTGGGAGTATGTTCGAGTTAATGAGTATGAACTCAGTGTGGATCATTTGAGTGTTGCTGAATATCTTCGGTTCAAGGAAGAGCTTATGGACGGAGAGTGCAACGATAAGTATGTGCTTGAACTCGATCTGGAGCCATTTAATGCATCATTCCCTCGACCAACCCGCTCGTCATCAATTGGAAATGGGGTTCAATTCCTTAACCGCCACTTGTCTTCAGTTATGTTCCGTAACAAAGAAAGTTTGGAGCCTCTTCTCGATTTTCTTCGTACACACAAACATGATGGACATTCTGCTTTAGCAAAGGCAGAGGAATATCTTTCTAAGTTCCCGCCAACTACACCATATTCTGAATTTGAATTTGAGGATAATATGATTGCTTTAGATGGTACCTTTAATCTTCTTTACATTGTGTGCAGCTTACAAGGAATGGGATTTGAGAGAGGGTGGGGTGACACAGCACAACGGGTGTCAGAGATGGTGCATCTTCTCTTGGAAATTCTTCAGGCTCCAGATCCCTCTACCCTGGAAAATTTTCTTGGGAGGATCCCTATGGTGTTCAATGTTGTCATAGTGTCGCCACACGGCTACTTTGGCCAAGCTAACGTCTTGGGTTTGCCCGACACTGGAGGGCAGGTCGTTTATATACTGGATCAAGTGCGTGCCCTGGAGAGTGAGATGCTTCTTAGAATACAAAATCAAGGATTGGATGTTATTCCAAAAATTCTGATTGTTACCCGACTGATACCGGATGCAAAAGGGACAACATGCAACCAAAGATTGGAAAGAGTCAGTGGTACAGAATACACACATATCTTGCGGGTACCTTTCAGGACTGAGAATGGGATACTGCGGAAATGGATTTCAAGGTTTGATGTGTGGCCTTACTTGGAGACCTTTGCAGAGGATGCCTCGAATGAAATTGCCGCTGAGTTGCAAGGTGTTCCAGATCGATCTTAA

Protein Analysis

410

Amino Acids

46.43

Weight (kDa)

5.16

Isoelectric Point (pI)

