Rh2AG396900
ERF Family

Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2A
OG0007521
Physical Location & Seq
Forward (+)
59279382 .. 59282609
3228 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2AG396900.1

Sequence Viewer

Length: 936 bp
ATGAACGGGGTAGGGAGGCAGGGGCAGAGATCTGGTGCGCCGCACCACCAGCGGCAATACTCGGATAACTTCTTGGAGACTTCGTCCAATGGGAGATGGCTTCAGTCTGCTGGTCTTCAACATCTTCACTCCAACTCATCAATCCCTCCTCCTTCTCAGGACTATGGTTACTATGGTGGAGGTGGTGGCGGAGGAGGAGGAGGACAGGGTTCTAGAATGTATCGGAATGGGCAGAGAGGGTATAATGAGTACTACATGGAGCCATCGACACCTCCCTATGATTCGCGGAGGAAGGACCGCGAGGACTCTCCCAATGAGTTTAGTCCTGGACTCCTGGATCTGCATTCCTTTGATACCGAGCTCATTCCTGACATGCCAGTCTCTGGAATGCATGATGTTGCTTCTCAATATTATCCTTCTCGGGGCAGAAGCTTTGATGATTCTGAACCTTATATTAACAACAAGCAAGCAGAAAGGGCTCGGTTACCAGAAAACAACCTCCTGAAAAGTTTTGCAGCAGACAAAGAGAAAGCAAGTTCTGTAGCAAAGATTAAAGTTGTGGTGCGCAAGAGACCACTTAACAAAAAGGAATTGGCAAAGAATGAGGAAGACATAATAGACACACTTTCCAACTCTGTAACAGTTCATGAGACCAAGCTCAAGTCTAATCCAGTTGGGTTATCTTACCATACAAACGCTAAGTGGTTCTTGAGGACACCTCCTGATGGACCTATTCTCGGAGTATATTTTTCTCTGCTAAGTAGAAATTCAAGGAGTGGAAAAACTTATACCATGAAACCATTGCCTCTAAAAGCATCACGGGACATCTTGAGGTTGATGCACCATACTTACCGCAGTCAGGGATTTCAGTTGTTTGTAAGCTTCTTTGAAATATATGGAGGAAAACTTTTTGATCTCCTCAATGAGCGCAAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000070 GO:0000226 GO:0000278 GO:0000280 GO:0000775 GO:0000776 GO:0000819 GO:0002376 GO:0002478 GO:0002495 GO:0002504 GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0003774 GO:0003777 GO:0003824 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0005737 GO:0005829 GO:0005856 GO:0005871 GO:0005874 GO:0005875 GO:0005886 GO:0006810 GO:0006890 GO:0006928 GO:0006996 GO:0007010 GO:0007017 GO:0007018 GO:0007019 GO:0007049 GO:0007059 GO:0007080 GO:0007163 GO:0008017 GO:0008092 GO:0008150 GO:0008283 GO:0008608 GO:0009987 GO:0015630 GO:0015631 GO:0016020 GO:0016043 GO:0016192 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019237 GO:0019882 GO:0019884 GO:0019886 GO:0022402 GO:0022411 GO:0030951 GO:0030952 GO:0031109 GO:0032984 GO:0032991 GO:0035371 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043565 GO:0043624 GO:0043933 GO:0044422 GO:0044424 GO:0044427 GO:0044430 GO:0044444 GO:0044446 GO:0044464 GO:0048002 GO:0048193 GO:0048285 GO:0050000 GO:0050789 GO:0050794 GO:0051010 GO:0051179 GO:0051234 GO:0051261 GO:0051276 GO:0051303 GO:0051310 GO:0051315 GO:0051640 GO:0051641 GO:0051649 GO:0051656 GO:0051983 GO:0065007 GO:0071840 GO:0071944 GO:0097159 GO:0097435 GO:0098687 GO:0098813 GO:0099080 GO:0099081 GO:0099512 GO:0099513 GO:0140014 GO:1901363 GO:1903047 GO:1903338 GO:1990752 GO:1990837
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Kinesin

Protein Analysis

311

Amino Acids

35.04

Weight (kDa)

9.45

Isoelectric Point (pI)

