Prupe.1G570900_v2.0.a1

Kinetochore protein Nuf2

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Forward (+)
46491795 .. 46498565
6771 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G570900.1

Sequence Viewer

Length: 1338 bp
ATGTCCAAGTTCGAATTCCCTAAGCTGAGTCGCAACGACATAGTCACAATCCTCGCCGACTCTCAGATCATCGCCATTTCTGACCGCGATCTTGTCAACCCAAACCCGGATTTCGTCGCCGACCTCTTCGCCCGGATCCTCAGCCATATCGACTTCCTCCACGAGGAAGATTATGAGCAAGTTGAGTTTGCTGCCTTGGAGCAACTTGAGAACCCGGATCTTCACGTTGACTCGGCTCGGAGCATGAAGCTGTACAACAGGATGAAGGAAGTGGTGGCCTTAGTAGATTGCCCTAAGAGATTCACCCTAAAAGATCTGATAAGACCAGAGACGGATCGAACTGAATATTTTCTCAGTGCAATTCTCAATTTTTGCCTTCACAGAGAGACAAAAATGAATATCCTTACCAAAGTTGTGGATCAAGTAACTGATATTGATGAGCAACGCAACAGGTGGGAGGACAGGATTTCCCAGTTGAATGCAGAGATTGCGGAATACAATGAAGCAAGAGAAAAGGAGTTACCTCTTGTTCAAGAGGTAGATGCAAAAGTAAAAGAATTGCGCCAAACAATTGCAGGCCTTAACAATCAGCAAATGTCACTGAGAACTTCTCTTCGAAAGTTGAAGGAGAAGACTGGAGAAATGGAGGAAAAGATTTCTAGCGCTGAGTTTGCTCTGGTACAAAGTGTCCAAGAAAGTGCAAATCTACGTTCAAGAATTGTTCAATCACCAGATAAACTGCAGAGGGCTTTAGAAGAGAAGAAATCTGTTCGGGAGGAGGCAAAGAATTTTGAAAGGTCAGCAATGCAATCTTTTAAGGAGAAAACTGATGTTGATGAGGTTTATACAAAGGTCTCAAAGAAATTGTCAAAGCACTTGGCCCAGATGCAGGCTATACAAGAACAGGTCAATTCTGCTAAATCTGTCGACAGAGATTTTAAGGCTGTGAAAGCTAAATTAGCTGATGATGGAGTCCTAAGCAGGTCTCTTCAGGCCAAACTGGTTGAACGGGAAGGAAAAGTGGAACAGTTTAATGAATTAAAAAAGCAGCTAGAAAAAGATAGAGATCTAAAGTTTGAGGAGGCTTCTAAAGAACTTAATAATGTGAAGCTGGAGGTGGAATCTAGGAGGCGTGATATGGAAGCAAGGCAAAGGGATGTCGAAGCTGCAGTAGCAGAGGTGGATTCTATCACAGCAAAGACTACATCAATAAAAGAATCTGGAGCATCTCATCAGAAACAATTAGCACGTAAATGTGAGGAGATCATGAAAGAGTTCTACCAATATCAAAACTCAATTAGGTTCCTGCTGCCAATGCCTGATGGAGAGAGACAATAG

Protein Analysis

446

Amino Acids

51.6

Weight (kDa)

5.64

Isoelectric Point (pI)

