Belongs to the RNase T2 family
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G02990 |
| fragaria_vesca | FvH4_4g31291 FvH4_5g24800 |
| malus_domestica | MD13G1071600.v1.1 MD16G1072300.v1.1 MD16G1072400.v1.1 |
| prunus_persica | Prupe.1G275300_v2.0.a1 |
| pyrus_communis | pycom13g06420 pycom16g06270 |
| rosa_chinensis | RchiOBHm_Chr4g0439741 RchiOBHm_Chr7g0215091 RchiOBHm_Chr7g0215101 |
| rosa_laevigata | RLG00000002691 RLG00000006240 |
| rosa_multiflora | Rmu_sc0001239.1_g000001 Rmu_sc0010226.1_g000008 Rmu_ssc0000029.1_g000010 |
| rosa_roxburghii | Rroxscaffold_5G00380680 |
| rosa_rugosa | Rorug04G0321200 Rorug07G0150100 |
| rosa_samantha | Rh4AG372200 Rh4BG384300 Rh4CG399000 Rh4DG378700 Rh7AG287100 Rh7BG278700 Rh7CG306800 |
| rosa_wichuraiana | Rw4G031780 Rw7G024480 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 371 |
| Acc36I | ACCTGC | 1 cut(s) | 371 |
| AccB1I | GGYRCC | 1 cut(s) | 359 |
| AciI | CCGC | 1 cut(s) | 315 |
| AcoI | YGGCCR | 3 cut(s) | 104, 191, 293 |
| AfaI | GTAC | 1 cut(s) | 39 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 152 |
| AgsI | TTSAA | 2 cut(s) | 449, 623 |
| AjnI | CCWGG | 2 cut(s) | 106, 579 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 460, 492 |
| AluBI | AGCT | 4 cut(s) | 167, 305, 407, 443 |
| AluI | AGCT | 4 cut(s) | 167, 305, 407, 443 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 374 |
| AoxI | GGCC | 3 cut(s) | 104, 191, 293 |
| ApeKI | GCWGC | 5 cut(s) | 138, 164, 276, 401, 404 |
| BalI | TGGCCA | 3 cut(s) | 106, 193, 295 |
| BanI | GGYRCC | 1 cut(s) | 359 |
| BbvI | GCAGC | 5 cut(s) | 125, 176, 288, 413, 416 |
| BciT130I | CCWGG | 2 cut(s) | 108, 581 |
| BclI | TGATCA | 2 cut(s) | 24, 247 |
| BfaI | CTAG | 3 cut(s) | 41, 234, 302 |
| BfmI | CTRYAG | 1 cut(s) | 162 |
| BfuAI | ACCTGC | 1 cut(s) | 371 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 315 |
| BglII | AGATCT | 1 cut(s) | 265 |
| BisI | GCNGC | 6 cut(s) | 139, 165, 277, 316, 402, 405 |
| BlsI | GCNGC | 6 cut(s) | 140, 166, 278, 317, 403, 406 |
| BmcAI | AGTACT | 1 cut(s) | 39 |
| Bme1390I | CCNGG | 2 cut(s) | 108, 581 |
| BmiI | GGNNCC | 2 cut(s) | 361, 610 |
| BmrFI | CCNGG | 2 cut(s) | 108, 581 |
| BmrI | ACTGGG | 1 cut(s) | 623 |
| BmsI | GCATC | 1 cut(s) | 493 |
| BmuI | ACTGGG | 1 cut(s) | 623 |
| BsaJI | CCNNGG | 3 cut(s) | 107, 487, 640 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 152 |
| Bse1I | ACTGG | 2 cut(s) | 526, 629 |
| Bse3DI | GCAATG | 1 cut(s) | 553 |
| BseBI | CCWGG | 2 cut(s) | 108, 581 |
