Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr16

Orthogroup ID

OG0002343

Physical Location & Seq

Genomic Coordinates Forward (+)

3142338 .. 3146840

Gene Structure 4503 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD16G1044300.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2088 bp

ATGGGGATATTGGTGGCGGAGGCGGCAGCGGCAGAGGCACCGTTTCGTTTCCTGAGATGGAATGAGGTGTTTGTGTCGAGCGACAAGGGGCGGAGGGAGGTCCATTACTATCTGAAACGGAGCGACGGCAGCTCAGATCTGGCGGTGGTGGGCAAAGAGAAGAGCTTGCGGCACATGTCCTATCACTATGCGCACCGAATCCGTTCGTTGTTCTCCATGTCTTCGCTCGTTAAGCTCAAGTCTCGCAGAGAGGTCATTGATTGGCTCGATTCCGTCGTTGCAGATACATCATTTCTCAAATCACCCGATTTGGGTGAAAGCGTGTCAGATGGTAAAGATGCTTGCAAGTTGGGGATTGAAATCTTTAAGGATACTGTATTGCGGAAGTTAGGCAAGCATACCACTGAATTTATGTGGTTAGGCTCTCCTTGGACATGCAGGAAAAAACGAAGGCATTATCAATCATTTAGCCGGAATGGCGTTGTAGTTTCAGTTCATGATTTTGTATTTGTTTTAGCAGAGGAAGATAAACGTCTTGTTGCATACTTAGAAGATATGTACGAGGATTCTAGGGGCAACAAGATGGTTGTGGTGCGGTGGTTTCACAAAGTTGATGAGGTTGGTATAGTTTTGCCTCACAATTTTAATGACAGGGAGATTTTCTTTTCTCTTTGTCTTCAAGATCTCAGTATTGAATGCATAGATGGATTAGCTACTGTACTCAGCCCCCAGCATTTTGAGAAATTCAAGAGAGAGGCAACACAAACTCTTTTGAAACCCTTCGTATGCCAGAAGCAATTTGAAAATGACGATGTCCAGCCCTTTGACATTACTCAAGTTCAAGGTTATTGGAAACAGGAGATACTTAGATACATGCACACACTTGCTCCTTCGAAGGCTCATGGAAGTTCTCAACAGCCAGATGAAGGGTTGGAAGCGGAAGAAAATGATGGTGCCAATGGTATCAGACCTAAAAAGAGGCATCATTCTTCACAAAATGATGACATCCGCTTGGAATTCCGTGACTGGAAAGAGTTTCCAGATGCTGTACGTGATGTGGAGAATCTAAGTCAACATGAGACTGATTGCAGAAGTAAAAGCAAATCCTTCTGCCTTGGAAGAGGAGGTTCTTCTGTTTTACCTCATAAAGAGGTGAATAAAAACCCGCAACAGCATTTAGTAGTTGGTTCCCAGGTTGAAGTCCTCTCACAGGACAGTGGCATTAGAGGGTGTTGGTTCAAAGCTTTGATTATCAAAAGGTACAGAGATAAAGTGAAGGTGCAATATCAAGATATTCAGGATGCAGCTGATGCTAAAAAACTTGAGGAATGGATTTTGGCTTCTAGGCTTGCAGCTTCTGATCAATTGGGTCTTCGTACTTTTGGTAGGCCAATTGTTCGGCCATCTCCACCGTCTACCAAAGGCAGAGTTTCATGGGCTGTTGATGTTGGGACTGTTGTGGATGTCTGGTGGAACGATGGATGGTGGGAAGGGATTGTAGTTCAGAAGGAACCTGATGACAGACTGCATGTGTATTTCCCAGGAGAAAAGCGGGTGTTGATTGTTGGTCATGGTGAATTAAGACATTCTCAAGAGTGGTTGGGAATAGGATGGGCTCAGATTAAGGACAGGCCAGAACTTGTGAGCTCAATATCATGTGATTTAGAAACAAAGCAAGTTGTCGGAAAGAGTTCAGATTGCGTGCCAGTGCAATCTGCAGTGTGTGACAGCGAACCCTTGAAGAAAGAAGAAACCGGATGTGATAATTCTGTTCCGCTCGCTGAAAGTGATAAAGATGGAAAGGTTAAAGAACTGGGCAAGGTTCCAGATCTTTTGAAGGATGATCTACTTGCCCAGCTGAAGTGGAAGTCCTCGAGGAAGAGAAGACGTGGTAACGGCAGCTCTGTCCAGAAGCTCCACTGCATTGTTTCTGATGGCAAAAACGCCCGTCGCCTTGTGGGGTCCGGTGCTTGCGAAAGTTTTATGATTTCATCATCTCTGAAAGTAGACCGAGAGAACTGCAAATATTTAGGCGATTCACTTTTCAGTTCTTCTGTTGCGCCTCCGCTAACAAGTTTAGTGATGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Agenet BAH

