Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr15

Orthogroup ID

OG0007521

Physical Location & Seq

Genomic Coordinates Reverse (-)

14685865 .. 14686670

Gene Structure 806 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD15G1185700.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 414 bp

ATGTGGTTACTTTGTGATTTATCAGAAAGTTTTCTCTTTTCTCTGCAGGTATACTTTGAAAAGGTGGAGCCAATAGTTCCATTGATTTTCCAACGAACAAAAGCAACTTGCTTTGCATACGGGCAAACTGCGGGAAGACTTATACTATGCAACCACTGCCTCTTAAAGCATCCCCAAGATATTCTAAGATTAATGCTTGATACATACCGAAACCAAGGCTTTCAGTTATTCGTGAGTTTCTTCAAGATATATAGAGGGAAACTTTTTGACCTCCTAAAAAAGCTTTGCATGAGGGAGGATGGTAAGCAGCAAGTGTGTCTGCAAGAGTACAGGGTTTCAAATGTCGAGATGGTCAGGGAGTTTATTGAGAAAGGAAATTCCACCAGAAGTACTTGGTACAACTGGTGCGAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000226 GO:0000278 GO:0003674 GO:0003774 GO:0003777 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005813 GO:0005815 GO:0005856 GO:0005871 GO:0005875 GO:0005886 GO:0006928 GO:0006996 GO:0007010 GO:0007017 GO:0007018 GO:0007049 GO:0007051 GO:0007052 GO:0008150 GO:0009987 GO:0015630 GO:0016020 GO:0016043 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022402 GO:0032991 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0044422 GO:0044424 GO:0044430 GO:0044446 GO:0044464 GO:0050789 GO:0050794 GO:0065007 GO:0071840 GO:0071944 GO:1902850 GO:1903047 GO:1903338

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Kinesin

Protein Analysis

138

Amino Acids

16.4

Weight (kDa)

8.69

Isoelectric Point (pI)

30.23

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Kinesin	PF00225	16 - 131	1.5e-11	Kinesin motor domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Orthologous Genes (Group: OG0007521)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_6g31460 FvH4_6g31460 FvH4_6g31460
malus_domestica	MD15G1185700.v1.1
pyrus_communis	pycom09g12870
rosa_chinensis	RchiOBHm_Chr2g0085031 RchiOBHm_Chr2g0113281
rosa_laevigata	RLG00000010839 RLG00000019129 RLG00000034360 RLG00000034995
rosa_roxburghii	Rroxscaffold_1G00003470 Rroxscaffold_1G00033120 Rroxscaffold_5G00342210 Rroxscaffold_5G00342360
rosa_rugosa	Rorug04G0188100.1
rosa_samantha	Rh1AG098400 Rh1AG203700 Rh2AG396900 Rh2AG398300 Rh2AG398400 Rh2BG258800 Rh2BG310100 Rh2CG383400 Rh5BG449800

