Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0002948

Physical Location & Seq

Genomic Coordinates Forward (+)

11082661 .. 11088977

Gene Structure 6317 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G140800.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1398 bp

ATGATTGCCATGAAGTCGTTTGACCCCATTAACCCCATGATGACTCCGCAACTAATCATTGGGCTTCACATGTGGGTGAATGACCAACTCCTTGCAAGTCCTTTTCTTGGGTCTCCCTCAACAGTCTTAACACGTTGCCAACCACCGCGAGCGTCTCCAAAACGGTGCGTTTCGGTCATCTACGGCTGGTCGCTCACCGTAACCGGCACAGTTCGACAGCCGTCGGAGCTCCGAAGCCGCGGGGTGAGTGACATGGAGAAAAGGAGATGGTTGGTATTTGTAGTATTTACATGGATGTTTGTTTTTTCTGCTGGAAGAGAACTGAAAATTAAGCACAAGGATCATGGCCCTGTCTATAATCATACGCTTGCCACTATATTAGTGCGGTACGCTTCCACGGTGTATTTATCAGATTTGACAGAGCTGTTTACTTGGACATGCTCAAGATGTGACGGTTTGATTAAGGATTTTGAAATGATTGAGCTGGTTGTTGACATCCAGCATTGCTTACAGGCTTTTGTTGGAGTGGCACAAGATCCCAATGCCATCATAATTGCATTTAGAGGGACTCAGGAACACAGCATACAGAATTGGGTTGAAGATTTATTTTGGAAACAGCTTGATTTAGATTACCCTGGCATGCCTGATGCAATGGTATTTATTACAGTAAAGTTTCTCTACTCTGTTGCTTGCTGGAATATAAAGTTTCAAGTCTCAATTCTTTTTCTATTGCTTCAGGTGCACCATGGGTTTTTTAACGCTTACCACAACACAACCATACGCCCTGGAATTTTAAATGCTATTGCAAGAGCTAAGGAGTTCTATGGAGATATCGACATCATAGTTACAGGTCATTCAATGGGTGGGGCAATGGCTTCATTTTGTGCTCTTGATCTAAGGGTCAATCAGAAAGAGAGAAATGTTCAAGTTATGACATTTGGACAACCTCGTATTGGTAATGCAGCTTTTGCATCCTACTTTAGCGAACTTGTGCCAAATACTATACGAGTTACAAATGAACATGATATGGTTCCTCATTTGCCTCCATACTATACTTATTTTCCTCAGAAGACATACCACCACTTCCCAAGAGAGGTGTGGCTTTATAACGTTGGAATTGAAAGTCTTGTTTATGAGGTTGAGAAGATCTGTGATGATTCTGGCGAGGACCCAACCTGCAGCAGGTCGGTGAGTGGGAACAGCATTTCAGACCATCTAGTTTATTTTGGTGTTGAATTAATGGCGAAGACATGGAGACGGTGTAGAATTGTGATGGGTCCTGGGGTAGTGGAATACAGCAGAACAGATCTTGGAGGAAATTTTGTACTGTCCAGAGATCTTGCAACTCCTGTTCTAAACTTGAATGCAATGTCAGAAGCTGGGGCAAAACCTCTGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Lipase_3

Protein Analysis

466

Amino Acids

52.76

Weight (kDa)

6.73

Isoelectric Point (pI)

38.62

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002948)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G18630 AT5G18630 AT5G18630 AT5G18640 AT5G18640 AT5G18640 AT5G18640 AT5G18640
fragaria_vesca	FvH4_1g25590 FvH4_1g25590 FvH4_4g17380 FvH4_4g17380 FvH4_4g17380
malus_domestica	MD13G1172600.v1.1 MD16G1174000.v1.1
prunus_persica	Prupe.1G140800_v2.0.a1
pyrus_communis	pycom13g14820 pycom16g14570
rosa_chinensis	RchiOBHm_Chr2g0123761 RchiOBHm_Chr4g0421311
rosa_laevigata	RLG00000007698 RLG00000018774
rosa_multiflora	Rmu_sc0001032.1_g000004 Rmu_sc0004892.1_g000011
rosa_roxburghii	Rroxscaffold_2G00120370 Rroxscaffold_5G00363540
rosa_rugosa	Rorug02G0247600 Rorug04G0169100
rosa_samantha	Rh2AG306700 Rh2BG315200 Rh2CG293100 Rh2DG330400 Rh4AG230700 Rh4BG233700 Rh4CG244900 Rh4DG229400
rosa_wichuraiana	Rw2G024610 Rw4G020310