41.72

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 972
AccI GTMKAC 1 cut(s) 927
AccII CGCG 1 cut(s) 87
AciI CCGC 2 cut(s) 85, 491
AclWI GGATC 5 cut(s) 130, 143, 225, 342, 426
AcsI RAATTY 2 cut(s) 14, 787
AcuI CTGAAG 1 cut(s) 974
AfaI GTAC 2 cut(s) 254, 681
AfeI AGCGCT 1 cut(s) 664
AfiI CCNNNNNNNGG 3 cut(s) 106, 163, 889
AgsI TTSAA 7 cut(s) 478, 533, 625, 714, 725, 794, 1007
AjuI GAANNNNNNNTTGG 1 cut(s) 31
AluBI AGCT 7 cut(s) 25, 250, 953, 962, 1051, 1111, 1166
AluI AGCT 7 cut(s) 25, 250, 953, 962, 1051, 1111, 1166
Alw26I GTCTC 5 cut(s) 323, 380, 859, 990, 1324
AlwI GGATC 5 cut(s) 130, 143, 225, 342, 426
Aor51HI AGCGCT 1 cut(s) 664
AoxI GGCC 4 cut(s) 276, 577, 879, 993
ApeKI GCWGC 4 cut(s) 191, 1048, 1166, 1309
ApoI RAATTY 2 cut(s) 14, 787
ArsI GACNNNNNNTTYG 2 cut(s) 851, 883
Asp700I GAANNNNTTC 2 cut(s) 348, 1274
AspLEI GCGC 2 cut(s) 564, 665
AspS9I GGNCC 1 cut(s) 880
AsuC2I CCSGG 3 cut(s) 107, 133, 215
AsuHPI GGTGA 2 cut(s) 295, 720
AsuII TTCGAA 2 cut(s) 12, 616
BamHI GGATCC 1 cut(s) 135
BauI CACGAG 1 cut(s) 161
BbsI GAAGAC 1 cut(s) 638
BbvCI CCTCAGC 1 cut(s) 140
BbvI GCAGC 4 cut(s) 178, 1060, 1153, 1296
BccI CCATC 2 cut(s) 962, 1316
BcnI CCSGG 3 cut(s) 107, 133, 215
BcoDI GTCTC 5 cut(s) 323, 380, 859, 990, 1324
BfaI CTAG 3 cut(s) 660, 1052, 1125
BfmI CTRYAG 2 cut(s) 740, 1167
BfoI RGCGCY 1 cut(s) 666
BfuAI ACCTGC 1 cut(s) 972
BglII AGATCT 2 cut(s) 313, 1066
BisI GCNGC 4 cut(s) 192, 1049, 1167, 1310
BlsI GCNGC 4 cut(s) 193, 1050, 1168, 1311
Bme1390I CCNGG 3 cut(s) 107, 133, 215
BmgT120I GGNCC 1 cut(s) 880
BmiI GGNNCC 2 cut(s) 137, 1304
BmrFI CCNGG 3 cut(s) 107, 133, 215
BmrI ACTGGG 1 cut(s) 466
BmsI GCATC 3 cut(s) 532, 876, 1235
BmuI ACTGGG 1 cut(s) 466
BpiI GAAGAC 1 cut(s) 638
BplI GAGNNNNNCTC 2 cut(s) 595, 627
BpmI CTGGAG 3 cut(s) 657, 1133, 1242
Bpu10I CCTNAGC 3 cut(s) 21, 140, 977
Bpu14I TTCGAA 2 cut(s) 12, 616
BpuEI CTTGAG 1 cut(s) 227
BpuMI CCSGG 3 cut(s) 107, 133, 215
BsaAI YACGTR 1 cut(s) 1250
BsaBI GATNNNNATC 1 cut(s) 1065
BsaI GGTCTC 2 cut(s) 859, 990
BsaJI CCNNGG 1 cut(s) 195
Bsc4I CCNNNNNNNGG 3 cut(s) 106, 163, 889
Bse1I ACTGG 3 cut(s) 472, 640, 1005
Bse3DI GCAATG 1 cut(s) 810
Bse8I GATNNNNATC 1 cut(s) 1065
BseDI CCNNGG 1 cut(s) 195
BseGI GGATG 2 cut(s) 267, 1162
BseJI GATNNNNATC 1 cut(s) 1065
BseLI CCNNNNNNNGG 3 cut(s) 106, 163, 889
BseMI GCAATG 1 cut(s) 810
BseMII CTCAG 6 cut(s) 17, 77, 154, 367, 593, 657
BseNI ACTGG 3 cut(s) 472, 640, 1005
BseRI GAGGAG 3 cut(s) 791, 1094, 1274
