Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr16

Orthogroup ID

OG0002715

Physical Location & Seq

Genomic Coordinates Forward (+)

2197399 .. 2203842

Gene Structure 6444 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD16G1030900.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2175 bp

ATGCATACGTTTGAGAGAAATATCACACTTGTTCTTCTGGTAATTAAAGGAAAGGTGTATCGGTATCTTATGGAATTGTATAAAAACAAATTGGAGTATAGTGGGGATGTGATGAGTGCAATAGTTCCCTTGATGAAACTTTTGTCCCTCACGGTTATCGGGCTGGTTCTTTCGCACCCGAAAACTGAGTTGATACCCAGAGCTACTTTTAAGCTCCTCAGCAAGCTTGTTTTCGCCTTGTTCTTGCCCTGTCTAATCTTTACCGAGCTAGGTGGATCGATTACACTTGAAAACTTTATTAAGTGGTGGTTTATCCCATTTAATGTGTTGGTGAGTACGCTTATTGGTTGCTTCCTCGGGTATTTAGTGGTGATCATATGTAGTCCTCCCCCACAGTTGAACAGATTCACCATAATCATGACGGCGTTCGGGAATACTGGAAATCTCCCAGTTGCCATTGTTGGATCTGTCTGTCATACTCCGAAAAACCCATTTGGACAGCATTGTCACTCCCGAGGGGTGGCTTATGTCTCTTTTGCCCGATGGGTTGCTGTAATTCTTGTATATACCTTTGTTTACCACATGATGGAGCCTCCGTTGGAGTACTATGAGATAGTTGAAGAAGGGTGTGAAAAGGAGGAACCACTACCTAACGTTACGAGCAGGCCTCTACTTGTAGAAGCTGAATGGCCGGGTATTGAAGAAAAAGAAACCGAGCTTTCCAAGGCACCCTTTATTGCTAGGGTTTTCAAAAGCATCTCAAACGTTTCGCTCAACACTTTGCCAGATGTTGATCTCTCGGGAGAAGGTGGCCGAAACAGTCCCAGGTCGGCTAGGTGTTTGGCTGAACCTAGGGTGGTCAAGAGGATGAGAATCGTTGCCGAGCAAACTCCATTACAGCACATACTGCAACCTCCAACAATTGCCTCTTTATTGGCTATCACCATCGGGACAATGCCAATGTTAAAAGCTTTTTTCTTCGGAGATGATGCTCCACTGTCCTTCATCACAGACAGTTTAGAGATTTTAGCCGGTGCAGTGGTGCCTTCGGTGATGCTTATTCTTGGGGGTATGCTTGCAGAGGGGCCAAATGAGTCTACGCTTGGCCTCCGGACAACTGTTGGTATAACTGTGGCAAGGCTTTTACTGCTTCCTCTGGTGGGAATTGGTATAGTGGCGTTGGCCGATAAGCTCAATTTTCTGGTCGACGACGATGCAATGTACAAGTTTGTGCTCTTGATGCAGTACACGACACCGAGTGCAATTTTATTGGGAGCAATAGCCAGCTTGAGGGGTTACGCAGTTAGAGAGGCCTCGGCAATCCTCTTCTGGCAGCATGTTAATAGTTTCTTTTTGTTGCCCCCATTTTTATATTGGGTTCTTCACAATCCGGCCATGGAAGCTGGGATTTTGTTGCCTCCGCCGACCTCCTCCTCCCCTCTATCACCTCCTACATCGTCTGTGATTCTAACCCAGGACGAGTTGAAGAAAATCGCCGCCTACAAGGCCGTCGAGTATGTTGAGTCCGGCATGGTCCTCGGTCTCGGCACCGGCTCCACCGCCAAGCACGCCGTCAACCGAATCGGCGAGCTTTTGAAACAGGGGAAGCTTCAGAACATTGTAGGAATACCCACGTCGAAAATGACCCACGAGCAAGCCCTGTCTCTTGGAATTCCGTTGTCGGACCTCGATTCGCACCCTGTTCTTGATCTCGCGATCGACGGCGCCGACGAGGTCGATCCCCACCTCAATTTGGTCAAGGGCCGAGGTGGATCCCTCTTGAGGGAGAAGATGGTGGAGGGTGCTTGTAAGAAATTCGTCTGCATCGTCGACGAGTCGAAGCTCGTGAAGCATTTGGGAGGCAGCGGGCTGGCGATGCCGGTGGAGATTGTGCCATTCTGCTGGAAATTCACTGCTAAAAAGCTCCAGGATTTGTTTGAGTACGCGGGTTGCGTCGGAAAGCTGAGGACTTTCGTCGAAAATGGCAAGCCTTTTGTGACGGACAATGGGAATTACATTGTGGATTTGTATTTCCAGAAAGATATTGGGGATTTGAAGGCGGCCAGCGATGCGATTTTGCAGCTTGCCGGAGTTGTGGAGCATGGGATGTTCCTGGACATGGCAACCACTGTGATTGTTGCAGGGGAGCTCGGAATAACGGTGAAGAATAAGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005789 GO:0006810 GO:0007275 GO:0008150 GO:0009653 GO:0009719 GO:0009725 GO:0009733 GO:0009791 GO:0009914 GO:0009966 GO:0010015 GO:0010033 GO:0010101 GO:0010102 GO:0010252 GO:0010311 GO:0010315 GO:0010329 GO:0010646 GO:0010817 GO:0010928 GO:0012505 GO:0015562 GO:0016020 GO:0016021 GO:0022622 GO:0022857 GO:0023051 GO:0031224 GO:0031984 GO:0032501 GO:0032502 GO:0040008 GO:0040009 GO:0042175 GO:0042221 GO:0042592 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044444 GO:0044446 GO:0044464 GO:0048364 GO:0048527 GO:0048528 GO:0048583 GO:0048646 GO:0048731 GO:0048856 GO:0048878 GO:0050789 GO:0050794 GO:0050896 GO:0051179 GO:0051234 GO:0055085 GO:0060918 GO:0065007 GO:0065008 GO:0080161 GO:0090696 GO:0090697 GO:0090698 GO:0098827 GO:0099402 GO:1905392 GO:1905393

