RLG00000010839
ERF Family

Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr3
Physical Location & Seq
Forward (+)
4705530 .. 4715375
9846 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000010839

Sequence Viewer

Length: 1548 bp
ATGGAACCTCGTCGCCCAGGCCCAGTTCGCCAATGTCAAGGTTGCGGTGAAAATAGTGATCACGGCGGTCCACTCAATAGGTGGCCCAAGGAAGATGGTGGCGGTCGCCAGGCACTTGCCGCAAGCCTCGCGGCCAAGATTAAGCGAGATGCTTGGACACGGGTCCAAGGCGTCTCCTCTGGCCGCGCTCTCCTTGGCCGCCGCTCTGGTGGCACATCTGACTTCTCTCTCCATGGCCGCCGCCGTGGCGAGGTGTCCTCTTATGGGCGTGCGGCAAGTGCCTGGCAGCCGCCACCATCTTCCTTGGGCCACCTATTGAGTGGACCGCCGAGGAGATTCTTTCAACCCCTTGGGATAAAGAAAACGATAGGTGAAGCGATTGCTACTAATCGGGGCGGCGCGGCCGTGGCTCAGAGAAGCCGCCGCCGTGGCAAGGCTGTCCTGGCGTCTGGCGACACCACCTCTGGTGGTAACTCCTCGGATCGTCAAAGTGCTCGTCAGAGTGATGAAGAAAACACTACGGTGGTGGTTGTTCAAGCTGTCCCTGAGCCACTGCAGGGGATTCCAGAGGTTGTTCCGGCTGTTCATCAACCAATTGCACCAGATCATGCATCAATTGATATGGTCGCAATTGAAGACATTGAAGATGAAGAAGGGATCCACAGCTCAGGGAGTCGAAAAACTTTTACCATGAAACCATTGCCTCTAAAAGCATCACGGGACATCTTGAGGTTGATGCACCATACTTACCGCAGTCAGGGATTTCAGTTGTTTGTAAGCTTCTTGGAAATATATGGAGGAAAACTTTTTGATCTCCTCAATGAGCGCAAAAAGCTTTGCATGAGAGAAGATGGTAAGCAACAAGTTTGTATTGTGGGTTTGCAAGAATATAGTGTGTCTGATGCAGAGACAATTAAAGAGCTTATTGAGAAAGGAAGTGCCACAATAAGTACTGGTACCACTGGTGCAAATGAAGAATCCTCTCGCTCACATGCCGTACTTCAGCTTGCTATCAAGAGGGTAGTTGATGGCAATGTATCAAAGCCTCCCCGTCTTGTTGGTAAACTCTCCTTTATAGATCTTGCTGGAAGTGAATGTGGTGCAGATACTACAGATAATGACAAACAGACAAGAAAAATGCGGGGATGTTTATGCTTTGCTTTTGCATCTACTGGCGGTTGGAAGTGGCCTTTTGATTGGTGGATTAGAGGCTTGAGAAGAGGAAGATATATGCATGTTTGGCCAGCCTTCGTTGGATATAGTGTGCTAGGGTATCCTCATATTATAATACAGGGCTGGACTTTTAGTATGTGTTTGTCGCTTGGAGCGTTTTATGCTTGTCTTATTAGAGAGGAGGATGAGAGGCTATCCGCTATCCTTATTGGATATGGACGACATGAAGACCACAGTTTTCTTCTTGAGTCACTGCATCAAATCGGAGAACCGTTCAATAACCACTCCATCAGCATTGGCAGGGTATTTGATCCGGAGGATGATGCCGCAAAAGACAGTGGCTATGGCATTGCACTCAGTGCAAAGAAGGATTAG

Protein Analysis

516

Amino Acids

56.32

Weight (kDa)

8.95

Isoelectric Point (pI)

