RLG00000034360
ERF Family

Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
OG0007521
Physical Location & Seq
Reverse (-)
41381931 .. 41385874
3944 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000034360

Sequence Viewer

Length: 792 bp
ATGGGTTTTAATTATAGATGGGTGGAGATTTGGGGATGCCTGTATTCCTTGAAGAAGACTGCTTTCTTCAAGAGTGAGATTTGGAGGAGGTTGTTTGTGACAGCAGTACTGATTGTGATTAGTCGTGTTGGTTGTTTCATTACTCTGCCTGGGTTTGATAGAAGGTTGATACCTCAGGATTATCTCAGGTTTGTCTCGGGATCAGTTGATGAGCTCGGCGATTTTACAGCAGAGCTTAAAATGTCCTTGTCCCAGTTTGGAATCAGTCCTCAAATTATAGCATCGATTATCATACAGGGTCAAGCATGTGATGCTGACAAGTATGTTATTGTGATCTCATCAAAGAGGAGTGGAAAAACTTATACCATGAAACCATTGCCTCTAAAAGCATCACGGGACATCTTGAGGTTGATGCACCATACTTACCGCAGTCAGGGATTTAAGTTGTTTGTAAGCTTCTTTGAAATATATGGAGGAAAACTTTTTGATCTGCTCAATGAGCGCAAAAAGCTTTGCATGAGAAAAGATGGTAAGCAACAAGTTTGTATTGTGGGTTTGCAAGAATACAAAGTGTCTGATGTAGAGACAATTAAAGAGCTCATTGAGAAAGGAAGTGCCACAAGAAGTACTGGTACCACTGGTGCAAATGAAGAATCCTCTCACTCATATGCCATACTTCAGCTTGCTATCGAAAGGGCAGTTGATGACAATGTATCAAAGCCTCCCTGTCTTGTTGCAGCTGTACTTTTCATTCTACAAGATCACCTTATGTCCTTGATAATTCCAGTATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000070 GO:0000226 GO:0000278 GO:0000280 GO:0000775 GO:0000776 GO:0000819 GO:0002376 GO:0002478 GO:0002495 GO:0002504 GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0003774 GO:0003777 GO:0003824 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0005737 GO:0005829 GO:0005856 GO:0005871 GO:0005874 GO:0005875 GO:0005886 GO:0006810 GO:0006890 GO:0006928 GO:0006996 GO:0007010 GO:0007017 GO:0007018 GO:0007019 GO:0007049 GO:0007059 GO:0007080 GO:0007163 GO:0008017 GO:0008092 GO:0008150 GO:0008283 GO:0008608 GO:0009987 GO:0015630 GO:0015631 GO:0016020 GO:0016043 GO:0016192 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019237 GO:0019882 GO:0019884 GO:0019886 GO:0022402 GO:0022411 GO:0030951 GO:0030952 GO:0031109 GO:0032984 GO:0032991 GO:0035371 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043565 GO:0043624 GO:0043933 GO:0044422 GO:0044424 GO:0044427 GO:0044430 GO:0044444 GO:0044446 GO:0044464 GO:0048002 GO:0048193 GO:0048285 GO:0050000 GO:0050789 GO:0050794 GO:0051010 GO:0051179 GO:0051234 GO:0051261 GO:0051276 GO:0051303 GO:0051310 GO:0051315 GO:0051640 GO:0051641 GO:0051649 GO:0051656 GO:0051983 GO:0065007 GO:0071840 GO:0071944 GO:0097159 GO:0097435 GO:0098687 GO:0098813 GO:0099080 GO:0099081 GO:0099512 GO:0099513 GO:0140014 GO:1901363 GO:1903047 GO:1903338 GO:1990752 GO:1990837
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Kinesin

Protein Analysis

264

Amino Acids

29.75

Weight (kDa)

9.15

Isoelectric Point (pI)

