Prupe.7G132000_v2.0.a1

Late embryogenesis abundant protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
OG0003196
Physical Location & Seq
Forward (+)
15093713 .. 15095404
1692 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G132000.1

Sequence Viewer

Length: 954 bp
ATGTCAGTGCTGGCCAAGACTGACTCTGAGGTGAGCAGCCTCAGCCAGTCCTCACCGGCGCGCTCGCCCCGCCGGGCGGCCTACTATGTCCAGAGCCCATCCCGCGACTCGCACGATGGCGAAAAGACCACCAACTCCTTCAACTCCAGCCCAGTCCTCAGCCCTATGGGCTCCCCTCCTCACTCTCACTCCAACTCTTCTCTTGGGCCTCACTCTCGCGAGTCCGCCTCCACCCGCTTCTCGGGATCCCGCAGTAAGAACCACCACGGCGGTGGGTCCCACCGCAAGGGGTGGAGACCGTGGAAGGATCAGTTTGGTTCCATTGAAGAAGAAGGCCTTCTTGATGATGATGGCACCAAGCATGGTCTCACTCGCAGGTGTTACTTCGTTGCTTTTATTGTGGGCTTCCTTGGGCTTTTCTCTCTGTTTTCTTTGATTCTGTGGGGTGCTAGTAGGCCCCAAAAGCCCATTGTCACTATGAAGAGCATTGCATTTGATCAATTTGTGGTTCAAGCTGGAGAGGATTTCTCAGGAGTGGCCACCAACATGTTGTCCATGAATTCCACACTGAAGTTCACCTTTCGTAACACCGCCACATTTTTCGGTGTCCATGTGAAACCAACACCTCTAGATCTCTCATATTCTCAGCTCACTGTAGCCACTGGAACTATGAAGGGATTTTATCAATCGAGAAAGAGCCAGAGATCCATTACAATAACGTTGATAGGAAACAGAATTCCAGTCTATGGTGGAGGAGCAAACTTGGGAAGCTCAAATGGTGCACCCACTCAGGCAGTGCCATTGACACTCAGGTTCCTGGTTAGGTCAAGAGCTTATGTTTTGGGCCAGCTGGTCAAACCCAAGTTCCACAGAAGGGTGGATTGCTCCGTGATTATGGATCCTAAAAAGATGAATGTGGCCATTGCTTTGAAGAGCAAATGCAATTACCAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LEA_2

Protein Analysis

318

Amino Acids

34.7

Weight (kDa)

10.19

Isoelectric Point (pI)

