Rh2AG398400
ERF Family

Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2A
OG0007521
Physical Location & Seq
Forward (+)
59471112 .. 59473872
2761 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2AG398400.1

Sequence Viewer

Length: 1266 bp
ATGAAACCATTGCCTCTAAAAGCATCACGGGACATCTTGAGGTTGATGCACCATACTTACCGCAGTCAGGGATTTCAGTTGTTTGTAAGCTTCTTTGAAATATATGGAGGAAAACTTTTTGATCTCCTCAATGAGCGCAAAAAGCTTTGCATGAGAGAAGATGGTAAGCAACAAGTTTGTATTGTGGGTTTGCAAGAATACAGAGTGTCTGATGTAGAGACAATTAAAGAGCTCATTGAGAAAGGAAGTGCCACAAGAAGTACTGGTACCACTGGTGCAAATGAAGAATCCTCTCGTTCACATGCCATACTTCAGCTCGCTATCAAAAGGGCAGTTGATGGCAATGTATCAAAGCCTCCCCGTCTTGTTGGTAAACTCTCCTTTATAGATCTTGCTGGAAGTGAACGTGGTGCAGATACTACAGATAATGACAAACAGACAAGAATGGAAGGTGCTGAAATCAATAAGAGCTTACTTGCACTAAAGGAATGTATTAGAGCTCTTGATAATGACCAGGGTCATATTCCTTTCCGAGGAAGTAAATTGACTGAAGTTCTAAGGGATTCATTTGTTGGTGACTCACGAACTGTGATGATATCATGCATATCACCAAGCTCAGGATCCTGTGAACATACTCTTAACACTTTAAGATATGCAGACAGGGTGAAGAGCCTTTCAAAAGGGAACAATTCAAAGAAGGATATACTAGCTTCAACCTTAAACCTCAAGGAATCAACAAATGTGCCCTTATCATCATTTTTGCCAACTGCCTCTGCCTTTGAGGATGACATGAATGATACATGGCCTGTACAAGTTGAAAAAGAGGAATATGATCAATCAGAAGAGGTCTATGATGATCCTAAAACATCATGGAAGAGAACTGGGAAGCTACAACAGTACAATGTTTCGACTTCAGAGGACAACGTTCGTAAACCCAATGGGCAGTCAAAATGGATGGGCATGCCAAAATCTCATTCAAGGAATTCAAATTCAGACGATGATTTAAATGCCCTGTTACAGGAGGAGGAGGATCTTGTAAATGCTCACCGGAAACAAGTGGAGGATACAATGAATATTGTTAAAGAGGAGATGAATTTGCTGGTAGAAGCAGACCAACCAGGAAATCAGCTGGATGATTATGTTACAAGATTGAATGCCATTCTATCTCAGAAGGCTGCTGGCATCCTGCAATTACAAAATCGTTTAGCTCATTTCCAGAAGCGTTTAAAAGAACATAATGTTCTAGTATCCTCTTCTGGTTACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000070 GO:0000226 GO:0000278 GO:0000280 GO:0000775 GO:0000776 GO:0000819 GO:0002376 GO:0002478 GO:0002495 GO:0002504 GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0003774 GO:0003777 GO:0003824 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0005737 GO:0005829 GO:0005856 GO:0005871 GO:0005874 GO:0005875 GO:0005886 GO:0006810 GO:0006890 GO:0006928 GO:0006996 GO:0007010 GO:0007017 GO:0007018 GO:0007019 GO:0007049 GO:0007059 GO:0007080 GO:0007163 GO:0008017 GO:0008092 GO:0008150 GO:0008283 GO:0008608 GO:0009987 GO:0015630 GO:0015631 GO:0016020 GO:0016043 GO:0016192 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019237 GO:0019882 GO:0019884 GO:0019886 GO:0022402 GO:0022411 GO:0030951 GO:0030952 GO:0031109 GO:0032984 GO:0032991 GO:0035371 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043565 GO:0043624 GO:0043933 GO:0044422 GO:0044424 GO:0044427 GO:0044430 GO:0044444 GO:0044446 GO:0044464 GO:0048002 GO:0048193 GO:0048285 GO:0050000 GO:0050789 GO:0050794 GO:0051010 GO:0051179 GO:0051234 GO:0051261 GO:0051276 GO:0051303 GO:0051310 GO:0051315 GO:0051640 GO:0051641 GO:0051649 GO:0051656 GO:0051983 GO:0065007 GO:0071840 GO:0071944 GO:0097159 GO:0097435 GO:0098687 GO:0098813 GO:0099080 GO:0099081 GO:0099512 GO:0099513 GO:0140014 GO:1901363 GO:1903047 GO:1903338 GO:1990752 GO:1990837
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Kinesin