Protein Analysis

696

Amino Acids

78.84

Weight (kDa)

8.21

Isoelectric Point (pI)

53.56

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
BAH	PF01426	163 - 270	1.3e-11	BAH domain
Agenet	PF05641	396 - 471	3.7e-16	Agenet domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002343)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G68580 AT1G68580 AT1G68580 AT1G68580 AT1G68580
fragaria_vesca	FvH4_4g27610 FvH4_4g27610 FvH4_4g27610 FvH4_4g27610 FvH4_4g27610 FvH4_4g27610 FvH4_4g27610 FvH4_4g27610
malus_domestica	MD13G1043500.v1.1 MD16G1044300.v1.1
prunus_persica	Prupe.1G309000_v2.0.a1 Prupe.1G309000_v2.0.a1 Prupe.1G309000_v2.0.a1
pyrus_communis	pycom13g03830 pycom16g03850
rosa_chinensis	RchiOBHm_Chr3g0482621 RchiOBHm_Chr3g0482631 RchiOBHm_Chr3g0482641 RchiOBHm_Chr4g0435461
rosa_laevigata	RLG00000006591
rosa_multiflora	Rmu_sc0006069.1_g000002 Rmu_sc0015893.1_g000006 Rmu_sc0015893.1_g000007
rosa_roxburghii	Rroxscaffold_3G00234330 Rroxscaffold_5G00376690
rosa_rugosa	Rorug04G0285200
rosa_samantha	Rh3AG248900 Rh3CG281900 Rh3CG282000 Rh3CG282100 Rh3DG278100 Rh4AG340900 Rh4BG349200 Rh4CG363700 Rh4DG343400
rosa_wichuraiana	Rw3G022470 Rw4G029730

