Aspartate-semialdehyde
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G14810 AT1G14810 |
| fragaria_vesca | FvH4_4g33450 |
| malus_domestica | MD13G1019500.v1.1 MD13G1041100.v1.1 MD16G1017700.v1.1 |
| prunus_persica | Prupe.1G334400_v2.0.a1 |
| pyrus_communis | pycom13g01660 pycom13g03540 pycom16g01600 |
| rosa_chinensis | RchiOBHm_Chr2g0166251 RchiOBHm_Chr4g0442761 |
| rosa_laevigata | RLG00000005986 RLG00000021601 |
| rosa_multiflora | Rmu_sc0000595.1_g000031 Rmu_sc0007974.1_g000012 Rmu_sc0025004.1_g000001 Rmu_ssc0000204.1_g000022 |
| rosa_roxburghii | Rroxscaffold_2G00085050 |
| rosa_rugosa | Rorug02G0521600 Rorug04G0342800 |
| rosa_samantha | Rh2AG587600 Rh2AG587700 Rh2BG599500 Rh2BG599600 Rh2CG570000 Rh2CG570500 Rh2DG609600 Rh4BG408100 Rh4CG423900 Rh5CG565000 |
| rosa_wichuraiana | Rw0G003920 Rw2G048980 Rw4G034170 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 2 cut(s) | 815, 1073 |
| AatII | GACGTC | 1 cut(s) | 318 |
| AccB1I | GGYRCC | 2 cut(s) | 29, 386 |
| AccI | GTMKAC | 2 cut(s) | 318, 838 |
| AccII | CGCG | 4 cut(s) | 245, 300, 503, 1035 |
| AccIII | TCCGGA | 1 cut(s) | 460 |
| AciI | CCGC | 9 cut(s) | 140, 243, 245, 298, 411, 437, 703, 856, 912 |
| AclWI | GGATC | 4 cut(s) | 61, 69, 74, 82 |
| AcoI | YGGCCR | 2 cut(s) | 3, 55 |
| AcsI | RAATTY | 1 cut(s) | 253 |
| AcuI | CTGAAG | 3 cut(s) | 316, 471, 947 |
| AcyI | GRCGYC | 2 cut(s) | 150, 315 |
| AfaI | GTAC | 1 cut(s) | 598 |
| AfeI | AGCGCT | 1 cut(s) | 239 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 53, 84, 136, 574, 904, 1050 |
| AflIII | ACRYGT | 1 cut(s) | 833 |
| AgsI | TTSAA | 3 cut(s) | 216, 259, 884 |
| AjnI | CCWGG | 4 cut(s) | 83, 264, 666, 937 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1046, 1078 |
| AleI | CACNNNNGTG | 1 cut(s) | 27 |
| AluBI | AGCT | 7 cut(s) | 292, 306, 408, 467, 620, 935, 1103 |
| AluI | AGCT | 7 cut(s) | 292, 306, 408, 467, 620, 935, 1103 |
| Alw21I | GWGCWC | 1 cut(s) | 294 |
| Alw26I | GTCTC | 3 cut(s) | 116, 117, 782 |
| AlwI | GGATC | 4 cut(s) | 61, 69, 74, 82 |
| Aor13HI | TCCGGA | 1 cut(s) | 460 |
| Aor51HI | AGCGCT | 1 cut(s) | 239 |
| AoxI | GGCC | 5 cut(s) | 3, 55, 86, 91, 127 |
| ApeKI | GCWGC | 6 cut(s) | 548, 608, 626, 629, 649, 1103 |
| ApoI | RAATTY | 1 cut(s) | 253 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 115, 147 |
| AspLEI | GCGC | 5 cut(s) | 161, 240, 338, 503, 505 |