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Mem_trans

Protein Analysis

725

Amino Acids

79.16

Weight (kDa)

6.34

Isoelectric Point (pI)

35.17

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Mem_trans	PF03547	40 - 454	8.8e-86	Membrane transport protein
Rib_5-P_isom_A	PF06026	541 - 716	1.8e-61	Ribose 5-phosphate isomerase A (phosphoriboisomerase A)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002715)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G71090
fragaria_vesca	FvH4_1g29070 FvH4_1g29070 FvH4_1g29070 FvH4_1g29070 FvH4_4g32170 FvH4_4g32170 FvH4_4g32170
malus_domestica	MD13G1027800.v1.1 MD16G1030900.v1.1 MD17G1281100.v1.1
prunus_persica	Prupe.1G322300_v2.0.a1 Prupe.1G322300_v2.0.a1 Prupe.3G151300_v2.0.a1 Prupe.3G151300_v2.0.a1 Prupe.3G151300_v2.0.a1 Prupe.3G151300_v2.0.a1
pyrus_communis	pycom13g02630 pycom17g25670 pycom17g27880
rosa_chinensis	RchiOBHm_Chr3g0493591 RchiOBHm_Chr4g0440881
rosa_laevigata	RLG00000006141 RLG00000022701
rosa_multiflora	Rmu_sc0000568.1_g000007 Rmu_sc0005054.1_g000009
rosa_roxburghii	Rroxscaffold_5G00381740 Rroxscaffold_6G00391430
rosa_rugosa	Rorug03G0263000 Rorug04G0329200
rosa_samantha	Rh3BG347800 Rh3CG345600 Rh3DG347900 Rh4AG380900 Rh4BG394000 Rh4CG408800 Rh4DG387400
rosa_wichuraiana	Rw3G027360 Rw4G032800