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AbsI	CCTCGAGG	1 cut(s)	1873
Acc16I	TGCGCA	1 cut(s)	192
AccB1I	GGYRCC	2 cut(s)	37, 953
AccBSI	CCGCTC	1 cut(s)	1777
AccI	GTMKAC	2 cut(s)	1415, 2007
AcoI	YGGCCR	1 cut(s)	1400
AcsI	RAATTY	3 cut(s)	407, 743, 1016
AcuI	CTGAAG	1 cut(s)	1880
AfaI	GTAC	5 cut(s)	560, 720, 1050, 1262, 1378
AfiI	CCNNNNNNNGG	3 cut(s)	311, 926, 1210
AflIII	ACRYGT	1 cut(s)	174
AjiI	CACGTC	1 cut(s)	1889
AjnI	CCWGG	2 cut(s)	1191, 1540
Alw21I	GWGCWC	1 cut(s)	1649
Alw26I	GTCTC	2 cut(s)	246, 1073
AlwNI	CAGNNNCTG	2 cut(s)	1046, 1358
Ama87I	CYCGRG	1 cut(s)	1873
AoxI	GGCC	3 cut(s)	1388, 1400, 1631
ApeKI	GCWGC	5 cut(s)	26, 129, 1304, 1352, 1899
ApoI	RAATTY	3 cut(s)	407, 743, 1016
Asp700I	GAANNNNTTC	3 cut(s)	202, 779, 1690
AspLEI	GCGC	2 cut(s)	193, 2062
AspS9I	GGNCC	2 cut(s)	100, 1962
AsuHPI	GGTGA	4 cut(s)	294, 326, 1165, 1586
AsuII	TTCGAA	1 cut(s)	893
AvaI	CYCGRG	1 cut(s)	1873
AvaII	GGWCC	2 cut(s)	100, 1962
BanI	GGYRCC	2 cut(s)	37, 953
BanII	GRGCYC	2 cut(s)	1618, 1649
BbsI	GAAGAC	4 cut(s)	213, 668, 1364, 1891
Bbv12I	GWGCWC	1 cut(s)	1649
BbvI	GCAGC	5 cut(s)	38, 141, 1316, 1364, 1911
BceAI	ACGGC	2 cut(s)	142, 1912
BcgI	CGANNNNNNTGC	2 cut(s)	2001, 2035
BciT130I	CCWGG	2 cut(s)	1193, 1542
BciVI	GTATCC	1 cut(s)	364
BclI	TGATCA	1 cut(s)	1360
BcoDI	GTCTC	2 cut(s)	246, 1073
BfaI	CTAG	2 cut(s)	570, 1344
BfmI	CTRYAG	1 cut(s)	1716
BfuI	GTATCC	1 cut(s)	364
BglI	GCCNNNNNGGC	1 cut(s)	477
BglII	AGATCT	3 cut(s)	136, 682, 1828
BisI	GCNGC	8 cut(s)	24, 27, 30, 130, 170, 1305, 1353, 1900
BlsI	GCNGC	8 cut(s)	25, 28, 31, 131, 171, 1306, 1354, 1901
Bme1390I	CCNGG	2 cut(s)	1193, 1542
Bme18I	GGWCC	2 cut(s)	100, 1962
BmeT110I	CYCGRG	1 cut(s)	1873
BmgBI	CACGTC	1 cut(s)	1889
BmgT120I	GGNCC	2 cut(s)	100, 1962
BmiI	GGNNCC	6 cut(s)	39, 955, 1189, 1512, 1824, 1963
BmrFI	CCNGG	2 cut(s)	1193, 1542
BmrI	ACTGGG	1 cut(s)	1823
BmsI	GCATC	5 cut(s)	328, 991, 1033, 1291, 1300
BmuI	ACTGGG	1 cut(s)	1823
BpiI	GAAGAC	4 cut(s)	213, 668, 1364, 1891
Bpu14I	TTCGAA	1 cut(s)	893
BpuEI	CTTGAG	4 cut(s)	221, 819, 1343, 1575
BsaAI	YACGTR	1 cut(s)	1052
BsaBI	GATNNNNATC	1 cut(s)	359
BsaJI	CCNNGG	4 cut(s)	428, 1114, 1191, 1540
BsaWI	WCCGGW	2 cut(s)	1754, 1964
BsaXI	ACNNNNNCTCC	2 cut(s)	871, 901
Bsc4I	CCNNNNNNNGG	3 cut(s)	311, 926, 1210
Bse1I	ACTGG	3 cut(s)	1031, 1706, 1818