| AspS9I | GGNCC | 7 cut(s) | 87, 92, 128, 184, 365, 445, 664 |
| AsuC2I | CCSGG | 3 cut(s) | 59, 72, 90 |
| AsuHPI | GGTGA | 5 cut(s) | 8, 145, 286, 958, 1094 |
| AvaII | GGWCC | 4 cut(s) | 184, 365, 445, 664 |
| BaeGI | GKGCMC | 2 cut(s) | 34, 862 |
| BalI | TGGCCA | 1 cut(s) | 5 |
| BamHI | GGATCC | 2 cut(s) | 66, 74 |
| BanI | GGYRCC | 2 cut(s) | 29, 386 |
| BanII | GRGCYC | 2 cut(s) | 64, 294 |
| Bbv12I | GWGCWC | 1 cut(s) | 294 |
| BbvI | GCAGC | 6 cut(s) | 535, 595, 613, 616, 661, 1090 |
| BccI | CCATC | 1 cut(s) | 570 |
| BceAI | ACGGC | 1 cut(s) | 359 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 376, 410 |
| BciT130I | CCWGG | 4 cut(s) | 85, 266, 668, 939 |
| BciVI | GTATCC | 1 cut(s) | 1051 |
| BclI | TGATCA | 1 cut(s) | 1084 |
| BcnI | CCSGG | 3 cut(s) | 59, 72, 90 |
| BcoDI | GTCTC | 3 cut(s) | 116, 117, 782 |
| BfaI | CTAG | 1 cut(s) | 612 |
| BfmI | CTRYAG | 1 cut(s) | 1139 |
| BfoI | RGCGCY | 2 cut(s) | 241, 339 |
| BfuI | GTATCC | 1 cut(s) | 1051 |
| BisI | GCNGC | 8 cut(s) | 437, 549, 609, 627, 630, 650, 704, 1104 |
| BlsI | GCNGC | 8 cut(s) | 438, 550, 610, 628, 631, 651, 705, 1105 |
| Bme1390I | CCNGG | 7 cut(s) | 59, 72, 85, 90, 266, 668, 939 |
| Bme18I | GGWCC | 4 cut(s) | 184, 365, 445, 664 |
| BmgT120I | GGNCC | 7 cut(s) | 87, 92, 128, 184, 365, 445, 664 |
| BmiI | GGNNCC | 6 cut(s) | 31, 68, 76, 367, 388, 447 |
| BmrFI | CCNGG | 7 cut(s) | 59, 72, 85, 90, 266, 668, 939 |
| BmsI | GCATC | 1 cut(s) | 213 |
| BpuEI | CTTGAG | 2 cut(s) | 23, 665 |
| BpuMI | CCSGG | 3 cut(s) | 59, 72, 90 |
| BsaAI | YACGTR | 2 cut(s) | 584, 600 |
| BsaHI | GRCGYC | 2 cut(s) | 150, 315 |
| BsaI | GGTCTC | 1 cut(s) | 116 |
| BsaJI | CCNNGG | 5 cut(s) | 25, 70, 243, 265, 938 |
| BsaWI | WCCGGW | 2 cut(s) | 460, 960 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 164, 194 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 53, 84, 136, 574, 904, 1050 |
| Bse118I | RCCGGY | 3 cut(s) | 125, 155, 338 |
| Bse3DI | GCAATG | 1 cut(s) | 507 |
| BseAI | TCCGGA | 1 cut(s) | 460 |
| BseBI | CCWGG | 4 cut(s) | 85, 266, 668, 939 |
| BseDI | CCNNGG | 5 cut(s) | 25, 70, 243, 265, 938 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 53, 84, 136, 574, 904, 1050 |
| BseMI | GCAATG | 1 cut(s) | 507 |
| BseMII | CTCAG | 2 cut(s) | 858, 1119 |
| BsePI | GCGCGC | 1 cut(s) | 501 |
| BseRI | GAGGAG | 1 cut(s) | 302 |
| BseSI | GKGCMC | 2 cut(s) | 34, 862 |
| BseX3I | CGGCCG | 1 cut(s) | 55 |