Protein Analysis

421

Amino Acids

47.3

Weight (kDa)

6.2

Isoelectric Point (pI)

47.87

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Kinesin PF00225 8 - 224 4.2e-72 Kinesin motor domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 266
AccB1I GGYRCC 1 cut(s) 266
AciI CCGC 1 cut(s) 61
AclI AACGTT 1 cut(s) 924
AclWI GGATC 4 cut(s) 615, 628, 851, 1038
AcsI RAATTY 3 cut(s) 982, 988, 1093
AcuI CTGAAG 3 cut(s) 296, 570, 897
AfaI GTAC 4 cut(s) 262, 268, 810, 899
AfiI CCNNNNNNNGG 4 cut(s) 67, 533, 617, 1018
AgsI TTSAA 8 cut(s) 98, 678, 693, 714, 818, 978, 987, 1153
AjnI CCWGG 2 cut(s) 513, 1117
AjuI GAANNNNNNNTTGG 2 cut(s) 958, 990
Alw21I GWGCWC 2 cut(s) 234, 502
Alw26I GTCTC 1 cut(s) 212
AlwI GGATC 4 cut(s) 615, 628, 851, 1038
AoxI GGCC 1 cut(s) 803
ApeKI GCWGC 1 cut(s) 1175
ApoI RAATTY 3 cut(s) 982, 988, 1093
Asp718I GGTACC 1 cut(s) 266
AspLEI GCGC 1 cut(s) 138
AsuHPI GGTGA 4 cut(s) 587, 600, 676, 1037
BaeGI GKGCMC 1 cut(s) 747
BamHI GGATCC 1 cut(s) 620
BanI GGYRCC 1 cut(s) 266
BanII GRGCYC 2 cut(s) 234, 502
BarI GAAGNNNNNNTAC 2 cut(s) 250, 282
Bbv12I GWGCWC 2 cut(s) 234, 502
BbvI GCAGC 1 cut(s) 1162
BccI CCATC 3 cut(s) 155, 332, 949
BciT130I CCWGG 2 cut(s) 515, 1119
BciVI GTATCC 2 cut(s) 1057, 1258
BclI TGATCA 1 cut(s) 832
BcoDI GTCTC 1 cut(s) 212
BfaI CTAG 2 cut(s) 707, 1244
BfmI CTRYAG 1 cut(s) 420
BfuI GTATCC 2 cut(s) 1057, 1258
BglII AGATCT 1 cut(s) 388
BisI GCNGC 1 cut(s) 1176
BlsI GCNGC 1 cut(s) 1177
BmcAI AGTACT 1 cut(s) 262
Bme1390I CCNGG 2 cut(s) 515, 1119
BmiI GGNNCC 2 cut(s) 268, 622
BmrFI CCNGG 2 cut(s) 515, 1119
BmrI ACTGGG 1 cut(s) 891
BmsI GCATC 3 cut(s) 32, 36, 1191
BmuI ACTGGG 1 cut(s) 891
BoxI GACNNNNGTC 1 cut(s) 516
Bpu10I CCTNAGC 1 cut(s) 616
BpuEI CTTGAG 2 cut(s) 58, 710
BsaJI CCNNGG 2 cut(s) 514, 532
BsaWI WCCGGW 1 cut(s) 1047
Bsc4I CCNNNNNNNGG 4 cut(s) 67, 533, 617, 1018
Bse1I ACTGG 3 cut(s) 268, 277, 886
Bse3DI GCAATG 2 cut(s) 8, 349
BseBI CCWGG 2 cut(s) 515, 1119
BseDI CCNNGG 2 cut(s) 514, 532
BseGI GGATG 4 cut(s) 790, 960, 1138, 1182
BseLI CCNNNNNNNGG 4 cut(s) 67, 533, 617, 1018
BseMI GCAATG 2 cut(s) 8, 349
BseMII CTCAG 2 cut(s) 630, 1181
BseNI ACTGG 3 cut(s) 268, 277, 886
BseRI GAGGAG 4 cut(s) 116, 1037, 1040, 1100
BseSI GKGCMC 1 cut(s) 747
BseXI GCAGC 1 cut(s) 1162