51.03

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Kinesin PF00225 116 - 238 1.7e-26 Kinesin motor domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 632
AccB1I GGYRCC 1 cut(s) 632
AciI CCGC 1 cut(s) 427
AclWI GGATC 1 cut(s) 208
AcuI CTGAAG 1 cut(s) 662
AfaI GTAC 4 cut(s) 108, 628, 634, 744
AfiI CCNNNNNNNGG 1 cut(s) 433
AgsI TTSAA 3 cut(s) 52, 70, 464
AjnI CCWGG 1 cut(s) 148
AluBI AGCT 7 cut(s) 214, 235, 456, 511, 598, 682, 740
AluI AGCT 7 cut(s) 214, 235, 456, 511, 598, 682, 740
Alw21I GWGCWC 2 cut(s) 216, 600
Alw26I GTCTC 2 cut(s) 199, 578
AlwI GGATC 1 cut(s) 208
Ama87I CYCGRG 1 cut(s) 196
ApeKI GCWGC 1 cut(s) 737
Asp718I GGTACC 1 cut(s) 632
AspLEI GCGC 1 cut(s) 504
AsuHPI GGTGA 1 cut(s) 755
AvaI CYCGRG 1 cut(s) 196
AxyI CCTNAGG 1 cut(s) 174
BanI GGYRCC 1 cut(s) 632
BanII GRGCYC 2 cut(s) 216, 600
BarI GAAGNNNNNNTAC 2 cut(s) 616, 648
BbsI GAAGAC 1 cut(s) 62
Bbv12I GWGCWC 2 cut(s) 216, 600
BbvI GCAGC 1 cut(s) 749
BccI CCATC 2 cut(s) 12, 521
BciT130I CCWGG 1 cut(s) 150
BcoDI GTCTC 2 cut(s) 199, 578
BisI GCNGC 1 cut(s) 738
BlsI GCNGC 1 cut(s) 739
BmcAI AGTACT 2 cut(s) 108, 628
Bme1390I CCNGG 1 cut(s) 150
BmeT110I CYCGRG 1 cut(s) 196
BmiI GGNNCC 1 cut(s) 634
BmrFI CCNGG 1 cut(s) 150
BmrI ACTGGG 1 cut(s) 247
BmsI GCATC 5 cut(s) 26, 290, 301, 398, 402
BmuI ACTGGG 1 cut(s) 247
BpiI GAAGAC 1 cut(s) 62
BpuEI CTTGAG 1 cut(s) 424
Bsa29I ATCGAT 1 cut(s) 284
BsaJI CCNNGG 1 cut(s) 149
Bsc4I CCNNNNNNNGG 1 cut(s) 433
Bse1I ACTGG 4 cut(s) 253, 634, 643, 785
Bse21I CCTNAGG 1 cut(s) 174
Bse3DI GCAATG 1 cut(s) 374
BseBI CCWGG 1 cut(s) 150
BseCI ATCGAT 1 cut(s) 284
BseDI CCNNGG 1 cut(s) 149
BseGI GGATG 1 cut(s) 41
BseLI CCNNNNNNNGG 1 cut(s) 433
BseMI GCAATG 1 cut(s) 374
BseMII CTCAG 2 cut(s) 188, 199
BseNI ACTGG 4 cut(s) 253, 634, 643, 785
BseRI GAGGAG 2 cut(s) 100, 361
BseXI GCAGC 1 cut(s) 749
BshNI GGYRCC 1 cut(s) 632
BshVI ATCGAT 1 cut(s) 284
BsiHKAI GWGCWC 2 cut(s) 216, 600
BsiHKCI CYCGRG 1 cut(s) 196
BslFI GGGAC 2 cut(s) 235, 410
BslI CCNNNNNNNGG 1 cut(s) 433
BsmAI GTCTC 2 cut(s) 199, 578
BsmFI GGGAC 2 cut(s) 235, 410
BsoBI CYCGRG 1 cut(s) 196
Bsp1286I GDGCHC 2 cut(s) 216, 600
Bsp143I GATC 4 cut(s) 200, 333, 487, 760
