RNA binding
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G21660 AT2G21660 |
| fragaria_vesca | FvH4_2g08880 FvH4_2g08880 FvH4_2g08880 FvH4_2g08880 |
| malus_domestica | MD10G1075500.v1.1 |
| prunus_persica | Prupe.1G176300_v2.0.a1 Prupe.2G011900_v2.0.a1 Prupe.3G163600_v2.0.a1 Prupe.5G141500_v2.0.a1 Prupe.7G178900_v2.0.a1 Prupe.8G096400_v2.0.a1 Prupe.8G096400_v2.0.a1 Prupe.8G096400_v2.0.a1 Prupe.8G096400_v2.0.a1 Prupe.8G096400_v2.0.a1 Prupe.8G096400_v2.0.a1 Prupe.8G096400_v2.0.a1 |
| pyrus_communis | pycom05g05700 pycom10g05900 |
| rosa_chinensis | RchiOBHm_Chr6g0264491 RchiOBHm_Chr7g0233551 |
| rosa_multiflora | Rmu_sc0004946.1_g000027 |
| rosa_roxburghii | Rroxscaffold_176G00431830 |
| rosa_rugosa | Rorug06G0013300 |
| rosa_samantha | Rh6AG132700 Rh6BG130100 Rh6CG128400 Rh6DG115500 |
| rosa_wichuraiana | Rw0G020850 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 190 |
| Acc65I | GGTACC | 1 cut(s) | 25 |
| AccB1I | GGYRCC | 1 cut(s) | 25 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 19 |
| AcsI | RAATTY | 1 cut(s) | 46 |
| AcuI | CTGAAG | 1 cut(s) | 202 |
| AfaI | GTAC | 1 cut(s) | 27 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 19 |
| AgsI | TTSAA | 3 cut(s) | 46, 52, 85 |
| AjnI | CCWGG | 3 cut(s) | 12, 119, 194 |
| AluBI | AGCT | 1 cut(s) | 102 |
| AluI | AGCT | 1 cut(s) | 102 |
| Alw26I | GTCTC | 1 cut(s) | 176 |
| AoxI | GGCC | 2 cut(s) | 123, 150 |
| ApoI | RAATTY | 1 cut(s) | 46 |
| ArsI | GACNNNNNNTTYG | 1 cut(s) | 252 |
| Asp718I | GGTACC | 1 cut(s) | 25 |
| AspS9I | GGNCC | 2 cut(s) | 123, 192 |
| AsuHPI | GGTGA | 1 cut(s) | 205 |
| AvaII | GGWCC | 1 cut(s) | 192 |
| BanI | GGYRCC | 1 cut(s) | 25 |
| BanII | GRGCYC | 1 cut(s) | 117 |
| BciT130I | CCWGG | 3 cut(s) | 14, 121, 196 |
| BclI | TGATCA | 1 cut(s) | 165 |
| BcoDI | GTCTC | 1 cut(s) | 176 |
| Bme1390I | CCNGG | 3 cut(s) | 14, 121, 196 |
| Bme18I | GGWCC | 1 cut(s) | 192 |
| BmgT120I | GGNCC | 2 cut(s) | 123, 192 |
| BmiI | GGNNCC | 1 cut(s) | 27 |
| BmrFI | CCNGG | 3 cut(s) | 14, 121, 196 |
| BmrI | ACTGGG | 1 cut(s) | 195 |
| BmsI | GCATC | 2 cut(s) | 127, 232 |
| BmuI | ACTGGG | 1 cut(s) | 195 |
| BpmI | CTGGAG | 1 cut(s) | 164 |
| BsaJI | CCNNGG | 3 cut(s) | 12, 120, 195 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 19 |
| Bse1I | ACTGG | 2 cut(s) | 147, 190 |
| Bse3DI | GCAATG | 1 cut(s) | 229 |
| BseBI | CCWGG | 3 cut(s) | 14, 121, 196 |