53.12

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 366
Acc36I ACCTGC 1 cut(s) 366
AccB1I GGYRCC 1 cut(s) 353
AccB7I CCANNNNNTGG 1 cut(s) 746
AccII CGCG 3 cut(s) 61, 105, 219
AciI CCGC 9 cut(s) 70, 77, 103, 225, 235, 250, 270, 283, 591
AclI AACGTT 1 cut(s) 719
AclWI GGATC 6 cut(s) 240, 253, 315, 699, 893, 906
AcoI YGGCCR 3 cut(s) 12, 537, 918
AcsI RAATTY 2 cut(s) 559, 735
AcuI CTGAAG 1 cut(s) 590
AfiI CCNNNNNNNGG 5 cut(s) 76, 241, 286, 746, 874
AflIII ACRYGT 1 cut(s) 546
AgsI TTSAA 4 cut(s) 142, 326, 512, 931
AjnI CCWGG 1 cut(s) 816
AleI CACNNNNGTG 1 cut(s) 270
AluBI AGCT 5 cut(s) 515, 649, 771, 833, 850
AluI AGCT 5 cut(s) 515, 649, 771, 833, 850
Alw21I GWGCWC 1 cut(s) 784
Alw26I GTCTC 2 cut(s) 289, 371
Alw44I GTGCAC 1 cut(s) 780
AlwI GGATC 6 cut(s) 240, 253, 315, 699, 893, 906
Ama87I CYCGRG 1 cut(s) 241
AoxI GGCC 8 cut(s) 12, 78, 206, 334, 455, 537, 844, 918
ApaLI GTGCAC 1 cut(s) 780
ApeKI GCWGC 1 cut(s) 36
ApoI RAATTY 2 cut(s) 559, 735
Asp700I GAANNNNTTC 1 cut(s) 336
AspLEI GCGC 2 cut(s) 61, 63
AspS9I GGNCC 4 cut(s) 206, 276, 456, 844
AsuC2I CCSGG 1 cut(s) 74
AsuHPI GGTGA 3 cut(s) 43, 45, 568
AvaI CYCGRG 1 cut(s) 241
AvaII GGWCC 1 cut(s) 276
BaeGI GKGCMC 1 cut(s) 784
BalI TGGCCA 3 cut(s) 14, 539, 920
BamHI GGATCC 2 cut(s) 245, 898
BanI GGYRCC 1 cut(s) 353
BanII GRGCYC 2 cut(s) 98, 173
Bbv12I GWGCWC 1 cut(s) 784
BbvCI CCTCAGC 2 cut(s) 41, 158
BbvI GCAGC 1 cut(s) 48
BccI CCATC 3 cut(s) 106, 110, 344
BceAI ACGGC 1 cut(s) 283
BciT130I CCWGG 1 cut(s) 818
BclI TGATCA 1 cut(s) 496
BcnI CCSGG 1 cut(s) 74
BcoDI GTCTC 2 cut(s) 289, 371
BfaI CTAG 2 cut(s) 450, 629
BfmI CTRYAG 1 cut(s) 654
BfuAI ACCTGC 1 cut(s) 366
BglI GCCNNNNNGGC 1 cut(s) 168
BglII AGATCT 1 cut(s) 631
BisI GCNGC 2 cut(s) 37, 78
BlsI GCNGC 2 cut(s) 38, 79
Bme1390I CCNGG 2 cut(s) 74, 818
Bme18I GGWCC 1 cut(s) 276
BmeT110I CYCGRG 1 cut(s) 241
BmgT120I GGNCC 4 cut(s) 206, 276, 456, 844
BmiI GGNNCC 9 cut(s) 172, 247, 277, 278, 319, 355, 458, 815, 900
BmrFI CCNGG 2 cut(s) 74, 818
BmrI ACTGGG 1 cut(s) 146
BmuI ACTGGG 1 cut(s) 146
BplI GAGNNNNNCTC 4 cut(s) 212, 244, 512, 544
BpmI CTGGAG 2 cut(s) 130, 537
Bpu10I CCTNAGC 2 cut(s) 41, 158
BpuMI CCSGG 1 cut(s) 74
BsaI GGTCTC 2 cut(s) 289, 371
BsaJI CCNNGG 3 cut(s) 265, 299, 409
BsaXI ACNNNNNCTCC 2 cut(s) 173, 203
Bsc4I CCNNNNNNNGG 5 cut(s) 76, 241, 286, 746, 874
Bse118I RCCGGY 1 cut(s) 55
Bse1I ACTGG 5 cut(s) 46, 152, 667, 740, 949
Bse3DI GCAATG 2 cut(s) 486, 921
BseBI CCWGG 1 cut(s) 818
BseDI CCNNGG 3 cut(s) 265, 299, 409
BseGI GGATG 1 cut(s) 98
BseLI CCNNNNNNNGG 5 cut(s) 76, 241, 286, 746, 874
BseMI GCAATG 2 cut(s) 486, 921
BseMII CTCAG 7 cut(s) 18, 55, 172, 543, 659, 803, 823