| BseXI | GCAGC | 6 cut(s) | 535, 595, 613, 616, 661, 1090 |
| BsgI | GTGCAG | 1 cut(s) | 1089 |
| Bsh1236I | CGCG | 4 cut(s) | 245, 300, 503, 1035 |
| Bsh1285I | CGRYCG | 1 cut(s) | 58 |
| BshFI | GGCC | 5 cut(s) | 5, 57, 88, 93, 129 |
| BshNI | GGYRCC | 2 cut(s) | 29, 386 |
| BsiEI | CGRYCG | 1 cut(s) | 58 |
| BsiHKAI | GWGCWC | 1 cut(s) | 294 |
| BsiSI | CCGG | 9 cut(s) | 54, 58, 72, 90, 126, 156, 339, 461, 961 |
| BslFI | GGGAC | 2 cut(s) | 351, 431 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 53, 84, 136, 574, 904, 1050 |
| BsmAI | GTCTC | 3 cut(s) | 116, 117, 782 |
| BsmFI | GGGAC | 2 cut(s) | 351, 431 |
| BsnI | GGCC | 5 cut(s) | 5, 57, 88, 93, 129 |
| Bso31I | GGTCTC | 1 cut(s) | 116 |
| Bsp1286I | GDGCHC | 4 cut(s) | 34, 64, 294, 862 |
| Bsp13I | TCCGGA | 1 cut(s) | 460 |
| Bsp143I | GATC | 3 cut(s) | 66, 74, 1084 |
| Bsp68I | TCGCGA | 1 cut(s) | 1035 |
| BspACI | CCGC | 9 cut(s) | 140, 243, 245, 298, 411, 437, 703, 856, 912 |
| BspANI | GGCC | 5 cut(s) | 5, 57, 88, 93, 129 |
| BspCNI | CTCAG | 2 cut(s) | 859, 1120 |
| BspEI | TCCGGA | 1 cut(s) | 460 |
| BspFNI | CGCG | 4 cut(s) | 245, 300, 503, 1035 |
| BspHI | TCATGA | 1 cut(s) | 658 |
| BspLI | GGNNCC | 6 cut(s) | 31, 68, 76, 367, 388, 447 |
| BspPI | GGATC | 4 cut(s) | 61, 69, 74, 82 |
| BspT107I | GGYRCC | 2 cut(s) | 29, 386 |
| BspTNI | GGTCTC | 1 cut(s) | 116 |
| BsrDI | GCAATG | 1 cut(s) | 507 |
| BsrFI | RCCGGY | 3 cut(s) | 125, 155, 338 |
| BssAI | RCCGGY | 3 cut(s) | 125, 155, 338 |
| BssECI | CCNNGG | 5 cut(s) | 25, 70, 243, 265, 938 |
| BssHII | GCGCGC | 1 cut(s) | 501 |
| BssMI | GATC | 3 cut(s) | 66, 74, 1084 |
| BssNAI | GTATAC | 1 cut(s) | 839 |
| BssNI | GRCGYC | 2 cut(s) | 150, 315 |
| Bst1107I | GTATAC | 1 cut(s) | 839 |
| Bst2UI | CCWGG | 4 cut(s) | 85, 266, 668, 939 |
| Bst4CI | ACNGT | 2 cut(s) | 29, 197 |
| Bst6I | CTCTTC | 2 cut(s) | 335, 759 |
| BstACI | GRCGYC | 2 cut(s) | 150, 315 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1112 |
| BstBAI | YACGTR | 2 cut(s) | 584, 600 |
| BstC8I | GCNNGC | 4 cut(s) | 228, 434, 503, 858 |
| BstDEI | CTNAG | 3 cut(s) | 573, 867, 1128 |
| BstDSI | CCRYGG | 2 cut(s) | 25, 243 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 902 |
| BstFNI | CGCG | 4 cut(s) | 245, 300, 503, 1035 |
| BstH2I | RGCGCY | 2 cut(s) | 241, 339 |
| BstHHI | GCGC | 5 cut(s) | 161, 240, 338, 503, 505 |
| BstKTI | GATC | 3 cut(s) | 69, 77, 1087 |