59.47

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Kinesin PF00225 258 - 310 1.3e-06 Kinesin motor domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 377
Acc16I TGCGCA 1 cut(s) 566
AccB7I CCANNNNNTGG 1 cut(s) 383
AccII CGCG 2 cut(s) 286, 300
AciI CCGC 6 cut(s) 41, 52, 189, 286, 298, 853
AclWI GGATC 1 cut(s) 345
AcsI RAATTY 1 cut(s) 766
AcuI CTGAAG 1 cut(s) 86
AfaI GTAC 1 cut(s) 251
AfiI CCNNNNNNNGG 5 cut(s) 383, 422, 725, 737, 859
AgsI TTSAA 3 cut(s) 119, 771, 890
AjnI CCWGG 2 cut(s) 325, 333
AluBI AGCT 4 cut(s) 361, 432, 658, 882
AluI AGCT 4 cut(s) 361, 432, 658, 882
Alw21I GWGCWC 1 cut(s) 363
Alw26I GTCTC 4 cut(s) 71, 385, 565, 644
AlwI GGATC 1 cut(s) 345
AlwNI CAGNNNCTG 1 cut(s) 383
Ama87I CYCGRG 1 cut(s) 420
ApeKI GCWGC 1 cut(s) 515
ApoI RAATTY 1 cut(s) 766
AspLEI GCGC 3 cut(s) 40, 567, 930
AspS9I GGNCC 2 cut(s) 295, 728
AvaI CYCGRG 1 cut(s) 420
AvaII GGWCC 2 cut(s) 295, 728
BanII GRGCYC 2 cut(s) 363, 481
BbsI GAAGAC 2 cut(s) 107, 615
Bbv12I GWGCWC 1 cut(s) 363
BbvI GCAGC 1 cut(s) 527
BccI CCATC 3 cut(s) 90, 271, 719
BciT130I CCWGG 2 cut(s) 327, 335
BcoDI GTCTC 4 cut(s) 71, 385, 565, 644
BfaI CTAG 1 cut(s) 213
BfmI CTRYAG 1 cut(s) 540
BglII AGATCT 1 cut(s) 29
BisI GCNGC 3 cut(s) 41, 53, 516
BlsI GCNGC 3 cut(s) 42, 54, 517
BmcAI AGTACT 1 cut(s) 251
Bme1390I CCNGG 2 cut(s) 327, 335
Bme18I GGWCC 2 cut(s) 295, 728
BmeT110I CYCGRG 1 cut(s) 420
BmgT120I GGNCC 2 cut(s) 295, 728
BmiI GGNNCC 1 cut(s) 261
BmrFI CCNGG 2 cut(s) 327, 335
BmsI GCATC 2 cut(s) 824, 828
BpiI GAAGAC 2 cut(s) 107, 615
BplI GAGNNNNNCTC 2 cut(s) 703, 735
BpuEI CTTGAG 3 cut(s) 644, 730, 850
BsaI GGTCTC 2 cut(s) 565, 644
BsaXI ACNNNNNCTCC 2 cut(s) 68, 98
Bsc4I CCNNNNNNNGG 5 cut(s) 383, 422, 725, 737, 859
Bse1I ACTGG 2 cut(s) 377, 671
Bse3DI GCAATG 1 cut(s) 800
BseBI CCWGG 2 cut(s) 327, 335
BseLI CCNNNNNNNGG 5 cut(s) 383, 422, 725, 737, 859
BseMI GCAATG 1 cut(s) 800
BseMII CTCAG 1 cut(s) 170
BseNI ACTGG 2 cut(s) 377, 671
BseRI GAGGAG 5 cut(s) 138, 207, 210, 213, 908
BseXI GCAGC 1 cut(s) 527
Bsh1236I CGCG 2 cut(s) 286, 300
BsiHKAI GWGCWC 1 cut(s) 363
BsiHKCI CYCGRG 1 cut(s) 420
BslFI GGGAC 1 cut(s) 836
BslI CCNNNNNNNGG 5 cut(s) 383, 422, 725, 737, 859
BsmAI GTCTC 4 cut(s) 71, 385, 565, 644
BsmFI GGGAC 1 cut(s) 836
BsmI GAATGC 2 cut(s) 343, 393
Bso31I GGTCTC 2 cut(s) 565, 644
BsoBI CYCGRG 1 cut(s) 420
Bsp1286I GDGCHC 2 cut(s) 363, 481
Bsp143I GATC 3 cut(s) 29, 337, 913
BspACI CCGC 6 cut(s) 41, 52, 189, 286, 298, 853
BspCNI CTCAG 1 cut(s) 169
BspFNI CGCG 2 cut(s) 286, 300
BspHI TCATGA 1 cut(s) 646
BspLI GGNNCC 1 cut(s) 261
BspPI GGATC 1 cut(s) 345
BspTNI GGTCTC 2 cut(s) 565, 644