BsgI GTGCAG 1 cut(s) 432
BshFI GGCC 1 cut(s) 805
BshNI GGYRCC 1 cut(s) 266
BsiHKAI GWGCWC 2 cut(s) 234, 502
BsiSI CCGG 1 cut(s) 1048
BslFI GGGAC 1 cut(s) 44
BslI CCNNNNNNNGG 4 cut(s) 67, 533, 617, 1018
BsmAI GTCTC 1 cut(s) 212
BsmFI GGGAC 1 cut(s) 44
BsmI GAATGC 1 cut(s) 1159
BsnI GGCC 1 cut(s) 805
Bsp1286I GDGCHC 3 cut(s) 234, 502, 747
Bsp1407I TGTACA 1 cut(s) 808
Bsp143I GATC 6 cut(s) 121, 388, 620, 832, 856, 1030
BspACI CCGC 1 cut(s) 61
BspANI GGCC 1 cut(s) 805
BspCNI CTCAG 2 cut(s) 629, 1180
BspLI GGNNCC 2 cut(s) 268, 622
BspPI GGATC 4 cut(s) 615, 628, 851, 1038
BspQI GCTCTTC 1 cut(s) 662
BspT107I GGYRCC 1 cut(s) 266
BsrDI GCAATG 2 cut(s) 8, 349
BsrGI TGTACA 1 cut(s) 808
BsrI ACTGG 3 cut(s) 268, 277, 886
BssECI CCNNGG 2 cut(s) 514, 532
BssMI GATC 6 cut(s) 121, 388, 620, 832, 856, 1030
Bst2UI CCWGG 2 cut(s) 515, 1119
Bst4CI ACNGT 2 cut(s) 589, 897
Bst6I CTCTTC 4 cut(s) 662, 837, 869, 1258
BstAUI TGTACA 1 cut(s) 808
BstC8I GCNNGC 3 cut(s) 318, 962, 1180
BstDEI CTNAG 3 cut(s) 557, 616, 1167
BstENI CCTNNNNNAGG 2 cut(s) 531, 1016
BstF5I GGATG 4 cut(s) 790, 960, 1138, 1182
BstHHI GCGC 1 cut(s) 138
BstKTI GATC 6 cut(s) 124, 391, 623, 835, 859, 1033
BstMAI GTCTC 1 cut(s) 212
BstMBI GATC 6 cut(s) 121, 388, 620, 832, 856, 1030
BstMWI GCNNNNNNNGC 1 cut(s) 142
BstNI CCWGG 2 cut(s) 515, 1119
BstNSI RCATGY 2 cut(s) 305, 964
BstPAI GACNNNNGTC 1 cut(s) 516
BstSCI CCNGG 2 cut(s) 513, 1117
BstSFI CTRYAG 1 cut(s) 420
BstSLI GKGCMC 1 cut(s) 747
BstV1I GCAGC 1 cut(s) 1162
BstX2I RGATCY 3 cut(s) 388, 620, 1030
BstYI RGATCY 3 cut(s) 388, 620, 1030
BsuI GTATCC 2 cut(s) 1057, 1258
BsuRI GGCC 1 cut(s) 805
BtsCI GGATG 4 cut(s) 790, 960, 1138, 1182
BtsIMutI CAGTG 1 cut(s) 270
Cac8I GCNNGC 3 cut(s) 318, 962, 1180
CfoI GCGC 1 cut(s) 138
Csp6I GTAC 4 cut(s) 261, 267, 809, 898
CviAII CATG 7 cut(s) 151, 302, 600, 790, 801, 870, 961
CviQI GTAC 4 cut(s) 261, 267, 809, 898
DdeI CTNAG 3 cut(s) 557, 616, 1167
DpnI GATC 6 cut(s) 123, 390, 622, 834, 858, 1032
DpnII GATC 6 cut(s) 121, 388, 620, 832, 856, 1030
DraI TTTAAA 2 cut(s) 1005, 1227
Eam1104I CTCTTC 4 cut(s) 662, 837, 869, 1258
EarI CTCTTC 4 cut(s) 662, 837, 869, 1258
Ecl136II GAGCTC 2 cut(s) 232, 500
Eco24I GRGCYC 2 cut(s) 234, 502
Eco32I GATATC 1 cut(s) 597
Eco53kI GAGCTC 2 cut(s) 232, 500