| BstMAI | GTCTC | 3 cut(s) | 116, 117, 782 |
| BstMBI | GATC | 3 cut(s) | 66, 74, 1084 |
| BstMCI | CGRYCG | 1 cut(s) | 58 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 156, 509, 617, 626, 1112 |
| BstNI | CCWGG | 4 cut(s) | 85, 266, 668, 939 |
| BstNSI | RCATGY | 2 cut(s) | 837, 866 |
| BstSCI | CCNGG | 7 cut(s) | 57, 70, 83, 88, 264, 666, 937 |
| BstSFI | CTRYAG | 1 cut(s) | 1139 |
| BstSLI | GKGCMC | 2 cut(s) | 34, 862 |
| BstSNI | TACGTA | 2 cut(s) | 584, 600 |
| BstUI | CGCG | 4 cut(s) | 245, 300, 503, 1035 |
| BstV1I | GCAGC | 6 cut(s) | 535, 595, 613, 616, 661, 1090 |
| BstX2I | RGATCY | 2 cut(s) | 66, 74 |
| BstYI | RGATCY | 2 cut(s) | 66, 74 |
| BstZ17I | GTATAC | 1 cut(s) | 839 |
| BstZI | CGGCCG | 1 cut(s) | 55 |
| BsuI | GTATCC | 1 cut(s) | 1051 |
| BsuRI | GGCC | 5 cut(s) | 5, 57, 88, 93, 129 |
| BtgI | CCRYGG | 2 cut(s) | 25, 243 |
| BtgZI | GCGATG | 3 cut(s) | 307, 548, 1050 |
| BtsI | GCAGTG | 1 cut(s) | 168 |
| BtsIMutI | CAGTG | 1 cut(s) | 168 |
| BtuMI | TCGCGA | 1 cut(s) | 1035 |
| Cac8I | GCNNGC | 4 cut(s) | 228, 434, 503, 858 |
| CciI | TCATGA | 1 cut(s) | 658 |
| CfoI | GCGC | 5 cut(s) | 161, 240, 338, 503, 505 |
| Cfr10I | RCCGGY | 3 cut(s) | 125, 155, 338 |
| Cfr13I | GGNCC | 7 cut(s) | 87, 92, 128, 184, 365, 445, 664 |
| Cfr42I | CCGCGG | 1 cut(s) | 246 |
| CseI | GACGC | 1 cut(s) | 139 |
| Csp6I | GTAC | 1 cut(s) | 597 |
| CviAII | CATG | 5 cut(s) | 634, 659, 834, 853, 863 |
| CviQI | GTAC | 1 cut(s) | 597 |
| DdeI | CTNAG | 3 cut(s) | 573, 867, 1128 |
| DpnI | GATC | 3 cut(s) | 68, 76, 1086 |
| DpnII | GATC | 3 cut(s) | 66, 74, 1084 |
| DrdI | GACNNNNNNGTC | 2 cut(s) | 815, 1073 |
| DseDI | GACNNNNNNGTC | 2 cut(s) | 815, 1073 |
| EaeI | YGGCCR | 2 cut(s) | 3, 55 |
| EagI | CGGCCG | 1 cut(s) | 55 |
| Eam1104I | CTCTTC | 2 cut(s) | 335, 759 |
| EarI | CTCTTC | 2 cut(s) | 335, 759 |
| Ecl136II | GAGCTC | 1 cut(s) | 292 |
| EclXI | CGGCCG | 1 cut(s) | 55 |
| Eco105I | TACGTA | 2 cut(s) | 584, 600 |
| Eco24I | GRGCYC | 2 cut(s) | 64, 294 |
| Eco31I | GGTCTC | 1 cut(s) | 116 |
| Eco47I | GGWCC | 4 cut(s) | 184, 365, 445, 664 |
| Eco47III | AGCGCT | 1 cut(s) | 239 |
| Eco52I | CGGCCG | 1 cut(s) | 55 |
| Eco53kI | GAGCTC | 1 cut(s) | 292 |
| Eco57I | CTGAAG | 3 cut(s) | 316, 471, 947 |
| EcoICRI | GAGCTC | 1 cut(s) | 292 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 902 |
| EcoO109I | RGGNCCY | 1 cut(s) | 664 |
