Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000005

Orthogroup ID

OG0002343

Physical Location & Seq

Genomic Coordinates Forward (+)

57345900 .. 57350062

Gene Structure 4163 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_5G00376690.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2055 bp

ATGGAGAGATTGGCGAAGGCGGCCACCACGGCGGCGCTGGGGTTCGTGAGGTGGGAGGAGGTGTTTGTGTCCTCCGATAAAGGGCGGAGAGAGGTTCATTACTATCTGAAGCGGAGCGACGGGAGCTCAGATCTGGCTGTGATAGGGAAAGAGAAGAGCTTGAGGCACATGTCCTATCACTATGCCTTTCGAAACCGGTCTTTGTTCCCGGTGTCTTCGCTGGTTAAGCTCAAGTCGCGTAGAGAAGTCGTCGATTGGCTCAAGTCTGTGGTTTCAGATGTGCTGCCTGGAGTACCATCTGGTTTAGATGGAAGCATGTTGGATGGTAAAGATGCTGGCGAGGTGGATATTGAACTTTTGAAGGTTACTCACTTACGGAAGATGGGCCGCTATACTACAGAGTTTATGTGGTTAGGTTCTCCTTTAAGGGAAGGAAAAAACGGAGGCATTACCAATCGTTCAGCCGTTCATGACTTTGTATTTGTTTTAGCAGAGGAGGATAAGCGTCTTGTTGCGTACTTAGAAGATATGTACGAGGACTCTAAGGGTAACAAGATGGTTGTTGTTCGCTGGTTTCACAAAGTTGATGAGGTTGGTATGGTCTTGCCTCTCAATTTTAATGACAGAGAGATTTTCTTTTCTCTCTGTCACCAACATCTCAGTATTGAATGCATTGATGGATTGGCTACTGTCCTCAGCCCTGTGCACTTTGAGAAATTTCTGAAAGAGGCGAAGCAAACACAGCTGGAACCCTTTGTATGTCATAAACAGTTTGAAAATGATGATGTAAAGCCCTTCGACATTACTCAAGTTGAAGGTTATTGGAAACAGGAGATACTTAGATACATGCACACAGTTACCCCTTCAAAGGTTCCCGTCAGTTCTCAACAATCTGTTGATGAGTTGAAAGCGGAAGAAGTTGTTCATGCCAGTGATATCAGACCTAAAAAGAGGCAGCGTTCTTTAAAAGATGATGATATGCATGTTGAAGGTATTGAAAGAAGGGTGTCACTGGGTGCAGCATGTGGGGAAACAGGCTATATAAGTGAAAATGGGACTGATTGTAAAAGTAAAAGTGAAGCCTTCAGCCTTGGTAAGAGAGGTTCTGCTGTTATTTTACCTTGTCCAGAGGTGAAACAAATCCTGCCGCAGTATCTAGCAGTAGGTTCCCAGGTTGAGGTCCTGTCCCAAGATAGTGGCATTAGAGGGTGTTGGTTTAGAGCATTGATTATCAAGAAGCATAAAGATAAAGTTAAGGTGCAATATCAAGATATTCAGGATGCAGCTGATGAAGCTAACAAACTTGAGGAATGGATTTTAGCGTCAAAGATTGCAGATCCTGATCAATTGGGGCTTCGGCTTGCTGATAGGCCATGTATTCGGCCATGTATAAAGTCAAATAAAGGTAGAGTTTCATGGTCTGTTGATGTTGGGAGTGTTGTTGATGTCTGGAGGCATGATGGTTGGTGGGAAGGCATAGTACTTCAGAAGGAATGTGATGACAGACTTCACATATACTTTCCAGGAGAGAATCAGGTTTTGATTGCGGGGCGTAGTGAAGTGCGACATTCTCAAGAGTGGCTGGGGAGAGAGTGGGCTTATATAAAGGACAGGCCAGACCTTGTGGCCTCAATATCAAGTAATTTAGAAACTAAGAAAACTGTTGGAAACTCATTTGATGGCATGTCAGGGCTGTCTGAAATCATTGATAGCAGAGAGTTGAAGAAACATGAAACATCGGCTCTTTCCTCTGATAATGACAAGGATGAAAAAGTAAATGAAGTTGACAAAGTTCCAGATCTTTTGAAGGATGATCTCTTTGCCCAGCTGAAGTGGAAGTCTTCGAGGAAGAGAAGACGTGGTAACGGAAGCTCTGCCCAAAAGTTGCATTTTGGTAGTGATGGTAAAAGCACCTCTGGCCTCATGGGATCCAAATCTTGTGAAAGATATTTGATTACATCGTCTCTTATGGTTGACCACGAGAACTGCAAATATTTAGGGGATTCTCTTTTCAGTTCATCAGTTGGGCCTTCTCTAACAAGCTTAGTTATGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Agenet BAH

