Prupe.1G216100_v2.0.a1
MYB Family

Myb/SANT-like DNA-binding domain

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Forward (+)
22934299 .. 22937268
2970 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G216100.1

Sequence Viewer

Length: 1029 bp
ATGCTCATGGCCTTGGAGCAGCAGGTGAGCCTGAACCCCGTTGACGGCGAAACTAACGGCGTTGACGCCCGCCACCCCACGTCAGCGGAGACCGGAGATGACGCCAGCAAGGCGCCGAGGCTGCCACGCTGGACGCGGCAGGAGATTCTCGTCCTCATAAACGGGAAGAGGTACGCCGAGAGCCGGGGCGGGGGGCGGACCCCGAGGTCGGACTTCGGGTCGGGTCAGGCGGAGCCGAAATGGGCCGCGGTCTCGACGTACTGCAAGAAGCACGGGGTGAACCGGGGACCGGTCCAGTGCCGGAAGCGGTGGAGCAATTTGGCGGGGGACTTCAAGAAGATCAGGGAGTGGGAGGTGCAGAGGAAGGACGAAACGGAGTCGTTTTGGGTGATGAGGAACGACCTGAGGAGAGAGAGGAAGTTGCCGGGGTTTTTCGATAAGGAGGTTTATGATATAATGGAGGCGGTTCCGGGTGCTCCGATTTCGCTCGCTCTACCGGGTCCGACCCGGGTGGAGTCCGAGGATGTGAAGGAGGAGGGGATGACTGAGGAGGCTGAGAACTTGTTTGATAGTATACAGAGGCCCACGGAGGACGGGTTGTTTTCCGACGATGAGTCGGGCCGGAGTCCTGAGAAGGAAGTCCGGTTCAAGGAGGGTCCGGGGAGTACCACAGTGATTTCAGGCCCTTTGCCAATATCAGAGAAGCAGTACAAACCAATACCTCAAGGATGCCAAGGACAAGGTGCAGCAGACCAAAAACAGCCAGCTTCAATACCTGAGATTGGATCTACTTCTCAAGACCGGAAGCGGAAACGTTTTACAATAGATGTAGACGAGGAAACATCCAATCTGCAGAATCAGTTGATTGATGTCATGGAAAGGAATGGCAAAGTGCTGTCTGACTATATCCATGCTCAGAATTCCCATTCGCAACTCGATCGGGAGCAGAGGAAGGAGCATTCTGATAGCTTAATTGCTGTTCTTAATAAGCTTGCAGATGCTTTTATGAGAATCGCTGAGAAATTGTAG

Protein Analysis

343

Amino Acids

38.44

Weight (kDa)

5.64

Isoelectric Point (pI)