| EcoRII | CCWGG | 4 cut(s) | 83, 264, 666, 937 |
| EcoT38I | GRGCYC | 2 cut(s) | 64, 294 |
| FaeI | CATG | 5 cut(s) | 637, 662, 837, 856, 866 |
| FaqI | GGGAC | 2 cut(s) | 351, 431 |
| FatI | CATG | 5 cut(s) | 633, 658, 833, 852, 862 |
| FauI | CCCGC | 3 cut(s) | 238, 305, 849 |
| FbaI | TGATCA | 1 cut(s) | 1084 |
| FblI | GTMKAC | 2 cut(s) | 318, 838 |
| Fnu4HI | GCNGC | 8 cut(s) | 437, 549, 609, 627, 630, 650, 704, 1104 |
| FriOI | GRGCYC | 2 cut(s) | 64, 294 |
| Fsp4HI | GCNGC | 8 cut(s) | 437, 549, 609, 627, 630, 650, 704, 1104 |
| FspBI | CTAG | 1 cut(s) | 612 |
| GlaI | GCGC | 5 cut(s) | 160, 239, 337, 502, 504 |
| GluI | GCNGC | 8 cut(s) | 437, 549, 609, 627, 630, 650, 704, 1104 |
| HaeII | RGCGCY | 2 cut(s) | 241, 339 |
| HaeIII | GGCC | 5 cut(s) | 5, 57, 88, 93, 129 |
| HapII | CCGG | 9 cut(s) | 54, 58, 72, 90, 126, 156, 339, 461, 961 |
| HgaI | GACGC | 1 cut(s) | 139 |
| HhaI | GCGC | 5 cut(s) | 161, 240, 338, 503, 505 |
| Hin1I | GRCGYC | 2 cut(s) | 150, 315 |
| Hin1II | CATG | 5 cut(s) | 637, 662, 837, 856, 866 |
| Hin6I | GCGC | 5 cut(s) | 159, 238, 336, 501, 503 |
| HinP1I | GCGC | 5 cut(s) | 159, 238, 336, 501, 503 |
| HincII | GTYRAC | 1 cut(s) | 319 |
| HindII | GTYRAC | 1 cut(s) | 319 |
| HinfI | GANTC | 2 cut(s) | 102, 1026 |
| HpaII | CCGG | 9 cut(s) | 54, 58, 72, 90, 126, 156, 339, 461, 961 |
| HphI | GGTGA | 5 cut(s) | 8, 145, 286, 958, 1094 |
| Hpy166II | GTNNAC | 2 cut(s) | 319, 839 |
| Hpy188I | TCNGA | 5 cut(s) | 66, 107, 252, 927, 1122 |
| Hpy188III | TCNNGA | 6 cut(s) | 40, 170, 220, 461, 659, 1034 |
| Hpy8I | GTNNAC | 2 cut(s) | 319, 839 |
| Hpy99I | CGWCG | 4 cut(s) | 284, 317, 320, 1035 |
| HpyAV | CCTTC | 3 cut(s) | 44, 141, 665 |
| HpyCH4III | ACNGT | 2 cut(s) | 29, 197 |
| HpyCH4IV | ACGT | 4 cut(s) | 279, 315, 583, 599 |
| HpyCH4V | TGCA | 4 cut(s) | 118, 424, 1016, 1106 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 156, 509, 617, 626, 1112 |
| HpyF3I | CTNAG | 3 cut(s) | 573, 867, 1128 |
| HpySE526I | ACGT | 4 cut(s) | 279, 315, 583, 599 |
| Hsp92I | GRCGYC | 2 cut(s) | 150, 315 |
| Hsp92II | CATG | 5 cut(s) | 637, 662, 837, 856, 866 |
| HspAI | GCGC | 5 cut(s) | 159, 238, 336, 501, 503 |
| Kpn2I | TCCGGA | 1 cut(s) | 460 |
| Ksp22I | TGATCA | 1 cut(s) | 1084 |
| KspI | CCGCGG | 1 cut(s) | 246 |
| Kzo9I | GATC | 3 cut(s) | 66, 74, 1084 |
| LmnI | GCTCC | 7 cut(s) | 245, 289, 413, 530, 617, 940, 1100 |