Protein Analysis

684

Amino Acids

77.25

Weight (kDa)

6.72

Isoelectric Point (pI)

50.22

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
BAH	PF01426	156 - 262	2.2e-09	BAH domain
Agenet	PF05641	389 - 463	8e-18	Agenet domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002343)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G68580 AT1G68580 AT1G68580 AT1G68580 AT1G68580
fragaria_vesca	FvH4_4g27610 FvH4_4g27610 FvH4_4g27610 FvH4_4g27610 FvH4_4g27610 FvH4_4g27610 FvH4_4g27610 FvH4_4g27610
malus_domestica	MD13G1043500.v1.1 MD16G1044300.v1.1
prunus_persica	Prupe.1G309000_v2.0.a1 Prupe.1G309000_v2.0.a1 Prupe.1G309000_v2.0.a1
pyrus_communis	pycom13g03830 pycom16g03850
rosa_chinensis	RchiOBHm_Chr3g0482621 RchiOBHm_Chr3g0482631 RchiOBHm_Chr3g0482641 RchiOBHm_Chr4g0435461
rosa_laevigata	RLG00000006591
rosa_multiflora	Rmu_sc0006069.1_g000002 Rmu_sc0015893.1_g000006 Rmu_sc0015893.1_g000007
rosa_roxburghii	Rroxscaffold_3G00234330 Rroxscaffold_5G00376690
rosa_rugosa	Rorug04G0285200
rosa_samantha	Rh3AG248900 Rh3CG281900 Rh3CG282000 Rh3CG282100 Rh3DG278100 Rh4AG340900 Rh4BG349200 Rh4CG363700 Rh4DG343400
rosa_wichuraiana	Rw3G022470 Rw4G029730