37.6

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 5
Acc36I ACCTGC 1 cut(s) 895
Acc65I GGTACC 2 cut(s) 659, 1093
AccB1I GGYRCC 2 cut(s) 659, 1093
AccB7I CCANNNNNTGG 2 cut(s) 266, 1051
AccBSI CCGCTC 1 cut(s) 438
AciI CCGC 7 cut(s) 37, 436, 475, 602, 1090, 1123, 1197
AclWI GGATC 5 cut(s) 321, 779, 811, 824, 930
AcoI YGGCCR 1 cut(s) 865
AcsI RAATTY 5 cut(s) 623, 629, 768, 802, 993
AcuI CTGAAG 3 cut(s) 175, 471, 758
AfaI GTAC 4 cut(s) 541, 661, 1069, 1095
AfiI CCNNNNNNNGG 3 cut(s) 266, 896, 1051
AgsI TTSAA 6 cut(s) 346, 392, 464, 629, 832, 1137
AjnI CCWGG 4 cut(s) 62, 265, 795, 936
AjuI GAANNNNNNNTTGG 2 cut(s) 792, 824
AloI GAACNNNNNNTCC 2 cut(s) 444, 476
AluBI AGCT 7 cut(s) 46, 136, 175, 186, 355, 690, 872
AluI AGCT 7 cut(s) 46, 136, 175, 186, 355, 690, 872
Alw21I GWGCWC 2 cut(s) 48, 138
Alw26I GTCTC 1 cut(s) 1157
AlwI GGATC 5 cut(s) 321, 779, 811, 824, 930
Ama87I CYCGRG 1 cut(s) 93
AoxI GGCC 3 cut(s) 263, 865, 1151
ApeKI GCWGC 2 cut(s) 29, 687
ApoI RAATTY 5 cut(s) 623, 629, 768, 802, 993
Asp700I GAANNNNTTC 3 cut(s) 336, 771, 804
Asp718I GGTACC 2 cut(s) 659, 1093
AspLEI GCGC 1 cut(s) 6
AsuHPI GGTGA 2 cut(s) 26, 734
AvaI CYCGRG 1 cut(s) 93
BaeGI GKGCMC 1 cut(s) 937
BalI TGGCCA 1 cut(s) 867
BamHI GGATCC 1 cut(s) 816
BanI GGYRCC 2 cut(s) 659, 1093
BanII GRGCYC 2 cut(s) 48, 138
BbsI GAAGAC 1 cut(s) 477
Bbv12I GWGCWC 2 cut(s) 48, 138
BbvI GCAGC 2 cut(s) 16, 699
BccI CCATC 4 cut(s) 126, 548, 650, 742
BceAI ACGGC 1 cut(s) 871
BcgI CGANNNNNNTGC 2 cut(s) 28, 62
BciT130I CCWGG 4 cut(s) 64, 267, 797, 938
BciVI GTATCC 1 cut(s) 1110
BclI TGATCA 1 cut(s) 147
BcoDI GTCTC 1 cut(s) 1157
BfuAI ACCTGC 1 cut(s) 895
BfuI GTATCC 1 cut(s) 1110
BisI GCNGC 3 cut(s) 30, 688, 1197
BlsI GCNGC 3 cut(s) 31, 689, 1198
Bme1390I CCNGG 4 cut(s) 64, 267, 797, 938
BmeT110I CYCGRG 1 cut(s) 93
BmiI GGNNCC 7 cut(s) 234, 405, 519, 661, 780, 818, 1095
BmrFI CCNGG 4 cut(s) 64, 267, 797, 938
BmsI GCATC 5 cut(s) 425, 763, 939, 1012, 1168
BpiI GAAGAC 1 cut(s) 477
BplI GAGNNNNNCTC 2 cut(s) 1166, 1198
BpmI CTGGAG 5 cut(s) 46, 422, 765, 918, 959
Bpu10I CCTNAGC 1 cut(s) 213
Bsa29I ATCGAT 1 cut(s) 1222
BsaI GGTCTC 1 cut(s) 1157
BsaJI CCNNGG 3 cut(s) 260, 795, 936
BsaWI WCCGGW 1 cut(s) 1018
BsaXI ACNNNNNCTCC 2 cut(s) 891, 921
Bsc4I CCNNNNNNNGG 3 cut(s) 266, 896, 1051
Bse1I ACTGG 2 cut(s) 901, 924
Bse3DI GCAATG 1 cut(s) 46
BseBI CCWGG 4 cut(s) 64, 267, 797, 938
BseCI ATCGAT 1 cut(s) 1222
BseDI CCNNGG 3 cut(s) 260, 795, 936
BseGI GGATG 4 cut(s) 163, 985, 1027, 1183
BseLI CCNNNNNNNGG 3 cut(s) 266, 896, 1051
BseMI GCAATG 1 cut(s) 46
BseMII CTCAG 4 cut(s) 227, 319, 1098, 1191
BseNI ACTGG 2 cut(s) 901, 924