BspACI CCGC 1 cut(s) 427
BspCNI CTCAG 2 cut(s) 187, 198
BspDI ATCGAT 1 cut(s) 284
BspLI GGNNCC 1 cut(s) 634
BspPI GGATC 1 cut(s) 208
BspT107I GGYRCC 1 cut(s) 632
BsrDI GCAATG 1 cut(s) 374
BsrI ACTGG 4 cut(s) 253, 634, 643, 785
BssECI CCNNGG 1 cut(s) 149
BssMI GATC 4 cut(s) 200, 333, 487, 760
Bst2UI CCWGG 1 cut(s) 150
BstAPI GCANNNNNTGC 1 cut(s) 311
BstC8I GCNNGC 1 cut(s) 684
BstDEI CTNAG 2 cut(s) 174, 185
BstF5I GGATG 1 cut(s) 41
BstHHI GCGC 1 cut(s) 504
BstKTI GATC 4 cut(s) 203, 336, 490, 763
BstMAI GTCTC 2 cut(s) 199, 578
BstMBI GATC 4 cut(s) 200, 333, 487, 760
BstMWI GCNNNNNNNGC 3 cut(s) 311, 499, 508
BstNI CCWGG 1 cut(s) 150
BstNSI RCATGY 1 cut(s) 309
BstSCI CCNGG 1 cut(s) 148
BstV1I GCAGC 1 cut(s) 749
BstV2I GAAGAC 1 cut(s) 62
Bsu15I ATCGAT 1 cut(s) 284
Bsu36I CCTNAGG 1 cut(s) 174
BsuTUI ATCGAT 1 cut(s) 284
BtsCI GGATG 1 cut(s) 41
BtsIMutI CAGTG 1 cut(s) 636
Cac8I GCNNGC 1 cut(s) 684
CfoI GCGC 1 cut(s) 504
ClaI ATCGAT 1 cut(s) 284
Csp6I GTAC 4 cut(s) 107, 627, 633, 743
CviAII CATG 3 cut(s) 306, 367, 517
CviJI RGCY 8 cut(s) 214, 235, 456, 511, 598, 682, 721, 740
CviKI_1 RGCY 8 cut(s) 214, 235, 456, 511, 598, 682, 721, 740
CviQI GTAC 4 cut(s) 107, 627, 633, 743
DdeI CTNAG 2 cut(s) 174, 185
DpnI GATC 4 cut(s) 202, 335, 489, 762
DpnII GATC 4 cut(s) 200, 333, 487, 760
Ecl136II GAGCTC 2 cut(s) 214, 598
Eco24I GRGCYC 2 cut(s) 216, 600
Eco53kI GAGCTC 2 cut(s) 214, 598
Eco57I CTGAAG 1 cut(s) 662
Eco81I CCTNAGG 1 cut(s) 174
Eco88I CYCGRG 1 cut(s) 196
EcoICRI GAGCTC 2 cut(s) 214, 598
EcoRII CCWGG 1 cut(s) 148
EcoT38I GRGCYC 2 cut(s) 216, 600
FaeI CATG 3 cut(s) 309, 370, 520
FalI AAGNNNNNCTT 2 cut(s) 750, 782
FaqI GGGAC 2 cut(s) 235, 410
FatI CATG 3 cut(s) 305, 366, 516
FauNDI CATATG 1 cut(s) 667
Fnu4HI GCNGC 1 cut(s) 738
FokI GGATG 1 cut(s) 48
FriOI GRGCYC 2 cut(s) 216, 600
Fsp4HI GCNGC 1 cut(s) 738
GlaI GCGC 1 cut(s) 503
GluI GCNGC 1 cut(s) 738
HhaI GCGC 1 cut(s) 504
Hin1II CATG 3 cut(s) 309, 370, 520
Hin6I GCGC 1 cut(s) 502
HinP1I GCGC 1 cut(s) 502
HindIII AAGCTT 2 cut(s) 454, 509
HinfI GANTC 2 cut(s) 261, 653
HphI GGTGA 1 cut(s) 755
Hpy188I TCNGA 1 cut(s) 577
Hpy188III TCNNGA 4 cut(s) 70, 176, 198, 403
