Rh2CG383400
ERF Family

Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2C
OG0007521
Physical Location & Seq
Forward (+)
52253154 .. 52256381
3228 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2CG383400.1

Sequence Viewer

Length: 432 bp
ATGAACGGGGTAGGGAGGCAGGGGCAGAGATCTGGTGCGCCGCACCACCAGCGGCAATACTCGGATAACTTCTTGGAGACTTCGTCCAATGGGAGATGGCTTCAGTCTGCTGGTCTTCAACATCTTCACTCCAACTCATCAATCCCTCCTCCTTCTCAGTCTAATCCAGTTGGGTTATCTTACCATACAAACGCTAAGTGGTTCTTGAGGACACCTCCTGATGGACCTATTCTCGGAGTATATTTTTCTCTGCTAAGTAGAAATTCAAGGAGTGGAAAAACTTATACCATGAAACCATTGCCTCTAAAAGCATCACGGGACATCTTGAGGTTGATGCACCATACTTACCGCAGTCAGGGATTTCAGTTGTTTGTAAGCTTCTTTGAAATATATGGAGGAAAACTTTTTGATCTCCTCAATGAGCGCAAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000070 GO:0000226 GO:0000278 GO:0000280 GO:0000775 GO:0000776 GO:0000819 GO:0002376 GO:0002478 GO:0002495 GO:0002504 GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0003774 GO:0003777 GO:0003824 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0005737 GO:0005829 GO:0005856 GO:0005871 GO:0005874 GO:0005875 GO:0005886 GO:0006810 GO:0006890 GO:0006928 GO:0006996 GO:0007010 GO:0007017 GO:0007018 GO:0007019 GO:0007049 GO:0007059 GO:0007080 GO:0007163 GO:0008017 GO:0008092 GO:0008150 GO:0008283 GO:0008608 GO:0009987 GO:0015630 GO:0015631 GO:0016020 GO:0016043 GO:0016192 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019237 GO:0019882 GO:0019884 GO:0019886 GO:0022402 GO:0022411 GO:0030951 GO:0030952 GO:0031109 GO:0032984 GO:0032991 GO:0035371 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043565 GO:0043624 GO:0043933 GO:0044422 GO:0044424 GO:0044427 GO:0044430 GO:0044444 GO:0044446 GO:0044464 GO:0048002 GO:0048193 GO:0048285 GO:0050000 GO:0050789 GO:0050794 GO:0051010 GO:0051179 GO:0051234 GO:0051261 GO:0051276 GO:0051303 GO:0051310 GO:0051315 GO:0051640 GO:0051641 GO:0051649 GO:0051656 GO:0051983 GO:0065007 GO:0071840 GO:0071944 GO:0097159 GO:0097435 GO:0098687 GO:0098813 GO:0099080 GO:0099081 GO:0099512 GO:0099513 GO:0140014 GO:1901363 GO:1903047 GO:1903338 GO:1990752 GO:1990837
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Kinesin

Protein Analysis

143

Amino Acids

16.25

Weight (kDa)

10.42

Isoelectric Point (pI)