42.68

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 13
AasI GACNNNNNNGTC 1 cut(s) 205
Acc36I ACCTGC 1 cut(s) 13
AccB1I GGYRCC 1 cut(s) 112
AccI GTMKAC 2 cut(s) 574, 831
AccII CGCG 2 cut(s) 136, 248
AclI AACGTT 1 cut(s) 814
AclWI GGATC 1 cut(s) 793
AcsI RAATTY 1 cut(s) 919
AcyI GRCGYC 3 cut(s) 66, 102, 113
AdeI CACNNNGTG 1 cut(s) 277
AfaI GTAC 4 cut(s) 173, 260, 667, 710
AfiI CCNNNNNNNGG 7 cut(s) 44, 183, 190, 208, 289, 649, 782
AgeI ACCGGT 1 cut(s) 289
AgsI TTSAA 3 cut(s) 334, 649, 771
AhdI GACNNNNNGTC 2 cut(s) 217, 613
AjiI CACGTC 1 cut(s) 81
AloI GAACNNNNNNTCC 2 cut(s) 629, 661
AluBI AGCT 3 cut(s) 767, 969, 991
AluI AGCT 3 cut(s) 767, 969, 991
Alw21I GWGCWC 1 cut(s) 478
Alw26I GTCTC 2 cut(s) 83, 256
AlwI GGATC 1 cut(s) 793
Ama87I CYCGRG 2 cut(s) 202, 507
AoxI GGCC 5 cut(s) 9, 243, 581, 619, 682
ApeKI GCWGC 3 cut(s) 19, 121, 746
ApoI RAATTY 1 cut(s) 919
AsiGI ACCGGT 1 cut(s) 289
AspLEI GCGC 1 cut(s) 115
AspS9I GGNCC 9 cut(s) 198, 243, 287, 292, 500, 582, 619, 656, 683
AsuC2I CCSGG 8 cut(s) 185, 284, 426, 471, 498, 508, 509, 660
AsuHPI GGTGA 3 cut(s) 37, 289, 400
AvaI CYCGRG 2 cut(s) 202, 507
AvaII GGWCC 5 cut(s) 198, 287, 292, 500, 656
AxyI CCTNAGG 1 cut(s) 404
BanI GGYRCC 1 cut(s) 112
Bbv12I GWGCWC 1 cut(s) 478
BbvI GCAGC 3 cut(s) 31, 108, 758
BceAI ACGGC 2 cut(s) 61, 73
BcgI CGANNNNNNTGC 2 cut(s) 920, 954
BcnI CCSGG 8 cut(s) 185, 284, 426, 471, 498, 508, 509, 660
BcoDI GTCTC 2 cut(s) 83, 256
BfmI CTRYAG 1 cut(s) 851
BfoI RGCGCY 1 cut(s) 116
BfuAI ACCTGC 1 cut(s) 13
BglI GCCNNNNNGGC 1 cut(s) 110
BisI GCNGC 5 cut(s) 20, 122, 137, 246, 747
BlsI GCNGC 5 cut(s) 21, 123, 138, 247, 748
Bme1390I CCNGG 8 cut(s) 185, 284, 426, 471, 498, 508, 509, 660
Bme18I GGWCC 5 cut(s) 198, 287, 292, 500, 656
BmeRI GACNNNNNGTC 2 cut(s) 217, 613
BmeT110I CYCGRG 2 cut(s) 202, 507
BmgBI CACGTC 1 cut(s) 81
BmgT120I GGNCC 9 cut(s) 198, 243, 287, 292, 500, 582, 619, 656, 683
BmiI GGNNCC 7 cut(s) 114, 200, 234, 288, 468, 501, 657
BmrFI CCNGG 8 cut(s) 185, 284, 426, 471, 498, 508, 509, 660
BmsI GCATC 2 cut(s) 719, 988
BpuEI CTTGAG 2 cut(s) 708, 780
BpuMI CCSGG 8 cut(s) 185, 284, 426, 471, 498, 508, 509, 660
BsaHI GRCGYC 3 cut(s) 66, 102, 113
BsaI GGTCTC 2 cut(s) 83, 256
BsaWI WCCGGW 4 cut(s) 92, 289, 642, 801
BsaXI ACNNNNNCTCC 2 cut(s) 581, 611
Bsc4I CCNNNNNNNGG 7 cut(s) 44, 183, 190, 208, 289, 649, 782
Bse118I RCCGGY 1 cut(s) 289
Bse1I ACTGG 1 cut(s) 295
Bse21I CCTNAGG 1 cut(s) 404
BseGI GGATG 4 cut(s) 529, 546, 734, 842
BseLI CCNNNNNNNGG 7 cut(s) 44, 183, 190, 208, 289, 649, 782
BseMII CTCAG 7 cut(s) 395, 537, 546, 621, 768, 929, 1008