| BseDI | CCNNGG | 3 cut(s) | 12, 120, 195 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 19 |
| BseMI | GCAATG | 1 cut(s) | 229 |
| BseNI | ACTGG | 2 cut(s) | 147, 190 |
| Bsh1285I | CGRYCG | 2 cut(s) | 178, 278 |
| BshFI | GGCC | 2 cut(s) | 125, 152 |
| BshNI | GGYRCC | 1 cut(s) | 25 |
| BsiEI | CGRYCG | 2 cut(s) | 178, 278 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 19 |
| BsmAI | GTCTC | 1 cut(s) | 176 |
| BsnI | GGCC | 2 cut(s) | 125, 152 |
| Bsp1286I | GDGCHC | 1 cut(s) | 117 |
| Bsp143I | GATC | 1 cut(s) | 165 |
| BspANI | GGCC | 2 cut(s) | 125, 152 |
| BspLI | GGNNCC | 1 cut(s) | 27 |
| BspT107I | GGYRCC | 1 cut(s) | 25 |
| BsrDI | GCAATG | 1 cut(s) | 229 |
| BsrI | ACTGG | 2 cut(s) | 147, 190 |
| BssECI | CCNNGG | 3 cut(s) | 12, 120, 195 |
| BssMI | GATC | 1 cut(s) | 165 |
| Bst2UI | CCWGG | 3 cut(s) | 14, 121, 196 |
| Bst4CI | ACNGT | 2 cut(s) | 179, 276 |
| Bst6I | CTCTTC | 1 cut(s) | 95 |
| BstC8I | GCNNGC | 1 cut(s) | 117 |
| BstDEI | CTNAG | 1 cut(s) | 98 |
| BstKTI | GATC | 1 cut(s) | 168 |
| BstMAI | GTCTC | 1 cut(s) | 176 |
| BstMBI | GATC | 1 cut(s) | 165 |
| BstMCI | CGRYCG | 2 cut(s) | 178, 278 |
| BstNI | CCWGG | 3 cut(s) | 14, 121, 196 |
| BstNSI | RCATGY | 1 cut(s) | 43 |
| BstSCI | CCNGG | 3 cut(s) | 12, 119, 194 |
| BsuRI | GGCC | 2 cut(s) | 125, 152 |
| BtsIMutI | CAGTG | 1 cut(s) | 140 |
| Cac8I | GCNNGC | 1 cut(s) | 117 |
| Cfr13I | GGNCC | 2 cut(s) | 123, 192 |
| Csp6I | GTAC | 1 cut(s) | 26 |
| CviAII | CATG | 3 cut(s) | 40, 235, 254 |
| CviJI | RGCY | 7 cut(s) | 17, 102, 115, 125, 152, 201, 207 |
| CviKI_1 | RGCY | 7 cut(s) | 17, 102, 115, 125, 152, 201, 207 |
| CviQI | GTAC | 1 cut(s) | 26 |
| DdeI | CTNAG | 1 cut(s) | 98 |
| DpnI | GATC | 1 cut(s) | 167 |
| DpnII | GATC | 1 cut(s) | 165 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 190 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 190 |
| Eam1104I | CTCTTC | 1 cut(s) | 95 |
| EarI | CTCTTC | 1 cut(s) | 95 |
| Eco147I | AGGCCT | 1 cut(s) | 152 |
| Eco24I | GRGCYC | 1 cut(s) | 117 |
| Eco47I | GGWCC | 1 cut(s) | 192 |
| Eco57I | CTGAAG | 1 cut(s) | 202 |
| EcoRII | CCWGG | 3 cut(s) | 12, 119, 194 |
| EcoT38I | GRGCYC | 1 cut(s) | 117 |
| FaeI | CATG | 3 cut(s) | 43, 238, 257 |
| FaiI | YATR | 3 cut(s) | 41, 236, 255 |
| FatI | CATG | 3 cut(s) | 39, 234, 253 |
| FbaI | TGATCA | 1 cut(s) | 165 |
| FriOI | GRGCYC | 1 cut(s) | 117 |