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	504
AccB1I	GGYRCC	4 cut(s)	727, 1042, 1547, 1724
AccB7I	CCANNNNNTGG	1 cut(s)	586
AccI	GTMKAC	3 cut(s)	1097, 1206, 1830
AccII	CGCG	2 cut(s)	1715, 1946
AccIII	TCCGGA	1 cut(s)	1110
AciI	CCGC	6 cut(s)	1421, 1497, 1560, 1866, 1946, 2060
AclI	AACGTT	2 cut(s)	654, 765
AclWI	GGATC	5 cut(s)	283, 472, 1733, 1767, 1780
AcoI	YGGCCR	5 cut(s)	689, 811, 1182, 1392, 2061
AcsI	RAATTY	3 cut(s)	1671, 1814, 1907
AcuI	CTGAAG	1 cut(s)	1595
AcyI	GRCGYC	1 cut(s)	1725
AdeI	CACNNNGTG	1 cut(s)	1259
AfaI	GTAC	5 cut(s)	337, 605, 1223, 1247, 1943
AfiI	CCNNNNNNNGG	8 cut(s)	520, 586, 1160, 1290, 1753, 1782, 1783, 2119
AgsI	TTSAA	8 cut(s)	290, 400, 620, 701, 751, 1486, 1597, 2056
AjiI	CACGTC	1 cut(s)	1635
AjnI	CCWGG	4 cut(s)	824, 1473, 1926, 2112
Alw21I	GWGCWC	2 cut(s)	1236, 2151
Alw26I	GTCTC	3 cut(s)	535, 1547, 1668
AlwI	GGATC	5 cut(s)	283, 472, 1733, 1767, 1780
Ama87I	CYCGRG	3 cut(s)	356, 513, 799
Aor13HI	TCCGGA	1 cut(s)	1110
ApeKI	GCWGC	3 cut(s)	1333, 1863, 2080
ApoI	RAATTY	3 cut(s)	1671, 1814, 1907
Asp700I	GAANNNNTTC	1 cut(s)	404
AspA2I	CCTAGG	1 cut(s)	851
AspLEI	GCGC	1 cut(s)	1727
AspS9I	GGNCC	4 cut(s)	1085, 1534, 1684, 1762
AsuC2I	CCSGG	1 cut(s)	693
AsuHPI	GGTGA	7 cut(s)	343, 382, 400, 934, 1063, 1437, 2173
AvaI	CYCGRG	3 cut(s)	356, 513, 799
AvaII	GGWCC	2 cut(s)	1534, 1684
AvrII	CCTAGG	1 cut(s)	851
BamHI	GGATCC	1 cut(s)	1772
BanI	GGYRCC	4 cut(s)	727, 1042, 1547, 1724
BanII	GRGCYC	1 cut(s)	2151
BauI	CACGAG	2 cut(s)	1649, 1844
Bbv12I	GWGCWC	2 cut(s)	1236, 2151
BbvCI	CCTCAGC	2 cut(s)	218, 1964
BbvI	GCAGC	3 cut(s)	1345, 1875, 2092
BccI	CCATC	4 cut(s)	537, 580, 953, 1786
BceAI	ACGGC	4 cut(s)	438, 1493, 1556, 1738
BcgI	CGANNNNNNTGC	4 cut(s)	1196, 1230, 1519, 1553
BciT130I	CCWGG	4 cut(s)	826, 1475, 1928, 2114
BclI	TGATCA	1 cut(s)	372
BcnI	CCSGG	1 cut(s)	693
BcoDI	GTCTC	3 cut(s)	535, 1547, 1668
BfaI	CTAG	4 cut(s)	269, 741, 834, 852
BfoI	RGCGCY	1 cut(s)	1728
BglI	GCCNNNNNGGC	1 cut(s)	1505
BisI	GCNGC	5 cut(s)	1334, 1497, 1864, 2061, 2081
BlnI	CCTAGG	1 cut(s)	851
BlsI	GCNGC	5 cut(s)	1335, 1498, 1865, 2062, 2082
BmcAI	AGTACT	1 cut(s)	605
Bme1390I	CCNGG	5 cut(s)	693, 826, 1475, 1928, 2114
Bme18I	GGWCC	2 cut(s)	1534, 1684
BmeT110I	CYCGRG	3 cut(s)	356, 513, 799
BmgBI	CACGTC	1 cut(s)	1635
BmgT120I	GGNCC	4 cut(s)	1085, 1534, 1684, 1762
BmiI	GGNNCC	9 cut(s)	591, 642, 729, 1044, 1086, 1549, 1555, 1726, 1774
BmrFI	CCNGG	5 cut(s)	693, 826, 1475, 1928, 2114
