Prupe.1G433700_v2.0.a1

No description available

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Reverse (-)
37095625 .. 37097825
2201 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G433700.1

Sequence Viewer

Length: 954 bp
ATGCACGCCAAGACCGACTCGGAGGTCACGAGCCTCGCGGCGTCGTCTCCCACCAGATCTCCCCGCCGCCCAGTCTACTACGTCCAGAGCCCCTCACGTGACTCGCACGACGGCGAGAAGACCACGACGTCGTTTCAGTCCACCCCCGTGCTCAGCCCCGTCGGCTCCCCGCCCCACTCTCACTCCTCCGTCGGCCGCCACTCCCGCGAGTCCTCCTCCACCCGGTTCTCCGGGTCTCTGAAACCCGGATCCAGAAAGATCAACCCCAACGACGGGTCGCGCCACCACCGGAAGGGTCAGAAGCCGTGGAAGGAGCAGGCTGTGATCGAAGAGGAAGGCCTTCTGGAAGGCGAAGAGGGGTCCAAGGGCTTTCCTCGCCGCTGTTATTTTCCCGCTTTCGTCCTCGGCTTCTTCCTGCTATTCTCTATGTTCTCTCTGATTCTCTGGGGTGCCAGTAAGCCCATGAAACCCAAGATCACCATGAAGAGTGTTACGTTCGAACAGTTCAAGATTCAAGCTGGCTCGGATGCTACTGGCGTGGCCACTGATATGATCTCAGTCAATTCGACAGTGAAGTTCACATTTCGCAACACTGGCACATTCTTCGGGATGCACGTCTCGCCAAAACCCCTAGATCTATCCTACTCCCAAATCACCATAGCCTCTGGAACTATTAAGAAGTTTTATCAGTCGAGAAAAAGCCAGAGATCGATCTCTGTGTCAGTGATCGGCAATAAAATTCCGCTTTATGGCAGTGGCGCGAGCATGAGCACCTCAACAGGGACGACGGCGCTGCCAGTGCCTCTCCAATTGAACTTCGTGATTCGATCTCGAGCCTACGTCTTGGGCAAGCTGGTGAAGCCAAAATTCAACAGGCGAATTCAGTGTTCTGTAACTTTCGATCCCAAAAAGCTCAACGTTCCAATCTCGCTCAAGAATTGCACCACTAGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

318

Amino Acids

34.82

Weight (kDa)

10.27

Isoelectric Point (pI)