Bse8I	GATNNNNATC	1 cut(s)	359
BseBI	CCWGG	2 cut(s)	1193, 1542
BseDI	CCNNGG	4 cut(s)	428, 1114, 1191, 1540
BseGI	GGATG	7 cut(s)	1005, 1306, 1468, 1487, 1616, 1763, 1846
BseJI	GATNNNNATC	1 cut(s)	359
BseLI	CCNNNNNNNGG	3 cut(s)	311, 926, 1210
BseMII	CTCAG	5 cut(s)	44, 147, 700, 736, 1631
BseNI	ACTGG	3 cut(s)	1031, 1706, 1818
BseRI	GAGGAG	1 cut(s)	1137
BseXI	GCAGC	5 cut(s)	38, 141, 1316, 1364, 1911
BseYI	CCCAGC	2 cut(s)	729, 1854
BshFI	GGCC	3 cut(s)	1390, 1402, 1633
BshNI	GGYRCC	2 cut(s)	37, 953
BsiHKAI	GWGCWC	1 cut(s)	1649
BsiHKCI	CYCGRG	1 cut(s)	1873
BsiSI	CCGG	3 cut(s)	472, 1755, 1965
BslFI	GGGAC	1 cut(s)	1465
BslI	CCNNNNNNNGG	3 cut(s)	311, 926, 1210
BsmAI	GTCTC	2 cut(s)	246, 1073
BsmFI	GGGAC	1 cut(s)	1465
BsmI	GAATGC	1 cut(s)	701
BsnI	GGCC	3 cut(s)	1390, 1402, 1633
BsoBI	CYCGRG	1 cut(s)	1873
Bsp119I	TTCGAA	1 cut(s)	893
Bsp1286I	GDGCHC	2 cut(s)	1618, 1649
Bsp143I	GATC	5 cut(s)	136, 682, 1360, 1828, 1843
BspANI	GGCC	3 cut(s)	1390, 1402, 1633
BspCNI	CTCAG	5 cut(s)	45, 146, 699, 735, 1630
BspHI	TCATGA	1 cut(s)	496
BspLI	GGNNCC	6 cut(s)	39, 955, 1189, 1512, 1824, 1963
BspMAI	CTGCAG	1 cut(s)	1720
BspQI	GCTCTTC	1 cut(s)	155
BspT104I	TTCGAA	1 cut(s)	893
BspT107I	GGYRCC	2 cut(s)	37, 953
BsrBI	CCGCTC	1 cut(s)	1777
BsrI	ACTGG	3 cut(s)	1031, 1706, 1818
BssECI	CCNNGG	4 cut(s)	428, 1114, 1191, 1540
BssMI	GATC	5 cut(s)	136, 682, 1360, 1828, 1843
BssT1I	CCWWGG	2 cut(s)	428, 1114
Bst2UI	CCWGG	2 cut(s)	1193, 1542
Bst4CI	ACNGT	6 cut(s)	42, 376, 718, 1217, 1413, 1456
Bst6I	CTCTTC	3 cut(s)	155, 1114, 1874
BstAPI	GCANNNNNTGC	1 cut(s)	1310
BstBAI	YACGTR	1 cut(s)	1052
BstBI	TTCGAA	1 cut(s)	893
BstC8I	GCNNGC	7 cut(s)	167, 343, 395, 1350, 1703, 1779, 1972
BstDEI	CTNAG	8 cut(s)	53, 133, 547, 686, 722, 866, 1067, 1617
BstENI	CCTNNNNNAGG	1 cut(s)	1208
BstF5I	GGATG	7 cut(s)	1005, 1306, 1468, 1487, 1616, 1763, 1846
BstHHI	GCGC	2 cut(s)	193, 2062
BstKTI	GATC	5 cut(s)	139, 685, 1363, 1831, 1846
BstMAI	GTCTC	2 cut(s)	246, 1073
BstMBI	GATC	5 cut(s)	136, 682, 1360, 1828, 1843
BstMWI	GCNNNNNNNGC	7 cut(s)	23, 29, 35, 129, 232, 477, 1310
BstNI	CCWGG	2 cut(s)	1193, 1542
BstNSI	RCATGY	4 cut(s)	178, 438, 877, 1532
BstSCI	CCNGG	2 cut(s)	1191, 1540
BstSFI	CTRYAG	1 cut(s)	1716
BstV1I	GCAGC	5 cut(s)	38, 141, 1316, 1364, 1911
BstV2I	GAAGAC	4 cut(s)	213, 668, 1364, 1891
