RNA binding
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G21660 AT2G21660 |
| fragaria_vesca | FvH4_2g08880 FvH4_2g08880 FvH4_2g08880 FvH4_2g08880 |
| malus_domestica | MD10G1075500.v1.1 |
| prunus_persica | Prupe.1G176300_v2.0.a1 Prupe.2G011900_v2.0.a1 Prupe.3G163600_v2.0.a1 Prupe.5G141500_v2.0.a1 Prupe.7G178900_v2.0.a1 Prupe.8G096400_v2.0.a1 Prupe.8G096400_v2.0.a1 Prupe.8G096400_v2.0.a1 Prupe.8G096400_v2.0.a1 Prupe.8G096400_v2.0.a1 Prupe.8G096400_v2.0.a1 Prupe.8G096400_v2.0.a1 |
| pyrus_communis | pycom05g05700 pycom10g05900 |
| rosa_chinensis | RchiOBHm_Chr6g0264491 RchiOBHm_Chr7g0233551 |
| rosa_multiflora | Rmu_sc0004946.1_g000027 |
| rosa_roxburghii | Rroxscaffold_176G00431830 |
| rosa_rugosa | Rorug06G0013300 |
| rosa_samantha | Rh6AG132700 Rh6BG130100 Rh6CG128400 Rh6DG115500 |
| rosa_wichuraiana | Rw0G020850 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 145 |
| AcsI | RAATTY | 1 cut(s) | 17 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 184 |
| AgsI | TTSAA | 1 cut(s) | 175 |
| Alw26I | GTCTC | 1 cut(s) | 131 |
| AoxI | GGCC | 2 cut(s) | 84, 186 |
| ApeKI | GCWGC | 1 cut(s) | 43 |
| ApoI | RAATTY | 1 cut(s) | 17 |
| AsuHPI | GGTGA | 1 cut(s) | 113 |
| BauI | CACGAG | 1 cut(s) | 179 |
| BbvI | GCAGC | 1 cut(s) | 55 |
| BcoDI | GTCTC | 1 cut(s) | 131 |
| BfaI | CTAG | 2 cut(s) | 150, 220 |
| BisI | GCNGC | 1 cut(s) | 44 |
| BlsI | GCNGC | 1 cut(s) | 45 |
| BmrI | ACTGGG | 1 cut(s) | 45 |
| BmuI | ACTGGG | 1 cut(s) | 45 |
| BsaI | GGTCTC | 1 cut(s) | 131 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 184 |
| Bse1I | ACTGG | 1 cut(s) | 51 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 184 |
| BseMII | CTCAG | 1 cut(s) | 92 |
| BseNI | ACTGG | 1 cut(s) | 51 |
| BseXI | GCAGC | 1 cut(s) | 55 |
| Bsh1285I | CGRYCG | 2 cut(s) | 133, 204 |
| BshFI | GGCC | 2 cut(s) | 86, 188 |
| BsiEI | CGRYCG | 2 cut(s) | 133, 204 |
| BslFI | GGGAC | 1 cut(s) | 209 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 184 |
| BsmAI | GTCTC | 1 cut(s) | 131 |
| BsmFI | GGGAC | 1 cut(s) | 209 |
| BsnI | GGCC | 2 cut(s) | 86, 188 |
| Bso31I | GGTCTC | 1 cut(s) | 131 |
| Bsp143I | GATC | 3 cut(s) | 105, 120, 201 |
| BspANI | GGCC | 2 cut(s) | 86, 188 |
| BspCNI | CTCAG | 1 cut(s) | 91 |
| BspTNI | GGTCTC | 1 cut(s) | 131 |
| BsrI | ACTGG | 1 cut(s) | 51 |
| BssMI | GATC | 3 cut(s) | 105, 120, 201 |
| BssSI | CACGAG | 1 cut(s) | 179 |
| Bst2BI | CACGAG | 1 cut(s) | 179 |
| Bst4CI | ACNGT | 2 cut(s) | 27, 134 |
| BstC8I | GCNNGC | 2 cut(s) | 6, 41 |
| BstDEI | CTNAG | 1 cut(s) | 78 |
| BstKTI | GATC | 3 cut(s) | 108, 123, 204 |
| BstMAI | GTCTC | 1 cut(s) | 131 |
| BstMBI | GATC | 3 cut(s) | 105, 120, 201 |