56.81

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 23, 127
AatII GACGTC 1 cut(s) 131
AccB1I GGYRCC 1 cut(s) 449
AccI GTMKAC 1 cut(s) 75
AccII CGCG 4 cut(s) 38, 207, 280, 761
AciI CCGC 9 cut(s) 38, 64, 67, 170, 196, 205, 379, 393, 743
AclI AACGTT 1 cut(s) 918
AclWI GGATC 3 cut(s) 243, 256, 896
AcoI YGGCCR 2 cut(s) 193, 540
AcsI RAATTY 3 cut(s) 738, 866, 879
AcvI CACGTG 1 cut(s) 98
AcyI GRCGYC 2 cut(s) 41, 128
AfiI CCNNNNNNNGG 6 cut(s) 222, 272, 273, 292, 749, 780
AgsI TTSAA 4 cut(s) 508, 515, 814, 871
AhlI ACTAGT 1 cut(s) 947
AjiI CACGTC 1 cut(s) 616
AleI CACNNNNGTG 1 cut(s) 146
AluBI AGCT 3 cut(s) 518, 853, 913
AluI AGCT 3 cut(s) 518, 853, 913
Alw21I GWGCWC 2 cut(s) 153, 773
Alw26I GTCTC 3 cut(s) 51, 240, 622
AlwI GGATC 3 cut(s) 243, 256, 896
Ama87I CYCGRG 1 cut(s) 831
AoxI GGCC 3 cut(s) 193, 337, 540
ApeKI GCWGC 1 cut(s) 793
ApoI RAATTY 3 cut(s) 738, 866, 879
Asp700I GAANNNNTTC 1 cut(s) 339
AspLEI GCGC 3 cut(s) 282, 761, 793
AspS9I GGNCC 1 cut(s) 360
AsuC2I CCSGG 3 cut(s) 223, 232, 246
AsuHPI GGTGA 3 cut(s) 469, 646, 868
AsuII TTCGAA 1 cut(s) 498
AvaI CYCGRG 1 cut(s) 831
AvaII GGWCC 1 cut(s) 360
BalI TGGCCA 1 cut(s) 542
BamHI GGATCC 1 cut(s) 248
BanI GGYRCC 1 cut(s) 449
BanII GRGCYC 1 cut(s) 92
BauI CACGAG 1 cut(s) 28
BbrPI CACGTG 1 cut(s) 98
BbsI GAAGAC 1 cut(s) 125
Bbv12I GWGCWC 2 cut(s) 153, 773
BbvI GCAGC 1 cut(s) 780
BceAI ACGGC 3 cut(s) 127, 289, 804
BcgI CGANNNNNNTGC 4 cut(s) 586, 620, 775, 809
BcnI CCSGG 3 cut(s) 223, 232, 246
BcoDI GTCTC 3 cut(s) 51, 240, 622
BcuI ACTAGT 1 cut(s) 947
BfaI CTAG 2 cut(s) 632, 948
BfoI RGCGCY 1 cut(s) 794
BglI GCCNNNNNGGC 1 cut(s) 162
BglII AGATCT 2 cut(s) 56, 634
BisI GCNGC 5 cut(s) 39, 67, 196, 379, 794
BlpI GCTNAGC 1 cut(s) 152
BlsI GCNGC 5 cut(s) 40, 68, 197, 380, 795
Bme1390I CCNGG 3 cut(s) 223, 232, 246
Bme18I GGWCC 1 cut(s) 360
BmeT110I CYCGRG 1 cut(s) 831
BmgBI CACGTC 1 cut(s) 616
BmgT120I GGNCC 1 cut(s) 360
BmiI GGNNCC 4 cut(s) 166, 250, 361, 451
BmrFI CCNGG 3 cut(s) 223, 232, 246
BmrI ACTGGG 1 cut(s) 65
BmsI GCATC 2 cut(s) 517, 600
BmuI ACTGGG 1 cut(s) 65
BpiI GAAGAC 1 cut(s) 125
BplI GAGNNNNNCTC 2 cut(s) 200, 232
Bpu1102I GCTNAGC 1 cut(s) 152
Bpu14I TTCGAA 1 cut(s) 498
BpuEI CTTGAG 1 cut(s) 917
BpuMI CCSGG 3 cut(s) 223, 232, 246
Bsa29I ATCGAT 1 cut(s) 710
BsaAI YACGTR 1 cut(s) 98
BsaHI GRCGYC 2 cut(s) 41, 128
BsaI GGTCTC 1 cut(s) 240
BsaJI CCNNGG 3 cut(s) 305, 363, 403
BsaWI WCCGGW 1 cut(s) 288
BsaXI ACNNNNNCTCC 4 cut(s) 43, 73, 167, 197
Bsc4I CCNNNNNNNGG 6 cut(s) 222, 272, 273, 292, 749, 780
Bse1I ACTGG 5 cut(s) 71, 453, 538, 598, 797
BseCI ATCGAT 1 cut(s) 710
BseDI CCNNGG 3 cut(s) 305, 363, 403
