Nuclear pore complex protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G14810 AT1G14810 |
| fragaria_vesca | FvH4_4g33450 |
| malus_domestica | MD13G1019500.v1.1 MD13G1041100.v1.1 MD16G1017700.v1.1 |
| prunus_persica | Prupe.1G334400_v2.0.a1 |
| pyrus_communis | pycom13g01660 pycom13g03540 pycom16g01600 |
| rosa_chinensis | RchiOBHm_Chr2g0166251 RchiOBHm_Chr4g0442761 |
| rosa_laevigata | RLG00000005986 RLG00000021601 |
| rosa_multiflora | Rmu_sc0000595.1_g000031 Rmu_sc0007974.1_g000012 Rmu_sc0025004.1_g000001 Rmu_ssc0000204.1_g000022 |
| rosa_roxburghii | Rroxscaffold_2G00085050 |
| rosa_rugosa | Rorug02G0521600 Rorug04G0342800 |
| rosa_samantha | Rh2AG587600 Rh2AG587700 Rh2BG599500 Rh2BG599600 Rh2CG570000 Rh2CG570500 Rh2DG609600 Rh4BG408100 Rh4CG423900 Rh5CG565000 |
| rosa_wichuraiana | Rw0G003920 Rw2G048980 Rw4G034170 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 172 |
| AclWI | GGATC | 1 cut(s) | 237 |
| AcsI | RAATTY | 1 cut(s) | 274 |
| AgsI | TTSAA | 1 cut(s) | 221 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 85 |
| AjiI | CACGTC | 1 cut(s) | 115 |
| AluBI | AGCT | 1 cut(s) | 10 |
| AluI | AGCT | 1 cut(s) | 10 |
| AlwI | GGATC | 1 cut(s) | 237 |
| ApeKI | GCWGC | 1 cut(s) | 16 |
| ApoI | RAATTY | 1 cut(s) | 274 |
| BbvI | GCAGC | 1 cut(s) | 28 |
| BfaI | CTAG | 1 cut(s) | 35 |
| BfuAI | ACCTGC | 1 cut(s) | 172 |
| BglII | AGATCT | 1 cut(s) | 223 |
| BisI | GCNGC | 1 cut(s) | 17 |
| BlsI | GCNGC | 1 cut(s) | 18 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 85 |
| BmgBI | CACGTC | 1 cut(s) | 115 |
| BpmI | CTGGAG | 1 cut(s) | 218 |
| BpuEI | CTTGAG | 1 cut(s) | 32 |
| BsaBI | GATNNNNATC | 1 cut(s) | 228 |
| Bse1I | ACTGG | 1 cut(s) | 47 |
| Bse8I | GATNNNNATC | 1 cut(s) | 228 |
| BseJI | GATNNNNATC | 1 cut(s) | 228 |
| BseNI | ACTGG | 1 cut(s) | 47 |
| BseXI | GCAGC | 1 cut(s) | 28 |
| Bsp143I | GATC | 2 cut(s) | 223, 229 |
| BspHI | TCATGA | 1 cut(s) | 25 |
| BspMI | ACCTGC | 1 cut(s) | 172 |
| BspPI | GGATC | 1 cut(s) | 237 |
| BsrI | ACTGG | 1 cut(s) | 47 |
| BssMI | GATC | 2 cut(s) | 223, 229 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 263 |
| BstKTI | GATC | 2 cut(s) | 226, 232 |
| BstMBI | GATC | 2 cut(s) | 223, 229 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 16, 208, 263 |
| BstV1I | GCAGC | 1 cut(s) | 28 |
| BstX2I | RGATCY | 2 cut(s) | 223, 229 |
| BstYI | RGATCY | 2 cut(s) | 223, 229 |
| BtrI | CACGTC | 1 cut(s) | 115 |
| BtsIMutI | CAGTG | 1 cut(s) | 74 |
| BveI | ACCTGC | 1 cut(s) | 172 |
| CciI | TCATGA | 1 cut(s) | 25 |