BstX2I	RGATCY	3 cut(s)	136, 682, 1828
BstYI	RGATCY	3 cut(s)	136, 682, 1828
BsuI	GTATCC	1 cut(s)	364
BsuRI	GGCC	3 cut(s)	1390, 1402, 1633
BtrI	CACGTC	1 cut(s)	1889
BtsCI	GGATG	7 cut(s)	1005, 1306, 1468, 1487, 1616, 1763, 1846
BtsI	GCAGTG	2 cut(s)	1725, 1918
BtsIMutI	CAGTG	5 cut(s)	402, 1222, 1713, 1725, 1918
Cac8I	GCNNGC	7 cut(s)	167, 343, 395, 1350, 1703, 1779, 1972
CaiI	CAGNNNCTG	2 cut(s)	1046, 1358
CciI	TCATGA	1 cut(s)	496
CfoI	GCGC	2 cut(s)	193, 2062
Cfr13I	GGNCC	2 cut(s)	100, 1962
Csp6I	GTAC	5 cut(s)	559, 719, 1049, 1261, 1377
CviQI	GTAC	5 cut(s)	559, 719, 1049, 1261, 1377
DdeI	CTNAG	8 cut(s)	53, 133, 547, 686, 722, 866, 1067, 1617
DpnI	GATC	5 cut(s)	138, 684, 1362, 1830, 1845
DpnII	GATC	5 cut(s)	136, 682, 1360, 1828, 1843
EaeI	YGGCCR	1 cut(s)	1400
Eam1104I	CTCTTC	3 cut(s)	155, 1114, 1874
EarI	CTCTTC	3 cut(s)	155, 1114, 1874
EciI	GGCGGA	2 cut(s)	32, 106
Ecl136II	GAGCTC	1 cut(s)	1647
Eco130I	CCWWGG	2 cut(s)	428, 1114
Eco24I	GRGCYC	2 cut(s)	1618, 1649
Eco47I	GGWCC	2 cut(s)	100, 1962
Eco53kI	GAGCTC	1 cut(s)	1647
Eco57I	CTGAAG	1 cut(s)	1880
Eco88I	CYCGRG	1 cut(s)	1873
EcoICRI	GAGCTC	1 cut(s)	1647
EcoNI	CCTNNNNNAGG	1 cut(s)	1208
EcoRI	GAATTC	1 cut(s)	1016
EcoRII	CCWGG	2 cut(s)	1191, 1540
EcoT14I	CCWWGG	2 cut(s)	428, 1114
EcoT22I	ATGCAT	1 cut(s)	701
EcoT38I	GRGCYC	2 cut(s)	1618, 1649
ErhI	CCWWGG	2 cut(s)	428, 1114
FaqI	GGGAC	1 cut(s)	1465
FauI	CCCGC	2 cut(s)	1173, 1545
FbaI	TGATCA	1 cut(s)	1360
FblI	GTMKAC	2 cut(s)	1415, 2007
Fnu4HI	GCNGC	8 cut(s)	24, 27, 30, 130, 170, 1305, 1353, 1900
FokI	GGATG	7 cut(s)	992, 1313, 1475, 1494, 1623, 1770, 1853
FriOI	GRGCYC	2 cut(s)	1618, 1649
Fsp4HI	GCNGC	8 cut(s)	24, 27, 30, 130, 170, 1305, 1353, 1900
FspAI	RTGCGCAY	1 cut(s)	192
FspBI	CTAG	2 cut(s)	570, 1344
FspI	TGCGCA	1 cut(s)	192
GlaI	GCGC	2 cut(s)	192, 2061
GluI	GCNGC	8 cut(s)	24, 27, 30, 130, 170, 1305, 1353, 1900
GsaI	CCCAGC	2 cut(s)	733, 1858
HaeIII	GGCC	3 cut(s)	1390, 1402, 1633
HapII	CCGG	3 cut(s)	472, 1755, 1965
HhaI	GCGC	2 cut(s)	193, 2062
Hin6I	GCGC	2 cut(s)	191, 2060
HinP1I	GCGC	2 cut(s)	191, 2060
HincII	GTYRAC	1 cut(s)	1073
HindII	GTYRAC	1 cut(s)	1073
HindIII	AAGCTT	1 cut(s)	1242
HinfI	GANTC	5 cut(s)	198, 269, 566, 1063, 2036
HpaII	CCGG	3 cut(s)	472, 1755, 1965
HphI	GGTGA	4 cut(s)	294, 326, 1165, 1586