BsrDI GCAATG 1 cut(s) 800
BsrI ACTGG 2 cut(s) 377, 671
BssMI GATC 3 cut(s) 29, 337, 913
Bst2UI CCWGG 2 cut(s) 327, 335
Bst4CI ACNGT 1 cut(s) 643
BstC8I GCNNGC 1 cut(s) 468
BstDEI CTNAG 3 cut(s) 156, 699, 758
BstEII GGTNACC 1 cut(s) 483
BstFNI CGCG 2 cut(s) 286, 300
BstHHI GCGC 3 cut(s) 40, 567, 930
BstKTI GATC 3 cut(s) 32, 340, 916
BstMAI GTCTC 4 cut(s) 71, 385, 565, 644
BstMBI GATC 3 cut(s) 29, 337, 913
BstMWI GCNNNNNNNGC 2 cut(s) 49, 476
BstNI CCWGG 2 cut(s) 327, 335
BstNSI RCATGY 1 cut(s) 376
BstPI GGTNACC 1 cut(s) 483
BstSCI CCNGG 2 cut(s) 325, 333
BstSFI CTRYAG 1 cut(s) 540
BstUI CGCG 2 cut(s) 286, 300
BstV1I GCAGC 1 cut(s) 527
BstV2I GAAGAC 2 cut(s) 107, 615
BstX2I RGATCY 2 cut(s) 29, 337
BstYI RGATCY 2 cut(s) 29, 337
Cac8I GCNNGC 1 cut(s) 468
CaiI CAGNNNCTG 1 cut(s) 383
CciI TCATGA 1 cut(s) 646
CfoI GCGC 3 cut(s) 40, 567, 930
Cfr13I GGNCC 2 cut(s) 295, 728
Csp6I GTAC 1 cut(s) 250
CviAII CATG 5 cut(s) 256, 373, 392, 647, 793
CviJI RGCY 7 cut(s) 100, 262, 361, 432, 479, 658, 882
CviKI_1 RGCY 7 cut(s) 100, 262, 361, 432, 479, 658, 882
CviQI GTAC 1 cut(s) 250
DdeI CTNAG 3 cut(s) 156, 699, 758
DpnI GATC 3 cut(s) 31, 339, 915
DpnII GATC 3 cut(s) 29, 337, 913
DrdI GACNNNNNNGTC 1 cut(s) 377
DseDI GACNNNNNNGTC 1 cut(s) 377
EciI GGCGGA 1 cut(s) 204
Ecl136II GAGCTC 1 cut(s) 361
Eco24I GRGCYC 2 cut(s) 363, 481
Eco31I GGTCTC 2 cut(s) 565, 644
Eco47I GGWCC 2 cut(s) 295, 728
Eco53kI GAGCTC 1 cut(s) 361
Eco57I CTGAAG 1 cut(s) 86
Eco88I CYCGRG 1 cut(s) 420
Eco91I GGTNACC 1 cut(s) 483
EcoICRI GAGCTC 1 cut(s) 361
EcoO65I GGTNACC 1 cut(s) 483
EcoRII CCWGG 2 cut(s) 325, 333
EcoT22I ATGCAT 1 cut(s) 393
EcoT38I GRGCYC 2 cut(s) 363, 481
FaeI CATG 5 cut(s) 259, 376, 395, 650, 796
FalI AAGNNNNNCTT 2 cut(s) 692, 724
FaqI GGGAC 1 cut(s) 836
FatI CATG 5 cut(s) 255, 372, 391, 646, 792
Fnu4HI GCNGC 3 cut(s) 41, 53, 516
FriOI GRGCYC 2 cut(s) 363, 481
Fsp4HI GCNGC 3 cut(s) 41, 53, 516
FspBI CTAG 1 cut(s) 213
FspI TGCGCA 1 cut(s) 566
GlaI GCGC 3 cut(s) 39, 566, 929
GluI GCNGC 3 cut(s) 41, 53, 516
HhaI GCGC 3 cut(s) 40, 567, 930
Hin1II CATG 5 cut(s) 259, 376, 395, 650, 796
Hin6I GCGC 3 cut(s) 38, 565, 928
HinP1I GCGC 3 cut(s) 38, 565, 928
HindIII AAGCTT 2 cut(s) 430, 880
HinfI GANTC 4 cut(s) 281, 305, 330, 440
Hpy188I TCNGA 4 cut(s) 64, 225, 445, 740
Hpy188III TCNNGA 9 cut(s) 158, 213, 368, 384, 502, 647, 709, 722, 829
HpyAV CCTTC 3 cut(s) 162, 286, 426
HpyCH4III ACNGT 1 cut(s) 643
HpyCH4V TGCA 4 cut(s) 343, 391, 515, 841
HpyF10VI GCNNNNNNNGC 2 cut(s) 49, 476
HpyF3I CTNAG 3 cut(s) 156, 699, 758
Hsp92II CATG 5 cut(s) 259, 376, 395, 650, 796
HspAI GCGC 3 cut(s) 38, 565, 928