55.49

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Kinesin PF00225 223 - 378 3.8e-34 Kinesin motor domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1286
Acc65I GGTACC 1 cut(s) 956
AccB1I GGYRCC 1 cut(s) 956
AccBSI CCGCTC 1 cut(s) 204
AccII CGCG 3 cut(s) 131, 186, 401
AccIII TCCGGA 1 cut(s) 1486
AclWI GGATC 4 cut(s) 489, 652, 665, 1478
AcoI YGGCCR 6 cut(s) 132, 181, 196, 235, 402, 1241
AcuI CTGAAG 1 cut(s) 986
AcyI GRCGYC 2 cut(s) 171, 446
AdeI CACNNNGTG 1 cut(s) 1532
AfaI GTAC 3 cut(s) 952, 958, 999
AfiI CCNNNNNNNGG 5 cut(s) 250, 264, 433, 557, 757
AgsI TTSAA 5 cut(s) 344, 536, 635, 644, 1450
AjnI CCWGG 4 cut(s) 16, 108, 281, 441
AleI CACNNNNGTG 1 cut(s) 521
AluBI AGCT 6 cut(s) 539, 666, 780, 835, 922, 1006
AluI AGCT 6 cut(s) 539, 666, 780, 835, 922, 1006
Alw21I GWGCWC 1 cut(s) 496
Alw26I GTCTC 2 cut(s) 178, 902
AlwI GGATC 4 cut(s) 489, 652, 665, 1478
Aor13HI TCCGGA 1 cut(s) 1486
ApeKI GCWGC 1 cut(s) 286
ArsI GACNNNNNNTTYG 2 cut(s) 481, 513
Asp718I GGTACC 1 cut(s) 956
AspLEI GCGC 3 cut(s) 188, 401, 828
AspS9I GGNCC 6 cut(s) 20, 68, 84, 163, 307, 323
AsuHPI GGTGA 2 cut(s) 59, 383
AvaII GGWCC 3 cut(s) 68, 163, 323
BalI TGGCCA 1 cut(s) 1243
BamHI GGATCC 1 cut(s) 657
BanI GGYRCC 1 cut(s) 956
BbsI GAAGAC 2 cut(s) 642, 1407
Bbv12I GWGCWC 1 cut(s) 496
BbvI GCAGC 1 cut(s) 298
BccI CCATC 5 cut(s) 89, 304, 845, 1022, 1469
BceAI ACGGC 5 cut(s) 79, 228, 389, 411, 980
BciT130I CCWGG 4 cut(s) 18, 110, 283, 443
BciVI GTATCC 1 cut(s) 1284
BclI TGATCA 1 cut(s) 58
BcoDI GTCTC 2 cut(s) 178, 902
BfaI CTAG 1 cut(s) 1268
BfmI CTRYAG 2 cut(s) 554, 1110
BfuI GTATCC 1 cut(s) 1284
BglI GCCNNNNNGGC 2 cut(s) 246, 429
BglII AGATCT 1 cut(s) 1078
BmcAI AGTACT 1 cut(s) 952
Bme1390I CCNGG 4 cut(s) 18, 110, 283, 443
Bme18I GGWCC 3 cut(s) 68, 163, 323
BmgT120I GGNCC 6 cut(s) 20, 68, 84, 163, 307, 323
BmiI GGNNCC 4 cut(s) 6, 164, 659, 958
BmrFI CCNGG 4 cut(s) 18, 110, 283, 443
BmrI ACTGGG 1 cut(s) 17
BmsI GCATC 8 cut(s) 139, 620, 722, 726, 892, 1175, 1438, 1486
BmuI ACTGGG 1 cut(s) 17
BoxI GACNNNNGTC 1 cut(s) 161
BpiI GAAGAC 2 cut(s) 642, 1407
BplI GAGNNNNNCTC 2 cut(s) 242, 274
Bpu10I CCTNAGC 2 cut(s) 546, 667
BpuEI CTTGAG 3 cut(s) 748, 1234, 1439
BsaHI GRCGYC 2 cut(s) 171, 446
BsaWI WCCGGW 1 cut(s) 1486
Bsc4I CCNNNNNNNGG 5 cut(s) 250, 264, 433, 557, 757
Bse1I ACTGG 4 cut(s) 23, 958, 967, 1177
Bse3DI GCAATG 3 cut(s) 698, 1039, 1521
BseAI TCCGGA 1 cut(s) 1486
BseBI CCWGG 4 cut(s) 18, 110, 283, 443
BseGI GGATG 3 cut(s) 1151, 1363, 1498
BseLI CCNNNNNNNGG 5 cut(s) 250, 264, 433, 557, 757
BseMI GCAATG 3 cut(s) 698, 1039, 1521