| CviAII | CATG | 2 cut(s) | 26, 269 |
| CviJI | RGCY | 2 cut(s) | 10, 46 |
| CviKI_1 | RGCY | 2 cut(s) | 10, 46 |
| DpnI | GATC | 2 cut(s) | 225, 231 |
| DpnII | GATC | 2 cut(s) | 223, 229 |
| DriI | GACNNNNNGTC | 1 cut(s) | 85 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 85 |
| FaeI | CATG | 2 cut(s) | 29, 272 |
| FaiI | YATR | 5 cut(s) | 27, 125, 133, 135, 270 |
| FatI | CATG | 2 cut(s) | 25, 268 |
| Fnu4HI | GCNGC | 1 cut(s) | 17 |
| Fsp4HI | GCNGC | 1 cut(s) | 17 |
| FspBI | CTAG | 1 cut(s) | 35 |
| GluI | GCNGC | 1 cut(s) | 17 |
| GsuI | CTGGAG | 1 cut(s) | 218 |
| Hin1II | CATG | 2 cut(s) | 29, 272 |
| Hpy188III | TCNNGA | 5 cut(s) | 26, 35, 90, 227, 235 |
| HpyAV | CCTTC | 1 cut(s) | 32 |
| HpyCH4IV | ACGT | 1 cut(s) | 114 |
| HpyCH4V | TGCA | 2 cut(s) | 167, 190 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 16, 208, 263 |
| HpySE526I | ACGT | 1 cut(s) | 114 |
| Hsp92II | CATG | 2 cut(s) | 29, 272 |
| Kzo9I | GATC | 2 cut(s) | 223, 229 |
| LpnPI | CCDG | 5 cut(s) | 60, 177, 185, 212, 248 |
| Lsp1109I | GCAGC | 1 cut(s) | 28 |
| MaeI | CTAG | 1 cut(s) | 35 |
| MaeII | ACGT | 1 cut(s) | 114 |
| MaeIII | GTNAC | 1 cut(s) | 49 |
| MalI | GATC | 2 cut(s) | 225, 231 |
| MboI | GATC | 2 cut(s) | 223, 229 |
| MboII | GAAGA | 1 cut(s) | 233 |
| MfeI | CAATTG | 1 cut(s) | 97 |
| MflI | RGATCY | 2 cut(s) | 223, 229 |
| MluCI | AATT | 5 cut(s) | 97, 126, 191, 240, 274 |
| MnlI | CCTC | 2 cut(s) | 22, 208 |
| MseI | TTAA | 1 cut(s) | 286 |
| MunI | CAATTG | 1 cut(s) | 97 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 16, 208, 263 |
| NdeII | GATC | 2 cut(s) | 223, 229 |
| NlaIII | CATG | 2 cut(s) | 29, 272 |
| PagI | TCATGA | 1 cut(s) | 25 |
| PkrI | GCNGC | 1 cut(s) | 18 |
| PsuI | RGATCY | 2 cut(s) | 223, 229 |
| SaqAI | TTAA | 1 cut(s) | 286 |
| SatI | GCNGC | 1 cut(s) | 17 |
| Sau3AI | GATC | 2 cut(s) | 223, 229 |
| SetI | ASST | 5 cut(s) | 12, 33, 117, 166, 219 |
| SmlI | CTYRAG | 1 cut(s) | 11 |
| SmoI | CTYRAG | 1 cut(s) | 11 |
| Sse9I | AATT | 5 cut(s) | 97, 126, 191, 240, 274 |
| SspMI | CTAG | 1 cut(s) | 35 |
| TaiI | ACGT | 1 cut(s) | 117 |
| TasI | AATT | 5 cut(s) | 97, 126, 191, 240, 274 |
| Tru1I | TTAA | 1 cut(s) | 286 |
| Tru9I | TTAA | 1 cut(s) | 286 |
| TscAI | CASTG | 1 cut(s) | 74 |
| TseI | GCWGC | 1 cut(s) | 16 |
| TspDTI | ATGAA | 1 cut(s) | 120 |
| TspRI | CASTG | 1 cut(s) | 74 |
| XapI | RAATTY | 1 cut(s) | 274 |
| XbaI | TCTAGA | 1 cut(s) | 34 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 242 |
| XspI | CTAG | 1 cut(s) | 35 |