BseNI ACTGG 1 cut(s) 295
BseRI GAGGAG 3 cut(s) 421, 548, 563
BseXI GCAGC 3 cut(s) 31, 108, 758
BsgI GTGCAG 2 cut(s) 377, 765
Bsh1236I CGCG 2 cut(s) 136, 248
Bsh1285I CGRYCG 1 cut(s) 940
BshFI GGCC 5 cut(s) 11, 245, 583, 621, 684
BshNI GGYRCC 1 cut(s) 112
BshTI ACCGGT 1 cut(s) 289
BsiEI CGRYCG 1 cut(s) 940
BsiHKAI GWGCWC 1 cut(s) 478
BsiHKCI CYCGRG 2 cut(s) 202, 507
BslFI GGGAC 2 cut(s) 300, 341
BslI CCNNNNNNNGG 7 cut(s) 44, 183, 190, 208, 289, 649, 782
BsmAI GTCTC 2 cut(s) 83, 256
BsmFI GGGAC 2 cut(s) 300, 341
BsmI GAATGC 1 cut(s) 958
BsnI GGCC 5 cut(s) 11, 245, 583, 621, 684
Bso31I GGTCTC 2 cut(s) 83, 256
BsoBI CYCGRG 2 cut(s) 202, 507
Bsp1286I GDGCHC 1 cut(s) 478
Bsp143I GATC 3 cut(s) 339, 785, 937
BspANI GGCC 5 cut(s) 11, 245, 583, 621, 684
BspCNI CTCAG 7 cut(s) 396, 538, 547, 622, 769, 928, 1009
BspFNI CGCG 2 cut(s) 136, 248
BspLI GGNNCC 7 cut(s) 114, 200, 234, 288, 468, 501, 657
BspMAI CTGCAG 1 cut(s) 855
BspMI ACCTGC 1 cut(s) 13
BspPI GGATC 1 cut(s) 793
BspT107I GGYRCC 1 cut(s) 112
BspTNI GGTCTC 2 cut(s) 83, 256
BsrFI RCCGGY 1 cut(s) 289
BsrI ACTGG 1 cut(s) 295
BssAI RCCGGY 1 cut(s) 289
BssMI GATC 3 cut(s) 339, 785, 937
BssNAI GTATAC 1 cut(s) 575
BssNI GRCGYC 3 cut(s) 66, 102, 113
BssT1I CCWWGG 2 cut(s) 12, 733
Bst1107I GTATAC 1 cut(s) 575
Bst4CI ACNGT 1 cut(s) 673
Bst6I CTCTTC 1 cut(s) 161
BstACI GRCGYC 3 cut(s) 66, 102, 113
BstC8I GCNNGC 5 cut(s) 70, 106, 489, 765, 993
BstDEI CTNAG 7 cut(s) 404, 546, 555, 630, 777, 915, 1017
BstDSI CCRYGG 2 cut(s) 246, 585
BstF5I GGATG 4 cut(s) 529, 546, 734, 842
BstFNI CGCG 2 cut(s) 136, 248
BstH2I RGCGCY 1 cut(s) 116
BstHHI GCGC 1 cut(s) 115
BstKTI GATC 3 cut(s) 342, 788, 940
BstMAI GTCTC 2 cut(s) 83, 256
BstMBI GATC 3 cut(s) 339, 785, 937
BstMCI CGRYCG 1 cut(s) 940
BstMWI GCNNNNNNNGC 2 cut(s) 110, 121
BstSCI CCNGG 8 cut(s) 183, 282, 424, 469, 496, 506, 507, 658
BstSFI CTRYAG 1 cut(s) 851
BstUI CGCG 2 cut(s) 136, 248
BstV1I GCAGC 3 cut(s) 31, 108, 758
BstX2I RGATCY 1 cut(s) 785
BstYI RGATCY 1 cut(s) 785
BstZ17I GTATAC 1 cut(s) 575
Bsu36I CCTNAGG 1 cut(s) 404
BsuRI GGCC 5 cut(s) 11, 245, 583, 621, 684
BtgI CCRYGG 2 cut(s) 246, 585
BtrI CACGTC 1 cut(s) 81
BtsCI GGATG 4 cut(s) 529, 546, 734, 842
BtsIMutI CAGTG 2 cut(s) 302, 678
BveI ACCTGC 1 cut(s) 13
Cac8I GCNNGC 5 cut(s) 70, 106, 489, 765, 993
CfoI GCGC 1 cut(s) 115
Cfr10I RCCGGY 1 cut(s) 289
Cfr13I GGNCC 9 cut(s) 198, 243, 287, 292, 500, 582, 619, 656, 683
Cfr42I CCGCGG 1 cut(s) 249
Cfr9I CCCGGG 1 cut(s) 507
CseI GACGC 3 cut(s) 74, 110, 142
Csp6I GTAC 4 cut(s) 172, 259, 666, 709
CspAI ACCGGT 1 cut(s) 289
CviAII CATG 3 cut(s) 7, 874, 911