BmrI	ACTGGG	1 cut(s)	443
BmsI	GCATC	8 cut(s)	765, 979, 1044, 1204, 1230, 1833, 1866, 2059
BmuI	ACTGGG	1 cut(s)	443
BoxI	GACNNNNGTC	1 cut(s)	1973
BplI	GAGNNNNNCTC	2 cut(s)	652, 684
BpmI	CTGGAG	1 cut(s)	1910
Bpu10I	CCTNAGC	2 cut(s)	218, 1964
BpuEI	CTTGAG	2 cut(s)	1309, 1801
BpuMI	CCSGG	1 cut(s)	693
Bsa29I	ATCGAT	1 cut(s)	278
BsaBI	GATNNNNATC	2 cut(s)	792, 872
BsaHI	GRCGYC	1 cut(s)	1725
BsaI	GGTCTC	1 cut(s)	1547
BsaWI	WCCGGW	1 cut(s)	1110
BsaXI	ACNNNNNCTCC	2 cut(s)	581, 611
Bsc4I	CCNNNNNNNGG	8 cut(s)	520, 586, 1160, 1290, 1753, 1782, 1783, 2119
Bse118I	RCCGGY	3 cut(s)	1031, 1550, 1879
Bse1I	ACTGG	2 cut(s)	442, 449
Bse3DI	GCAATG	1 cut(s)	1224
Bse8I	GATNNNNATC	2 cut(s)	792, 872
BseAI	TCCGGA	1 cut(s)	1110
BseBI	CCWGG	4 cut(s)	826, 1475, 1928, 2114
BseCI	ATCGAT	1 cut(s)	278
BseGI	GGATG	3 cut(s)	112, 873, 2112
BseJI	GATNNNNATC	2 cut(s)	792, 872
BseLI	CCNNNNNNNGG	8 cut(s)	520, 586, 1160, 1290, 1753, 1782, 1783, 2119
BseMI	GCAATG	1 cut(s)	1224
BseMII	CTCAG	3 cut(s)	177, 232, 1955
BseNI	ACTGG	2 cut(s)	442, 449
BseRI	GAGGAG	3 cut(s)	206, 1420, 1423
BseXI	GCAGC	3 cut(s)	1345, 1875, 2092
BseYI	CCCAGC	1 cut(s)	1403
BsgI	GTGCAG	1 cut(s)	1056
Bsh1236I	CGCG	2 cut(s)	1715, 1946
Bsh1285I	CGRYCG	1 cut(s)	1719
BshNI	GGYRCC	4 cut(s)	727, 1042, 1547, 1724
BshVI	ATCGAT	1 cut(s)	278
BsiEI	CGRYCG	1 cut(s)	1719
BsiHKAI	GWGCWC	2 cut(s)	1236, 2151
BsiHKCI	CYCGRG	3 cut(s)	356, 513, 799
BsiSI	CCGG	8 cut(s)	692, 1032, 1111, 1391, 1527, 1551, 1880, 2088
BslFI	GGGAC	3 cut(s)	130, 807, 964
BslI	CCNNNNNNNGG	8 cut(s)	520, 586, 1160, 1290, 1753, 1782, 1783, 2119
BsmAI	GTCTC	3 cut(s)	535, 1547, 1668
BsmFI	GGGAC	3 cut(s)	130, 807, 964
Bso31I	GGTCTC	1 cut(s)	1547
BsoBI	CYCGRG	3 cut(s)	356, 513, 799
Bsp1286I	GDGCHC	2 cut(s)	1236, 2151
Bsp13I	TCCGGA	1 cut(s)	1110
Bsp1407I	TGTACA	1 cut(s)	1221
Bsp143I	GATC	8 cut(s)	275, 372, 464, 793, 1708, 1716, 1738, 1772
Bsp19I	CCATGG	1 cut(s)	1395
Bsp68I	TCGCGA	1 cut(s)	1715
BspACI	CCGC	6 cut(s)	1421, 1497, 1560, 1866, 1946, 2060
BspCNI	CTCAG	3 cut(s)	178, 231, 1956
BspDI	ATCGAT	1 cut(s)	278
BspEI	TCCGGA	1 cut(s)	1110
BspFNI	CGCG	2 cut(s)	1715, 1946
BspHI	TCATGA	1 cut(s)	417
BspLI	GGNNCC	9 cut(s)	591, 642, 729, 1044, 1086, 1549, 1555, 1726, 1774
BspPI	GGATC	5 cut(s)	283, 472, 1733, 1767, 1780
BspT107I	GGYRCC	4 cut(s)	727, 1042, 1547, 1724
BspTNI	GGTCTC	1 cut(s)	1547
BsrDI	GCAATG	1 cut(s)	1224
BsrFI	RCCGGY	3 cut(s)	1031, 1550, 1879