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccII	CGCG	1 cut(s)	238
AciI	CCGC	8 cut(s)	20, 32, 85, 112, 388, 911, 1148, 1547
AclWI	GGATC	3 cut(s)	1331, 1923, 1936
AcoI	YGGCCR	2 cut(s)	21, 1382
AcsI	RAATTY	1 cut(s)	716
AcuI	CTGAAG	4 cut(s)	128, 1069, 1469, 1850
AdeI	CACNNNGTG	1 cut(s)	1016
AfaI	GTAC	4 cut(s)	294, 518, 533, 1482
AfiI	CCNNNNNNNGG	3 cut(s)	81, 868, 1177
AflIII	ACRYGT	1 cut(s)	168
AgeI	ACCGGT	1 cut(s)	195
AjiI	CACGTC	1 cut(s)	1859
AjnI	CCWGG	3 cut(s)	286, 1170, 1522
AluBI	AGCT	9 cut(s)	126, 159, 229, 745, 1286, 1295, 1828, 1872, 2043
AluI	AGCT	9 cut(s)	126, 159, 229, 745, 1286, 1295, 1828, 1872, 2043
Alw21I	GWGCWC	2 cut(s)	128, 708
Alw26I	GTCTC	1 cut(s)	1968
Alw44I	GTGCAC	1 cut(s)	704
AlwI	GGATC	3 cut(s)	1331, 1923, 1936
AlwNI	CAGNNNCTG	1 cut(s)	1340
AoxI	GGCC	8 cut(s)	21, 385, 1370, 1382, 1613, 1626, 1918, 2027
ApaLI	GTGCAC	1 cut(s)	704
ApeKI	GCWGC	4 cut(s)	283, 955, 1019, 1283
ApoI	RAATTY	1 cut(s)	716
ArsI	GACNNNNNNTTYG	2 cut(s)	464, 496
AsiGI	ACCGGT	1 cut(s)	195
Asp700I	GAANNNNTTC	1 cut(s)	921
AspLEI	GCGC	1 cut(s)	37
AspS9I	GGNCC	3 cut(s)	385, 1180, 2027
AsuC2I	CCSGG	1 cut(s)	209
AsuHPI	GGTGA	2 cut(s)	641, 1144
AsuII	TTCGAA	1 cut(s)	190
AvaII	GGWCC	1 cut(s)	1180
BaeGI	GKGCMC	1 cut(s)	708
BamHI	GGATCC	1 cut(s)	1928
BanII	GRGCYC	1 cut(s)	128
BarI	GAAGNNNNNNTAC	2 cut(s)	1464, 1496
BauI	CACGAG	1 cut(s)	1979
BbsI	GAAGAC	3 cut(s)	207, 1833, 1861
Bbv12I	GWGCWC	2 cut(s)	128, 708
BbvCI	CCTCAGC	1 cut(s)	695
BbvI	GCAGC	4 cut(s)	270, 967, 1031, 1295
BccI	CCATC	9 cut(s)	302, 304, 317, 376, 550, 671, 1454, 1673, 1895
BceAI	ACGGC	2 cut(s)	45, 449
BciT130I	CCWGG	3 cut(s)	288, 1172, 1524
BclI	TGATCA	1 cut(s)	1342
BcnI	CCSGG	1 cut(s)	209
BcoDI	GTCTC	1 cut(s)	1968
BfaI	CTAG	1 cut(s)	1157
BfmI	CTRYAG	1 cut(s)	396
BfoI	RGCGCY	1 cut(s)	38
BglI	GCCNNNNNGGC	1 cut(s)	29
BglII	AGATCT	2 cut(s)	130, 1798
BisI	GCNGC	8 cut(s)	21, 33, 284, 388, 956, 1020, 1148, 1284
BlsI	GCNGC	8 cut(s)	22, 34, 285, 389, 957, 1021, 1149, 1285
BmcAI	AGTACT	1 cut(s)	1482
Bme1390I	CCNGG	4 cut(s)	209, 288, 1172, 1524
Bme18I	GGWCC	1 cut(s)	1180
BmgBI	CACGTC	1 cut(s)	1859
BmgT120I	GGNCC	3 cut(s)	385, 1180, 2027
BmiI	GGNNCC	4 cut(s)	750, 873, 1168, 1930
BmrFI	CCNGG	4 cut(s)	209, 288, 1172, 1524
BmrI	ACTGGG	1 cut(s)	1022
BmsI	GCATC	2 cut(s)	322, 1270
BmuI	ACTGGG	1 cut(s)	1022
BpiI	GAAGAC	3 cut(s)	207, 1833, 1861
BpmI	CTGGAG	2 cut(s)	309, 1471
Bpu10I	CCTNAGC	1 cut(s)	695
Bpu14I	TTCGAA	1 cut(s)	190