BseGI GGATG 2 cut(s) 532, 615
BseLI CCNNNNNNNGG 6 cut(s) 222, 272, 273, 292, 749, 780
BseMII CTCAG 2 cut(s) 166, 570
BseNI ACTGG 5 cut(s) 71, 453, 538, 598, 797
BseRI GAGGAG 2 cut(s) 175, 205
BseX3I CGGCCG 1 cut(s) 193
BseXI GCAGC 1 cut(s) 780
Bsh1236I CGCG 4 cut(s) 38, 207, 280, 761
Bsh1285I CGRYCG 1 cut(s) 196
BshFI GGCC 3 cut(s) 195, 339, 542
BshNI GGYRCC 1 cut(s) 449
BshVI ATCGAT 1 cut(s) 710
BsiEI CGRYCG 1 cut(s) 196
BsiHKAI GWGCWC 2 cut(s) 153, 773
BsiHKCI CYCGRG 1 cut(s) 831
BsiSI CCGG 4 cut(s) 223, 231, 246, 289
BslFI GGGAC 1 cut(s) 796
BslI CCNNNNNNNGG 6 cut(s) 222, 272, 273, 292, 749, 780
BsmAI GTCTC 3 cut(s) 51, 240, 622
BsmBI CGTCTC 2 cut(s) 51, 622
BsmFI GGGAC 1 cut(s) 796
BsnI GGCC 3 cut(s) 195, 339, 542
Bso31I GGTCTC 1 cut(s) 240
BsoBI CYCGRG 1 cut(s) 831
Bsp119I TTCGAA 1 cut(s) 498
Bsp1286I GDGCHC 3 cut(s) 92, 153, 773
Bsp1720I GCTNAGC 1 cut(s) 152
BspACI CCGC 9 cut(s) 38, 64, 67, 170, 196, 205, 379, 393, 743
BspANI GGCC 3 cut(s) 195, 339, 542
BspCNI CTCAG 2 cut(s) 165, 569
BspDI ATCGAT 1 cut(s) 710
BspFNI CGCG 4 cut(s) 38, 207, 280, 761
BspLI GGNNCC 4 cut(s) 166, 250, 361, 451
BspPI GGATC 3 cut(s) 243, 256, 896
BspT104I TTCGAA 1 cut(s) 498
BspT107I GGYRCC 1 cut(s) 449
BspTNI GGTCTC 1 cut(s) 240
BsrI ACTGG 5 cut(s) 71, 453, 538, 598, 797
BssECI CCNNGG 3 cut(s) 305, 363, 403
BssNI GRCGYC 2 cut(s) 41, 128
BssSI CACGAG 1 cut(s) 28
BssT1I CCWWGG 1 cut(s) 363
Bst2BI CACGAG 1 cut(s) 28
Bst4CI ACNGT 2 cut(s) 504, 571
Bst6I CTCTTC 3 cut(s) 324, 348, 479
BstACI GRCGYC 2 cut(s) 41, 128
BstBAI YACGTR 1 cut(s) 98
BstBI TTCGAA 1 cut(s) 498
BstC8I GCNNGC 5 cut(s) 6, 318, 520, 763, 851
BstDEI CTNAG 2 cut(s) 152, 556
BstDSI CCRYGG 1 cut(s) 305
BstF5I GGATG 2 cut(s) 532, 615
BstFNI CGCG 4 cut(s) 38, 207, 280, 761
BstH2I RGCGCY 1 cut(s) 794
BstHHI GCGC 3 cut(s) 282, 761, 793
BstMAI GTCTC 3 cut(s) 51, 240, 622
BstMCI CGRYCG 1 cut(s) 196
BstMWI GCNNNNNNNGC 7 cut(s) 162, 204, 375, 594, 619, 799, 859
BstSCI CCNGG 3 cut(s) 221, 230, 244
BstUI CGCG 4 cut(s) 38, 207, 280, 761
BstV1I GCAGC 1 cut(s) 780
BstV2I GAAGAC 1 cut(s) 125
BstX2I RGATCY 3 cut(s) 56, 248, 634
BstYI RGATCY 3 cut(s) 56, 248, 634
BstZI CGGCCG 1 cut(s) 193
Bsu15I ATCGAT 1 cut(s) 710
BsuRI GGCC 3 cut(s) 195, 339, 542
BsuTUI ATCGAT 1 cut(s) 710
BtgI CCRYGG 1 cut(s) 305
BtrI CACGTC 1 cut(s) 616
BtsCI GGATG 2 cut(s) 532, 615
BtsI GCAGTG 1 cut(s) 760
BtsIMutI CAGTG 7 cut(s) 543, 576, 591, 729, 760, 804, 890
Cac8I GCNNGC 5 cut(s) 6, 318, 520, 763, 851
CfoI GCGC 3 cut(s) 282, 761, 793
Cfr13I GGNCC 1 cut(s) 360
ClaI ATCGAT 1 cut(s) 710
CseI GACGC 1 cut(s) 30
CviAII CATG 3 cut(s) 463, 481, 766