| GsuI | CTGGAG | 1 cut(s) | 164 |
| HaeIII | GGCC | 2 cut(s) | 125, 152 |
| Hin1II | CATG | 3 cut(s) | 43, 238, 257 |
| HindIII | AAGCTT | 1 cut(s) | 100 |
| HphI | GGTGA | 1 cut(s) | 205 |
| Hpy99I | CGWCG | 1 cut(s) | 276 |
| HpyAV | CCTTC | 3 cut(s) | 142, 226, 243 |
| HpyCH4III | ACNGT | 2 cut(s) | 179, 276 |
| HpyCH4V | TGCA | 1 cut(s) | 140 |
| HpyF3I | CTNAG | 1 cut(s) | 98 |
| Hsp92II | CATG | 3 cut(s) | 43, 238, 257 |
| KpnI | GGTACC | 1 cut(s) | 29 |
| Ksp22I | TGATCA | 1 cut(s) | 165 |
| Kzo9I | GATC | 1 cut(s) | 165 |
| LpnPI | CCDG | 9 cut(s) | 26, 42, 106, 128, 133, 171, 181, 208, 276 |
| LweI | GCATC | 2 cut(s) | 127, 232 |
| MaeIII | GTNAC | 1 cut(s) | 211 |
| MalI | GATC | 1 cut(s) | 167 |
| MboI | GATC | 1 cut(s) | 165 |
| MboII | GAAGA | 2 cut(s) | 74, 82 |
| MhlI | GDGCHC | 1 cut(s) | 117 |
| MluCI | AATT | 2 cut(s) | 46, 74 |
| MmeI | TCCRAC | 1 cut(s) | 88 |
| MnlI | CCTC | 2 cut(s) | 104, 183 |
| MspR9I | CCNGG | 3 cut(s) | 14, 121, 196 |
| MvaI | CCWGG | 3 cut(s) | 14, 121, 196 |
| NdeII | GATC | 1 cut(s) | 165 |
| NlaIII | CATG | 3 cut(s) | 43, 238, 257 |
| NlaIV | GGNNCC | 1 cut(s) | 27 |
| NmuCI | GTSAC | 1 cut(s) | 211 |
| NspI | RCATGY | 1 cut(s) | 43 |
| PceI | AGGCCT | 1 cut(s) | 152 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 19 |
| Psp6I | CCWGG | 3 cut(s) | 12, 119, 194 |
| PspGI | CCWGG | 3 cut(s) | 12, 119, 194 |
| PspN4I | GGNNCC | 1 cut(s) | 27 |
| PspPI | GGNCC | 2 cut(s) | 123, 192 |
| RsaI | GTAC | 1 cut(s) | 27 |
| RsaNI | GTAC | 1 cut(s) | 26 |
| Sau3AI | GATC | 1 cut(s) | 165 |
| Sau96I | GGNCC | 2 cut(s) | 123, 192 |
| ScrFI | CCNGG | 3 cut(s) | 14, 121, 196 |
| SduI | GDGCHC | 1 cut(s) | 117 |
| SetI | ASST | 3 cut(s) | 104, 194, 218 |
| SfaNI | GCATC | 2 cut(s) | 127, 232 |
| SinI | GGWCC | 1 cut(s) | 192 |
| Sse9I | AATT | 2 cut(s) | 46, 74 |
| SseBI | AGGCCT | 1 cut(s) | 152 |
| StuI | AGGCCT | 1 cut(s) | 152 |
| StyD4I | CCNGG | 3 cut(s) | 12, 119, 194 |
| TaaI | ACNGT | 2 cut(s) | 179, 276 |
| TaqI | TCGA | 1 cut(s) | 271 |
| TasI | AATT | 2 cut(s) | 46, 74 |
| TscAI | CASTG | 1 cut(s) | 147 |
| TseFI | GTSAC | 1 cut(s) | 211 |
| Tsp45I | GTSAC | 1 cut(s) | 211 |
| TspDTI | ATGAA | 2 cut(s) | 82, 270 |
| TspRI | CASTG | 1 cut(s) | 147 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 19 |
| VpaK11BI | GGWCC | 1 cut(s) | 192 |
| XapI | RAATTY | 1 cut(s) | 46 |
| XceI | RCATGY | 1 cut(s) | 43 |