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1107
Acc36I	ACCTGC	2 cut(s)	1173, 1184
AccII	CGCG	2 cut(s)	148, 240
AciI	CCGC	5 cut(s)	47, 146, 238, 240, 385
AclI	AACGTT	1 cut(s)	1110
AclWI	GGATC	2 cut(s)	348, 530
AcsI	RAATTY	2 cut(s)	789, 1318
AcuI	CTGAAG	1 cut(s)	719
AfaI	GTAC	2 cut(s)	389, 1326
AfiI	CCNNNNNNNGG	4 cut(s)	107, 953, 1093, 1182
AflIII	ACRYGT	2 cut(s)	69, 131
AgsI	TTSAA	8 cut(s)	473, 599, 710, 858, 926, 1121, 1235, 1363
AjnI	CCWGG	3 cut(s)	634, 784, 1279
AluBI	AGCT	7 cut(s)	229, 424, 484, 619, 812, 965, 1379
AluI	AGCT	7 cut(s)	229, 424, 484, 619, 812, 965, 1379
Alw21I	GWGCWC	3 cut(s)	231, 744, 889
Alw26I	GTCTC	4 cut(s)	117, 159, 718, 1249
Alw44I	GTGCAC	1 cut(s)	740
AlwI	GGATC	2 cut(s)	348, 530
AlwNI	CAGNNNCTG	1 cut(s)	1379
AoxI	GGCC	1 cut(s)	346
ApaLI	GTGCAC	1 cut(s)	740
ApeKI	GCWGC	2 cut(s)	962, 1179
ApoI	RAATTY	2 cut(s)	789, 1318
AseI	ATTAAT	1 cut(s)	1238
AspS9I	GGNCC	3 cut(s)	347, 1168, 1277
AsuHPI	GGTGA	4 cut(s)	88, 187, 256, 1201
AvaII	GGWCC	2 cut(s)	1168, 1277
BaeGI	GKGCMC	1 cut(s)	744
BanII	GRGCYC	1 cut(s)	231
BbsI	GAAGAC	2 cut(s)	1076, 1253
Bbv12I	GWGCWC	3 cut(s)	231, 744, 889
BbvI	GCAGC	2 cut(s)	974, 1191
BccI	CCATC	4 cut(s)	261, 554, 1221, 1267
BceAI	ACGGC	2 cut(s)	199, 205
BciT130I	CCWGG	3 cut(s)	636, 786, 1281
BcoDI	GTCTC	4 cut(s)	117, 159, 718, 1249
BfaI	CTAG	1 cut(s)	1217
BfmI	CTRYAG	2 cut(s)	1177, 1394
BfuAI	ACCTGC	2 cut(s)	1173, 1184
BglII	AGATCT	3 cut(s)	1146, 1306, 1336
BisI	GCNGC	3 cut(s)	238, 963, 1180
BlsI	GCNGC	3 cut(s)	239, 964, 1181
Bme1390I	CCNGG	3 cut(s)	636, 786, 1281
Bme18I	GGWCC	2 cut(s)	1168, 1277
BmgT120I	GGNCC	3 cut(s)	347, 1168, 1277
BmiI	GGNNCC	3 cut(s)	1032, 1170, 1278
BmrFI	CCNGG	3 cut(s)	636, 786, 1281
BmsI	GCATC	2 cut(s)	637, 980
BoxI	GACNNNNGTC	1 cut(s)	220
BpiI	GAAGAC	2 cut(s)	1076, 1253
Bpu10I	CCTNAGC	1 cut(s)	813
BpuEI	CTTGAG	1 cut(s)	427
BsaI	GGTCTC	1 cut(s)	117
BsaJI	CCNNGG	6 cut(s)	238, 396, 634, 745, 784, 1280
BsaXI	ACNNNNNCTCC	2 cut(s)	1246, 1276
Bsc4I	CCNNNNNNNGG	4 cut(s)	107, 953, 1093, 1182