| BstMCI | CGRYCG | 2 cut(s) | 133, 204 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 216 |
| BstV1I | GCAGC | 1 cut(s) | 55 |
| BsuRI | GGCC | 2 cut(s) | 86, 188 |
| Cac8I | GCNNGC | 2 cut(s) | 6, 41 |
| CviJI | RGCY | 6 cut(s) | 39, 86, 156, 162, 188, 219 |
| CviKI_1 | RGCY | 6 cut(s) | 39, 86, 156, 162, 188, 219 |
| DdeI | CTNAG | 1 cut(s) | 78 |
| DpnI | GATC | 3 cut(s) | 107, 122, 203 |
| DpnII | GATC | 3 cut(s) | 105, 120, 201 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 145 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 145 |
| Eco147I | AGGCCT | 1 cut(s) | 86 |
| Eco31I | GGTCTC | 1 cut(s) | 131 |
| EcoRI | GAATTC | 1 cut(s) | 17 |
| FaiI | YATR | 4 cut(s) | 57, 59, 191, 212 |
| FaqI | GGGAC | 1 cut(s) | 209 |
| FauNDI | CATATG | 1 cut(s) | 57 |
| Fnu4HI | GCNGC | 1 cut(s) | 44 |
| Fsp4HI | GCNGC | 1 cut(s) | 44 |
| FspBI | CTAG | 2 cut(s) | 150, 220 |
| GluI | GCNGC | 1 cut(s) | 44 |
| HaeIII | GGCC | 2 cut(s) | 86, 188 |
| HphI | GGTGA | 1 cut(s) | 113 |
| Hpy188III | TCNNGA | 1 cut(s) | 80 |
| HpyAV | CCTTC | 3 cut(s) | 19, 178, 200 |
| HpyCH4III | ACNGT | 2 cut(s) | 27, 134 |
| HpyCH4V | TGCA | 2 cut(s) | 43, 61 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 216 |
| HpyF3I | CTNAG | 1 cut(s) | 78 |
| Kzo9I | GATC | 3 cut(s) | 105, 120, 201 |
| LpnPI | CCDG | 2 cut(s) | 64, 65 |
| Lsp1109I | GCAGC | 1 cut(s) | 55 |
| MaeI | CTAG | 2 cut(s) | 150, 220 |
| MaeIII | GTNAC | 1 cut(s) | 166 |
| MalI | GATC | 3 cut(s) | 107, 122, 203 |
| MboI | GATC | 3 cut(s) | 105, 120, 201 |
| MboII | GAAGA | 1 cut(s) | 130 |
| MluCI | AATT | 1 cut(s) | 17 |
| MnlI | CCTC | 3 cut(s) | 29, 76, 138 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 216 |
| NdeI | CATATG | 1 cut(s) | 57 |
| NdeII | GATC | 3 cut(s) | 105, 120, 201 |
| NmuCI | GTSAC | 1 cut(s) | 166 |
| PceI | AGGCCT | 1 cut(s) | 86 |
| PflFI | GACNNNGTC | 1 cut(s) | 51 |
| PkrI | GCNGC | 1 cut(s) | 45 |
| Ple19I | CGATCG | 1 cut(s) | 204 |
| PsyI | GACNNNGTC | 1 cut(s) | 51 |
| PvuI | CGATCG | 1 cut(s) | 204 |
| SatI | GCNGC | 1 cut(s) | 44 |
| Sau3AI | GATC | 3 cut(s) | 105, 120, 201 |
| SetI | ASST | 2 cut(s) | 67, 149 |
| Sse9I | AATT | 1 cut(s) | 17 |
| SseBI | AGGCCT | 1 cut(s) | 86 |
| SspMI | CTAG | 2 cut(s) | 150, 220 |
| StuI | AGGCCT | 1 cut(s) | 86 |
| TaaI | ACNGT | 2 cut(s) | 27, 134 |
| TaqI | TCGA | 3 cut(s) | 12, 116, 204 |
| TaqII | GACCGA | 1 cut(s) | 155 |
| TasI | AATT | 1 cut(s) | 17 |
| TseFI | GTSAC | 1 cut(s) | 166 |
| TseI | GCWGC | 1 cut(s) | 43 |
| Tsp45I | GTSAC | 1 cut(s) | 166 |
| TspDTI | ATGAA | 1 cut(s) | 30 |
| Tth111I | GACNNNGTC | 1 cut(s) | 51 |
| XapI | RAATTY | 1 cut(s) | 17 |
| XspI | CTAG | 2 cut(s) | 150, 220 |