CviQI GTAC 4 cut(s) 172, 259, 666, 709
DdeI CTNAG 7 cut(s) 404, 546, 555, 630, 777, 915, 1017
DinI GGCGCC 1 cut(s) 114
DpnI GATC 3 cut(s) 341, 787, 939
DpnII GATC 3 cut(s) 339, 785, 937
DraIII CACNNNGTG 1 cut(s) 277
DrdI GACNNNNNNGTC 1 cut(s) 205
DriI GACNNNNNGTC 2 cut(s) 217, 613
DseDI GACNNNNNNGTC 1 cut(s) 205
Eam1104I CTCTTC 1 cut(s) 161
Eam1105I GACNNNNNGTC 2 cut(s) 217, 613
EarI CTCTTC 1 cut(s) 161
EciI GGCGGA 2 cut(s) 211, 245
Eco130I CCWWGG 2 cut(s) 12, 733
Eco31I GGTCTC 2 cut(s) 83, 256
Eco47I GGWCC 5 cut(s) 198, 287, 292, 500, 656
Eco81I CCTNAGG 1 cut(s) 404
Eco88I CYCGRG 2 cut(s) 202, 507
EcoO109I RGGNCCY 1 cut(s) 683
EcoRI GAATTC 1 cut(s) 919
EcoT14I CCWWGG 2 cut(s) 12, 733
EgeI GGCGCC 1 cut(s) 114
EheI GGCGCC 1 cut(s) 114
ErhI CCWWGG 2 cut(s) 12, 733
FaeI CATG 3 cut(s) 10, 877, 914
FaiI YATR 9 cut(s) 8, 158, 450, 455, 575, 875, 906, 912, 1007
FaqI GGGAC 2 cut(s) 300, 341
FatI CATG 3 cut(s) 6, 873, 910
FauI CCCGC 3 cut(s) 77, 182, 316
FblI GTMKAC 2 cut(s) 574, 831
Fnu4HI GCNGC 5 cut(s) 20, 122, 137, 246, 747
FokI GGATG 4 cut(s) 536, 553, 741, 829
Fsp4HI GCNGC 5 cut(s) 20, 122, 137, 246, 747
GlaI GCGC 1 cut(s) 114
GluI GCNGC 5 cut(s) 20, 122, 137, 246, 747
HaeII RGCGCY 1 cut(s) 116
HaeIII GGCC 5 cut(s) 11, 245, 583, 621, 684
HgaI GACGC 3 cut(s) 74, 110, 142
HhaI GCGC 1 cut(s) 115
Hin1I GRCGYC 3 cut(s) 66, 102, 113
Hin1II CATG 3 cut(s) 10, 877, 914
Hin6I GCGC 1 cut(s) 113
HinP1I GCGC 1 cut(s) 113
HincII GTYRAC 2 cut(s) 43, 64
HindII GTYRAC 2 cut(s) 43, 64
HindIII AAGCTT 1 cut(s) 989
HinfI GANTC 7 cut(s) 145, 377, 515, 614, 625, 856, 1011
HphI GGTGA 3 cut(s) 37, 289, 400
Hpy166II GTNNAC 5 cut(s) 43, 64, 280, 575, 832
Hpy188I TCNGA 9 cut(s) 211, 480, 504, 520, 607, 700, 901, 918, 964
Hpy188III TCNNGA 5 cut(s) 253, 334, 629, 797, 941
Hpy8I GTNNAC 5 cut(s) 43, 64, 280, 575, 832
Hpy99I CGWCG 2 cut(s) 259, 611
HpyAV CCTTC 4 cut(s) 358, 523, 628, 946
HpyCH4III ACNGT 1 cut(s) 673
HpyCH4IV ACGT 3 cut(s) 80, 257, 814
HpyCH4V TGCA 5 cut(s) 264, 358, 746, 853, 995
HpyF10VI GCNNNNNNNGC 2 cut(s) 110, 121
HpyF3I CTNAG 7 cut(s) 404, 546, 555, 630, 777, 915, 1017
HpySE526I ACGT 3 cut(s) 80, 257, 814
Hsp92I GRCGYC 3 cut(s) 66, 102, 113
Hsp92II CATG 3 cut(s) 10, 877, 914
HspAI GCGC 1 cut(s) 113
KasI GGCGCC 1 cut(s) 112
KspI CCGCGG 1 cut(s) 249
Kzo9I GATC 3 cut(s) 339, 785, 937
LmnI GCTCC 6 cut(s) 16, 232, 312, 481, 943, 955
Lsp1109I GCAGC 3 cut(s) 31, 108, 758
LweI GCATC 2 cut(s) 719, 988
MaeII ACGT 3 cut(s) 80, 257, 814
MalI GATC 3 cut(s) 341, 787, 939
MboI GATC 3 cut(s) 339, 785, 937
MboII GAAGA 2 cut(s) 178, 349
MflI RGATCY 1 cut(s) 785