Bse118I	RCCGGY	1 cut(s)	203
Bse3DI	GCAATG	4 cut(s)	502, 657, 876, 1374
BseBI	CCWGG	3 cut(s)	636, 786, 1281
BseDI	CCNNGG	6 cut(s)	238, 396, 634, 745, 784, 1280
BseGI	GGATG	3 cut(s)	300, 495, 971
BseLI	CCNNNNNNNGG	4 cut(s)	107, 953, 1093, 1182
BseMI	GCAATG	4 cut(s)	502, 657, 876, 1374
BseMII	CTCAG	2 cut(s)	584, 1079
BseSI	GKGCMC	1 cut(s)	744
BseXI	GCAGC	2 cut(s)	974, 1191
BseYI	CCCAGC	1 cut(s)	1379
Bsh1236I	CGCG	2 cut(s)	148, 240
BshFI	GGCC	1 cut(s)	348
BsiHKAI	GWGCWC	3 cut(s)	231, 744, 889
BsiSI	CCGG	1 cut(s)	204
BslFI	GGGAC	1 cut(s)	580
BslI	CCNNNNNNNGG	4 cut(s)	107, 953, 1093, 1182
BsmAI	GTCTC	4 cut(s)	117, 159, 718, 1249
BsmBI	CGTCTC	2 cut(s)	159, 1249
BsmFI	GGGAC	1 cut(s)	580
BsmI	GAATGC	1 cut(s)	1369
BsnI	GGCC	1 cut(s)	348
Bso31I	GGTCTC	1 cut(s)	117
Bsp1286I	GDGCHC	3 cut(s)	231, 744, 889
Bsp143I	GATC	6 cut(s)	340, 535, 892, 1146, 1306, 1336
Bsp19I	CCATGG	1 cut(s)	745
BspACI	CCGC	5 cut(s)	47, 146, 238, 240, 385
BspANI	GGCC	1 cut(s)	348
BspCNI	CTCAG	2 cut(s)	583, 1078
BspFNI	CGCG	2 cut(s)	148, 240
BspLI	GGNNCC	3 cut(s)	1032, 1170, 1278
BspMAI	CTGCAG	1 cut(s)	1181
BspMI	ACCTGC	2 cut(s)	1173, 1184
BspPI	GGATC	2 cut(s)	348, 530
BspTNI	GGTCTC	1 cut(s)	117
BsrDI	GCAATG	4 cut(s)	502, 657, 876, 1374
BsrFI	RCCGGY	1 cut(s)	203
BssAI	RCCGGY	1 cut(s)	203
BssECI	CCNNGG	6 cut(s)	238, 396, 634, 745, 784, 1280
BssMI	GATC	6 cut(s)	340, 535, 892, 1146, 1306, 1336
BssT1I	CCWWGG	1 cut(s)	745
Bst2UI	CCWGG	3 cut(s)	636, 786, 1281
Bst4CI	ACNGT	9 cut(s)	124, 165, 199, 211, 400, 455, 667, 1260, 1329
Bst6I	CTCTTC	1 cut(s)	310
BstAPI	GCANNNNNTGC	1 cut(s)	968
BstC8I	GCNNGC	4 cut(s)	150, 369, 641, 691
BstDEI	CTNAG	4 cut(s)	570, 813, 896, 1065
BstDSI	CCRYGG	3 cut(s)	238, 396, 745
BstENI	CCTNNNNNAGG	1 cut(s)	1180
BstF5I	GGATG	3 cut(s)	300, 495, 971
BstFNI	CGCG	2 cut(s)	148, 240
BstKTI	GATC	6 cut(s)	343, 538, 895, 1149, 1309, 1339
BstMAI	GTCTC	4 cut(s)	117, 159, 718, 1249
BstMBI	GATC	6 cut(s)	340, 535, 892, 1146, 1306, 1336
BstMWI	GCNNNNNNNGC	3 cut(s)	226, 739, 968
BstNI	CCWGG	3 cut(s)	636, 786, 1281