DdeI CTNAG 2 cut(s) 152, 556
DrdI GACNNNNNNGTC 2 cut(s) 23, 127
DseDI GACNNNNNNGTC 2 cut(s) 23, 127
EaeI YGGCCR 2 cut(s) 193, 540
EagI CGGCCG 1 cut(s) 193
Eam1104I CTCTTC 3 cut(s) 324, 348, 479
EarI CTCTTC 3 cut(s) 324, 348, 479
EclXI CGGCCG 1 cut(s) 193
Eco130I CCWWGG 1 cut(s) 363
Eco147I AGGCCT 1 cut(s) 339
Eco24I GRGCYC 1 cut(s) 92
Eco31I GGTCTC 1 cut(s) 240
Eco47I GGWCC 1 cut(s) 360
Eco52I CGGCCG 1 cut(s) 193
Eco72I CACGTG 1 cut(s) 98
Eco88I CYCGRG 1 cut(s) 831
EcoRI GAATTC 1 cut(s) 879
EcoT14I CCWWGG 1 cut(s) 363
EcoT38I GRGCYC 1 cut(s) 92
ErhI CCWWGG 1 cut(s) 363
Esp3I CGTCTC 2 cut(s) 51, 622
FaeI CATG 3 cut(s) 466, 484, 769
FaiI YATR 7 cut(s) 428, 464, 482, 551, 659, 750, 767
FaqI GGGAC 1 cut(s) 796
FatI CATG 3 cut(s) 462, 480, 765
FauI CCCGC 4 cut(s) 71, 177, 212, 400
FblI GTMKAC 1 cut(s) 75
Fnu4HI GCNGC 5 cut(s) 39, 67, 196, 379, 794
FokI GGATG 2 cut(s) 539, 622
FriOI GRGCYC 1 cut(s) 92
Fsp4HI GCNGC 5 cut(s) 39, 67, 196, 379, 794
FspBI CTAG 2 cut(s) 632, 948
GlaI GCGC 3 cut(s) 281, 760, 792
GluI GCNGC 5 cut(s) 39, 67, 196, 379, 794
HaeII RGCGCY 1 cut(s) 794
HaeIII GGCC 3 cut(s) 195, 339, 542
HapII CCGG 4 cut(s) 223, 231, 246, 289
HgaI GACGC 1 cut(s) 30
HhaI GCGC 3 cut(s) 282, 761, 793
Hin1I GRCGYC 2 cut(s) 41, 128
Hin1II CATG 3 cut(s) 466, 484, 769
Hin6I GCGC 3 cut(s) 280, 759, 791
HinP1I GCGC 3 cut(s) 280, 759, 791
HinfI GANTC 6 cut(s) 17, 101, 209, 439, 511, 823
HpaII CCGG 4 cut(s) 223, 231, 246, 289
HphI GGTGA 3 cut(s) 469, 646, 868
Hpy166II GTNNAC 3 cut(s) 76, 141, 579
Hpy188I TCNGA 5 cut(s) 22, 240, 300, 438, 526
Hpy8I GTNNAC 3 cut(s) 76, 141, 579
Hpy99I CGWCG 8 cut(s) 46, 113, 130, 133, 164, 194, 275, 790
HpyAV CCTTC 5 cut(s) 286, 304, 329, 341, 350
HpyCH4III ACNGT 2 cut(s) 504, 571
HpyCH4IV ACGT 7 cut(s) 81, 97, 128, 494, 615, 840, 918
HpyCH4V TGCA 3 cut(s) 4, 613, 942
HpyF10VI GCNNNNNNNGC 7 cut(s) 162, 204, 375, 594, 619, 799, 859
HpyF3I CTNAG 2 cut(s) 152, 556
HpySE526I ACGT 7 cut(s) 81, 97, 128, 494, 615, 840, 918
Hsp92I GRCGYC 2 cut(s) 41, 128
Hsp92II CATG 3 cut(s) 466, 484, 769
HspAI GCGC 3 cut(s) 280, 759, 791
LmnI GCTCC 2 cut(s) 170, 313
Lsp1109I GCAGC 1 cut(s) 780
LweI GCATC 2 cut(s) 517, 600
MaeI CTAG 2 cut(s) 632, 948
MaeII ACGT 7 cut(s) 81, 97, 128, 494, 615, 840, 918
MaeIII GTNAC 4 cut(s) 25, 98, 490, 892
MboII GAAGA 6 cut(s) 130, 341, 365, 403, 496, 595
MfeI CAATTG 1 cut(s) 809
MflI RGATCY 3 cut(s) 56, 248, 634
MhlI GDGCHC 3 cut(s) 92, 153, 773
MlsI TGGCCA 1 cut(s) 542
MluCI AATT 6 cut(s) 562, 738, 809, 866, 879, 937
MluNI TGGCCA 1 cut(s) 542
MlyI GAGTC 3 cut(s) 11, 95, 218
Mox20I TGGCCA 1 cut(s) 542
MroXI GAANNNNTTC 1 cut(s) 339