Hpy166II	GTNNAC	3 cut(s)	1073, 1416, 2008
Hpy8I	GTNNAC	3 cut(s)	1073, 1416, 2008
Hpy99I	CGWCG	3 cut(s)	128, 278, 1953
HpyCH4III	ACNGT	6 cut(s)	42, 376, 718, 1217, 1413, 1456
HpyCH4IV	ACGT	3 cut(s)	532, 1051, 1888
HpyF10VI	GCNNNNNNNGC	7 cut(s)	23, 29, 35, 129, 232, 477, 1310
HpyF3I	CTNAG	8 cut(s)	53, 133, 547, 686, 722, 866, 1067, 1617
HpySE526I	ACGT	3 cut(s)	532, 1051, 1888
HspAI	GCGC	2 cut(s)	191, 2060
Ksp22I	TGATCA	1 cut(s)	1360
Kzo9I	GATC	5 cut(s)	136, 682, 1360, 1828, 1843
LguI	GCTCTTC	1 cut(s)	155
LmnI	GCTCC	3 cut(s)	120, 892, 1920
Lsp1109I	GCAGC	5 cut(s)	38, 141, 1316, 1364, 1911
LweI	GCATC	5 cut(s)	328, 991, 1033, 1291, 1300
MaeI	CTAG	2 cut(s)	570, 1344
MaeII	ACGT	3 cut(s)	532, 1051, 1888
MaeIII	GTNAC	3 cut(s)	1022, 1724, 1892
MalI	GATC	5 cut(s)	138, 684, 1362, 1830, 1845
MbiI	CCGCTC	1 cut(s)	1777
MboI	GATC	5 cut(s)	136, 682, 1360, 1828, 1843
MfeI	CAATTG	2 cut(s)	1364, 1392
MflI	RGATCY	3 cut(s)	136, 682, 1828
MhlI	GDGCHC	2 cut(s)	1618, 1649
MluCI	AATT	9 cut(s)	407, 640, 743, 797, 1016, 1364, 1392, 1577, 1765
MmeI	TCCRAC	2 cut(s)	912, 1663
Mph1103I	ATGCAT	1 cut(s)	701
MroXI	GAANNNNTTC	3 cut(s)	202, 779, 1690
MseI	TTAA	6 cut(s)	231, 366, 645, 1580, 1623, 1806
MspA1I	CMGCKG	3 cut(s)	29, 1307, 1858
MspI	CCGG	3 cut(s)	472, 1755, 1965
MspR9I	CCNGG	2 cut(s)	1193, 1542
MunI	CAATTG	2 cut(s)	1364, 1392
Mva1269I	GAATGC	1 cut(s)	701
MvaI	CCWGG	2 cut(s)	1193, 1542
MwoI	GCNNNNNNNGC	7 cut(s)	23, 29, 35, 129, 232, 477, 1310
NdeII	GATC	5 cut(s)	136, 682, 1360, 1828, 1843
NlaIV	GGNNCC	6 cut(s)	39, 955, 1189, 1512, 1824, 1963
NmuCI	GTSAC	2 cut(s)	1022, 1724
NsbI	TGCGCA	1 cut(s)	192
NsiI	ATGCAT	1 cut(s)	701
NspI	RCATGY	4 cut(s)	178, 438, 877, 1532
NspV	TTCGAA	1 cut(s)	893
PaeR7I	CTCGAG	1 cut(s)	1873
PagI	TCATGA	1 cut(s)	496
PciI	ACATGT	1 cut(s)	174
PciSI	GCTCTTC	1 cut(s)	155
PcsI	WCGNNNNNNNCGW	1 cut(s)	273
PctI	GAATGC	1 cut(s)	701
PdmI	GAANNNNTTC	3 cut(s)	202, 779, 1690
PfeI	GAWTC	5 cut(s)	198, 269, 566, 1063, 2036
PflFI	GACNNNGTC	1 cut(s)	812
PkrI	GCNGC	8 cut(s)	25, 28, 31, 131, 171, 1306, 1354, 1901
Ppu21I	YACGTR	1 cut(s)	1052
PscI	ACATGT	1 cut(s)	174
Psp124BI	GAGCTC	1 cut(s)	1649
Psp6I	CCWGG	2 cut(s)	1191, 1540
PspFI	CCCAGC	2 cut(s)	729, 1854
PspGI	CCWGG	2 cut(s)	1191, 1540
PspN4I	GGNNCC	6 cut(s)	39, 955, 1189, 1512, 1824, 1963