Kzo9I GATC 3 cut(s) 29, 337, 913
LmnI GCTCC 1 cut(s) 259
Lsp1109I GCAGC 1 cut(s) 527
LweI GCATC 2 cut(s) 824, 828
MaeI CTAG 1 cut(s) 213
MaeIII GTNAC 3 cut(s) 167, 483, 637
MalI GATC 3 cut(s) 31, 339, 915
MboI GATC 3 cut(s) 29, 337, 913
MboII GAAGA 3 cut(s) 107, 116, 620
MflI RGATCY 2 cut(s) 29, 337
MhlI GDGCHC 2 cut(s) 363, 481
MluCI AATT 2 cut(s) 590, 766
MlyI GAGTC 2 cut(s) 299, 324
MmeI TCCRAC 2 cut(s) 156, 654
Mph1103I ATGCAT 1 cut(s) 393
MseI TTAA 3 cut(s) 456, 552, 579
MspA1I CMGCKG 1 cut(s) 52
MspR9I CCNGG 2 cut(s) 327, 335
Mva1269I GAATGC 2 cut(s) 343, 393
MvaI CCWGG 2 cut(s) 327, 335
MvnI CGCG 2 cut(s) 286, 300
MwoI GCNNNNNNNGC 2 cut(s) 49, 476
NdeII GATC 3 cut(s) 29, 337, 913
NlaIII CATG 5 cut(s) 259, 376, 395, 650, 796
NlaIV GGNNCC 1 cut(s) 261
NsbI TGCGCA 1 cut(s) 566
NsiI ATGCAT 1 cut(s) 393
NspI RCATGY 1 cut(s) 376
PagI TCATGA 1 cut(s) 646
PctI GAATGC 2 cut(s) 343, 393
PfeI GAWTC 2 cut(s) 281, 440
PflFI GACNNNGTC 1 cut(s) 82
PflMI CCANNNNNTGG 1 cut(s) 383
PfoI TCCNGGA 2 cut(s) 325, 333
PkrI GCNGC 3 cut(s) 42, 54, 517
PleI GAGTC 2 cut(s) 299, 324
PpsI GAGTC 2 cut(s) 299, 324
Psp124BI GAGCTC 1 cut(s) 363
Psp6I CCWGG 2 cut(s) 325, 333
PspEI GGTNACC 1 cut(s) 483
PspGI CCWGG 2 cut(s) 325, 333
PspN4I GGNNCC 1 cut(s) 261
PspPI GGNCC 2 cut(s) 295, 728
PstNI CAGNNNCTG 1 cut(s) 383
PsuI RGATCY 2 cut(s) 29, 337
PsyI GACNNNGTC 1 cut(s) 82
RsaI GTAC 1 cut(s) 251
RsaNI GTAC 1 cut(s) 250
SacI GAGCTC 1 cut(s) 363
SaqAI TTAA 3 cut(s) 456, 552, 579
SatI GCNGC 3 cut(s) 41, 53, 516
Sau3AI GATC 3 cut(s) 29, 337, 913
Sau96I GGNCC 2 cut(s) 295, 728
ScaI AGTACT 1 cut(s) 251
SchI GAGTC 2 cut(s) 299, 324
ScrFI CCNGG 2 cut(s) 327, 335
SduI GDGCHC 2 cut(s) 363, 481
SfaNI GCATC 2 cut(s) 824, 828
SfcI CTRYAG 1 cut(s) 540
SinI GGWCC 2 cut(s) 295, 728
SmlI CTYRAG 3 cut(s) 659, 709, 829
SmoI CTYRAG 3 cut(s) 659, 709, 829
Sse9I AATT 2 cut(s) 590, 766
SsiI CCGC 6 cut(s) 41, 52, 189, 286, 298, 853
SspI AATATT 1 cut(s) 410
SspMI CTAG 1 cut(s) 213
SstI GAGCTC 1 cut(s) 363
StyD4I CCNGG 2 cut(s) 325, 333
TaaI ACNGT 1 cut(s) 643
TaqI TCGA 1 cut(s) 266
TasI AATT 2 cut(s) 590, 766
TatI WGTACW 1 cut(s) 249
TauI GCSGC 2 cut(s) 43, 55
TfiI GAWTC 2 cut(s) 281, 440
Tru1I TTAA 3 cut(s) 456, 552, 579
Tru9I TTAA 3 cut(s) 456, 552, 579
TseI GCWGC 1 cut(s) 515
TspDTI ATGAA 3 cut(s) 17, 635, 809
Tth111I GACNNNGTC 1 cut(s) 82
Van91I CCANNNNNTGG 1 cut(s) 383
VpaK11BI GGWCC 2 cut(s) 295, 728
XapI RAATTY 1 cut(s) 766
XbaI TCTAGA 1 cut(s) 212
XceI RCATGY 1 cut(s) 376
XspI CTAG 1 cut(s) 213
ZrmI AGTACT 1 cut(s) 251
Zsp2I ATGCAT 1 cut(s) 393
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.