RLG00000019129
ERF Family

Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
OG0007521
Physical Location & Seq
Reverse (-)
46990548 .. 46990980
433 bp
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UTR
Exon/CDS
Intron
RLM00000019129

Sequence Viewer

Length: 342 bp
ATGAAACCATTGCCTCTAAAAGCATCACGGGACATCTTGAGGTTGATGCACCATACTTACCGCAGTCAGGGATTTCAGTTGTTTGTAAGCTTCTTGGAAATATATGGAGGAAAACTTTTTGATCTCCTCAATGAGCGCAAAAAGCTTTGCATGAGAGAAGATGGTAAGCAACAAGTTTGTATTGTGGGTTTGCAAGAATATAGTGTGTCTGATGCAGAGACAATTAAAGAGCTTATTGAGAAAGGAAGTGCCACAATAAGTACTGGTAGTCTGGTACCACTGGTGCAAATGAAGAATCCTCTCGCTCACATGCCGTACTTCAGCTTGCTATCAAGAGGGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000070 GO:0000226 GO:0000278 GO:0000280 GO:0000775 GO:0000776 GO:0000819 GO:0002376 GO:0002478 GO:0002495 GO:0002504 GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0003774 GO:0003777 GO:0003824 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0005737 GO:0005813 GO:0005815 GO:0005829 GO:0005856 GO:0005871 GO:0005874 GO:0005875 GO:0005886 GO:0006810 GO:0006890 GO:0006928 GO:0006996 GO:0007010 GO:0007017 GO:0007018 GO:0007019 GO:0007049 GO:0007051 GO:0007052 GO:0007059 GO:0007080 GO:0007163 GO:0008017 GO:0008092 GO:0008150 GO:0008283 GO:0008608 GO:0009987 GO:0015630 GO:0015631 GO:0016020 GO:0016043 GO:0016192 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019237 GO:0019882 GO:0019884 GO:0019886 GO:0022402 GO:0022411 GO:0030951 GO:0030952 GO:0031109 GO:0032984 GO:0032991 GO:0035371 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043565 GO:0043624 GO:0043933 GO:0044422 GO:0044424 GO:0044427 GO:0044430 GO:0044444 GO:0044446 GO:0044464 GO:0048002 GO:0048193 GO:0048285 GO:0050000 GO:0050789 GO:0050794 GO:0051010 GO:0051179 GO:0051234 GO:0051261 GO:0051276 GO:0051303 GO:0051310 GO:0051315 GO:0051640 GO:0051641 GO:0051649 GO:0051656 GO:0051983 GO:0065007 GO:0071840 GO:0071944 GO:0097159 GO:0097435 GO:0098687 GO:0098813 GO:0099080 GO:0099081 GO:0099512 GO:0099513 GO:0140014 GO:1901363 GO:1902850 GO:1903047 GO:1903338 GO:1990752 GO:1990837
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Kinesin

Protein Analysis

114

Amino Acids

12.83

Weight (kDa)

9.2

Isoelectric Point (pI)