BsrGI	TGTACA	1 cut(s)	1221
BsrI	ACTGG	2 cut(s)	442, 449
BssAI	RCCGGY	3 cut(s)	1031, 1550, 1879
BssMI	GATC	8 cut(s)	275, 372, 464, 793, 1708, 1716, 1738, 1772
BssNI	GRCGYC	1 cut(s)	1725
BssSI	CACGAG	2 cut(s)	1649, 1844
BssT1I	CCWWGG	3 cut(s)	723, 851, 1395
Bst2BI	CACGAG	2 cut(s)	1649, 1844
Bst2UI	CCWGG	4 cut(s)	826, 1475, 1928, 2114
Bst4CI	ACNGT	9 cut(s)	154, 396, 821, 999, 1016, 1120, 1132, 2131, 2161
Bst6I	CTCTTC	1 cut(s)	1331
BstACI	GRCGYC	1 cut(s)	1725
BstAPI	GCANNNNNTGC	1 cut(s)	907
BstAUI	TGTACA	1 cut(s)	1221
BstDEI	CTNAG	3 cut(s)	186, 218, 1964
BstDSI	CCRYGG	1 cut(s)	1395
BstF5I	GGATG	3 cut(s)	112, 873, 2112
BstFNI	CGCG	2 cut(s)	1715, 1946
BstH2I	RGCGCY	1 cut(s)	1728
BstHHI	GCGC	1 cut(s)	1727
BstKTI	GATC	8 cut(s)	278, 375, 467, 796, 1711, 1719, 1741, 1775
BstMAI	GTCTC	3 cut(s)	535, 1547, 1668
BstMBI	GATC	8 cut(s)	275, 372, 464, 793, 1708, 1716, 1738, 1772
BstMCI	CGRYCG	1 cut(s)	1719
BstMWI	GCNNNNNNNGC	9 cut(s)	907, 1147, 1240, 1400, 1505, 1568, 1849, 1876, 2069
BstNI	CCWGG	4 cut(s)	826, 1475, 1928, 2114
BstNSI	RCATGY	1 cut(s)	1340
BstPAI	GACNNNNGTC	1 cut(s)	1973
BstSCI	CCNGG	5 cut(s)	691, 824, 1473, 1926, 2112
BstUI	CGCG	2 cut(s)	1715, 1946
BstV1I	GCAGC	3 cut(s)	1345, 1875, 2092
BstX2I	RGATCY	2 cut(s)	464, 1772
BstXI	CCANNNNNNTGG	1 cut(s)	1902
BstYI	RGATCY	2 cut(s)	464, 1772
Bsu15I	ATCGAT	1 cut(s)	278
BsuTUI	ATCGAT	1 cut(s)	278
BtgI	CCRYGG	1 cut(s)	1395
BtgZI	GCGATG	2 cut(s)	1889, 2082
BtrI	CACGTC	1 cut(s)	1635
BtsCI	GGATG	3 cut(s)	112, 873, 2112
BtsI	GCAGTG	2 cut(s)	1044, 1911
BtsIMutI	CAGTG	4 cut(s)	995, 1044, 1911, 2127
BtuMI	TCGCGA	1 cut(s)	1715
CciI	TCATGA	1 cut(s)	417
CfoI	GCGC	1 cut(s)	1727
Cfr10I	RCCGGY	3 cut(s)	1031, 1550, 1879
Cfr13I	GGNCC	4 cut(s)	1085, 1534, 1684, 1762
ClaI	ATCGAT	1 cut(s)	278
CseI	GACGC	1 cut(s)	1942
Csp6I	GTAC	5 cut(s)	336, 604, 1222, 1246, 1942
CspCI	CAANNNNNGTGG	2 cut(s)	2116, 2151
CviAII	CATG	7 cut(s)	418, 583, 1337, 1396, 1531, 2102, 2119
CviQI	GTAC	5 cut(s)	336, 604, 1222, 1246, 1942
DdeI	CTNAG	3 cut(s)	186, 218, 1964
DinI	GGCGCC	1 cut(s)	1726
DpnI	GATC	8 cut(s)	277, 374, 466, 795, 1710, 1718, 1740, 1774
DpnII	GATC	8 cut(s)	275, 372, 464, 793, 1708, 1716, 1738, 1772
DraIII	CACNNNGTG	1 cut(s)	1259
DrdI	GACNNNNNNGTC	1 cut(s)	504
DseDI	GACNNNNNNGTC	1 cut(s)	504
EaeI	YGGCCR	5 cut(s)	689, 811, 1182, 1392, 2061
Eam1104I	CTCTTC	1 cut(s)	1331
EarI	CTCTTC	1 cut(s)	1331
EciI	GGCGGA	1 cut(s)	1410
Ecl136II	GAGCTC	1 cut(s)	2149