Eco57I CTGAAG 3 cut(s) 296, 570, 897
EcoICRI GAGCTC 2 cut(s) 232, 500
EcoNI CCTNNNNNAGG 2 cut(s) 531, 1016
EcoRI GAATTC 1 cut(s) 982
EcoRII CCWGG 2 cut(s) 513, 1117
EcoRV GATATC 1 cut(s) 597
EcoT22I ATGCAT 1 cut(s) 605
EcoT38I GRGCYC 2 cut(s) 234, 502
FaeI CATG 7 cut(s) 154, 305, 603, 793, 804, 873, 964
FaqI GGGAC 1 cut(s) 44
FatI CATG 7 cut(s) 150, 301, 599, 789, 800, 869, 960
FbaI TGATCA 1 cut(s) 832
Fnu4HI GCNGC 1 cut(s) 1176
FokI GGATG 4 cut(s) 797, 967, 1145, 1169
FriOI GRGCYC 2 cut(s) 234, 502
Fsp4HI GCNGC 1 cut(s) 1176
FspBI CTAG 2 cut(s) 707, 1244
GlaI GCGC 1 cut(s) 137
GluI GCNGC 1 cut(s) 1176
HaeIII GGCC 1 cut(s) 805
HapII CCGG 1 cut(s) 1048
HhaI GCGC 1 cut(s) 138
Hin1II CATG 7 cut(s) 154, 305, 603, 793, 804, 873, 964
Hin6I GCGC 1 cut(s) 136
HinP1I GCGC 1 cut(s) 136
HindIII AAGCTT 2 cut(s) 88, 143
HinfI GANTC 4 cut(s) 287, 563, 578, 731
HpaII CCGG 1 cut(s) 1048
HphI GGTGA 4 cut(s) 587, 600, 676, 1037
Hpy166II GTNNAC 5 cut(s) 299, 374, 404, 629, 932
Hpy188I TCNGA 6 cut(s) 211, 533, 841, 916, 994, 1170
Hpy188III TCNNGA 5 cut(s) 37, 503, 582, 618, 1216
Hpy8I GTNNAC 5 cut(s) 299, 374, 404, 629, 932
HpyAV CCTTC 3 cut(s) 443, 691, 1165
HpyCH4III ACNGT 2 cut(s) 589, 897
HpyCH4IV ACGT 2 cut(s) 406, 924
HpyCH4V TGCA 9 cut(s) 49, 150, 193, 278, 413, 479, 603, 656, 1189
HpyF10VI GCNNNNNNNGC 1 cut(s) 142
HpyF3I CTNAG 3 cut(s) 557, 616, 1167
HpySE526I ACGT 2 cut(s) 406, 924
Hsp92II CATG 7 cut(s) 154, 305, 603, 793, 804, 873, 964
HspAI GCGC 1 cut(s) 136
KpnI GGTACC 1 cut(s) 270
Ksp22I TGATCA 1 cut(s) 832
Kzo9I GATC 6 cut(s) 121, 388, 620, 832, 856, 1030
LguI GCTCTTC 1 cut(s) 662
Lsp1109I GCAGC 1 cut(s) 1162
LweI GCATC 3 cut(s) 32, 36, 1191
MaeI CTAG 2 cut(s) 707, 1244
MaeII ACGT 2 cut(s) 406, 924
MaeIII GTNAC 4 cut(s) 575, 1014, 1141, 1259
MalI GATC 6 cut(s) 123, 390, 622, 834, 858, 1032
MboI GATC 6 cut(s) 121, 388, 620, 832, 856, 1030
MboII GAAGA 6 cut(s) 170, 296, 679, 854, 886, 1245
MflI RGATCY 3 cut(s) 388, 620, 1030
MhlI GDGCHC 3 cut(s) 234, 502, 747
MluCI AATT 7 cut(s) 222, 542, 688, 982, 988, 1093, 1190
MlyI GAGTC 1 cut(s) 572
Mph1103I ATGCAT 1 cut(s) 605
MseI TTAA 7 cut(s) 225, 639, 647, 719, 1004, 1080, 1226
MspA1I CMGCKG 1 cut(s) 1129
MspI CCGG 1 cut(s) 1048
MspR9I CCNGG 2 cut(s) 515, 1119