| BseDI | CCNNGG | 3 cut(s) | 107, 487, 640 |
| BseGI | GGATG | 3 cut(s) | 50, 508, 559 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 152 |
| BseMI | GCAATG | 1 cut(s) | 553 |
| BseMII | CTCAG | 2 cut(s) | 246, 381 |
| BseNI | ACTGG | 2 cut(s) | 526, 629 |
| BseRI | GAGGAG | 1 cut(s) | 425 |
| BseXI | GCAGC | 5 cut(s) | 125, 176, 288, 413, 416 |
| BseYI | CCCAGC | 1 cut(s) | 311 |
| BsgI | GTGCAG | 1 cut(s) | 474 |
| BshFI | GGCC | 3 cut(s) | 106, 193, 295 |
| BshNI | GGYRCC | 1 cut(s) | 359 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 152 |
| BsmI | GAATGC | 2 cut(s) | 177, 629 |
| BsnI | GGCC | 3 cut(s) | 106, 193, 295 |
| Bsp143I | GATC | 3 cut(s) | 24, 247, 265 |
| Bsp19I | CCATGG | 1 cut(s) | 640 |
| BspACI | CCGC | 1 cut(s) | 315 |
| BspANI | GGCC | 3 cut(s) | 106, 193, 295 |
| BspCNI | CTCAG | 2 cut(s) | 247, 380 |
| BspLI | GGNNCC | 2 cut(s) | 361, 610 |
| BspMAI | CTGCAG | 1 cut(s) | 166 |
| BspMI | ACCTGC | 1 cut(s) | 371 |
| BspT107I | GGYRCC | 1 cut(s) | 359 |
| BsrDI | GCAATG | 1 cut(s) | 553 |
| BsrI | ACTGG | 2 cut(s) | 526, 629 |
| BssECI | CCNNGG | 3 cut(s) | 107, 487, 640 |
| BssMI | GATC | 3 cut(s) | 24, 247, 265 |
| BssT1I | CCWWGG | 2 cut(s) | 487, 640 |
| Bst2UI | CCWGG | 2 cut(s) | 108, 581 |
| Bst4CI | ACNGT | 2 cut(s) | 119, 209 |
| BstC8I | GCNNGC | 4 cut(s) | 162, 281, 307, 457 |
| BstDEI | CTNAG | 3 cut(s) | 255, 269, 367 |
| BstDSI | CCRYGG | 1 cut(s) | 640 |
| BstF5I | GGATG | 3 cut(s) | 50, 508, 559 |
| BstKTI | GATC | 3 cut(s) | 27, 250, 268 |
| BstMBI | GATC | 3 cut(s) | 24, 247, 265 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 234, 315, 321 |
| BstNI | CCWGG | 2 cut(s) | 108, 581 |
| BstNSI | RCATGY | 1 cut(s) | 283 |
| BstSCI | CCNGG | 2 cut(s) | 106, 579 |
| BstSFI | CTRYAG | 1 cut(s) | 162 |
| BstV1I | GCAGC | 5 cut(s) | 125, 176, 288, 413, 416 |
| BstX2I | RGATCY | 1 cut(s) | 265 |
| BstYI | RGATCY | 1 cut(s) | 265 |
| BsuRI | GGCC | 3 cut(s) | 106, 193, 295 |
| BtgI | CCRYGG | 1 cut(s) | 640 |
| BtsCI | GGATG | 3 cut(s) | 50, 508, 559 |
| BtsI | GCAGTG | 2 cut(s) | 107, 325 |
| BtsIMutI | CAGTG | 2 cut(s) | 107, 325 |
| BveI | ACCTGC | 1 cut(s) | 371 |
| Cac8I | GCNNGC | 4 cut(s) | 162, 281, 307, 457 |
| CaiI | CAGNNNCTG | 1 cut(s) | 374 |
| CsiI | ACCWGGT | 1 cut(s) | 579 |
| Csp6I | GTAC | 1 cut(s) | 38 |
| CviAII | CATG | 6 cut(s) | 182, 280, 341, 356, 389, 641 |
| CviQI | GTAC | 1 cut(s) | 38 |
| DdeI | CTNAG | 3 cut(s) | 255, 269, 367 |