BseXI GCAGC 4 cut(s) 178, 1060, 1153, 1296
Bsh1236I CGCG 1 cut(s) 87
BshFI GGCC 4 cut(s) 278, 579, 881, 995
BsiSI CCGG 3 cut(s) 107, 133, 215
BslI CCNNNNNNNGG 3 cut(s) 106, 163, 889
BsmAI GTCTC 5 cut(s) 323, 380, 859, 990, 1324
BsmBI CGTCTC 1 cut(s) 323
BsmI GAATGC 1 cut(s) 484
BsnI GGCC 4 cut(s) 278, 579, 881, 995
Bso31I GGTCTC 2 cut(s) 859, 990
Bsp119I TTCGAA 2 cut(s) 12, 616
Bsp1407I TGTACA 1 cut(s) 252
Bsp143I GATC 9 cut(s) 66, 88, 135, 217, 313, 334, 418, 1066, 1263
BspACI CCGC 2 cut(s) 85, 491
BspANI GGCC 4 cut(s) 278, 579, 881, 995
BspCNI CTCAG 6 cut(s) 18, 76, 153, 366, 594, 658
BspFNI CGCG 1 cut(s) 87
BspHI TCATGA 1 cut(s) 1266
BspLI GGNNCC 2 cut(s) 137, 1304
BspMAI CTGCAG 2 cut(s) 744, 1171
BspMI ACCTGC 1 cut(s) 972
BspPI GGATC 5 cut(s) 130, 143, 225, 342, 426
BspT104I TTCGAA 2 cut(s) 12, 616
BspTNI GGTCTC 2 cut(s) 859, 990
BsrDI GCAATG 1 cut(s) 810
BsrGI TGTACA 1 cut(s) 252
BsrI ACTGG 3 cut(s) 472, 640, 1005
BssECI CCNNGG 1 cut(s) 195
BssMI GATC 9 cut(s) 66, 88, 135, 217, 313, 334, 418, 1066, 1263
BssSI CACGAG 1 cut(s) 161
BssT1I CCWWGG 1 cut(s) 195
Bst2BI CACGAG 1 cut(s) 161
Bst4CI ACNGT 1 cut(s) 1029
Bst6I CTCTTC 4 cut(s) 131, 618, 750, 993
BstAPI GCANNNNNTGC 1 cut(s) 488
BstAUI TGTACA 1 cut(s) 252
BstBAI YACGTR 1 cut(s) 1250
BstBI TTCGAA 2 cut(s) 12, 616
BstC8I GCNNGC 2 cut(s) 577, 891
BstENI CCTNNNNNAGG 1 cut(s) 161
BstF5I GGATG 2 cut(s) 267, 1162
BstFNI CGCG 1 cut(s) 87
BstH2I RGCGCY 1 cut(s) 666
BstHHI GCGC 2 cut(s) 564, 665
BstKTI GATC 9 cut(s) 69, 91, 138, 220, 316, 337, 421, 1069, 1266
BstMAI GTCTC 5 cut(s) 323, 380, 859, 990, 1324
BstMBI GATC 9 cut(s) 66, 88, 135, 217, 313, 334, 418, 1066, 1263
BstMWI GCNNNNNNNGC 6 cut(s) 488, 671, 950, 959, 1172, 1315
BstSCI CCNGG 3 cut(s) 105, 131, 213
BstSFI CTRYAG 2 cut(s) 740, 1167
BstUI CGCG 1 cut(s) 87
BstV1I GCAGC 4 cut(s) 178, 1060, 1153, 1296
BstV2I GAAGAC 1 cut(s) 638
BstX2I RGATCY 4 cut(s) 135, 217, 313, 1066
BstXI CCANNNNNNTGG 1 cut(s) 415
BstYI RGATCY 4 cut(s) 135, 217, 313, 1066
BsuRI GGCC 4 cut(s) 278, 579, 881, 995
BtgZI GCGATG 1 cut(s) 55
BtsCI GGATG 2 cut(s) 267, 1162
BtsIMutI CAGTG 2 cut(s) 361, 599
BveI ACCTGC 1 cut(s) 972
Cac8I GCNNGC 2 cut(s) 577, 891
CciI TCATGA 1 cut(s) 1266
CfoI GCGC 2 cut(s) 564, 665
Cfr13I GGNCC 1 cut(s) 880
Csp6I GTAC 2 cut(s) 253, 680
CviAII CATG 2 cut(s) 244, 1267
CviQI GTAC 2 cut(s) 253, 680
DpnI GATC 9 cut(s) 68, 90, 137, 219, 315, 336, 420, 1068, 1265