BseMII CTCAG 4 cut(s) 425, 537, 681, 1543
BseNI ACTGG 4 cut(s) 23, 958, 967, 1177
BseRI GAGGAG 5 cut(s) 166, 346, 466, 806, 1367
BseX3I CGGCCG 1 cut(s) 402
BseXI GCAGC 1 cut(s) 298
BsgI GTGCAG 1 cut(s) 1122
Bsh1236I CGCG 3 cut(s) 131, 186, 401
Bsh1285I CGRYCG 2 cut(s) 106, 405
BshNI GGYRCC 1 cut(s) 956
BsiEI CGRYCG 2 cut(s) 106, 405
BsiHKAI GWGCWC 1 cut(s) 496
BsiSI CCGG 2 cut(s) 578, 1487
BslFI GGGAC 2 cut(s) 527, 734
BslI CCNNNNNNNGG 5 cut(s) 250, 264, 433, 557, 757
BsmAI GTCTC 2 cut(s) 178, 902
BsmBI CGTCTC 1 cut(s) 178
BsmFI GGGAC 2 cut(s) 527, 734
Bsp1286I GDGCHC 1 cut(s) 496
Bsp13I TCCGGA 1 cut(s) 1486
Bsp143I GATC 7 cut(s) 58, 481, 604, 657, 811, 1078, 1483
Bsp19I CCATGG 1 cut(s) 232
BspCNI CTCAG 4 cut(s) 424, 538, 680, 1542
BspEI TCCGGA 1 cut(s) 1486
BspFNI CGCG 3 cut(s) 131, 186, 401
BspLI GGNNCC 4 cut(s) 6, 164, 659, 958
BspMAI CTGCAG 1 cut(s) 558
BspPI GGATC 4 cut(s) 489, 652, 665, 1478
BspT107I GGYRCC 1 cut(s) 956
BsrBI CCGCTC 1 cut(s) 204
BsrDI GCAATG 3 cut(s) 698, 1039, 1521
BsrI ACTGG 4 cut(s) 23, 958, 967, 1177
BssMI GATC 7 cut(s) 58, 481, 604, 657, 811, 1078, 1483
BssNI GRCGYC 2 cut(s) 171, 446
BssT1I CCWWGG 6 cut(s) 87, 166, 193, 232, 303, 349
Bst2UI CCWGG 4 cut(s) 18, 110, 283, 443
Bst4CI ACNGT 4 cut(s) 523, 1409, 1446, 1511
Bst6I CTCTTC 1 cut(s) 1213
BstACI GRCGYC 2 cut(s) 171, 446
BstAPI GCANNNNNTGC 1 cut(s) 1532
BstC8I GCNNGC 4 cut(s) 124, 270, 1008, 1245
BstDEI CTNAG 4 cut(s) 411, 546, 667, 1529
BstDSI CCRYGG 4 cut(s) 232, 244, 405, 427
BstF5I GGATG 3 cut(s) 1151, 1363, 1498
BstFNI CGCG 3 cut(s) 131, 186, 401
BstHHI GCGC 3 cut(s) 188, 401, 828
BstKTI GATC 7 cut(s) 61, 484, 607, 660, 814, 1081, 1486
BstMAI GTCTC 2 cut(s) 178, 902
BstMBI GATC 7 cut(s) 58, 481, 604, 657, 811, 1078, 1483
BstMCI CGRYCG 2 cut(s) 106, 405
BstNI CCWGG 4 cut(s) 18, 110, 283, 443
BstNSI RCATGY 2 cut(s) 995, 1238
BstPAI GACNNNNGTC 1 cut(s) 161
BstSCI CCNGG 4 cut(s) 16, 108, 281, 441
BstSFI CTRYAG 2 cut(s) 554, 1110
BstUI CGCG 3 cut(s) 131, 186, 401
BstV1I GCAGC 1 cut(s) 298
BstV2I GAAGAC 2 cut(s) 642, 1407
BstX2I RGATCY 2 cut(s) 657, 1078
BstYI RGATCY 2 cut(s) 657, 1078
BstZI CGGCCG 1 cut(s) 402
BsuI GTATCC 1 cut(s) 1284
BtgI CCRYGG 4 cut(s) 232, 244, 405, 427
BtsCI GGATG 3 cut(s) 1151, 1363, 1498
BtsI GCAGTG 2 cut(s) 551, 1424
BtsIMutI CAGTG 5 cut(s) 551, 960, 1424, 1516, 1537
Cac8I GCNNGC 4 cut(s) 124, 270, 1008, 1245
CfoI GCGC 3 cut(s) 188, 401, 828
Cfr13I GGNCC 6 cut(s) 20, 68, 84, 163, 307, 323
CseI GACGC 2 cut(s) 160, 435
Csp6I GTAC 3 cut(s) 951, 957, 998