Eco130I	CCWWGG	3 cut(s)	723, 851, 1395
Eco147I	AGGCCT	2 cut(s)	667, 1313
Eco24I	GRGCYC	1 cut(s)	2151
Eco31I	GGTCTC	1 cut(s)	1547
Eco47I	GGWCC	2 cut(s)	1534, 1684
Eco53kI	GAGCTC	1 cut(s)	2149
Eco57I	CTGAAG	1 cut(s)	1595
Eco88I	CYCGRG	3 cut(s)	356, 513, 799
EcoICRI	GAGCTC	1 cut(s)	2149
EcoRI	GAATTC	1 cut(s)	1671
EcoRII	CCWGG	4 cut(s)	824, 1473, 1926, 2112
EcoT14I	CCWWGG	3 cut(s)	723, 851, 1395
EcoT22I	ATGCAT	1 cut(s)	6
EcoT38I	GRGCYC	1 cut(s)	2151
EgeI	GGCGCC	1 cut(s)	1726
EheI	GGCGCC	1 cut(s)	1726
ErhI	CCWWGG	3 cut(s)	723, 851, 1395
FaeI	CATG	7 cut(s)	421, 586, 1340, 1399, 1534, 2105, 2122
FalI	AAGNNNNNCTT	2 cut(s)	716, 748
FaqI	GGGAC	3 cut(s)	130, 807, 964
FatI	CATG	7 cut(s)	417, 582, 1336, 1395, 1530, 2101, 2118
FauI	CCCGC	2 cut(s)	1859, 1939
FauNDI	CATATG	1 cut(s)	377
FbaI	TGATCA	1 cut(s)	372
FblI	GTMKAC	3 cut(s)	1097, 1206, 1830
Fnu4HI	GCNGC	5 cut(s)	1334, 1497, 1864, 2061, 2081
FokI	GGATG	3 cut(s)	119, 880, 2119
FriOI	GRGCYC	1 cut(s)	2151
Fsp4HI	GCNGC	5 cut(s)	1334, 1497, 1864, 2061, 2081
FspBI	CTAG	4 cut(s)	269, 741, 834, 852
GlaI	GCGC	1 cut(s)	1726
GluI	GCNGC	5 cut(s)	1334, 1497, 1864, 2061, 2081
GsaI	CCCAGC	1 cut(s)	1407
GsuI	CTGGAG	1 cut(s)	1910
HaeII	RGCGCY	1 cut(s)	1728
HapII	CCGG	8 cut(s)	692, 1032, 1111, 1391, 1527, 1551, 1880, 2088
HgaI	GACGC	1 cut(s)	1942
HhaI	GCGC	1 cut(s)	1727
Hin1I	GRCGYC	1 cut(s)	1725
Hin1II	CATG	7 cut(s)	421, 586, 1340, 1399, 1534, 2105, 2122
Hin6I	GCGC	1 cut(s)	1725
HinP1I	GCGC	1 cut(s)	1725
HincII	GTYRAC	3 cut(s)	1207, 1576, 1831
HindII	GTYRAC	3 cut(s)	1207, 1576, 1831
HindIII	AAGCTT	3 cut(s)	224, 969, 1607
HinfI	GANTC	8 cut(s)	405, 873, 1094, 1465, 1523, 1581, 1691, 1835
HpaII	CCGG	8 cut(s)	692, 1032, 1111, 1391, 1527, 1551, 1880, 2088
HphI	GGTGA	7 cut(s)	343, 382, 400, 934, 1063, 1437, 2173
Hpy166II	GTNNAC	6 cut(s)	577, 1098, 1207, 1248, 1576, 1831
Hpy188I	TCNGA	6 cut(s)	483, 983, 1614, 1684, 1958, 2153
Hpy8I	GTNNAC	6 cut(s)	577, 1098, 1207, 1248, 1576, 1831
HpyAV	CCTTC	5 cut(s)	617, 800, 1012, 1056, 2050
HpyCH4III	ACNGT	9 cut(s)	154, 396, 821, 999, 1016, 1120, 1132, 2131, 2161
HpyCH4IV	ACGT	4 cut(s)	8, 654, 765, 1634
HpyF10VI	GCNNNNNNNGC	9 cut(s)	907, 1147, 1240, 1400, 1505, 1568, 1849, 1876, 2069
HpyF3I	CTNAG	3 cut(s)	186, 218, 1964
HpySE526I	ACGT	4 cut(s)	8, 654, 765, 1634
Hsp92I	GRCGYC	1 cut(s)	1725
Hsp92II	CATG	7 cut(s)	421, 586, 1340, 1399, 1534, 2105, 2122
HspAI	GCGC	1 cut(s)	1725