BstNSI	RCATGY	3 cut(s)	73, 441, 643
BstPAI	GACNNNNGTC	1 cut(s)	220
BstSCI	CCNGG	3 cut(s)	634, 784, 1279
BstSFI	CTRYAG	2 cut(s)	1177, 1394
BstSLI	GKGCMC	1 cut(s)	744
BstUI	CGCG	2 cut(s)	148, 240
BstV1I	GCAGC	2 cut(s)	974, 1191
BstV2I	GAAGAC	2 cut(s)	1076, 1253
BstX2I	RGATCY	4 cut(s)	535, 1146, 1306, 1336
BstYI	RGATCY	4 cut(s)	535, 1146, 1306, 1336
BsuRI	GGCC	1 cut(s)	348
BtgI	CCRYGG	3 cut(s)	238, 396, 745
BtsCI	GGATG	3 cut(s)	300, 495, 971
BveI	ACCTGC	2 cut(s)	1173, 1184
Cac8I	GCNNGC	4 cut(s)	150, 369, 641, 691
CaiI	CAGNNNCTG	1 cut(s)	1379
Cfr10I	RCCGGY	1 cut(s)	203
Cfr13I	GGNCC	3 cut(s)	347, 1168, 1277
Cfr42I	CCGCGG	1 cut(s)	241
CseI	GACGC	1 cut(s)	141
Csp6I	GTAC	2 cut(s)	388, 1325
CviQI	GTAC	2 cut(s)	388, 1325
DdeI	CTNAG	4 cut(s)	570, 813, 896, 1065
DpnI	GATC	6 cut(s)	342, 537, 894, 1148, 1308, 1338
DpnII	GATC	6 cut(s)	340, 535, 892, 1146, 1306, 1336
DraI	TTTAAA	1 cut(s)	795
Eam1104I	CTCTTC	1 cut(s)	310
EarI	CTCTTC	1 cut(s)	310
Ecl136II	GAGCTC	1 cut(s)	229
Eco130I	CCWWGG	1 cut(s)	745
Eco24I	GRGCYC	1 cut(s)	231
Eco31I	GGTCTC	1 cut(s)	117
Eco32I	GATATC	1 cut(s)	832
Eco47I	GGWCC	2 cut(s)	1168, 1277
Eco53kI	GAGCTC	1 cut(s)	229
Eco57I	CTGAAG	1 cut(s)	719
EcoICRI	GAGCTC	1 cut(s)	229
EcoNI	CCTNNNNNAGG	1 cut(s)	1180
EcoO109I	RGGNCCY	2 cut(s)	1168, 1277
EcoRII	CCWGG	3 cut(s)	634, 784, 1279
EcoRV	GATATC	1 cut(s)	832
EcoT14I	CCWWGG	1 cut(s)	745
EcoT38I	GRGCYC	1 cut(s)	231
ErhI	CCWWGG	1 cut(s)	745
Esp3I	CGTCTC	2 cut(s)	159, 1249
FaqI	GGGAC	1 cut(s)	580
FauI	CCCGC	1 cut(s)	233
Fnu4HI	GCNGC	3 cut(s)	238, 963, 1180
FokI	GGATG	3 cut(s)	307, 482, 958
FriOI	GRGCYC	1 cut(s)	231
Fsp4HI	GCNGC	3 cut(s)	238, 963, 1180
FspBI	CTAG	1 cut(s)	1217
GluI	GCNGC	3 cut(s)	238, 963, 1180
GsaI	CCCAGC	1 cut(s)	1383
HaeIII	GGCC	1 cut(s)	348
HapII	CCGG	1 cut(s)	204
HgaI	GACGC	1 cut(s)	141
HincII	GTYRAC	1 cut(s)	493
HindII	GTYRAC	1 cut(s)	493
HinfI	GANTC	3 cut(s)	43, 568, 1157
HpaII	CCGG	1 cut(s)	204
HphI	GGTGA	4 cut(s)	88, 187, 256, 1201
Hpy166II	GTNNAC	3 cut(s)	429, 493, 742