DpnII GATC 9 cut(s) 66, 88, 135, 217, 313, 334, 418, 1066, 1263
Eam1104I CTCTTC 4 cut(s) 131, 618, 750, 993
EarI CTCTTC 4 cut(s) 131, 618, 750, 993
Eco130I CCWWGG 1 cut(s) 195
Eco147I AGGCCT 1 cut(s) 579
Eco31I GGTCTC 2 cut(s) 859, 990
Eco47III AGCGCT 1 cut(s) 664
Eco57I CTGAAG 1 cut(s) 974
EcoNI CCTNNNNNAGG 1 cut(s) 161
EcoRI GAATTC 1 cut(s) 14
EcoT14I CCWWGG 1 cut(s) 195
ErhI CCWWGG 1 cut(s) 195
Esp3I CGTCTC 1 cut(s) 323
FaeI CATG 2 cut(s) 247, 1270
FaiI YATR 8 cut(s) 41, 147, 174, 245, 846, 896, 1139, 1268
FatI CATG 2 cut(s) 243, 1266
FblI GTMKAC 1 cut(s) 927
Fnu4HI GCNGC 4 cut(s) 192, 1049, 1167, 1310
FokI GGATG 2 cut(s) 274, 1169
Fsp4HI GCNGC 4 cut(s) 192, 1049, 1167, 1310
FspBI CTAG 3 cut(s) 660, 1052, 1125
GlaI GCGC 2 cut(s) 563, 664
GluI GCNGC 4 cut(s) 192, 1049, 1167, 1310
GsuI CTGGAG 3 cut(s) 657, 1133, 1242
HaeII RGCGCY 1 cut(s) 666
HaeIII GGCC 4 cut(s) 278, 579, 881, 995
HapII CCGG 3 cut(s) 107, 133, 215
HhaI GCGC 2 cut(s) 564, 665
Hin1II CATG 2 cut(s) 247, 1270
Hin6I GCGC 2 cut(s) 562, 663
HinP1I GCGC 2 cut(s) 562, 663
HincII GTYRAC 3 cut(s) 97, 229, 928
HindII GTYRAC 3 cut(s) 97, 229, 928
HinfI GANTC 8 cut(s) 28, 59, 230, 300, 972, 1121, 1184, 1217
HpaII CCGG 3 cut(s) 107, 133, 215
HphI GGTGA 2 cut(s) 295, 720
Hpy166II GTNNAC 3 cut(s) 97, 229, 928
Hpy188I TCNGA 5 cut(s) 66, 82, 240, 318, 1236
Hpy188III TCNNGA 5 cut(s) 533, 714, 773, 1221, 1267
Hpy8I GTNNAC 3 cut(s) 97, 229, 928
Hpy99I CGWCG 1 cut(s) 119
HpyAV CCTTC 4 cut(s) 259, 386, 619, 1007
HpyCH4III ACNGT 1 cut(s) 1029
HpyCH4IV ACGT 3 cut(s) 225, 709, 1249
HpyCH4V TGCA 9 cut(s) 359, 482, 545, 575, 701, 742, 808, 889, 1169
HpyF10VI GCNNNNNNNGC 6 cut(s) 488, 671, 950, 959, 1172, 1315
HpySE526I ACGT 3 cut(s) 225, 709, 1249
Hsp92II CATG 2 cut(s) 247, 1270
HspAI GCGC 2 cut(s) 562, 663
Kzo9I GATC 9 cut(s) 66, 88, 135, 217, 313, 334, 418, 1066, 1263
LmnI GCTCC 3 cut(s) 199, 240, 1223
Lsp1109I GCAGC 4 cut(s) 178, 1060, 1153, 1296
LweI GCATC 3 cut(s) 532, 876, 1235
MaeI CTAG 3 cut(s) 660, 1052, 1125
MaeII ACGT 3 cut(s) 225, 709, 1249
MaeIII GTNAC 4 cut(s) 43, 424, 519, 597
MalI GATC 9 cut(s) 68, 90, 137, 219, 315, 336, 420, 1068, 1265
MboI GATC 9 cut(s) 66, 88, 135, 217, 313, 334, 418, 1066, 1263
MboII GAAGA 8 cut(s) 118, 179, 212, 605, 643, 767, 772, 980
MfeI CAATTG 1 cut(s) 570
MflI RGATCY 4 cut(s) 135, 217, 313, 1066
MlyI GAGTC 4 cut(s) 37, 53, 224, 981
MroXI GAANNNNTTC 2 cut(s) 348, 1274
MseI TTAA 6 cut(s) 582, 816, 939, 1032, 1040, 1098
MslI CAYNNNNRTG 1 cut(s) 1252