BpuEI	CTTGAG	6 cut(s)	181, 215, 245, 792, 1325, 1557
BpuMI	CCSGG	1 cut(s)	209
BsaBI	GATNNNNATC	2 cut(s)	1341, 1933
BsaJI	CCNNGG	3 cut(s)	27, 1090, 1170
BsaWI	WCCGGW	1 cut(s)	195
BsaXI	ACNNNNNCTCC	2 cut(s)	47, 77
Bsc4I	CCNNNNNNNGG	3 cut(s)	81, 868, 1177
Bse118I	RCCGGY	1 cut(s)	195
Bse1I	ACTGG	2 cut(s)	930, 1017
Bse8I	GATNNNNATC	2 cut(s)	1341, 1933
BseBI	CCWGG	3 cut(s)	288, 1172, 1524
BseDI	CCNNGG	3 cut(s)	27, 1090, 1170
BseGI	GGATG	4 cut(s)	328, 1285, 1771, 1816
BseJI	GATNNNNATC	2 cut(s)	1341, 1933
BseLI	CCNNNNNNNGG	3 cut(s)	81, 868, 1177
BseMII	CTCAG	3 cut(s)	141, 673, 709
BseNI	ACTGG	2 cut(s)	930, 1017
BseRI	GAGGAG	2 cut(s)	71, 509
BseSI	GKGCMC	1 cut(s)	708
BseXI	GCAGC	4 cut(s)	270, 967, 1031, 1295
BseYI	CCCAGC	3 cut(s)	37, 1582, 1824
BsgI	GTGCAG	1 cut(s)	1038
Bsh1236I	CGCG	1 cut(s)	238
BshFI	GGCC	8 cut(s)	23, 387, 1372, 1384, 1615, 1628, 1920, 2029
BshTI	ACCGGT	1 cut(s)	195
BsiHKAI	GWGCWC	2 cut(s)	128, 708
BsiSI	CCGG	2 cut(s)	196, 209
BslFI	GGGAC	2 cut(s)	1069, 1171
BslI	CCNNNNNNNGG	3 cut(s)	81, 868, 1177
BsmAI	GTCTC	1 cut(s)	1968
BsmBI	CGTCTC	1 cut(s)	1968
BsmFI	GGGAC	2 cut(s)	1069, 1171
BsmI	GAATGC	1 cut(s)	674
BsnI	GGCC	8 cut(s)	23, 387, 1372, 1384, 1615, 1628, 1920, 2029
Bsp119I	TTCGAA	1 cut(s)	190
Bsp1286I	GDGCHC	2 cut(s)	128, 708
Bsp143I	GATC	6 cut(s)	130, 1336, 1342, 1798, 1813, 1928
BspACI	CCGC	8 cut(s)	20, 32, 85, 112, 388, 911, 1148, 1547
BspANI	GGCC	8 cut(s)	23, 387, 1372, 1384, 1615, 1628, 1920, 2029
BspCNI	CTCAG	3 cut(s)	140, 672, 708
BspFNI	CGCG	1 cut(s)	238
BspHI	TCATGA	1 cut(s)	469
BspLI	GGNNCC	4 cut(s)	750, 873, 1168, 1930
BspPI	GGATC	3 cut(s)	1331, 1923, 1936
BspQI	GCTCTTC	1 cut(s)	149
BspT104I	TTCGAA	1 cut(s)	190
BsrFI	RCCGGY	1 cut(s)	195
BsrI	ACTGG	2 cut(s)	930, 1017
BssAI	RCCGGY	1 cut(s)	195
BssECI	CCNNGG	3 cut(s)	27, 1090, 1170
BssMI	GATC	6 cut(s)	130, 1336, 1342, 1798, 1813, 1928
BssSI	CACGAG	1 cut(s)	1979
BssT1I	CCWWGG	1 cut(s)	1090
Bst2BI	CACGAG	1 cut(s)	1979
Bst2UI	CCWGG	3 cut(s)	288, 1172, 1524
Bst4CI	ACNGT	4 cut(s)	691, 771, 856, 1663
Bst6I	CTCTTC	2 cut(s)	149, 1844
BstBI	TTCGAA	1 cut(s)	190
BstC8I	GCNNGC	2 cut(s)	337, 1362
BstDEI	CTNAG	8 cut(s)	127, 520, 543, 659, 695, 839, 1653, 2044
BstDSI	CCRYGG	1 cut(s)	27
BstF5I	GGATG	4 cut(s)	328, 1285, 1771, 1816
BstFNI	CGCG	1 cut(s)	238
BstH2I	RGCGCY	1 cut(s)	38
BstHHI	GCGC	1 cut(s)	37
BstKTI	GATC	6 cut(s)	133, 1339, 1345, 1801, 1816, 1931
BstMAI	GTCTC	1 cut(s)	1968