Mva1269I GAATGC 1 cut(s) 1159
MvaI CCWGG 2 cut(s) 515, 1119
MwoI GCNNNNNNNGC 1 cut(s) 142
NdeII GATC 6 cut(s) 121, 388, 620, 832, 856, 1030
NlaIII CATG 7 cut(s) 154, 305, 603, 793, 804, 873, 964
NlaIV GGNNCC 2 cut(s) 268, 622
NmuCI GTSAC 1 cut(s) 575
NsiI ATGCAT 1 cut(s) 605
NspI RCATGY 2 cut(s) 305, 964
PaeI GCATGC 1 cut(s) 964
PciSI GCTCTTC 1 cut(s) 662
PctI GAATGC 1 cut(s) 1159
PfeI GAWTC 3 cut(s) 287, 563, 731
PkrI GCNGC 1 cut(s) 1177
PleI GAGTC 1 cut(s) 572
PpsI GAGTC 1 cut(s) 572
PshAI GACNNNNGTC 1 cut(s) 516
Psp124BI GAGCTC 2 cut(s) 234, 502
Psp1406I AACGTT 1 cut(s) 924
Psp6I CCWGG 2 cut(s) 513, 1117
PspGI CCWGG 2 cut(s) 513, 1117
PspN4I GGNNCC 2 cut(s) 268, 622
PsuI RGATCY 3 cut(s) 388, 620, 1030
PvuII CAGCTG 1 cut(s) 1129
RsaI GTAC 4 cut(s) 262, 268, 810, 899
RsaNI GTAC 4 cut(s) 261, 267, 809, 898
SacI GAGCTC 2 cut(s) 234, 502
SapI GCTCTTC 1 cut(s) 662
SaqAI TTAA 7 cut(s) 225, 639, 647, 719, 1004, 1080, 1226
SatI GCNGC 1 cut(s) 1176
Sau3AI GATC 6 cut(s) 121, 388, 620, 832, 856, 1030
ScaI AGTACT 1 cut(s) 262
SchI GAGTC 1 cut(s) 572
ScrFI CCNGG 2 cut(s) 515, 1119
SduI GDGCHC 3 cut(s) 234, 502, 747
SfaNI GCATC 3 cut(s) 32, 36, 1191
SfcI CTRYAG 1 cut(s) 420
SmiI ATTTAAAT 1 cut(s) 1005
SmlI CTYRAG 2 cut(s) 37, 725
SmoI CTYRAG 2 cut(s) 37, 725
SphI GCATGC 1 cut(s) 964
Sse9I AATT 7 cut(s) 222, 542, 688, 982, 988, 1093, 1190
SsiI CCGC 1 cut(s) 61
SspI AATATT 1 cut(s) 1075
SspMI CTAG 2 cut(s) 707, 1244
SstI GAGCTC 2 cut(s) 234, 502
StyD4I CCNGG 2 cut(s) 513, 1117
SwaI ATTTAAAT 1 cut(s) 1005
TaaI ACNGT 2 cut(s) 589, 897
TaiI ACGT 2 cut(s) 409, 927
TaqI TCGA 1 cut(s) 908
TasI AATT 7 cut(s) 222, 542, 688, 982, 988, 1093, 1190
TatI WGTACW 3 cut(s) 260, 808, 897
TfiI GAWTC 3 cut(s) 287, 563, 731
Tru1I TTAA 7 cut(s) 225, 639, 647, 719, 1004, 1080, 1226
Tru9I TTAA 7 cut(s) 225, 639, 647, 719, 1004, 1080, 1226
TscAI CASTG 1 cut(s) 277
TseFI GTSAC 1 cut(s) 575
TseI GCWGC 1 cut(s) 1175
Tsp45I GTSAC 1 cut(s) 575
TspDTI ATGAA 6 cut(s) 17, 297, 555, 806, 1085, 1106
TspRI CASTG 1 cut(s) 277
XagI CCTNNNNNAGG 2 cut(s) 531, 1016
XapI RAATTY 3 cut(s) 982, 988, 1093
XceI RCATGY 2 cut(s) 305, 964
XspI CTAG 2 cut(s) 707, 1244
ZrmI AGTACT 1 cut(s) 262
Zsp2I ATGCAT 1 cut(s) 605
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.