MspI CCGG 3 cut(s) 107, 133, 215
MspR9I CCNGG 3 cut(s) 107, 133, 215
MunI CAATTG 1 cut(s) 570
Mva1269I GAATGC 1 cut(s) 484
MvnI CGCG 1 cut(s) 87
MwoI GCNNNNNNNGC 6 cut(s) 488, 671, 950, 959, 1172, 1315
NciI CCSGG 3 cut(s) 107, 133, 215
NdeII GATC 9 cut(s) 66, 88, 135, 217, 313, 334, 418, 1066, 1263
NlaIII CATG 2 cut(s) 247, 1270
NlaIV GGNNCC 2 cut(s) 137, 1304
NmeAIII GCCGAG 1 cut(s) 212
NmuCI GTSAC 2 cut(s) 43, 597
NspV TTCGAA 2 cut(s) 12, 616
PagI TCATGA 1 cut(s) 1266
PceI AGGCCT 1 cut(s) 579
PctI GAATGC 1 cut(s) 484
PdmI GAANNNNTTC 2 cut(s) 348, 1274
PfeI GAWTC 4 cut(s) 300, 1121, 1184, 1217
PflFI GACNNNGTC 1 cut(s) 41
PkrI GCNGC 4 cut(s) 193, 1050, 1168, 1311
PleI GAGTC 4 cut(s) 36, 53, 224, 980
PpsI GAGTC 4 cut(s) 36, 53, 224, 980
Ppu21I YACGTR 1 cut(s) 1250
PspN4I GGNNCC 2 cut(s) 137, 1304
PspPI GGNCC 1 cut(s) 880
PstI CTGCAG 2 cut(s) 744, 1171
PsuI RGATCY 4 cut(s) 135, 217, 313, 1066
PsyI GACNNNGTC 1 cut(s) 41
RsaI GTAC 2 cut(s) 254, 681
RsaNI GTAC 2 cut(s) 253, 680
RseI CAYNNNNRTG 1 cut(s) 1252
SalI GTCGAC 1 cut(s) 926
SaqAI TTAA 6 cut(s) 582, 816, 939, 1032, 1040, 1098
SatI GCNGC 4 cut(s) 192, 1049, 1167, 1310
Sau3AI GATC 9 cut(s) 66, 88, 135, 217, 313, 334, 418, 1066, 1263
Sau96I GGNCC 1 cut(s) 880
SchI GAGTC 4 cut(s) 37, 53, 224, 981
ScrFI CCNGG 3 cut(s) 107, 133, 215
SfaNI GCATC 3 cut(s) 532, 876, 1235
SfcI CTRYAG 2 cut(s) 740, 1167
SfuI TTCGAA 2 cut(s) 12, 616
SmiMI CAYNNNNRTG 1 cut(s) 1252
SmlI CTYRAG 1 cut(s) 206
SmoI CTYRAG 1 cut(s) 206
SseBI AGGCCT 1 cut(s) 579
SsiI CCGC 2 cut(s) 85, 491
SspI AATATT 1 cut(s) 347
SspMI CTAG 3 cut(s) 660, 1052, 1125
StuI AGGCCT 1 cut(s) 579
StyD4I CCNGG 3 cut(s) 105, 131, 213
StyI CCWWGG 1 cut(s) 195
TaaI ACNGT 1 cut(s) 1029
TaiI ACGT 3 cut(s) 228, 712, 1252
TaqI TCGA 6 cut(s) 12, 150, 337, 616, 927, 1161
TatI WGTACW 1 cut(s) 252
TfiI GAWTC 4 cut(s) 300, 1121, 1184, 1217
Tru1I TTAA 6 cut(s) 582, 816, 939, 1032, 1040, 1098
Tru9I TTAA 6 cut(s) 582, 816, 939, 1032, 1040, 1098
TscAI CASTG 2 cut(s) 361, 606
TseFI GTSAC 2 cut(s) 43, 597
TseI GCWGC 4 cut(s) 191, 1048, 1166, 1309
Tsp45I GTSAC 2 cut(s) 43, 597
TspDTI ATGAA 6 cut(s) 260, 278, 410, 516, 1050, 1283
TspGWI ACGGA 1 cut(s) 347
TspRI CASTG 2 cut(s) 361, 606
Tth111I GACNNNGTC 1 cut(s) 41
XagI CCTNNNNNAGG 1 cut(s) 161
XapI RAATTY 2 cut(s) 14, 787
XmiI GTMKAC 1 cut(s) 927
XmnI GAANNNNTTC 2 cut(s) 348, 1274
XspI CTAG 3 cut(s) 660, 1052, 1125
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.