BstMBI	GATC	6 cut(s)	130, 1336, 1342, 1798, 1813, 1928
BstMWI	GCNNNNNNNGC	8 cut(s)	20, 29, 123, 226, 235, 742, 1292, 1917
BstNI	CCWGG	3 cut(s)	288, 1172, 1524
BstNSI	RCATGY	6 cut(s)	172, 319, 850, 986, 1026, 1687
BstSCI	CCNGG	4 cut(s)	207, 286, 1170, 1522
BstSFI	CTRYAG	1 cut(s)	396
BstSLI	GKGCMC	1 cut(s)	708
BstUI	CGCG	1 cut(s)	238
BstV1I	GCAGC	4 cut(s)	270, 967, 1031, 1295
BstV2I	GAAGAC	3 cut(s)	207, 1833, 1861
BstX2I	RGATCY	4 cut(s)	130, 1336, 1798, 1928
BstXI	CCANNNNNNTGG	1 cut(s)	1196
BstYI	RGATCY	4 cut(s)	130, 1336, 1798, 1928
BsuRI	GGCC	8 cut(s)	23, 387, 1372, 1384, 1615, 1628, 1920, 2029
BtgI	CCRYGG	1 cut(s)	27
BtrI	CACGTC	1 cut(s)	1859
BtsCI	GGATG	4 cut(s)	328, 1285, 1771, 1816
BtsIMutI	CAGTG	2 cut(s)	937, 1010
Cac8I	GCNNGC	2 cut(s)	337, 1362
CaiI	CAGNNNCTG	1 cut(s)	1340
CciI	TCATGA	1 cut(s)	469
CfoI	GCGC	1 cut(s)	37
Cfr10I	RCCGGY	1 cut(s)	195
Cfr13I	GGNCC	3 cut(s)	385, 1180, 2027
CseI	GACGC	2 cut(s)	494, 1311
Csp6I	GTAC	4 cut(s)	293, 517, 532, 1481
CspAI	ACCGGT	1 cut(s)	195
CviQI	GTAC	4 cut(s)	293, 517, 532, 1481
DdeI	CTNAG	8 cut(s)	127, 520, 543, 659, 695, 839, 1653, 2044
DpnI	GATC	6 cut(s)	132, 1338, 1344, 1800, 1815, 1930
DpnII	GATC	6 cut(s)	130, 1336, 1342, 1798, 1813, 1928
DraI	TTTAAA	1 cut(s)	966
DraIII	CACNNNGTG	1 cut(s)	1016
EaeI	YGGCCR	2 cut(s)	21, 1382
Eam1104I	CTCTTC	2 cut(s)	149, 1844
EarI	CTCTTC	2 cut(s)	149, 1844
EciI	GGCGGA	1 cut(s)	100
Ecl136II	GAGCTC	1 cut(s)	126
Eco130I	CCWWGG	1 cut(s)	1090
Eco24I	GRGCYC	1 cut(s)	128
Eco32I	GATATC	1 cut(s)	937
Eco47I	GGWCC	1 cut(s)	1180
Eco53kI	GAGCTC	1 cut(s)	126
Eco57I	CTGAAG	4 cut(s)	128, 1069, 1469, 1850
EcoICRI	GAGCTC	1 cut(s)	126
EcoO109I	RGGNCCY	1 cut(s)	1180
EcoRII	CCWGG	3 cut(s)	286, 1170, 1522
EcoRV	GATATC	1 cut(s)	937
EcoT14I	CCWWGG	1 cut(s)	1090
EcoT22I	ATGCAT	2 cut(s)	674, 984
EcoT38I	GRGCYC	1 cut(s)	128
ErhI	CCWWGG	1 cut(s)	1090
Esp3I	CGTCTC	1 cut(s)	1968
FaqI	GGGAC	2 cut(s)	1069, 1171
FauI	CCCGC	1 cut(s)	1540
FbaI	TGATCA	1 cut(s)	1342
Fnu4HI	GCNGC	8 cut(s)	21, 33, 284, 388, 956, 1020, 1148, 1284
FokI	GGATG	4 cut(s)	335, 1292, 1778, 1823
FriOI	GRGCYC	1 cut(s)	128
Fsp4HI	GCNGC	8 cut(s)	21, 33, 284, 388, 956, 1020, 1148, 1284
FspBI	CTAG	1 cut(s)	1157
GlaI	GCGC	1 cut(s)	36
GluI	GCNGC	8 cut(s)	21, 33, 284, 388, 956, 1020, 1148, 1284
GsaI	CCCAGC	3 cut(s)	41, 1586, 1828
GsuI	CTGGAG	2 cut(s)	309, 1471
HaeII	RGCGCY	1 cut(s)	38
HaeIII	GGCC	8 cut(s)	23, 387, 1372, 1384, 1615, 1628, 1920, 2029
HapII	CCGG	2 cut(s)	196, 209