41.25

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Kinesin PF00225 8 - 89 2.2e-14 Kinesin motor domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 274
AccB1I GGYRCC 1 cut(s) 274
AciI CCGC 1 cut(s) 61
AcuI CTGAAG 1 cut(s) 304
AfaI GTAC 3 cut(s) 262, 276, 317
AfiI CCNNNNNNNGG 1 cut(s) 67
AluBI AGCT 4 cut(s) 90, 145, 232, 324
AluI AGCT 4 cut(s) 90, 145, 232, 324
Alw26I GTCTC 1 cut(s) 212
Asp718I GGTACC 1 cut(s) 274
AspLEI GCGC 1 cut(s) 138
BanI GGYRCC 1 cut(s) 274
BccI CCATC 1 cut(s) 155
BceAI ACGGC 1 cut(s) 298
BcoDI GTCTC 1 cut(s) 212
BmcAI AGTACT 1 cut(s) 262
BmiI GGNNCC 1 cut(s) 276
BmsI GCATC 3 cut(s) 32, 36, 202
BpuEI CTTGAG 1 cut(s) 58
Bsc4I CCNNNNNNNGG 1 cut(s) 67
Bse1I ACTGG 2 cut(s) 268, 285
Bse3DI GCAATG 1 cut(s) 8
BseLI CCNNNNNNNGG 1 cut(s) 67
BseMI GCAATG 1 cut(s) 8
BseNI ACTGG 2 cut(s) 268, 285
BseRI GAGGAG 1 cut(s) 116
BshNI GGYRCC 1 cut(s) 274
BslFI GGGAC 1 cut(s) 44
BslI CCNNNNNNNGG 1 cut(s) 67
BsmAI GTCTC 1 cut(s) 212
BsmFI GGGAC 1 cut(s) 44
Bsp143I GATC 1 cut(s) 121
BspACI CCGC 1 cut(s) 61
BspLI GGNNCC 1 cut(s) 276
BspT107I GGYRCC 1 cut(s) 274
BsrDI GCAATG 1 cut(s) 8
BsrI ACTGG 2 cut(s) 268, 285
BssMI GATC 1 cut(s) 121
BstC8I GCNNGC 1 cut(s) 326
BstHHI GCGC 1 cut(s) 138
BstKTI GATC 1 cut(s) 124
BstMAI GTCTC 1 cut(s) 212
BstMBI GATC 1 cut(s) 121
BstMWI GCNNNNNNNGC 1 cut(s) 142
BstNSI RCATGY 1 cut(s) 313
BtsIMutI CAGTG 1 cut(s) 278
Cac8I GCNNGC 1 cut(s) 326
CfoI GCGC 1 cut(s) 138
Csp6I GTAC 3 cut(s) 261, 275, 316
CviAII CATG 2 cut(s) 151, 310
CviJI RGCY 4 cut(s) 90, 145, 232, 324
CviKI_1 RGCY 4 cut(s) 90, 145, 232, 324
CviQI GTAC 3 cut(s) 261, 275, 316
DpnI GATC 1 cut(s) 123
DpnII GATC 1 cut(s) 121
Eco57I CTGAAG 1 cut(s) 304
FaeI CATG 2 cut(s) 154, 313
FaiI YATR 6 cut(s) 54, 103, 105, 152, 201, 311
FaqI GGGAC 1 cut(s) 44
FatI CATG 2 cut(s) 150, 309
GlaI GCGC 1 cut(s) 137
HhaI GCGC 1 cut(s) 138
Hin1II CATG 2 cut(s) 154, 313
Hin6I GCGC 1 cut(s) 136
HinP1I GCGC 1 cut(s) 136
HindIII AAGCTT 2 cut(s) 88, 143
HinfI GANTC 1 cut(s) 295
Hpy188I TCNGA 1 cut(s) 211
Hpy188III TCNNGA 2 cut(s) 37, 333
HpyCH4V TGCA 5 cut(s) 49, 150, 193, 215, 286
HpyF10VI GCNNNNNNNGC 1 cut(s) 142
Hsp92II CATG 2 cut(s) 154, 313
HspAI GCGC 1 cut(s) 136
KpnI GGTACC 1 cut(s) 278
Kzo9I GATC 1 cut(s) 121
LpnPI CCDG 4 cut(s) 53, 249, 257, 266
LweI GCATC 3 cut(s) 32, 36, 202
MalI GATC 1 cut(s) 123
MboI GATC 1 cut(s) 121
MboII GAAGA 2 cut(s) 170, 304
MluCI AATT 1 cut(s) 222
MnlI CCTC 6 cut(s) 24, 33, 101, 137, 309, 329
MseI TTAA 1 cut(s) 225
MwoI GCNNNNNNNGC 1 cut(s) 142
NdeII GATC 1 cut(s) 121
NlaIII CATG 2 cut(s) 154, 313
NlaIV GGNNCC 1 cut(s) 276
NspI RCATGY 1 cut(s) 313
PfeI GAWTC 1 cut(s) 295
PspN4I GGNNCC 1 cut(s) 276
RsaI GTAC 3 cut(s) 262, 276, 317
RsaNI GTAC 3 cut(s) 261, 275, 316
SaqAI TTAA 1 cut(s) 225
Sau3AI GATC 1 cut(s) 121
ScaI AGTACT 1 cut(s) 262
SetI ASST 5 cut(s) 44, 92, 147, 234, 326
SfaNI GCATC 3 cut(s) 32, 36, 202
SmlI CTYRAG 1 cut(s) 37
SmoI CTYRAG 1 cut(s) 37
Sse9I AATT 1 cut(s) 222
SsiI CCGC 1 cut(s) 61
TasI AATT 1 cut(s) 222
TatI WGTACW 1 cut(s) 260
TfiI GAWTC 1 cut(s) 295
Tru1I TTAA 1 cut(s) 225
Tru9I TTAA 1 cut(s) 225
TscAI CASTG 1 cut(s) 285
TspDTI ATGAA 2 cut(s) 17, 305
TspRI CASTG 1 cut(s) 285
XceI RCATGY 1 cut(s) 313
ZrmI AGTACT 1 cut(s) 262
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.