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	37
AccI	GTMKAC	1 cut(s)	51
AciI	CCGC	1 cut(s)	131
AcsI	RAATTY	1 cut(s)	376
AfaI	GTAC	3 cut(s)	329, 391, 398
AgsI	TTSAA	3 cut(s)	59, 244, 339
AluBI	AGCT	1 cut(s)	283
AluI	AGCT	1 cut(s)	283
ApeKI	GCWGC	1 cut(s)	307
ApoI	RAATTY	1 cut(s)	376
AseI	ATTAAT	1 cut(s)	191
Asp700I	GAANNNNTTC	1 cut(s)	30
BbsI	GAAGAC	1 cut(s)	142
BbvI	GCAGC	1 cut(s)	319
BccI	CCATC	2 cut(s)	293, 343
BfmI	CTRYAG	1 cut(s)	44
BfuAI	ACCTGC	1 cut(s)	37
BisI	GCNGC	1 cut(s)	308
BlsI	GCNGC	1 cut(s)	309
BmcAI	AGTACT	1 cut(s)	391
BmiI	GGNNCC	1 cut(s)	69
BmsI	GCATC	1 cut(s)	178
BpiI	GAAGAC	1 cut(s)	142
BsaJI	CCNNGG	1 cut(s)	214
Bse1I	ACTGG	1 cut(s)	407
BseDI	CCNNGG	1 cut(s)	214
BseGI	GGATG	2 cut(s)	169, 304
BseNI	ACTGG	1 cut(s)	407
BseXI	GCAGC	1 cut(s)	319
BspACI	CCGC	1 cut(s)	131
BspLI	GGNNCC	1 cut(s)	69
BspMAI	CTGCAG	1 cut(s)	48
BspMI	ACCTGC	1 cut(s)	37
BsrI	ACTGG	1 cut(s)	407
BssECI	CCNNGG	1 cut(s)	214
BssNAI	GTATAC	1 cut(s)	52
BssT1I	CCWWGG	1 cut(s)	214
Bst1107I	GTATAC	1 cut(s)	52
BstAPI	GCANNNNNTGC	1 cut(s)	156
BstDEI	CTNAG	1 cut(s)	185
BstF5I	GGATG	2 cut(s)	169, 304
BstMWI	GCNNNNNNNGC	1 cut(s)	156
BstSFI	CTRYAG	1 cut(s)	44
BstV1I	GCAGC	1 cut(s)	319
BstV2I	GAAGAC	1 cut(s)	142
BstZ17I	GTATAC	1 cut(s)	52
BtsCI	GGATG	2 cut(s)	169, 304
BtsI	GCAGTG	1 cut(s)	154
BtsIMutI	CAGTG	1 cut(s)	154
BveI	ACCTGC	1 cut(s)	37
Csp6I	GTAC	3 cut(s)	328, 390, 397
CviAII	CATG	1 cut(s)	289
CviJI	RGCY	3 cut(s)	70, 219, 283
CviKI_1	RGCY	3 cut(s)	70, 219, 283
CviQI	GTAC	3 cut(s)	328, 390, 397
DdeI	CTNAG	1 cut(s)	185
Eco130I	CCWWGG	1 cut(s)	214
EcoT14I	CCWWGG	1 cut(s)	214
ErhI	CCWWGG	1 cut(s)	214
FaeI	CATG	1 cut(s)	292
FaiI	YATR	8 cut(s)	52, 118, 143, 148, 205, 250, 252, 290
FatI	CATG	1 cut(s)	288
FauI	CCCGC	1 cut(s)	124
FblI	GTMKAC	1 cut(s)	51
Fnu4HI	GCNGC	1 cut(s)	308
FokI	GGATG	2 cut(s)	156, 311
Fsp4HI	GCNGC	1 cut(s)	308
GluI	GCNGC	1 cut(s)	308
Hin1II	CATG	1 cut(s)	292
HindIII	AAGCTT	1 cut(s)	281
Hpy166II	GTNNAC	1 cut(s)	52
Hpy188I	TCNGA	1 cut(s)	25
Hpy188III	TCNNGA	3 cut(s)	232, 244, 346
Hpy8I	GTNNAC	1 cut(s)	52
HpyCH4V	TGCA	5 cut(s)	46, 116, 150, 288, 322
HpyF10VI	GCNNNNNNNGC	1 cut(s)	156
HpyF3I	CTNAG	1 cut(s)	185
Hsp92II	CATG	1 cut(s)	292
LmnI	GCTCC	1 cut(s)	67
LpnPI	CCDG	5 cut(s)	32, 316, 340, 388, 397
Lsp1109I	GCAGC	1 cut(s)	319
LweI	GCATC	1 cut(s)	178
MaeIII	GTNAC	1 cut(s)	6
MboII	GAAGA	2 cut(s)	147, 232
MluCI	AATT	1 cut(s)	376
MmeI	TCCRAC	1 cut(s)	115
MnlI	CCTC	5 cut(s)	170, 248, 281, 285, 289
MroXI	GAANNNNTTC	1 cut(s)	30
MseI	TTAA	2 cut(s)	164, 191
MwoI	GCNNNNNNNGC	1 cut(s)	156
NlaIII	CATG	1 cut(s)	292
NlaIV	GGNNCC	1 cut(s)	69
PdmI	GAANNNNTTC	1 cut(s)	30
PkrI	GCNGC	1 cut(s)	309
PshBI	ATTAAT	1 cut(s)	191
PspN4I	GGNNCC	1 cut(s)	69
PstI	CTGCAG	1 cut(s)	48
RsaI	GTAC	3 cut(s)	329, 391, 398
RsaNI	GTAC	3 cut(s)	328, 390, 397
SaqAI	TTAA	2 cut(s)	164, 191
SatI	GCNGC	1 cut(s)	308
ScaI	AGTACT	1 cut(s)	391
SetI	ASST	4 cut(s)	51, 66, 273, 285
SfaNI	GCATC	1 cut(s)	178
SfcI	CTRYAG	1 cut(s)	44
Sse9I	AATT	1 cut(s)	376
SsiI	CCGC	1 cut(s)	131
StyI	CCWWGG	1 cut(s)	214
TaqI	TCGA	1 cut(s)	345
TasI	AATT	1 cut(s)	376
TatI	WGTACW	2 cut(s)	327, 389
Tru1I	TTAA	2 cut(s)	164, 191
Tru9I	TTAA	2 cut(s)	164, 191
TscAI	CASTG	1 cut(s)	161
TseI	GCWGC	1 cut(s)	307
TspRI	CASTG	1 cut(s)	161
VspI	ATTAAT	1 cut(s)	191
XapI	RAATTY	1 cut(s)	376
XmiI	GTMKAC	1 cut(s)	51
XmnI	GAANNNNTTC	1 cut(s)	30
ZrmI	AGTACT	1 cut(s)	391

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.