| Lsp1109I | GCAGC | 6 cut(s) | 535, 595, 613, 616, 661, 1090 |
| LweI | GCATC | 1 cut(s) | 213 |
| MaeI | CTAG | 1 cut(s) | 612 |
| MaeII | ACGT | 4 cut(s) | 279, 315, 583, 599 |
| MaeIII | GTNAC | 3 cut(s) | 151, 197, 823 |
| MalI | GATC | 3 cut(s) | 68, 76, 1086 |
| MboI | GATC | 3 cut(s) | 66, 74, 1084 |
| MboII | GAAGA | 5 cut(s) | 322, 737, 776, 872, 940 |
| MflI | RGATCY | 2 cut(s) | 66, 74 |
| MhlI | GDGCHC | 4 cut(s) | 34, 64, 294, 862 |
| MlsI | TGGCCA | 1 cut(s) | 5 |
| MluCI | AATT | 7 cut(s) | 253, 477, 520, 718, 733, 776, 884 |
| MluNI | TGGCCA | 1 cut(s) | 5 |
| MlyI | GAGTC | 1 cut(s) | 111 |
| MmeI | TCCRAC | 1 cut(s) | 1044 |
| Mox20I | TGGCCA | 1 cut(s) | 5 |
| MroI | TCCGGA | 1 cut(s) | 460 |
| MscI | TGGCCA | 1 cut(s) | 5 |
| MseI | TTAA | 4 cut(s) | 480, 542, 717, 1110 |
| MslI | CAYNNNNRTG | 1 cut(s) | 27 |
| Msp20I | TGGCCA | 1 cut(s) | 5 |
| MspA1I | CMGCKG | 2 cut(s) | 245, 703 |
| MspI | CCGG | 9 cut(s) | 54, 58, 72, 90, 126, 156, 339, 461, 961 |
| MspR9I | CCNGG | 7 cut(s) | 59, 72, 85, 90, 266, 668, 939 |
| MvaI | CCWGG | 4 cut(s) | 85, 266, 668, 939 |
| MvnI | CGCG | 4 cut(s) | 245, 300, 503, 1035 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 156, 509, 617, 626, 1112 |
| NciI | CCSGG | 3 cut(s) | 59, 72, 90 |
| NdeII | GATC | 3 cut(s) | 66, 74, 1084 |
| NlaIII | CATG | 5 cut(s) | 637, 662, 837, 856, 866 |
| NlaIV | GGNNCC | 6 cut(s) | 31, 68, 76, 367, 388, 447 |
| NmuCI | GTSAC | 2 cut(s) | 151, 197 |
| NruI | TCGCGA | 1 cut(s) | 1035 |
| NspI | RCATGY | 2 cut(s) | 837, 866 |
| OliI | CACNNNNGTG | 1 cut(s) | 27 |
| PagI | TCATGA | 1 cut(s) | 658 |
| PauI | GCGCGC | 1 cut(s) | 501 |
| PciI | ACATGT | 1 cut(s) | 833 |
| PfeI | GAWTC | 1 cut(s) | 1026 |
| PflFI | GACNNNGTC | 1 cut(s) | 314 |
| PfoI | TCCNGGA | 1 cut(s) | 666 |
| PkrI | GCNGC | 8 cut(s) | 438, 550, 610, 628, 631, 651, 705, 1105 |
| PleI | GAGTC | 1 cut(s) | 110 |
| PpsI | GAGTC | 1 cut(s) | 110 |
| Ppu21I | YACGTR | 2 cut(s) | 584, 600 |
| PpuMI | RGGWCCY | 1 cut(s) | 664 |
| PscI | ACATGT | 1 cut(s) | 833 |
| Psp124BI | GAGCTC | 1 cut(s) | 294 |
| Psp5II | RGGWCCY | 1 cut(s) | 664 |
| Psp6I | CCWGG | 4 cut(s) | 83, 264, 666, 937 |
| PspGI | CCWGG | 4 cut(s) | 83, 264, 666, 937 |
| PspN4I | GGNNCC | 6 cut(s) | 31, 68, 76, 367, 388, 447 |
| PspPI | GGNCC | 7 cut(s) | 87, 92, 128, 184, 365, 445, 664 |
| PspPPI | RGGWCCY | 1 cut(s) | 664 |
| PsuI | RGATCY | 2 cut(s) | 66, 74 |