BseNI ACTGG 5 cut(s) 46, 152, 667, 740, 949
BsePI GCGCGC 1 cut(s) 59
BseRI GAGGAG 2 cut(s) 168, 768
BseSI GKGCMC 1 cut(s) 784
BseXI GCAGC 1 cut(s) 48
Bsh1236I CGCG 3 cut(s) 61, 105, 219
BshFI GGCC 8 cut(s) 14, 80, 208, 336, 457, 539, 846, 920
BshNI GGYRCC 1 cut(s) 353
BsiHKAI GWGCWC 1 cut(s) 784
BsiHKCI CYCGRG 1 cut(s) 241
BsiSI CCGG 2 cut(s) 56, 73
BslFI GGGAC 1 cut(s) 262
BslI CCNNNNNNNGG 5 cut(s) 76, 241, 286, 746, 874
BsmAI GTCTC 2 cut(s) 289, 371
BsmFI GGGAC 1 cut(s) 262
BsnI GGCC 8 cut(s) 14, 80, 208, 336, 457, 539, 846, 920
Bso31I GGTCTC 2 cut(s) 289, 371
BsoBI CYCGRG 1 cut(s) 241
Bsp1286I GDGCHC 3 cut(s) 98, 173, 784
Bsp143I GATC 6 cut(s) 245, 307, 496, 631, 704, 898
Bsp68I TCGCGA 1 cut(s) 219
BspACI CCGC 9 cut(s) 70, 77, 103, 225, 235, 250, 270, 283, 591
BspANI GGCC 8 cut(s) 14, 80, 208, 336, 457, 539, 846, 920
BspCNI CTCAG 7 cut(s) 19, 54, 171, 542, 658, 802, 822
BspFNI CGCG 3 cut(s) 61, 105, 219
BspLI GGNNCC 9 cut(s) 172, 247, 277, 278, 319, 355, 458, 815, 900
BspMI ACCTGC 1 cut(s) 366
BspPI GGATC 6 cut(s) 240, 253, 315, 699, 893, 906
BspQI GCTCTTC 2 cut(s) 476, 926
BspT107I GGYRCC 1 cut(s) 353
BspTNI GGTCTC 2 cut(s) 289, 371
BsrDI GCAATG 2 cut(s) 486, 921
BsrFI RCCGGY 1 cut(s) 55
BsrI ACTGG 5 cut(s) 46, 152, 667, 740, 949
BssAI RCCGGY 1 cut(s) 55
BssECI CCNNGG 3 cut(s) 265, 299, 409
BssHII GCGCGC 1 cut(s) 59
BssMI GATC 6 cut(s) 245, 307, 496, 631, 704, 898
BssT1I CCWWGG 1 cut(s) 409
Bst2UI CCWGG 1 cut(s) 818
Bst4CI ACNGT 2 cut(s) 300, 655
Bst6I CTCTTC 3 cut(s) 202, 476, 926
BstC8I GCNNGC 4 cut(s) 12, 61, 65, 848
BstDEI CTNAG 7 cut(s) 27, 41, 158, 529, 645, 789, 809
BstDSI CCRYGG 2 cut(s) 265, 299
BstF5I GGATG 1 cut(s) 98
BstFNI CGCG 3 cut(s) 61, 105, 219
BstHHI GCGC 2 cut(s) 61, 63
BstKTI GATC 6 cut(s) 248, 310, 499, 634, 707, 901
BstMAI GTCTC 2 cut(s) 289, 371
BstMBI GATC 6 cut(s) 245, 307, 496, 631, 704, 898
BstMWI GCNNNNNNNGC 5 cut(s) 42, 69, 102, 168, 463
BstNI CCWGG 1 cut(s) 818
BstNSI RCATGY 1 cut(s) 550
BstSCI CCNGG 2 cut(s) 72, 816
BstSFI CTRYAG 1 cut(s) 654
BstSLI GKGCMC 1 cut(s) 784
BstUI CGCG 3 cut(s) 61, 105, 219
BstV1I GCAGC 1 cut(s) 48
BstX2I RGATCY 4 cut(s) 245, 631, 704, 898
BstXI CCANNNNNNTGG 1 cut(s) 272
BstYI RGATCY 4 cut(s) 245, 631, 704, 898
BsuRI GGCC 8 cut(s) 14, 80, 208, 336, 457, 539, 846, 920
BtgI CCRYGG 2 cut(s) 265, 299
BtsCI GGATG 1 cut(s) 98
BtsI GCAGTG 1 cut(s) 801
BtsIMutI CAGTG 5 cut(s) 12, 566, 651, 660, 801
BtuMI TCGCGA 1 cut(s) 219
BveI ACCTGC 1 cut(s) 366
Cac8I GCNNGC 4 cut(s) 12, 61, 65, 848
CfoI GCGC 2 cut(s) 61, 63
Cfr10I RCCGGY 1 cut(s) 55
Cfr13I GGNCC 4 cut(s) 206, 276, 456, 844
CviAII CATG 4 cut(s) 362, 547, 556, 611