| DpnI | GATC | 3 cut(s) | 26, 249, 267 |
| DpnII | GATC | 3 cut(s) | 24, 247, 265 |
| EaeI | YGGCCR | 3 cut(s) | 104, 191, 293 |
| Eco130I | CCWWGG | 2 cut(s) | 487, 640 |
| EcoRII | CCWGG | 2 cut(s) | 106, 579 |
| EcoT14I | CCWWGG | 2 cut(s) | 487, 640 |
| ErhI | CCWWGG | 2 cut(s) | 487, 640 |
| FaeI | CATG | 6 cut(s) | 185, 283, 344, 359, 392, 644 |
| FatI | CATG | 6 cut(s) | 181, 279, 340, 355, 388, 640 |
| FbaI | TGATCA | 2 cut(s) | 24, 247 |
| Fnu4HI | GCNGC | 6 cut(s) | 139, 165, 277, 316, 402, 405 |
| FokI | GGATG | 3 cut(s) | 57, 515, 566 |
| Fsp4HI | GCNGC | 6 cut(s) | 139, 165, 277, 316, 402, 405 |
| FspBI | CTAG | 3 cut(s) | 41, 234, 302 |
| GluI | GCNGC | 6 cut(s) | 139, 165, 277, 316, 402, 405 |
| GsaI | CCCAGC | 1 cut(s) | 315 |
| HaeIII | GGCC | 3 cut(s) | 106, 193, 295 |
| Hin1II | CATG | 6 cut(s) | 185, 283, 344, 359, 392, 644 |
| HinfI | GANTC | 3 cut(s) | 371, 476, 557 |
| Hpy166II | GTNNAC | 3 cut(s) | 586, 598, 656 |
| Hpy188I | TCNGA | 4 cut(s) | 256, 265, 370, 613 |
| Hpy188III | TCNNGA | 2 cut(s) | 334, 446 |
| Hpy8I | GTNNAC | 3 cut(s) | 586, 598, 656 |
| HpyAV | CCTTC | 1 cut(s) | 681 |
| HpyCH4III | ACNGT | 2 cut(s) | 119, 209 |
| HpyCH4V | TGCA | 8 cut(s) | 68, 164, 283, 401, 455, 506, 518, 546 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 234, 315, 321 |
| HpyF3I | CTNAG | 3 cut(s) | 255, 269, 367 |
| Hsp92II | CATG | 6 cut(s) | 185, 283, 344, 359, 392, 644 |
| Ksp22I | TGATCA | 2 cut(s) | 24, 247 |
| Kzo9I | GATC | 3 cut(s) | 24, 247, 265 |
| LmnI | GCTCC | 1 cut(s) | 614 |
| Lsp1109I | GCAGC | 5 cut(s) | 125, 176, 288, 413, 416 |
| LweI | GCATC | 1 cut(s) | 493 |
| MabI | ACCWGGT | 1 cut(s) | 579 |
| MaeI | CTAG | 3 cut(s) | 41, 234, 302 |
| MaeIII | GTNAC | 2 cut(s) | 119, 392 |
| MalI | GATC | 3 cut(s) | 26, 249, 267 |
| MboI | GATC | 3 cut(s) | 24, 247, 265 |
| MboII | GAAGA | 2 cut(s) | 76, 83 |
| MflI | RGATCY | 1 cut(s) | 265 |
| MlsI | TGGCCA | 3 cut(s) | 106, 193, 295 |
| MluCI | AATT | 3 cut(s) | 10, 196, 425 |
| MluNI | TGGCCA | 3 cut(s) | 106, 193, 295 |
| MlyI | GAGTC | 1 cut(s) | 380 |
| MmeI | TCCRAC | 2 cut(s) | 170, 636 |
| MnlI | CCTC | 6 cut(s) | 25, 229, 425, 443, 446, 626 |
| Mox20I | TGGCCA | 3 cut(s) | 106, 193, 295 |
| MscI | TGGCCA | 3 cut(s) | 106, 193, 295 |
| MseI | TTAA | 3 cut(s) | 411, 428, 510 |
| MslI | CAYNNNNRTG | 1 cut(s) | 343 |
| Msp20I | TGGCCA | 3 cut(s) | 106, 193, 295 |
| MspA1I | CMGCKG | 2 cut(s) | 167, 315 |
| MspR9I | CCNGG | 2 cut(s) | 108, 581 |
| Mva1269I | GAATGC | 2 cut(s) | 177, 629 |