BseSI GKGCMC 1 cut(s) 937
BseXI GCAGC 2 cut(s) 16, 699
BsgI GTGCAG 1 cut(s) 706
BshFI GGCC 3 cut(s) 265, 867, 1153
BshNI GGYRCC 2 cut(s) 659, 1093
BshVI ATCGAT 1 cut(s) 1222
BsiHKAI GWGCWC 2 cut(s) 48, 138
BsiHKCI CYCGRG 1 cut(s) 93
BsiSI CCGG 1 cut(s) 1019
BslFI GGGAC 1 cut(s) 1045
BslI CCNNNNNNNGG 3 cut(s) 266, 896, 1051
BsmAI GTCTC 1 cut(s) 1157
BsmFI GGGAC 1 cut(s) 1045
BsnI GGCC 3 cut(s) 265, 867, 1153
Bso31I GGTCTC 1 cut(s) 1157
BsoBI CYCGRG 1 cut(s) 93
Bsp1286I GDGCHC 3 cut(s) 48, 138, 937
Bsp143I GATC 8 cut(s) 147, 313, 397, 784, 816, 922, 1219, 1223
BspACI CCGC 7 cut(s) 37, 436, 475, 602, 1090, 1123, 1197
BspANI GGCC 3 cut(s) 265, 867, 1153
BspCNI CTCAG 4 cut(s) 226, 318, 1099, 1192
BspDI ATCGAT 1 cut(s) 1222
BspLI GGNNCC 7 cut(s) 234, 405, 519, 661, 780, 818, 1095
BspMI ACCTGC 1 cut(s) 895
BspPI GGATC 5 cut(s) 321, 779, 811, 824, 930
BspQI GCTCTTC 1 cut(s) 345
BspT107I GGYRCC 2 cut(s) 659, 1093
BspTNI GGTCTC 1 cut(s) 1157
BsrBI CCGCTC 1 cut(s) 438
BsrDI GCAATG 1 cut(s) 46
BsrI ACTGG 2 cut(s) 901, 924
BssECI CCNNGG 3 cut(s) 260, 795, 936
BssMI GATC 8 cut(s) 147, 313, 397, 784, 816, 922, 1219, 1223
BssT1I CCWWGG 1 cut(s) 260
Bst2UI CCWGG 4 cut(s) 64, 267, 797, 938
Bst4CI ACNGT 1 cut(s) 207
Bst6I CTCTTC 3 cut(s) 60, 345, 528
BstAPI GCANNNNNTGC 1 cut(s) 1178
BstC8I GCNNGC 2 cut(s) 167, 933
BstDEI CTNAG 6 cut(s) 213, 305, 594, 956, 1107, 1200
BstF5I GGATG 4 cut(s) 163, 985, 1027, 1183
BstHHI GCGC 1 cut(s) 6
BstKTI GATC 8 cut(s) 150, 316, 400, 787, 819, 925, 1222, 1226
BstMAI GTCTC 1 cut(s) 1157
BstMBI GATC 8 cut(s) 147, 313, 397, 784, 816, 922, 1219, 1223
BstMWI GCNNNNNNNGC 4 cut(s) 192, 218, 864, 1178
BstNI CCWGG 4 cut(s) 64, 267, 797, 938
BstNSI RCATGY 2 cut(s) 169, 1041
BstSCI CCNGG 4 cut(s) 62, 265, 795, 936
BstSLI GKGCMC 1 cut(s) 937
BstV1I GCAGC 2 cut(s) 16, 699
BstV2I GAAGAC 1 cut(s) 477
BstX2I RGATCY 2 cut(s) 784, 816
BstYI RGATCY 2 cut(s) 784, 816
Bsu15I ATCGAT 1 cut(s) 1222
BsuI GTATCC 1 cut(s) 1110
BsuRI GGCC 3 cut(s) 265, 867, 1153
BsuTUI ATCGAT 1 cut(s) 1222
BtsCI GGATG 4 cut(s) 163, 985, 1027, 1183
BtsIMutI CAGTG 3 cut(s) 313, 894, 1069
BveI ACCTGC 1 cut(s) 895
Cac8I GCNNGC 2 cut(s) 167, 933
CfoI GCGC 1 cut(s) 6
ClaI ATCGAT 1 cut(s) 1222
Csp6I GTAC 4 cut(s) 540, 660, 1068, 1094
CviAII CATG 4 cut(s) 151, 166, 551, 1038
CviQI GTAC 4 cut(s) 540, 660, 1068, 1094
DdeI CTNAG 6 cut(s) 213, 305, 594, 956, 1107, 1200
DpnI GATC 8 cut(s) 149, 315, 399, 786, 818, 924, 1221, 1225
DpnII GATC 8 cut(s) 147, 313, 397, 784, 816, 922, 1219, 1223
EaeI YGGCCR 1 cut(s) 865
Eam1104I CTCTTC 3 cut(s) 60, 345, 528
EarI CTCTTC 3 cut(s) 60, 345, 528
Ecl136II GAGCTC 2 cut(s) 46, 136