CviAII CATG 7 cut(s) 233, 608, 691, 841, 992, 1235, 1397
CviQI GTAC 3 cut(s) 951, 957, 998
DdeI CTNAG 4 cut(s) 411, 546, 667, 1529
DpnI GATC 7 cut(s) 60, 483, 606, 659, 813, 1080, 1485
DpnII GATC 7 cut(s) 58, 481, 604, 657, 811, 1078, 1483
DraIII CACNNNGTG 1 cut(s) 1532
EaeI YGGCCR 6 cut(s) 132, 181, 196, 235, 402, 1241
EagI CGGCCG 1 cut(s) 402
Eam1104I CTCTTC 1 cut(s) 1213
EarI CTCTTC 1 cut(s) 1213
EclXI CGGCCG 1 cut(s) 402
Eco130I CCWWGG 6 cut(s) 87, 166, 193, 232, 303, 349
Eco47I GGWCC 3 cut(s) 68, 163, 323
Eco52I CGGCCG 1 cut(s) 402
Eco57I CTGAAG 1 cut(s) 986
EcoRII CCWGG 4 cut(s) 16, 108, 281, 441
EcoT14I CCWWGG 6 cut(s) 87, 166, 193, 232, 303, 349
EcoT22I ATGCAT 2 cut(s) 613, 1236
ErhI CCWWGG 6 cut(s) 87, 166, 193, 232, 303, 349
Esp3I CGTCTC 1 cut(s) 178
FaeI CATG 7 cut(s) 236, 611, 694, 844, 995, 1238, 1400
FaqI GGGAC 2 cut(s) 527, 734
FatI CATG 7 cut(s) 232, 607, 690, 840, 991, 1234, 1396
FauI CCCGC 1 cut(s) 1134
FbaI TGATCA 1 cut(s) 58
FokI GGATG 3 cut(s) 1158, 1370, 1505
FspBI CTAG 1 cut(s) 1268
GlaI GCGC 3 cut(s) 187, 400, 827
HapII CCGG 2 cut(s) 578, 1487
HgaI GACGC 2 cut(s) 160, 435
HhaI GCGC 3 cut(s) 188, 401, 828
Hin1I GRCGYC 2 cut(s) 171, 446
Hin1II CATG 7 cut(s) 236, 611, 694, 844, 995, 1238, 1400
Hin6I GCGC 3 cut(s) 186, 399, 826
HinP1I GCGC 3 cut(s) 186, 399, 826
HindIII AAGCTT 2 cut(s) 778, 833
HinfI GANTC 5 cut(s) 336, 562, 673, 977, 1421
HpaII CCGG 2 cut(s) 578, 1487
HphI GGTGA 2 cut(s) 59, 383
Hpy166II GTNNAC 3 cut(s) 71, 323, 1064
Hpy188I TCNGA 6 cut(s) 220, 414, 481, 501, 901, 1439
Hpy188III TCNNGA 5 cut(s) 566, 727, 1015, 1418, 1487
Hpy8I GTNNAC 3 cut(s) 71, 323, 1064
Hpy99I CGWCG 1 cut(s) 15
HpyAV CCTTC 3 cut(s) 647, 1258, 1534
HpyCH4III ACNGT 4 cut(s) 523, 1409, 1446, 1511
HpyF3I CTNAG 4 cut(s) 411, 546, 667, 1529
Hsp92I GRCGYC 2 cut(s) 171, 446
Hsp92II CATG 7 cut(s) 236, 611, 694, 844, 995, 1238, 1400
HspAI GCGC 3 cut(s) 186, 399, 826
Kpn2I TCCGGA 1 cut(s) 1486
KpnI GGTACC 1 cut(s) 960
Ksp22I TGATCA 1 cut(s) 58
Kzo9I GATC 7 cut(s) 58, 481, 604, 657, 811, 1078, 1483
LmnI GCTCC 1 cut(s) 1325
Lsp1109I GCAGC 1 cut(s) 298
LweI GCATC 8 cut(s) 139, 620, 722, 726, 892, 1175, 1438, 1486
MaeI CTAG 1 cut(s) 1268
MaeIII GTNAC 2 cut(s) 470, 1422
MalI GATC 7 cut(s) 60, 483, 606, 659, 813, 1080, 1485
MbiI CCGCTC 1 cut(s) 204
MboI GATC 7 cut(s) 58, 481, 604, 657, 811, 1078, 1483
MfeI CAATTG 3 cut(s) 594, 615, 630
MflI RGATCY 2 cut(s) 657, 1078
MhlI GDGCHC 1 cut(s) 496
MlsI TGGCCA 1 cut(s) 1243
MluCI AATT 4 cut(s) 594, 615, 630, 912
MluNI TGGCCA 1 cut(s) 1243
MlyI GAGTC 2 cut(s) 682, 1430