56.17

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Kinesin PF00225 90 - 142 3.3e-07 Kinesin motor domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 3 cut(s) 41, 52, 349
AcsI RAATTY 1 cut(s) 262
AcuI CTGAAG 1 cut(s) 86
AfiI CCNNNNNNNGG 3 cut(s) 221, 233, 355
AgsI TTSAA 3 cut(s) 119, 267, 386
AluBI AGCT 1 cut(s) 378
AluI AGCT 1 cut(s) 378
Alw26I GTCTC 1 cut(s) 71
ApoI RAATTY 1 cut(s) 262
AspLEI GCGC 2 cut(s) 40, 426
AspS9I GGNCC 1 cut(s) 224
AvaII GGWCC 1 cut(s) 224
BbsI GAAGAC 1 cut(s) 107
BccI CCATC 2 cut(s) 90, 215
BcoDI GTCTC 1 cut(s) 71
BglII AGATCT 1 cut(s) 29
BisI GCNGC 2 cut(s) 41, 53
BlsI GCNGC 2 cut(s) 42, 54
Bme18I GGWCC 1 cut(s) 224
BmgT120I GGNCC 1 cut(s) 224
BmsI GCATC 2 cut(s) 320, 324
BpiI GAAGAC 1 cut(s) 107
BplI GAGNNNNNCTC 2 cut(s) 199, 231
BpuEI CTTGAG 2 cut(s) 226, 346
BsaXI ACNNNNNCTCC 2 cut(s) 68, 98
Bsc4I CCNNNNNNNGG 3 cut(s) 221, 233, 355
Bse1I ACTGG 1 cut(s) 167
Bse3DI GCAATG 1 cut(s) 296
BseLI CCNNNNNNNGG 3 cut(s) 221, 233, 355
BseMI GCAATG 1 cut(s) 296
BseMII CTCAG 1 cut(s) 170
BseNI ACTGG 1 cut(s) 167
BseRI GAGGAG 2 cut(s) 138, 404
BslFI GGGAC 1 cut(s) 332
BslI CCNNNNNNNGG 3 cut(s) 221, 233, 355
BsmAI GTCTC 1 cut(s) 71
BsmFI GGGAC 1 cut(s) 332
Bsp143I GATC 2 cut(s) 29, 409
BspACI CCGC 3 cut(s) 41, 52, 349
BspCNI CTCAG 1 cut(s) 169
BsrDI GCAATG 1 cut(s) 296
BsrI ACTGG 1 cut(s) 167
BssMI GATC 2 cut(s) 29, 409
BstDEI CTNAG 3 cut(s) 156, 195, 254
BstHHI GCGC 2 cut(s) 40, 426
BstKTI GATC 2 cut(s) 32, 412
BstMAI GTCTC 1 cut(s) 71
BstMBI GATC 2 cut(s) 29, 409
BstMWI GCNNNNNNNGC 1 cut(s) 49
BstV2I GAAGAC 1 cut(s) 107
BstX2I RGATCY 1 cut(s) 29
BstYI RGATCY 1 cut(s) 29
CfoI GCGC 2 cut(s) 40, 426
Cfr13I GGNCC 1 cut(s) 224
CviAII CATG 1 cut(s) 289
CviJI RGCY 2 cut(s) 100, 378
CviKI_1 RGCY 2 cut(s) 100, 378
DdeI CTNAG 3 cut(s) 156, 195, 254
DpnI GATC 2 cut(s) 31, 411
DpnII GATC 2 cut(s) 29, 409
Eco47I GGWCC 1 cut(s) 224
Eco57I CTGAAG 1 cut(s) 86
FaeI CATG 1 cut(s) 292
FaiI YATR 7 cut(s) 186, 241, 285, 290, 342, 391, 393
FalI AAGNNNNNCTT 2 cut(s) 188, 220
FaqI GGGAC 1 cut(s) 332
FatI CATG 1 cut(s) 288
Fnu4HI GCNGC 2 cut(s) 41, 53
Fsp4HI GCNGC 2 cut(s) 41, 53
GlaI GCGC 2 cut(s) 39, 425
GluI GCNGC 2 cut(s) 41, 53
HhaI GCGC 2 cut(s) 40, 426
Hin1II CATG 1 cut(s) 292
Hin6I GCGC 2 cut(s) 38, 424
HinP1I GCGC 2 cut(s) 38, 424
HindIII AAGCTT 1 cut(s) 376
Hpy188I TCNGA 2 cut(s) 64, 236
Hpy188III TCNNGA 3 cut(s) 205, 218, 325
HpyAV CCTTC 1 cut(s) 162
HpyCH4V TGCA 1 cut(s) 337
HpyF10VI GCNNNNNNNGC 1 cut(s) 49
HpyF3I CTNAG 3 cut(s) 156, 195, 254
Hsp92II CATG 1 cut(s) 292
HspAI GCGC 2 cut(s) 38, 424
Kzo9I GATC 2 cut(s) 29, 409
LpnPI CCDG 7 cut(s) 5, 18, 62, 96, 180, 231, 341
LweI GCATC 2 cut(s) 320, 324
MalI GATC 2 cut(s) 31, 411
MboI GATC 2 cut(s) 29, 409
MboII GAAGA 2 cut(s) 107, 116
MflI RGATCY 1 cut(s) 29
MluCI AATT 1 cut(s) 262
MmeI TCCRAC 1 cut(s) 156
MnlI CCTC 9 cut(s) 9, 156, 159, 201, 225, 312, 321, 389, 425
MspA1I CMGCKG 1 cut(s) 52
MwoI GCNNNNNNNGC 1 cut(s) 49
NdeII GATC 2 cut(s) 29, 409
NlaIII CATG 1 cut(s) 292
PflFI GACNNNGTC 1 cut(s) 82
PkrI GCNGC 2 cut(s) 42, 54
PspPI GGNCC 1 cut(s) 224
PsuI RGATCY 1 cut(s) 29
PsyI GACNNNGTC 1 cut(s) 82
SatI GCNGC 2 cut(s) 41, 53
Sau3AI GATC 2 cut(s) 29, 409
Sau96I GGNCC 1 cut(s) 224
SetI ASST 4 cut(s) 217, 229, 332, 380
SfaNI GCATC 2 cut(s) 320, 324
SinI GGWCC 1 cut(s) 224
SmlI CTYRAG 2 cut(s) 205, 325
SmoI CTYRAG 2 cut(s) 205, 325
Sse9I AATT 1 cut(s) 262
SsiI CCGC 3 cut(s) 41, 52, 349
TasI AATT 1 cut(s) 262
TauI GCSGC 2 cut(s) 43, 55
TspDTI ATGAA 2 cut(s) 17, 305
Tth111I GACNNNGTC 1 cut(s) 82
VpaK11BI GGWCC 1 cut(s) 224
XapI RAATTY 1 cut(s) 262
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.