KasI	GGCGCC	1 cut(s)	1724
Kpn2I	TCCGGA	1 cut(s)	1110
Ksp22I	TGATCA	1 cut(s)	372
Kzo9I	GATC	8 cut(s)	275, 372, 464, 793, 1708, 1716, 1738, 1772
LmnI	GCTCC	8 cut(s)	219, 589, 997, 1274, 1559, 1929, 2098, 2146
Lsp1109I	GCAGC	3 cut(s)	1345, 1875, 2092
LweI	GCATC	8 cut(s)	765, 979, 1044, 1204, 1230, 1833, 1866, 2059
MaeI	CTAG	4 cut(s)	269, 741, 834, 852
MaeII	ACGT	4 cut(s)	8, 654, 765, 1634
MaeIII	GTNAC	4 cut(s)	506, 655, 1295, 1996
MalI	GATC	8 cut(s)	277, 374, 466, 795, 1710, 1718, 1740, 1774
MboI	GATC	8 cut(s)	275, 372, 464, 793, 1708, 1716, 1738, 1772
MboII	GAAGA	8 cut(s)	26, 632, 713, 970, 1318, 1373, 1498, 1801
MfeI	CAATTG	1 cut(s)	921
MflI	RGATCY	2 cut(s)	464, 1772
MhlI	GDGCHC	2 cut(s)	1236, 2151
Mly113I	GGCGCC	1 cut(s)	1725
MlyI	GAGTC	3 cut(s)	1103, 1532, 1844
MmeI	TCCRAC	5 cut(s)	442, 579, 941, 1662, 1936
Mph1103I	ATGCAT	1 cut(s)	6
MroI	TCCGGA	1 cut(s)	1110
MroXI	GAANNNNTTC	1 cut(s)	404
MseI	TTAA	6 cut(s)	45, 210, 300, 321, 965, 1341
MslI	CAYNNNNRTG	1 cut(s)	416
MspA1I	CMGCKG	1 cut(s)	1866
MspI	CCGG	8 cut(s)	692, 1032, 1111, 1391, 1527, 1551, 1880, 2088
MspR9I	CCNGG	5 cut(s)	693, 826, 1475, 1928, 2114
MunI	CAATTG	1 cut(s)	921
MvaI	CCWGG	4 cut(s)	826, 1475, 1928, 2114
MvnI	CGCG	2 cut(s)	1715, 1946
MwoI	GCNNNNNNNGC	9 cut(s)	907, 1147, 1240, 1400, 1505, 1568, 1849, 1876, 2069
NarI	GGCGCC	1 cut(s)	1725
NciI	CCSGG	1 cut(s)	693
NcoI	CCATGG	1 cut(s)	1395
NdeI	CATATG	1 cut(s)	377
NdeII	GATC	8 cut(s)	275, 372, 464, 793, 1708, 1716, 1738, 1772
NlaIII	CATG	7 cut(s)	421, 586, 1340, 1399, 1534, 2105, 2122
NlaIV	GGNNCC	9 cut(s)	591, 642, 729, 1044, 1086, 1549, 1555, 1726, 1774
NmeAIII	GCCGAG	4 cut(s)	907, 1295, 1524, 1790
NmuCI	GTSAC	2 cut(s)	506, 1996
NruI	TCGCGA	1 cut(s)	1715
NsiI	ATGCAT	1 cut(s)	6
NspI	RCATGY	1 cut(s)	1340
PagI	TCATGA	1 cut(s)	417
PceI	AGGCCT	2 cut(s)	667, 1313
PcsI	WCGNNNNNNNCGW	4 cut(s)	1725, 1728, 1824, 1950
PdmI	GAANNNNTTC	1 cut(s)	404
PfeI	GAWTC	5 cut(s)	405, 873, 1465, 1581, 1691
PflFI	GACNNNGTC	1 cut(s)	1733
PflMI	CCANNNNNTGG	1 cut(s)	586
PfoI	TCCNGGA	2 cut(s)	1926, 2112
PkrI	GCNGC	5 cut(s)	1335, 1498, 1865, 2062, 2082
Ple19I	CGATCG	1 cut(s)	1719
PleI	GAGTC	3 cut(s)	1102, 1531, 1843
PluTI	GGCGCC	1 cut(s)	1728
PpsI	GAGTC	3 cut(s)	1102, 1531, 1843
PshAI	GACNNNNGTC	1 cut(s)	1973
Psp124BI	GAGCTC	1 cut(s)	2151
Psp1406I	AACGTT	2 cut(s)	654, 765
Psp6I	CCWGG	4 cut(s)	824, 1473, 1926, 2112
PspFI	CCCAGC	1 cut(s)	1403
PspGI	CCWGG	4 cut(s)	824, 1473, 1926, 2112