| MvaI | CCWGG | 2 cut(s) | 108, 581 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 234, 315, 321 |
| NcoI | CCATGG | 1 cut(s) | 640 |
| NdeII | GATC | 3 cut(s) | 24, 247, 265 |
| NlaIII | CATG | 6 cut(s) | 185, 283, 344, 359, 392, 644 |
| NlaIV | GGNNCC | 2 cut(s) | 361, 610 |
| NmuCI | GTSAC | 1 cut(s) | 119 |
| NspI | RCATGY | 1 cut(s) | 283 |
| PaeI | GCATGC | 1 cut(s) | 283 |
| PaqCI | CACCTGC | 1 cut(s) | 371 |
| PctI | GAATGC | 2 cut(s) | 177, 629 |
| PfeI | GAWTC | 2 cut(s) | 476, 557 |
| PkrI | GCNGC | 6 cut(s) | 140, 166, 278, 317, 403, 406 |
| PleI | GAGTC | 1 cut(s) | 379 |
| PpsI | GAGTC | 1 cut(s) | 379 |
| Psp6I | CCWGG | 2 cut(s) | 106, 579 |
| PspFI | CCCAGC | 1 cut(s) | 311 |
| PspGI | CCWGG | 2 cut(s) | 106, 579 |
| PspN4I | GGNNCC | 2 cut(s) | 361, 610 |
| PstI | CTGCAG | 1 cut(s) | 166 |
| PstNI | CAGNNNCTG | 1 cut(s) | 374 |
| PsuI | RGATCY | 1 cut(s) | 265 |
| PvuII | CAGCTG | 1 cut(s) | 167 |
| RsaI | GTAC | 1 cut(s) | 39 |
| RsaNI | GTAC | 1 cut(s) | 38 |
| RseI | CAYNNNNRTG | 1 cut(s) | 343 |
| SaqAI | TTAA | 3 cut(s) | 411, 428, 510 |
| SatI | GCNGC | 6 cut(s) | 139, 165, 277, 316, 402, 405 |
| Sau3AI | GATC | 3 cut(s) | 24, 247, 265 |
| ScaI | AGTACT | 1 cut(s) | 39 |
| SchI | GAGTC | 1 cut(s) | 380 |
| ScrFI | CCNGG | 2 cut(s) | 108, 581 |
| SetI | ASST | 8 cut(s) | 169, 307, 365, 409, 417, 445, 585, 618 |
| SexAI | ACCWGGT | 1 cut(s) | 579 |
| SfaNI | GCATC | 1 cut(s) | 493 |
| SfcI | CTRYAG | 1 cut(s) | 162 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 343 |
| SphI | GCATGC | 1 cut(s) | 283 |
| Sse9I | AATT | 3 cut(s) | 10, 196, 425 |
| SsiI | CCGC | 1 cut(s) | 315 |
| SspMI | CTAG | 3 cut(s) | 41, 234, 302 |
| StyD4I | CCNGG | 2 cut(s) | 106, 579 |
| StyI | CCWWGG | 2 cut(s) | 487, 640 |
| TaaI | ACNGT | 2 cut(s) | 119, 209 |
| TasI | AATT | 3 cut(s) | 10, 196, 425 |
| TatI | WGTACW | 1 cut(s) | 37 |
| TauI | GCSGC | 1 cut(s) | 318 |
| TfiI | GAWTC | 2 cut(s) | 476, 557 |
| Tru1I | TTAA | 3 cut(s) | 411, 428, 510 |
| Tru9I | TTAA | 3 cut(s) | 411, 428, 510 |
| TscAI | CASTG | 2 cut(s) | 107, 325 |
| TseFI | GTSAC | 1 cut(s) | 119 |
| TseI | GCWGC | 5 cut(s) | 138, 164, 276, 401, 404 |
| Tsp45I | GTSAC | 1 cut(s) | 119 |
| TspDTI | ATGAA | 6 cut(s) | 17, 170, 201, 357, 526, 570 |
| TspRI | CASTG | 2 cut(s) | 107, 325 |
| XceI | RCATGY | 1 cut(s) | 283 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 647 |
| XspI | CTAG | 3 cut(s) | 41, 234, 302 |
| ZrmI | AGTACT | 1 cut(s) | 39 |