MhlI GDGCHC 1 cut(s) 478
MluCI AATT 4 cut(s) 316, 919, 972, 1022
Mly113I GGCGCC 1 cut(s) 113
MlyI GAGTC 4 cut(s) 386, 524, 623, 634
MmeI TCCRAC 3 cut(s) 189, 527, 630
MseI TTAA 2 cut(s) 971, 984
MspA1I CMGCKG 2 cut(s) 86, 248
MspR9I CCNGG 8 cut(s) 185, 284, 426, 471, 498, 508, 509, 660
Mva1269I GAATGC 1 cut(s) 958
MvnI CGCG 2 cut(s) 136, 248
MwoI GCNNNNNNNGC 2 cut(s) 110, 121
NarI GGCGCC 1 cut(s) 113
NciI CCSGG 8 cut(s) 185, 284, 426, 471, 498, 508, 509, 660
NdeII GATC 3 cut(s) 339, 785, 937
NlaIII CATG 3 cut(s) 10, 877, 914
NlaIV GGNNCC 7 cut(s) 114, 200, 234, 288, 468, 501, 657
NmeAIII GCCGAG 2 cut(s) 141, 202
PaqCI CACCTGC 1 cut(s) 13
PctI GAATGC 1 cut(s) 958
PfeI GAWTC 3 cut(s) 145, 856, 1011
PinAI ACCGGT 1 cut(s) 289
PkrI GCNGC 5 cut(s) 21, 123, 138, 247, 748
Ple19I CGATCG 1 cut(s) 940
PleI GAGTC 4 cut(s) 385, 523, 622, 633
PluTI GGCGCC 1 cut(s) 116
PpsI GAGTC 4 cut(s) 385, 523, 622, 633
Psp1406I AACGTT 1 cut(s) 814
PspN4I GGNNCC 7 cut(s) 114, 200, 234, 288, 468, 501, 657
PspPI GGNCC 9 cut(s) 198, 243, 287, 292, 500, 582, 619, 656, 683
PstI CTGCAG 1 cut(s) 855
PsuI RGATCY 1 cut(s) 785
PvuI CGATCG 1 cut(s) 940
RsaI GTAC 4 cut(s) 173, 260, 667, 710
RsaNI GTAC 4 cut(s) 172, 259, 666, 709
SacII CCGCGG 1 cut(s) 249
SaqAI TTAA 2 cut(s) 971, 984
SatI GCNGC 5 cut(s) 20, 122, 137, 246, 747
Sau3AI GATC 3 cut(s) 339, 785, 937
Sau96I GGNCC 9 cut(s) 198, 243, 287, 292, 500, 582, 619, 656, 683
SchI GAGTC 4 cut(s) 386, 524, 623, 634
ScrFI CCNGG 8 cut(s) 185, 284, 426, 471, 498, 508, 509, 660
SduI GDGCHC 1 cut(s) 478
SfaNI GCATC 2 cut(s) 719, 988
SfcI CTRYAG 1 cut(s) 851
SfoI GGCGCC 1 cut(s) 114
Sfr303I CCGCGG 1 cut(s) 249
SgrBI CCGCGG 1 cut(s) 249
SinI GGWCC 5 cut(s) 198, 287, 292, 500, 656
SmaI CCCGGG 1 cut(s) 509
SmlI CTYRAG 2 cut(s) 723, 795
SmoI CTYRAG 2 cut(s) 723, 795
Sse9I AATT 4 cut(s) 316, 919, 972, 1022
SspDI GGCGCC 1 cut(s) 112
StyD4I CCNGG 8 cut(s) 183, 282, 424, 469, 496, 506, 507, 658
StyI CCWWGG 2 cut(s) 12, 733
TaaI ACNGT 1 cut(s) 673
TaiI ACGT 3 cut(s) 83, 260, 817
TaqI TCGA 3 cut(s) 254, 435, 936
TasI AATT 4 cut(s) 316, 919, 972, 1022
TatI WGTACW 1 cut(s) 708
TauI GCSGC 2 cut(s) 139, 248
TfiI GAWTC 3 cut(s) 145, 856, 1011
Tru1I TTAA 2 cut(s) 971, 984
Tru9I TTAA 2 cut(s) 971, 984
TscAI CASTG 2 cut(s) 302, 678
TseI GCWGC 3 cut(s) 19, 121, 746
TspGWI ACGGA 2 cut(s) 389, 602
TspMI CCCGGG 1 cut(s) 507
TspRI CASTG 2 cut(s) 302, 678
VpaK11BI GGWCC 5 cut(s) 198, 287, 292, 500, 656
XapI RAATTY 1 cut(s) 919
XmaI CCCGGG 1 cut(s) 507
XmiI GTMKAC 2 cut(s) 574, 831
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.