PspPI	GGNCC	2 cut(s)	100, 1962
PspXI	VCTCGAGB	1 cut(s)	1873
PsrI	GAACNNNNNNTAC	2 cut(s)	477, 509
PstI	CTGCAG	1 cut(s)	1720
PstNI	CAGNNNCTG	2 cut(s)	1046, 1358
PsuI	RGATCY	3 cut(s)	136, 682, 1828
PsyI	GACNNNGTC	1 cut(s)	812
PvuII	CAGCTG	2 cut(s)	1307, 1858
RsaI	GTAC	5 cut(s)	560, 720, 1050, 1262, 1378
RsaNI	GTAC	5 cut(s)	559, 719, 1049, 1261, 1377
SacI	GAGCTC	1 cut(s)	1649
SapI	GCTCTTC	1 cut(s)	155
SaqAI	TTAA	6 cut(s)	231, 366, 645, 1580, 1623, 1806
SatI	GCNGC	8 cut(s)	24, 27, 30, 130, 170, 1305, 1353, 1900
Sau3AI	GATC	5 cut(s)	136, 682, 1360, 1828, 1843
Sau96I	GGNCC	2 cut(s)	100, 1962
ScrFI	CCNGG	2 cut(s)	1193, 1542
SduI	GDGCHC	2 cut(s)	1618, 1649
SfaNI	GCATC	5 cut(s)	328, 991, 1033, 1291, 1300
SfcI	CTRYAG	1 cut(s)	1716
Sfr274I	CTCGAG	1 cut(s)	1873
SfuI	TTCGAA	1 cut(s)	893
SinI	GGWCC	2 cut(s)	100, 1962
SlaI	CTCGAG	1 cut(s)	1873
SmlI	CTYRAG	5 cut(s)	236, 834, 1322, 1590, 1873
SmoI	CTYRAG	5 cut(s)	236, 834, 1322, 1590, 1873
Sse9I	AATT	9 cut(s)	407, 640, 743, 797, 1016, 1364, 1392, 1577, 1765
SspI	AATATT	1 cut(s)	2027
SspMI	CTAG	2 cut(s)	570, 1344
SstI	GAGCTC	1 cut(s)	1649
StyD4I	CCNGG	2 cut(s)	1191, 1540
StyI	CCWWGG	2 cut(s)	428, 1114
TaaI	ACNGT	6 cut(s)	42, 376, 718, 1217, 1413, 1456
TaiI	ACGT	3 cut(s)	535, 1054, 1891
TaqI	TCGA	4 cut(s)	77, 267, 893, 1874
TaqII	GACCGA	1 cut(s)	2025
TasI	AATT	9 cut(s)	407, 640, 743, 797, 1016, 1364, 1392, 1577, 1765
TatI	WGTACW	1 cut(s)	718
TauI	GCSGC	3 cut(s)	26, 32, 172
TfiI	GAWTC	5 cut(s)	198, 269, 566, 1063, 2036
Tru1I	TTAA	6 cut(s)	231, 366, 645, 1580, 1623, 1806
Tru9I	TTAA	6 cut(s)	231, 366, 645, 1580, 1623, 1806
TscAI	CASTG	5 cut(s)	409, 1222, 1713, 1725, 1925
TseFI	GTSAC	2 cut(s)	1022, 1724
TseI	GCWGC	5 cut(s)	26, 129, 1304, 1352, 1899
Tsp45I	GTSAC	2 cut(s)	1022, 1724
TspDTI	ATGAA	4 cut(s)	485, 939, 1422, 1980
TspGWI	ACGGA	4 cut(s)	133, 191, 262, 1010
TspRI	CASTG	5 cut(s)	409, 1222, 1713, 1725, 1925
Tth111I	GACNNNGTC	1 cut(s)	812
VpaK11BI	GGWCC	2 cut(s)	100, 1962
XagI	CCTNNNNNAGG	1 cut(s)	1208
XapI	RAATTY	3 cut(s)	407, 743, 1016
XceI	RCATGY	4 cut(s)	178, 438, 877, 1532
XhoI	CTCGAG	1 cut(s)	1873
XmiI	GTMKAC	2 cut(s)	1415, 2007
XmnI	GAANNNNTTC	3 cut(s)	202, 779, 1690
XspI	CTAG	2 cut(s)	570, 1344
Zsp2I	ATGCAT	1 cut(s)	701

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.