| PsyI | GACNNNGTC | 1 cut(s) | 314 |
| PteI | GCGCGC | 1 cut(s) | 501 |
| RruI | TCGCGA | 1 cut(s) | 1035 |
| RsaI | GTAC | 1 cut(s) | 598 |
| RsaNI | GTAC | 1 cut(s) | 597 |
| RseI | CAYNNNNRTG | 1 cut(s) | 27 |
| SacI | GAGCTC | 1 cut(s) | 294 |
| SacII | CCGCGG | 1 cut(s) | 246 |
| SalI | GTCGAC | 1 cut(s) | 317 |
| SaqAI | TTAA | 4 cut(s) | 480, 542, 717, 1110 |
| SatI | GCNGC | 8 cut(s) | 437, 549, 609, 627, 630, 650, 704, 1104 |
| Sau3AI | GATC | 3 cut(s) | 66, 74, 1084 |
| Sau96I | GGNCC | 7 cut(s) | 87, 92, 128, 184, 365, 445, 664 |
| SchI | GAGTC | 1 cut(s) | 111 |
| ScrFI | CCNGG | 7 cut(s) | 59, 72, 85, 90, 266, 668, 939 |
| SduI | GDGCHC | 4 cut(s) | 34, 64, 294, 862 |
| SfaNI | GCATC | 1 cut(s) | 213 |
| SfcI | CTRYAG | 1 cut(s) | 1139 |
| Sfr303I | CCGCGG | 1 cut(s) | 246 |
| SgrAI | CRCCGGYG | 2 cut(s) | 155, 338 |
| SgrBI | CCGCGG | 1 cut(s) | 246 |
| SinI | GGWCC | 4 cut(s) | 184, 365, 445, 664 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 27 |
| SmlI | CTYRAG | 2 cut(s) | 38, 644 |
| SmoI | CTYRAG | 2 cut(s) | 38, 644 |
| SnaBI | TACGTA | 2 cut(s) | 584, 600 |
| Sse9I | AATT | 7 cut(s) | 253, 477, 520, 718, 733, 776, 884 |
| SsiI | CCGC | 9 cut(s) | 140, 243, 245, 298, 411, 437, 703, 856, 912 |
| SspMI | CTAG | 1 cut(s) | 612 |
| SstI | GAGCTC | 1 cut(s) | 294 |
| StyD4I | CCNGG | 7 cut(s) | 57, 70, 83, 88, 264, 666, 937 |
| TaaI | ACNGT | 2 cut(s) | 29, 197 |
| TaiI | ACGT | 4 cut(s) | 282, 318, 586, 602 |
| TaqI | TCGA | 2 cut(s) | 271, 318 |
| TaqII | GACCGA | 1 cut(s) | 172 |
| TasI | AATT | 7 cut(s) | 253, 477, 520, 718, 733, 776, 884 |
| TauI | GCSGC | 2 cut(s) | 439, 706 |
| TfiI | GAWTC | 1 cut(s) | 1026 |
| Tru1I | TTAA | 4 cut(s) | 480, 542, 717, 1110 |
| Tru9I | TTAA | 4 cut(s) | 480, 542, 717, 1110 |
| TscAI | CASTG | 1 cut(s) | 168 |
| TseFI | GTSAC | 2 cut(s) | 151, 197 |
| TseI | GCWGC | 6 cut(s) | 548, 608, 626, 629, 649, 1103 |
| Tsp45I | GTSAC | 2 cut(s) | 151, 197 |
| TspDTI | ATGAA | 2 cut(s) | 777, 788 |
| TspGWI | ACGGA | 2 cut(s) | 200, 1019 |
| TspRI | CASTG | 1 cut(s) | 168 |
| Tth111I | GACNNNGTC | 1 cut(s) | 314 |
| VpaK11BI | GGWCC | 4 cut(s) | 184, 365, 445, 664 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 902 |
| XapI | RAATTY | 1 cut(s) | 253 |
| XceI | RCATGY | 2 cut(s) | 837, 866 |
| XmiI | GTMKAC | 2 cut(s) | 318, 838 |
| XspI | CTAG | 1 cut(s) | 612 |
| ZraI | GACGTC | 1 cut(s) | 316 |