HgaI	GACGC	2 cut(s)	494, 1311
HhaI	GCGC	1 cut(s)	37
Hin6I	GCGC	1 cut(s)	35
HinP1I	GCGC	1 cut(s)	35
HincII	GTYRAC	2 cut(s)	1786, 1975
HindII	GTYRAC	2 cut(s)	1786, 1975
HindIII	AAGCTT	1 cut(s)	2041
HinfI	GANTC	3 cut(s)	539, 1531, 2003
HpaII	CCGG	2 cut(s)	196, 209
HphI	GGTGA	2 cut(s)	641, 1144
Hpy166II	GTNNAC	3 cut(s)	706, 1786, 1975
Hpy188I	TCNGA	9 cut(s)	76, 108, 130, 277, 723, 941, 1488, 1699, 1753
Hpy8I	GTNNAC	3 cut(s)	706, 1786, 1975
Hpy99I	CGWCG	2 cut(s)	122, 254
HpyCH4III	ACNGT	4 cut(s)	691, 771, 856, 1663
HpyCH4IV	ACGT	1 cut(s)	1858
HpyF10VI	GCNNNNNNNGC	8 cut(s)	20, 29, 123, 226, 235, 742, 1292, 1917
HpyF3I	CTNAG	8 cut(s)	127, 520, 543, 659, 695, 839, 1653, 2044
HpySE526I	ACGT	1 cut(s)	1858
HspAI	GCGC	1 cut(s)	35
Ksp22I	TGATCA	1 cut(s)	1342
Kzo9I	GATC	6 cut(s)	130, 1336, 1342, 1798, 1813, 1928
LguI	GCTCTTC	1 cut(s)	149
LmnI	GCTCC	2 cut(s)	114, 123
Lsp1109I	GCAGC	4 cut(s)	270, 967, 1031, 1295
LweI	GCATC	2 cut(s)	322, 1270
MaeI	CTAG	1 cut(s)	1157
MaeII	ACGT	1 cut(s)	1858
MaeIII	GTNAC	6 cut(s)	364, 548, 647, 856, 1008, 1862
MalI	GATC	6 cut(s)	132, 1338, 1344, 1800, 1815, 1930
MboI	GATC	6 cut(s)	130, 1336, 1342, 1798, 1813, 1928
MboII	GAAGA	9 cut(s)	166, 207, 391, 536, 926, 1735, 1833, 1861, 1866
MfeI	CAATTG	1 cut(s)	1346
MflI	RGATCY	4 cut(s)	130, 1336, 1798, 1928
MhlI	GDGCHC	2 cut(s)	128, 708
MluCI	AATT	4 cut(s)	613, 716, 1346, 1642
MlyI	GAGTC	1 cut(s)	533
MmeI	TCCRAC	2 cut(s)	300, 1645
Mph1103I	ATGCAT	2 cut(s)	674, 984
MroXI	GAANNNNTTC	1 cut(s)	921
MseI	TTAA	5 cut(s)	225, 425, 618, 965, 1254
MslI	CAYNNNNRTG	1 cut(s)	930
MspA1I	CMGCKG	3 cut(s)	745, 1286, 1828
MspI	CCGG	2 cut(s)	196, 209
MspR9I	CCNGG	4 cut(s)	209, 288, 1172, 1524
MunI	CAATTG	1 cut(s)	1346
Mva1269I	GAATGC	1 cut(s)	674
MvaI	CCWGG	3 cut(s)	288, 1172, 1524
MvnI	CGCG	1 cut(s)	238
MwoI	GCNNNNNNNGC	8 cut(s)	20, 29, 123, 226, 235, 742, 1292, 1917
NciI	CCSGG	1 cut(s)	209
NdeII	GATC	6 cut(s)	130, 1336, 1342, 1798, 1813, 1928
NlaIV	GGNNCC	4 cut(s)	750, 873, 1168, 1930
NmuCI	GTSAC	2 cut(s)	647, 1008
NsiI	ATGCAT	2 cut(s)	674, 984
NspI	RCATGY	6 cut(s)	172, 319, 850, 986, 1026, 1687
NspV	TTCGAA	1 cut(s)	190
PagI	TCATGA	1 cut(s)	469
PciI	ACATGT	1 cut(s)	168
PciSI	GCTCTTC	1 cut(s)	149
PctI	GAATGC	1 cut(s)	674
PdmI	GAANNNNTTC	1 cut(s)	921
PfeI	GAWTC	2 cut(s)	1531, 2003
PfoI	TCCNGGA	1 cut(s)	1522
PinAI	ACCGGT	1 cut(s)	195
PkrI	GCNGC	8 cut(s)	22, 34, 285, 389, 957, 1021, 1149, 1285
PleI	GAGTC	1 cut(s)	533