MscI TGGCCA 1 cut(s) 542
MseI TTAA 1 cut(s) 675
MslI CAYNNNNRTG 2 cut(s) 146, 548
Msp20I TGGCCA 1 cut(s) 542
MspA1I CMGCKG 1 cut(s) 381
MspI CCGG 4 cut(s) 223, 231, 246, 289
MspR9I CCNGG 3 cut(s) 223, 232, 246
MunI CAATTG 1 cut(s) 809
MvnI CGCG 4 cut(s) 38, 207, 280, 761
MwoI GCNNNNNNNGC 7 cut(s) 162, 204, 375, 594, 619, 799, 859
NciI CCSGG 3 cut(s) 223, 232, 246
NlaIII CATG 3 cut(s) 466, 484, 769
NlaIV GGNNCC 4 cut(s) 166, 250, 361, 451
NmeAIII GCCGAG 1 cut(s) 384
NmuCI GTSAC 2 cut(s) 25, 98
NspV TTCGAA 1 cut(s) 498
OliI CACNNNNGTG 1 cut(s) 146
PaeR7I CTCGAG 1 cut(s) 831
PceI AGGCCT 1 cut(s) 339
PcsI WCGNNNNNNNCGW 3 cut(s) 12, 26, 612
PdmI GAANNNNTTC 1 cut(s) 339
PfeI GAWTC 3 cut(s) 439, 511, 823
PkrI GCNGC 5 cut(s) 40, 68, 197, 380, 795
PleI GAGTC 3 cut(s) 11, 95, 217
PmaCI CACGTG 1 cut(s) 98
PmlI CACGTG 1 cut(s) 98
PpsI GAGTC 3 cut(s) 11, 95, 217
Ppu21I YACGTR 1 cut(s) 98
Psp1406I AACGTT 1 cut(s) 918
PspCI CACGTG 1 cut(s) 98
PspN4I GGNNCC 4 cut(s) 166, 250, 361, 451
PspPI GGNCC 1 cut(s) 360
PsuI RGATCY 3 cut(s) 56, 248, 634
RseI CAYNNNNRTG 2 cut(s) 146, 548
SaqAI TTAA 1 cut(s) 675
SatI GCNGC 5 cut(s) 39, 67, 196, 379, 794
Sau96I GGNCC 1 cut(s) 360
SchI GAGTC 3 cut(s) 11, 95, 218
ScrFI CCNGG 3 cut(s) 223, 232, 246
SduI GDGCHC 3 cut(s) 92, 153, 773
SfaNI GCATC 2 cut(s) 517, 600
Sfr274I CTCGAG 1 cut(s) 831
SfuI TTCGAA 1 cut(s) 498
SinI GGWCC 1 cut(s) 360
SlaI CTCGAG 1 cut(s) 831
SmiMI CAYNNNNRTG 2 cut(s) 146, 548
SmlI CTYRAG 2 cut(s) 831, 932
SmoI CTYRAG 2 cut(s) 831, 932
SpeI ACTAGT 1 cut(s) 947
Sse9I AATT 6 cut(s) 562, 738, 809, 866, 879, 937
SseBI AGGCCT 1 cut(s) 339
SsiI CCGC 9 cut(s) 38, 64, 67, 170, 196, 205, 379, 393, 743
SspMI CTAG 2 cut(s) 632, 948
StuI AGGCCT 1 cut(s) 339
StyD4I CCNGG 3 cut(s) 221, 230, 244
StyI CCWWGG 1 cut(s) 363
TaaI ACNGT 2 cut(s) 504, 571
TaiI ACGT 7 cut(s) 84, 100, 131, 497, 618, 843, 921
TaqI TCGA 8 cut(s) 327, 498, 566, 692, 710, 826, 832, 900
TaqII GACCGA 1 cut(s) 29
TasI AATT 6 cut(s) 562, 738, 809, 866, 879, 937
TauI GCSGC 4 cut(s) 41, 69, 198, 381
TfiI GAWTC 3 cut(s) 439, 511, 823
Tru1I TTAA 1 cut(s) 675
Tru9I TTAA 1 cut(s) 675
TscAI CASTG 7 cut(s) 550, 576, 598, 729, 760, 804, 890
TseFI GTSAC 2 cut(s) 25, 98
TseI GCWGC 1 cut(s) 793
Tsp45I GTSAC 2 cut(s) 25, 98
TspDTI ATGAA 2 cut(s) 479, 497
TspGWI ACGGA 1 cut(s) 178
TspRI CASTG 7 cut(s) 550, 576, 598, 729, 760, 804, 890
VpaK11BI GGWCC 1 cut(s) 360
XapI RAATTY 3 cut(s) 738, 866, 879
XhoI CTCGAG 1 cut(s) 831
XmiI GTMKAC 1 cut(s) 75
XmnI GAANNNNTTC 1 cut(s) 339
XspI CTAG 2 cut(s) 632, 948
ZraI GACGTC 1 cut(s) 129
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.