HpyAV CCTTC 1 cut(s) 156
HpyCH4V TGCA 5 cut(s) 415, 516, 559, 644, 737
HpyF10VI GCNNNNNNNGC 3 cut(s) 311, 499, 508
HpyF3I CTNAG 2 cut(s) 174, 185
Hsp92II CATG 3 cut(s) 309, 370, 520
HspAI GCGC 1 cut(s) 502
KpnI GGTACC 1 cut(s) 636
Kzo9I GATC 4 cut(s) 200, 333, 487, 760
Lsp1109I GCAGC 1 cut(s) 749
LweI GCATC 5 cut(s) 26, 290, 301, 398, 402
MaeIII GTNAC 1 cut(s) 97
MalI GATC 4 cut(s) 202, 335, 489, 762
MboI GATC 4 cut(s) 200, 333, 487, 760
MboII GAAGA 4 cut(s) 58, 64, 67, 662
MhlI GDGCHC 2 cut(s) 216, 600
MluCI AATT 4 cut(s) 10, 273, 588, 780
MseI TTAA 4 cut(s) 9, 237, 441, 591
MslI CAYNNNNRTG 1 cut(s) 666
MspA1I CMGCKG 1 cut(s) 740
MspR9I CCNGG 1 cut(s) 150
MvaI CCWGG 1 cut(s) 150
MwoI GCNNNNNNNGC 3 cut(s) 311, 499, 508
NdeI CATATG 1 cut(s) 667
NdeII GATC 4 cut(s) 200, 333, 487, 760
NlaIII CATG 3 cut(s) 309, 370, 520
NlaIV GGNNCC 1 cut(s) 634
NmeAIII GCCGAG 1 cut(s) 195
NmuCI GTSAC 1 cut(s) 97
NspI RCATGY 1 cut(s) 309
PfeI GAWTC 2 cut(s) 261, 653
PkrI GCNGC 1 cut(s) 739
Psp124BI GAGCTC 2 cut(s) 216, 600
Psp6I CCWGG 1 cut(s) 148
PspGI CCWGG 1 cut(s) 148
PspN4I GGNNCC 1 cut(s) 634
PvuII CAGCTG 1 cut(s) 740
RsaI GTAC 4 cut(s) 108, 628, 634, 744
RsaNI GTAC 4 cut(s) 107, 627, 633, 743
RseI CAYNNNNRTG 1 cut(s) 666
SacI GAGCTC 2 cut(s) 216, 600
SaqAI TTAA 4 cut(s) 9, 237, 441, 591
SatI GCNGC 1 cut(s) 738
Sau3AI GATC 4 cut(s) 200, 333, 487, 760
ScaI AGTACT 2 cut(s) 108, 628
ScrFI CCNGG 1 cut(s) 150
SduI GDGCHC 2 cut(s) 216, 600
SfaNI GCATC 5 cut(s) 26, 290, 301, 398, 402
SmiMI CAYNNNNRTG 1 cut(s) 666
SmlI CTYRAG 1 cut(s) 403
SmoI CTYRAG 1 cut(s) 403
Sse9I AATT 4 cut(s) 10, 273, 588, 780
SsiI CCGC 1 cut(s) 427
SstI GAGCTC 2 cut(s) 216, 600
StyD4I CCNGG 1 cut(s) 148
TaqI TCGA 2 cut(s) 284, 690
TasI AATT 4 cut(s) 10, 273, 588, 780
TatI WGTACW 3 cut(s) 106, 626, 742
TfiI GAWTC 2 cut(s) 261, 653
Tru1I TTAA 4 cut(s) 9, 237, 441, 591
Tru9I TTAA 4 cut(s) 9, 237, 441, 591
TscAI CASTG 1 cut(s) 643
TseFI GTSAC 1 cut(s) 97
TseI GCWGC 1 cut(s) 737
Tsp45I GTSAC 1 cut(s) 97
TspDTI ATGAA 4 cut(s) 127, 383, 663, 739
TspRI CASTG 1 cut(s) 643
XceI RCATGY 1 cut(s) 309
ZrmI AGTACT 2 cut(s) 108, 628
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.