Eco130I CCWWGG 1 cut(s) 260
Eco147I AGGCCT 1 cut(s) 265
Eco24I GRGCYC 2 cut(s) 48, 138
Eco31I GGTCTC 1 cut(s) 1157
Eco53kI GAGCTC 2 cut(s) 46, 136
Eco57I CTGAAG 3 cut(s) 175, 471, 758
Eco88I CYCGRG 1 cut(s) 93
EcoICRI GAGCTC 2 cut(s) 46, 136
EcoRII CCWGG 4 cut(s) 62, 265, 795, 936
EcoT14I CCWWGG 1 cut(s) 260
EcoT22I ATGCAT 1 cut(s) 418
EcoT38I GRGCYC 2 cut(s) 48, 138
ErhI CCWWGG 1 cut(s) 260
FaeI CATG 4 cut(s) 154, 169, 554, 1041
FaqI GGGAC 1 cut(s) 1045
FatI CATG 4 cut(s) 150, 165, 550, 1037
FauI CCCGC 3 cut(s) 443, 609, 1083
FbaI TGATCA 1 cut(s) 147
Fnu4HI GCNGC 3 cut(s) 30, 688, 1197
FokI GGATG 4 cut(s) 170, 992, 1034, 1190
FriOI GRGCYC 2 cut(s) 48, 138
Fsp4HI GCNGC 3 cut(s) 30, 688, 1197
FspI TGCGCA 1 cut(s) 5
GlaI GCGC 1 cut(s) 5
GluI GCNGC 3 cut(s) 30, 688, 1197
GsuI CTGGAG 5 cut(s) 46, 422, 765, 918, 959
HaeIII GGCC 3 cut(s) 265, 867, 1153
HapII CCGG 1 cut(s) 1019
HhaI GCGC 1 cut(s) 6
Hin1II CATG 4 cut(s) 154, 169, 554, 1041
Hin6I GCGC 1 cut(s) 4
HinP1I GCGC 1 cut(s) 4
HinfI GANTC 2 cut(s) 106, 1059
HpaII CCGG 1 cut(s) 1019
HphI GGTGA 2 cut(s) 26, 734
Hpy166II GTNNAC 1 cut(s) 542
Hpy188I TCNGA 3 cut(s) 622, 745, 999
Hpy188III TCNNGA 7 cut(s) 17, 215, 401, 527, 782, 1102, 1217
Hpy8I GTNNAC 1 cut(s) 542
HpyAV CCTTC 4 cut(s) 75, 155, 199, 263
HpyCH4III ACNGT 1 cut(s) 207
HpyCH4IV ACGT 1 cut(s) 876
HpyF10VI GCNNNNNNNGC 4 cut(s) 192, 218, 864, 1178
HpyF3I CTNAG 6 cut(s) 213, 305, 594, 956, 1107, 1200
HpySE526I ACGT 1 cut(s) 876
Hsp92II CATG 4 cut(s) 154, 169, 554, 1041
HspAI GCGC 1 cut(s) 4
KpnI GGTACC 2 cut(s) 663, 1097
Ksp22I TGATCA 1 cut(s) 147
Kzo9I GATC 8 cut(s) 147, 313, 397, 784, 816, 922, 1219, 1223
LguI GCTCTTC 1 cut(s) 345
LmnI GCTCC 5 cut(s) 191, 238, 403, 517, 784
Lsp1109I GCAGC 2 cut(s) 16, 699
LweI GCATC 5 cut(s) 425, 763, 939, 1012, 1168
MaeII ACGT 1 cut(s) 876
MaeIII GTNAC 3 cut(s) 500, 722, 1003
MalI GATC 8 cut(s) 149, 315, 399, 786, 818, 924, 1221, 1225
MbiI CCGCTC 1 cut(s) 438
MboI GATC 8 cut(s) 147, 313, 397, 784, 816, 922, 1219, 1223
MboII GAAGA 9 cut(s) 47, 329, 362, 477, 515, 527, 662, 749, 764
MfeI CAATTG 2 cut(s) 222, 447
MflI RGATCY 2 cut(s) 784, 816
MhlI GDGCHC 3 cut(s) 48, 138, 937
MlsI TGGCCA 1 cut(s) 867
MluCI AATT 9 cut(s) 222, 447, 464, 623, 629, 768, 802, 993, 1191
MluNI TGGCCA 1 cut(s) 867
MlyI GAGTC 1 cut(s) 1068
MmeI TCCRAC 1 cut(s) 58
Mox20I TGGCCA 1 cut(s) 867
Mph1103I ATGCAT 1 cut(s) 418
MroXI GAANNNNTTC 3 cut(s) 336, 771, 804
MscI TGGCCA 1 cut(s) 867
MseI TTAA 5 cut(s) 291, 411, 471, 666, 1228
MslI CAYNNNNRTG 3 cut(s) 39, 321, 549
Msp20I TGGCCA 1 cut(s) 867
MspA1I CMGCKG 1 cut(s) 1199
MspI CCGG 1 cut(s) 1019