DdeI CTNAG 7 cut(s) 27, 41, 158, 529, 645, 789, 809
DpnI GATC 6 cut(s) 247, 309, 498, 633, 706, 900
DpnII GATC 6 cut(s) 245, 307, 496, 631, 704, 898
EaeI YGGCCR 3 cut(s) 12, 537, 918
Eam1104I CTCTTC 3 cut(s) 202, 476, 926
EarI CTCTTC 3 cut(s) 202, 476, 926
EciI GGCGGA 1 cut(s) 214
Eco130I CCWWGG 1 cut(s) 409
Eco147I AGGCCT 1 cut(s) 336
Eco24I GRGCYC 2 cut(s) 98, 173
Eco31I GGTCTC 2 cut(s) 289, 371
Eco47I GGWCC 1 cut(s) 276
Eco57I CTGAAG 1 cut(s) 590
Eco88I CYCGRG 1 cut(s) 241
EcoO109I RGGNCCY 2 cut(s) 276, 456
EcoRI GAATTC 2 cut(s) 559, 735
EcoRII CCWGG 1 cut(s) 816
EcoT14I CCWWGG 1 cut(s) 409
EcoT38I GRGCYC 2 cut(s) 98, 173
ErhI CCWWGG 1 cut(s) 409
FaeI CATG 4 cut(s) 365, 550, 559, 614
FalI AAGNNNNNCTT 6 cut(s) 321, 353, 324, 356, 563, 595
FaqI GGGAC 1 cut(s) 262
FatI CATG 4 cut(s) 361, 546, 555, 610
FauI CCCGC 4 cut(s) 77, 110, 242, 257
FbaI TGATCA 1 cut(s) 496
Fnu4HI GCNGC 2 cut(s) 37, 78
FokI GGATG 1 cut(s) 85
FriOI GRGCYC 2 cut(s) 98, 173
Fsp4HI GCNGC 2 cut(s) 37, 78
FspBI CTAG 2 cut(s) 450, 629
GlaI GCGC 2 cut(s) 60, 62
GluI GCNGC 2 cut(s) 37, 78
GsuI CTGGAG 2 cut(s) 130, 537
HaeIII GGCC 8 cut(s) 14, 80, 208, 336, 457, 539, 846, 920
HapII CCGG 2 cut(s) 56, 73
HhaI GCGC 2 cut(s) 61, 63
Hin1II CATG 4 cut(s) 365, 550, 559, 614
Hin6I GCGC 2 cut(s) 59, 61
HinP1I GCGC 2 cut(s) 59, 61
HinfI GANTC 4 cut(s) 23, 107, 221, 436
HpaII CCGG 2 cut(s) 56, 73
HphI GGTGA 3 cut(s) 43, 45, 568
Hpy166II GTNNAC 2 cut(s) 576, 782
Hpy188I TCNGA 1 cut(s) 28
Hpy188III TCNNGA 8 cut(s) 91, 218, 243, 341, 531, 629, 690, 828
Hpy8I GTNNAC 2 cut(s) 576, 782
HpyAV CCTTC 6 cut(s) 148, 298, 326, 347, 667, 867
HpyCH4III ACNGT 2 cut(s) 300, 655
HpyCH4IV ACGT 1 cut(s) 719
HpyCH4V TGCA 3 cut(s) 491, 782, 942
HpyF10VI GCNNNNNNNGC 5 cut(s) 42, 69, 102, 168, 463
HpyF3I CTNAG 7 cut(s) 27, 41, 158, 529, 645, 789, 809
HpySE526I ACGT 1 cut(s) 719
Hsp92II CATG 4 cut(s) 365, 550, 559, 614
HspAI GCGC 2 cut(s) 59, 61
KflI GGGWCCC 1 cut(s) 276
Ksp22I TGATCA 1 cut(s) 496
Kzo9I GATC 6 cut(s) 245, 307, 496, 631, 704, 898
LguI GCTCTTC 2 cut(s) 476, 926
LmnI GCTCC 3 cut(s) 176, 755, 890
Lsp1109I GCAGC 1 cut(s) 48
MaeI CTAG 2 cut(s) 450, 629
MaeII ACGT 1 cut(s) 719
MaeIII GTNAC 3 cut(s) 380, 472, 584
MalI GATC 6 cut(s) 247, 309, 498, 633, 706, 900
MboI GATC 6 cut(s) 245, 307, 496, 631, 704, 898
MboII GAAGA 5 cut(s) 189, 338, 341, 493, 943
MflI RGATCY 4 cut(s) 245, 631, 704, 898
MhlI GDGCHC 3 cut(s) 98, 173, 784
MlsI TGGCCA 3 cut(s) 14, 539, 920
MluCI AATT 4 cut(s) 500, 559, 735, 943
MluNI TGGCCA 3 cut(s) 14, 539, 920
MlyI GAGTC 3 cut(s) 17, 101, 230
MmeI TCCRAC 1 cut(s) 216
Mox20I TGGCCA 3 cut(s) 14, 539, 920
MroXI GAANNNNTTC 1 cut(s) 336