Hpy188I	TCNGA	7 cut(s)	226, 233, 412, 909, 1068, 1210, 1375
Hpy188III	TCNNGA	4 cut(s)	444, 572, 890, 1332
Hpy8I	GTNNAC	3 cut(s)	429, 493, 742
Hpy99I	CGWCG	1 cut(s)	226
HpyCH4III	ACNGT	9 cut(s)	124, 165, 199, 211, 400, 455, 667, 1260, 1329
HpyCH4IV	ACGT	2 cut(s)	133, 1110
HpyF10VI	GCNNNNNNNGC	3 cut(s)	226, 739, 968
HpyF3I	CTNAG	4 cut(s)	570, 813, 896, 1065
HpySE526I	ACGT	2 cut(s)	133, 1110
KspI	CCGCGG	1 cut(s)	241
Kzo9I	GATC	6 cut(s)	340, 535, 892, 1146, 1306, 1336
LmnI	GCTCC	2 cut(s)	226, 234
Lsp1109I	GCAGC	2 cut(s)	974, 1191
LweI	GCATC	2 cut(s)	637, 980
MaeI	CTAG	1 cut(s)	1217
MaeII	ACGT	2 cut(s)	133, 1110
MaeIII	GTNAC	5 cut(s)	199, 248, 449, 844, 1009
MalI	GATC	6 cut(s)	342, 537, 894, 1148, 1308, 1338
MboI	GATC	6 cut(s)	340, 535, 892, 1146, 1306, 1336
MboII	GAAGA	5 cut(s)	327, 611, 1081, 1156, 1258
MflI	RGATCY	4 cut(s)	535, 1146, 1306, 1336
MhlI	GDGCHC	3 cut(s)	231, 744, 889
MluCI	AATT	9 cut(s)	327, 552, 589, 717, 789, 1116, 1235, 1266, 1318
MlyI	GAGTC	2 cut(s)	37, 562
MmeI	TCCRAC	3 cut(s)	204, 502, 1093
MseI	TTAA	7 cut(s)	30, 128, 330, 462, 756, 794, 1238
MslI	CAYNNNNRTG	1 cut(s)	74
MspA1I	CMGCKG	1 cut(s)	240
MspI	CCGG	1 cut(s)	204
MspR9I	CCNGG	3 cut(s)	636, 786, 1281
Mva1269I	GAATGC	1 cut(s)	1369
MvaI	CCWGG	3 cut(s)	636, 786, 1281
MvnI	CGCG	2 cut(s)	148, 240
MwoI	GCNNNNNNNGC	3 cut(s)	226, 739, 968
NcoI	CCATGG	1 cut(s)	745
NdeII	GATC	6 cut(s)	340, 535, 892, 1146, 1306, 1336
NlaIV	GGNNCC	3 cut(s)	1032, 1170, 1278
NmuCI	GTSAC	2 cut(s)	248, 449
NspI	RCATGY	3 cut(s)	73, 441, 643
PaeI	GCATGC	1 cut(s)	643
PciI	ACATGT	1 cut(s)	69
PctI	GAATGC	1 cut(s)	1369
PfeI	GAWTC	1 cut(s)	1157
PkrI	GCNGC	3 cut(s)	239, 964, 1181
PleI	GAGTC	2 cut(s)	37, 562
PpsI	GAGTC	2 cut(s)	37, 562
PpuMI	RGGWCCY	2 cut(s)	1168, 1277
PscI	ACATGT	1 cut(s)	69
PshAI	GACNNNNGTC	1 cut(s)	220
PshBI	ATTAAT	1 cut(s)	1238
PsiI	TTATAA	1 cut(s)	1107
Psp124BI	GAGCTC	1 cut(s)	231
Psp1406I	AACGTT	1 cut(s)	1110
Psp5II	RGGWCCY	2 cut(s)	1168, 1277
Psp6I	CCWGG	3 cut(s)	634, 784, 1279
PspFI	CCCAGC	1 cut(s)	1379
PspGI	CCWGG	3 cut(s)	634, 784, 1279