MspR9I CCNGG 4 cut(s) 64, 267, 797, 938
MunI CAATTG 2 cut(s) 222, 447
MvaI CCWGG 4 cut(s) 64, 267, 797, 938
MwoI GCNNNNNNNGC 4 cut(s) 192, 218, 864, 1178
NdeII GATC 8 cut(s) 147, 313, 397, 784, 816, 922, 1219, 1223
NlaIII CATG 4 cut(s) 154, 169, 554, 1041
NlaIV GGNNCC 7 cut(s) 234, 405, 519, 661, 780, 818, 1095
NmuCI GTSAC 1 cut(s) 722
NsbI TGCGCA 1 cut(s) 5
NsiI ATGCAT 1 cut(s) 418
NspI RCATGY 2 cut(s) 169, 1041
PaeI GCATGC 1 cut(s) 169
PaeR7I CTCGAG 1 cut(s) 93
PceI AGGCCT 1 cut(s) 265
PciSI GCTCTTC 1 cut(s) 345
PdmI GAANNNNTTC 3 cut(s) 336, 771, 804
PfeI GAWTC 1 cut(s) 106
PflMI CCANNNNNTGG 2 cut(s) 266, 1051
PkrI GCNGC 3 cut(s) 31, 689, 1198
PleI GAGTC 1 cut(s) 1067
PpsI GAGTC 1 cut(s) 1067
Psp124BI GAGCTC 2 cut(s) 48, 138
Psp6I CCWGG 4 cut(s) 62, 265, 795, 936
PspGI CCWGG 4 cut(s) 62, 265, 795, 936
PspN4I GGNNCC 7 cut(s) 234, 405, 519, 661, 780, 818, 1095
PspXI VCTCGAGB 1 cut(s) 93
PsuI RGATCY 2 cut(s) 784, 816
RsaI GTAC 4 cut(s) 541, 661, 1069, 1095
RsaNI GTAC 4 cut(s) 540, 660, 1068, 1094
RseI CAYNNNNRTG 3 cut(s) 39, 321, 549
SacI GAGCTC 2 cut(s) 48, 138
SapI GCTCTTC 1 cut(s) 345
SaqAI TTAA 5 cut(s) 291, 411, 471, 666, 1228
SatI GCNGC 3 cut(s) 30, 688, 1197
Sau3AI GATC 8 cut(s) 147, 313, 397, 784, 816, 922, 1219, 1223
SchI GAGTC 1 cut(s) 1068
ScrFI CCNGG 4 cut(s) 64, 267, 797, 938
SduI GDGCHC 3 cut(s) 48, 138, 937
SfaNI GCATC 5 cut(s) 425, 763, 939, 1012, 1168
Sfr274I CTCGAG 1 cut(s) 93
SlaI CTCGAG 1 cut(s) 93
SmiMI CAYNNNNRTG 3 cut(s) 39, 321, 549
SmlI CTYRAG 1 cut(s) 93
SmoI CTYRAG 1 cut(s) 93
SphI GCATGC 1 cut(s) 169
Sse9I AATT 9 cut(s) 222, 447, 464, 623, 629, 768, 802, 993, 1191
SseBI AGGCCT 1 cut(s) 265
SsiI CCGC 7 cut(s) 37, 436, 475, 602, 1090, 1123, 1197
SstI GAGCTC 2 cut(s) 48, 138
StuI AGGCCT 1 cut(s) 265
StyD4I CCNGG 4 cut(s) 62, 265, 795, 936
StyI CCWWGG 1 cut(s) 260
TaaI ACNGT 1 cut(s) 207
TaiI ACGT 1 cut(s) 879
TaqI TCGA 8 cut(s) 94, 138, 286, 396, 427, 528, 1184, 1222
TasI AATT 9 cut(s) 222, 447, 464, 623, 629, 768, 802, 993, 1191
TauI GCSGC 1 cut(s) 1199
TfiI GAWTC 1 cut(s) 106
Tru1I TTAA 5 cut(s) 291, 411, 471, 666, 1228
Tru9I TTAA 5 cut(s) 291, 411, 471, 666, 1228
TscAI CASTG 3 cut(s) 313, 901, 1069
TseFI GTSAC 1 cut(s) 722
TseI GCWGC 2 cut(s) 29, 687
Tsp45I GTSAC 1 cut(s) 722
TspDTI ATGAA 3 cut(s) 174, 315, 1203
TspGWI ACGGA 2 cut(s) 378, 488
TspRI CASTG 3 cut(s) 313, 901, 1069
Van91I CCANNNNNTGG 2 cut(s) 266, 1051
XapI RAATTY 5 cut(s) 623, 629, 768, 802, 993
XceI RCATGY 2 cut(s) 169, 1041
XhoI CTCGAG 1 cut(s) 93
XmnI GAANNNNTTC 3 cut(s) 336, 771, 804
Zsp2I ATGCAT 1 cut(s) 418
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.