MscI TGGCCA 3 cut(s) 14, 539, 920
MslI CAYNNNNRTG 2 cut(s) 270, 545
Msp20I TGGCCA 3 cut(s) 14, 539, 920
MspA1I CMGCKG 1 cut(s) 850
MspI CCGG 2 cut(s) 56, 73
MspR9I CCNGG 2 cut(s) 74, 818
MvaI CCWGG 1 cut(s) 818
MvnI CGCG 3 cut(s) 61, 105, 219
MwoI GCNNNNNNNGC 5 cut(s) 42, 69, 102, 168, 463
NciI CCSGG 1 cut(s) 74
NdeII GATC 6 cut(s) 245, 307, 496, 631, 704, 898
NlaIII CATG 4 cut(s) 365, 550, 559, 614
NlaIV GGNNCC 9 cut(s) 172, 247, 277, 278, 319, 355, 458, 815, 900
NmuCI GTSAC 1 cut(s) 472
NruI TCGCGA 1 cut(s) 219
NspI RCATGY 1 cut(s) 550
OliI CACNNNNGTG 1 cut(s) 270
PaqCI CACCTGC 1 cut(s) 366
PauI GCGCGC 1 cut(s) 59
PceI AGGCCT 1 cut(s) 336
PciI ACATGT 1 cut(s) 546
PciSI GCTCTTC 2 cut(s) 476, 926
PdmI GAANNNNTTC 1 cut(s) 336
PfeI GAWTC 1 cut(s) 436
PflMI CCANNNNNTGG 1 cut(s) 746
PkrI GCNGC 2 cut(s) 38, 79
PleI GAGTC 3 cut(s) 17, 101, 229
PpsI GAGTC 3 cut(s) 17, 101, 229
PpuMI RGGWCCY 1 cut(s) 276
PscI ACATGT 1 cut(s) 546
Psp1406I AACGTT 1 cut(s) 719
Psp5II RGGWCCY 1 cut(s) 276
Psp6I CCWGG 1 cut(s) 816
PspGI CCWGG 1 cut(s) 816
PspN4I GGNNCC 9 cut(s) 172, 247, 277, 278, 319, 355, 458, 815, 900
PspPI GGNCC 4 cut(s) 206, 276, 456, 844
PspPPI RGGWCCY 1 cut(s) 276
PsuI RGATCY 4 cut(s) 245, 631, 704, 898
PteI GCGCGC 1 cut(s) 59
PvuII CAGCTG 1 cut(s) 850
RruI TCGCGA 1 cut(s) 219
RseI CAYNNNNRTG 2 cut(s) 270, 545
SapI GCTCTTC 2 cut(s) 476, 926
SatI GCNGC 2 cut(s) 37, 78
Sau3AI GATC 6 cut(s) 245, 307, 496, 631, 704, 898
Sau96I GGNCC 4 cut(s) 206, 276, 456, 844
SchI GAGTC 3 cut(s) 17, 101, 230
ScrFI CCNGG 2 cut(s) 74, 818
SduI GDGCHC 3 cut(s) 98, 173, 784
SfcI CTRYAG 1 cut(s) 654
SgrAI CRCCGGYG 1 cut(s) 55
SinI GGWCC 1 cut(s) 276
SmiMI CAYNNNNRTG 2 cut(s) 270, 545
Sse9I AATT 4 cut(s) 500, 559, 735, 943
SseBI AGGCCT 1 cut(s) 336
SsiI CCGC 9 cut(s) 70, 77, 103, 225, 235, 250, 270, 283, 591
SspMI CTAG 2 cut(s) 450, 629
StuI AGGCCT 1 cut(s) 336
StyD4I CCNGG 2 cut(s) 72, 816
StyI CCWWGG 1 cut(s) 409
TaaI ACNGT 2 cut(s) 300, 655
TaiI ACGT 1 cut(s) 722
TaqI TCGA 1 cut(s) 689
TasI AATT 4 cut(s) 500, 559, 735, 943
TauI GCSGC 1 cut(s) 80
TfiI GAWTC 1 cut(s) 436
TscAI CASTG 5 cut(s) 12, 573, 658, 667, 801
TseFI GTSAC 1 cut(s) 472
TseI GCWGC 1 cut(s) 36
Tsp45I GTSAC 1 cut(s) 472
TspDTI ATGAA 4 cut(s) 494, 572, 686, 926
TspGWI ACGGA 1 cut(s) 877
TspRI CASTG 5 cut(s) 12, 573, 658, 667, 801
Van91I CCANNNNNTGG 1 cut(s) 746
VneI GTGCAC 1 cut(s) 780
VpaK11BI GGWCC 1 cut(s) 276
XapI RAATTY 2 cut(s) 559, 735
XbaI TCTAGA 1 cut(s) 628
XceI RCATGY 1 cut(s) 550
XcmI CCANNNNNNNNNTGG 1 cut(s) 269
XmnI GAANNNNTTC 1 cut(s) 336
XspI CTAG 2 cut(s) 450, 629
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.