PspN4I	GGNNCC	3 cut(s)	1032, 1170, 1278
PspPI	GGNCC	3 cut(s)	347, 1168, 1277
PspPPI	RGGWCCY	2 cut(s)	1168, 1277
PsrI	GAACNNNNNNTAC	2 cut(s)	567, 599
PstI	CTGCAG	1 cut(s)	1181
PstNI	CAGNNNCTG	1 cut(s)	1379
PsuI	RGATCY	4 cut(s)	535, 1146, 1306, 1336
RsaI	GTAC	2 cut(s)	389, 1326
RsaNI	GTAC	2 cut(s)	388, 1325
RseI	CAYNNNNRTG	1 cut(s)	74
SacI	GAGCTC	1 cut(s)	231
SacII	CCGCGG	1 cut(s)	241
SaqAI	TTAA	7 cut(s)	30, 128, 330, 462, 756, 794, 1238
SatI	GCNGC	3 cut(s)	238, 963, 1180
Sau3AI	GATC	6 cut(s)	340, 535, 892, 1146, 1306, 1336
Sau96I	GGNCC	3 cut(s)	347, 1168, 1277
SchI	GAGTC	2 cut(s)	37, 562
ScrFI	CCNGG	3 cut(s)	636, 786, 1281
SduI	GDGCHC	3 cut(s)	231, 744, 889
SfaNI	GCATC	2 cut(s)	637, 980
SfcI	CTRYAG	2 cut(s)	1177, 1394
Sfr303I	CCGCGG	1 cut(s)	241
SgrBI	CCGCGG	1 cut(s)	241
SinI	GGWCC	2 cut(s)	1168, 1277
SmiMI	CAYNNNNRTG	1 cut(s)	74
SmlI	CTYRAG	1 cut(s)	442
SmoI	CTYRAG	1 cut(s)	442
SphI	GCATGC	1 cut(s)	643
Sse9I	AATT	9 cut(s)	327, 552, 589, 717, 789, 1116, 1235, 1266, 1318
SsiI	CCGC	5 cut(s)	47, 146, 238, 240, 385
SspMI	CTAG	1 cut(s)	1217
SstI	GAGCTC	1 cut(s)	231
StyD4I	CCNGG	3 cut(s)	634, 784, 1279
StyI	CCWWGG	1 cut(s)	745
TaaI	ACNGT	9 cut(s)	124, 165, 199, 211, 400, 455, 667, 1260, 1329
TaiI	ACGT	2 cut(s)	136, 1113
TaqI	TCGA	2 cut(s)	214, 834
TaqII	GACCGA	1 cut(s)	163
TasI	AATT	9 cut(s)	327, 552, 589, 717, 789, 1116, 1235, 1266, 1318
TatI	WGTACW	1 cut(s)	1324
TauI	GCSGC	1 cut(s)	240
TfiI	GAWTC	1 cut(s)	1157
Tru1I	TTAA	7 cut(s)	30, 128, 330, 462, 756, 794, 1238
Tru9I	TTAA	7 cut(s)	30, 128, 330, 462, 756, 794, 1238
TseFI	GTSAC	2 cut(s)	248, 449
TseI	GCWGC	2 cut(s)	962, 1179
Tsp45I	GTSAC	2 cut(s)	248, 449
TspDTI	ATGAA	3 cut(s)	26, 867, 1032
VneI	GTGCAC	1 cut(s)	740
VpaK11BI	GGWCC	2 cut(s)	1168, 1277
VspI	ATTAAT	1 cut(s)	1238
XagI	CCTNNNNNAGG	1 cut(s)	1180
XapI	RAATTY	2 cut(s)	789, 1318
XceI	RCATGY	3 cut(s)	73, 441, 643
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1095
XspI	CTAG	1 cut(s)	1217

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.