PspN4I	GGNNCC	9 cut(s)	591, 642, 729, 1044, 1086, 1549, 1555, 1726, 1774
PspPI	GGNCC	4 cut(s)	1085, 1534, 1684, 1762
PsuI	RGATCY	2 cut(s)	464, 1772
PsyI	GACNNNGTC	1 cut(s)	1733
PvuI	CGATCG	1 cut(s)	1719
RruI	TCGCGA	1 cut(s)	1715
RsaI	GTAC	5 cut(s)	337, 605, 1223, 1247, 1943
RsaNI	GTAC	5 cut(s)	336, 604, 1222, 1246, 1942
RseI	CAYNNNNRTG	1 cut(s)	416
SacI	GAGCTC	1 cut(s)	2151
SalI	GTCGAC	2 cut(s)	1205, 1829
SaqAI	TTAA	6 cut(s)	45, 210, 300, 321, 965, 1341
SatI	GCNGC	5 cut(s)	1334, 1497, 1864, 2061, 2081
Sau3AI	GATC	8 cut(s)	275, 372, 464, 793, 1708, 1716, 1738, 1772
Sau96I	GGNCC	4 cut(s)	1085, 1534, 1684, 1762
ScaI	AGTACT	1 cut(s)	605
SchI	GAGTC	3 cut(s)	1103, 1532, 1844
ScrFI	CCNGG	5 cut(s)	693, 826, 1475, 1928, 2114
SduI	GDGCHC	2 cut(s)	1236, 2151
SfaNI	GCATC	8 cut(s)	765, 979, 1044, 1204, 1230, 1833, 1866, 2059
SfoI	GGCGCC	1 cut(s)	1726
SgrDI	CGTCGACG	1 cut(s)	1829
SinI	GGWCC	2 cut(s)	1534, 1684
SmiMI	CAYNNNNRTG	1 cut(s)	416
SmlI	CTYRAG	2 cut(s)	1288, 1780
SmoI	CTYRAG	2 cut(s)	1288, 1780
SseBI	AGGCCT	2 cut(s)	667, 1313
SsiI	CCGC	6 cut(s)	1421, 1497, 1560, 1866, 1946, 2060
SspDI	GGCGCC	1 cut(s)	1724
SspMI	CTAG	4 cut(s)	269, 741, 834, 852
SstI	GAGCTC	1 cut(s)	2151
StuI	AGGCCT	2 cut(s)	667, 1313
StyD4I	CCNGG	5 cut(s)	691, 824, 1473, 1926, 2112
StyI	CCWWGG	3 cut(s)	723, 851, 1395
TaaI	ACNGT	9 cut(s)	154, 396, 821, 999, 1016, 1120, 1132, 2131, 2161
TaiI	ACGT	4 cut(s)	11, 657, 768, 1637
TaqII	GACCGA	1 cut(s)	1529
TatI	WGTACW	3 cut(s)	603, 1221, 1245
TauI	GCSGC	2 cut(s)	1499, 2063
TfiI	GAWTC	5 cut(s)	405, 873, 1465, 1581, 1691
Tru1I	TTAA	6 cut(s)	45, 210, 300, 321, 965, 1341
Tru9I	TTAA	6 cut(s)	45, 210, 300, 321, 965, 1341
TscAI	CASTG	4 cut(s)	1002, 1044, 1918, 2134
TseFI	GTSAC	2 cut(s)	506, 1996
TseI	GCWGC	3 cut(s)	1333, 1863, 2080
Tsp45I	GTSAC	2 cut(s)	506, 1996
TspDTI	ATGAA	2 cut(s)	149, 994
TspGWI	ACGGA	3 cut(s)	585, 1665, 2015
TspRI	CASTG	4 cut(s)	1002, 1044, 1918, 2134
Tth111I	GACNNNGTC	1 cut(s)	1733
Van91I	CCANNNNNTGG	1 cut(s)	586
VpaK11BI	GGWCC	2 cut(s)	1534, 1684
XapI	RAATTY	3 cut(s)	1671, 1814, 1907
XceI	RCATGY	1 cut(s)	1340
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1371, 2042
XmaJI	CCTAGG	1 cut(s)	851
XmiI	GTMKAC	3 cut(s)	1097, 1206, 1830
XmnI	GAANNNNTTC	1 cut(s)	404
XspI	CTAG	4 cut(s)	269, 741, 834, 852
ZrmI	AGTACT	1 cut(s)	605
Zsp2I	ATGCAT	1 cut(s)	6

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.