PpsI	GAGTC	1 cut(s)	533
PpuMI	RGGWCCY	1 cut(s)	1180
PscI	ACATGT	1 cut(s)	168
Psp124BI	GAGCTC	1 cut(s)	128
Psp5II	RGGWCCY	1 cut(s)	1180
Psp6I	CCWGG	3 cut(s)	286, 1170, 1522
PspFI	CCCAGC	3 cut(s)	37, 1582, 1824
PspGI	CCWGG	3 cut(s)	286, 1170, 1522
PspN4I	GGNNCC	4 cut(s)	750, 873, 1168, 1930
PspPI	GGNCC	3 cut(s)	385, 1180, 2027
PspPPI	RGGWCCY	1 cut(s)	1180
PsrI	GAACNNNNNNTAC	2 cut(s)	1087, 1119
PstNI	CAGNNNCTG	1 cut(s)	1340
PsuI	RGATCY	4 cut(s)	130, 1336, 1798, 1928
PvuII	CAGCTG	3 cut(s)	745, 1286, 1828
RsaI	GTAC	4 cut(s)	294, 518, 533, 1482
RsaNI	GTAC	4 cut(s)	293, 517, 532, 1481
RseI	CAYNNNNRTG	1 cut(s)	930
SacI	GAGCTC	1 cut(s)	128
SapI	GCTCTTC	1 cut(s)	149
SaqAI	TTAA	5 cut(s)	225, 425, 618, 965, 1254
SatI	GCNGC	8 cut(s)	21, 33, 284, 388, 956, 1020, 1148, 1284
Sau3AI	GATC	6 cut(s)	130, 1336, 1342, 1798, 1813, 1928
Sau96I	GGNCC	3 cut(s)	385, 1180, 2027
ScaI	AGTACT	1 cut(s)	1482
SchI	GAGTC	1 cut(s)	533
ScrFI	CCNGG	4 cut(s)	209, 288, 1172, 1524
SduI	GDGCHC	2 cut(s)	128, 708
SfaNI	GCATC	2 cut(s)	322, 1270
SfcI	CTRYAG	1 cut(s)	396
SfuI	TTCGAA	1 cut(s)	190
SinI	GGWCC	1 cut(s)	1180
SmiMI	CAYNNNNRTG	1 cut(s)	930
SmlI	CTYRAG	6 cut(s)	160, 230, 260, 807, 1304, 1572
SmoI	CTYRAG	6 cut(s)	160, 230, 260, 807, 1304, 1572
Sse9I	AATT	4 cut(s)	613, 716, 1346, 1642
SsiI	CCGC	8 cut(s)	20, 32, 85, 112, 388, 911, 1148, 1547
SspI	AATATT	1 cut(s)	1994
SspMI	CTAG	1 cut(s)	1157
SstI	GAGCTC	1 cut(s)	128
StyD4I	CCNGG	4 cut(s)	207, 286, 1170, 1522
StyI	CCWWGG	1 cut(s)	1090
TaaI	ACNGT	4 cut(s)	691, 771, 856, 1663
TaiI	ACGT	1 cut(s)	1861
TaqI	TCGA	4 cut(s)	190, 252, 798, 1844
TasI	AATT	4 cut(s)	613, 716, 1346, 1642
TatI	WGTACW	1 cut(s)	1480
TauI	GCSGC	4 cut(s)	23, 35, 390, 1150
TfiI	GAWTC	2 cut(s)	1531, 2003
Tru1I	TTAA	5 cut(s)	225, 425, 618, 965, 1254
Tru9I	TTAA	5 cut(s)	225, 425, 618, 965, 1254
TscAI	CASTG	2 cut(s)	937, 1017
TseFI	GTSAC	2 cut(s)	647, 1008
TseI	GCWGC	4 cut(s)	283, 955, 1019, 1283
Tsp45I	GTSAC	2 cut(s)	647, 1008
TspDTI	ATGAA	9 cut(s)	86, 458, 914, 1305, 1404, 1746, 1782, 1794, 2007
TspGWI	ACGGA	3 cut(s)	391, 456, 1881
TspRI	CASTG	2 cut(s)	937, 1017
VneI	GTGCAC	1 cut(s)	704
VpaK11BI	GGWCC	1 cut(s)	1180
XapI	RAATTY	1 cut(s)	716
XceI	RCATGY	6 cut(s)	172, 319, 850, 986, 1026, 1687
XcmI	CCANNNNNNNNNTGG	1 cut(s)	34
XmnI	GAANNNNTTC	1 cut(s)	921
XspI	CTAG	1 cut(s)	1157
ZrmI	AGTACT	1 cut(s)	1482
Zsp2I	ATGCAT	2 cut(s)	674, 984

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.