MmeI TCCRAC 2 cut(s) 1160, 1234
Mox20I TGGCCA 1 cut(s) 1243
Mph1103I ATGCAT 2 cut(s) 613, 1236
MroI TCCGGA 1 cut(s) 1486
MscI TGGCCA 1 cut(s) 1243
MseI TTAA 2 cut(s) 141, 915
MslI CAYNNNNRTG 1 cut(s) 521
Msp20I TGGCCA 1 cut(s) 1243
MspI CCGG 2 cut(s) 578, 1487
MspR9I CCNGG 4 cut(s) 18, 110, 283, 443
MunI CAATTG 3 cut(s) 594, 615, 630
MvaI CCWGG 4 cut(s) 18, 110, 283, 443
MvnI CGCG 3 cut(s) 131, 186, 401
NcoI CCATGG 1 cut(s) 232
NdeII GATC 7 cut(s) 58, 481, 604, 657, 811, 1078, 1483
NlaIII CATG 7 cut(s) 236, 611, 694, 844, 995, 1238, 1400
NlaIV GGNNCC 4 cut(s) 6, 164, 659, 958
NmeAIII GCCGAG 1 cut(s) 354
NmuCI GTSAC 1 cut(s) 1422
NsiI ATGCAT 2 cut(s) 613, 1236
NspI RCATGY 2 cut(s) 995, 1238
OliI CACNNNNGTG 1 cut(s) 521
PcsI WCGNNNNNNNCGW 1 cut(s) 1325
PfeI GAWTC 3 cut(s) 336, 562, 977
PleI GAGTC 2 cut(s) 681, 1429
PpsI GAGTC 2 cut(s) 681, 1429
PshAI GACNNNNGTC 1 cut(s) 161
PsiI TTATAA 1 cut(s) 1286
Psp6I CCWGG 4 cut(s) 16, 108, 281, 441
PspGI CCWGG 4 cut(s) 16, 108, 281, 441
PspN4I GGNNCC 4 cut(s) 6, 164, 659, 958
PspPI GGNCC 6 cut(s) 20, 68, 84, 163, 307, 323
PstI CTGCAG 1 cut(s) 558
PsuI RGATCY 2 cut(s) 657, 1078
RsaI GTAC 3 cut(s) 952, 958, 999
RsaNI GTAC 3 cut(s) 951, 957, 998
RseI CAYNNNNRTG 1 cut(s) 521
SaqAI TTAA 2 cut(s) 141, 915
Sau3AI GATC 7 cut(s) 58, 481, 604, 657, 811, 1078, 1483
Sau96I GGNCC 6 cut(s) 20, 68, 84, 163, 307, 323
ScaI AGTACT 1 cut(s) 952
SchI GAGTC 2 cut(s) 682, 1430
ScrFI CCNGG 4 cut(s) 18, 110, 283, 443
SduI GDGCHC 1 cut(s) 496
SfaNI GCATC 8 cut(s) 139, 620, 722, 726, 892, 1175, 1438, 1486
SfcI CTRYAG 2 cut(s) 554, 1110
SinI GGWCC 3 cut(s) 68, 163, 323
SmiMI CAYNNNNRTG 1 cut(s) 521
SmlI CTYRAG 3 cut(s) 727, 1213, 1418
SmoI CTYRAG 3 cut(s) 727, 1213, 1418
Sse9I AATT 4 cut(s) 594, 615, 630, 912
SspMI CTAG 1 cut(s) 1268
StyD4I CCNGG 4 cut(s) 16, 108, 281, 441
StyI CCWWGG 6 cut(s) 87, 166, 193, 232, 303, 349
TaaI ACNGT 4 cut(s) 523, 1409, 1446, 1511
TaqI TCGA 1 cut(s) 676
TasI AATT 4 cut(s) 594, 615, 630, 912
TatI WGTACW 1 cut(s) 950
TfiI GAWTC 3 cut(s) 336, 562, 977
Tru1I TTAA 2 cut(s) 141, 915
Tru9I TTAA 2 cut(s) 141, 915
TscAI CASTG 5 cut(s) 558, 967, 1431, 1516, 1537
TseFI GTSAC 1 cut(s) 1422
TseI GCWGC 1 cut(s) 286
Tsp45I GTSAC 1 cut(s) 1422
TspDTI ATGAA 6 cut(s) 522, 575, 663, 707, 987, 1413
TspRI CASTG 5 cut(s) 558, 967, 1431, 1516, 1537
VpaK11BI GGWCC 3 cut(s) 68, 163, 323
XceI RCATGY 2 cut(s) 995, 1238
XcmI CCANNNNNNNNNTGG 2 cut(s) 78, 317
XspI CTAG 1 cut(s) 1268
ZrmI AGTACT 1 cut(s) 952
Zsp2I ATGCAT 2 cut(s) 613, 1236
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.