Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0001453.1

Orthogroup ID

OG0002625

Physical Location & Seq

Genomic Coordinates Forward (+)

43081 .. 52284

Gene Structure 9204 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0001453.1_g000009.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2037 bp

atgatcaccttagtattcgctccgactcggctcatttacacccctacattgaaagtccccgtattaaatttgaggctgagaaagcttcatggagcgaggaacatgattcacaaggatacaaaagaagcccatttcaaaatttgggcccgttggaagaatttggcaaaacatgacgctacgggtttccatttcaaaatatccgagctttgctgggagaagaaaaaagctgccgaagccaaccatggagttggaccctccgaacccaaacttccagccttattccgacccagccctgcccatacagctagcatattggagatcgaggatcgaccactatcaggaggaggagtggcctgtcactcagaagccacccaccacgctctagcattccggatcagacccagcctcaggccaacgtcggacgctatcccagatcgaaaccaaaatcctctgttacctattgcatccaccaaacctgcctcgccaccatcacaacaactccttctgccctgcaaaaaagaggcagatccaaggtcccagatgcgaattggcgcacacaaaatcacatcggagaatagcctccccagaagcgcggcagacaggcatcacgaagagaagcaggctcatcgaaggccaagaaacttgactgcaaaaaccctagggctaggggaagatgagcaagttgattttgatgccttggagctgctcgagaatccggattttcacgacaagtcggcccagagcatcaagctgtacaacacactgaagcaagtggtggcgttattggattgcccgaagaaatttatctacgcagatctcataagacccgacccgaatcggactgaggtttttctgagtgcccttctcaattaccatgtatatagggaagatgagcaagttgattttgatgccttggagcttcttgagaatccggattttcacgacaagtctgcccagagcatcaagctgtacaacacactgaagcaagtggtggcgttattggattgccctaagaaatttatctacgcagatctcataagacccgacccgaatcggactgaggtttttctgagtgcccttctcaattaccatgtatatagagagacaagaatagatctcgtagctaaagttgtggataaattaactgaccttgagaagcagcacatatggtggggcagtcaggtttctcagtggaatgctgagattgcacactacaaagaaacaagagaaaaggagttacctcttgttcaggaggtagattccaaagtcaaagaattgcgccaaaccatatcagaccttaaccttgatcaagtgaaactgagaacttctattaggaagttaaaggagaaggctgctgaaatggataaagagatatctgatgctgattttgatctgctaaaaagtgattcggaaagacaagagtttcgttcaaaaattgttcattcaccagataaactgcagagagctttagcagagaagaaattaattagagagaaggctacgagtgatgaaatgttagccatgcaatctttgaaggagaaaactgctgttgatgaggtgtatgcaaaggtttccaagaaattgttaaagcacttggcccagatgcatgctatacaagaacaggtcaattctgctaaatctactagtaaagactacagggctgtaaaagaaaaaataagtgatgatgaagtcctaagcaaggttcttcatgatgaactaatgaaacagcaatcaaaagtgaaagaattgaatgatttcaaaaagaagttggaaaaagaacgatatctcaagtttgaggaggctagtaaagaactgagtaatgtgaagctggaggtggaatctaggaggtgtgtgctggaagcaaggcaaaagaatgttgaagctacaatagcagaggtggaaactataactgcaaagactgcatcagtaagaaaatctggagcagctgatcagcaacaattagctcgtcgaagtgaggagatcactaaagagttgcaccaatacttatattcaattgggatcttgctccaatgttga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000070 GO:0000228 GO:0000278 GO:0000280 GO:0000775 GO:0000776 GO:0000777 GO:0000778 GO:0000779 GO:0000780 GO:0000793 GO:0000794 GO:0000819 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0005737 GO:0005773 GO:0005774 GO:0005815 GO:0005816 GO:0005856 GO:0005886 GO:0006996 GO:0007049 GO:0007059 GO:0007080 GO:0007127 GO:0008150 GO:0008608 GO:0009987 GO:0015630 GO:0016020 GO:0016043 GO:0022402 GO:0022414 GO:0031090 GO:0031262 GO:0031617 GO:0031974 GO:0031981 GO:0032991 GO:0035974 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044430 GO:0044437 GO:0044444 GO:0044446 GO:0044454 GO:0044464 GO:0045132 GO:0045143 GO:0048285 GO:0050000 GO:0051179 GO:0051234 GO:0051276 GO:0051303 GO:0051310 GO:0051315 GO:0051316 GO:0051321 GO:0051455 GO:0051640 GO:0051641 GO:0051649 GO:0051656 GO:0061982 GO:0070013 GO:0071840 GO:0071944 GO:0098588 GO:0098687 GO:0098805 GO:0098813 GO:0140013 GO:0140014 GO:1903046 GO:1903047

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Nuf2

Protein Analysis

678

Amino Acids

77.68

Weight (kDa)

8.88

Isoelectric Point (pI)

36.89

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002625)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G61000
fragaria_vesca	FvH4_6g25020 FvH4_6g25020 FvH4_6g25020 FvH4_6g25020 FvH4_6g25020 FvH4_6g25020 FvH4_7g06682 FvH4_7g06682 FvH4_7g06682 FvH4_7g06682 FvH4_7g06682
malus_domestica	MD08G1232500.v1.1 MD08G1233000.v1.1 MD15G1425300.v1.1
prunus_persica	Prupe.1G570900_v2.0.a1 Prupe.1G570900_v2.0.a1
pyrus_communis	pycom08g20190 pycom15g37700
rosa_chinensis	RchiOBHm_Chr1g0336301 RchiOBHm_Chr7g0222021
rosa_laevigata	RLG00000002102 RLG00000029374
rosa_multiflora	Rmu_co8043290.1_g000001 Rmu_sc0001453.1_g000009 Rmu_sc0004325.1_g000003
rosa_roxburghii	Rroxscaffold_3G00237490 Rroxscaffold_4G00315800
rosa_rugosa	Rorug01G0123600 Rorug07G0205100
rosa_samantha	Rh1AG144300 Rh1BG113700 Rh1CG135800 Rh1DG150800 Rh7AG345600 Rh7BG336200 Rh7CG363300 Rh7DG343900
rosa_wichuraiana	Rw0G015220 Rw7G029310

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	484
AccII	CGCG	1 cut(s)	593
AccIII	TCCGGA	3 cut(s)	390, 715, 931
AciI	CCGC	1 cut(s)	593
AclWI	GGATC	4 cut(s)	333, 401, 521, 2027
AcsI	RAATTY	5 cut(s)	67, 138, 157, 800, 1016
AcuI	CTGAAG	2 cut(s)	785, 1001
AfaI	GTAC	2 cut(s)	755, 971
AfiI	CCNNNNNNNGG	3 cut(s)	338, 408, 1699
AgsI	TTSAA	9 cut(s)	52, 136, 193, 1431, 1534, 1750, 1759, 1880, 2013
AhlI	ACTAGT	1 cut(s)	1643
Alw26I	GTCTC	1 cut(s)	1097
AlwI	GGATC	4 cut(s)	333, 401, 521, 2027
Ama87I	CYCGRG	1 cut(s)	707
Aor13HI	TCCGGA	3 cut(s)	390, 715, 931
AoxI	GGCC	6 cut(s)	144, 351, 410, 632, 735, 1596
ApaI	GGGCCC	1 cut(s)	148
ApeKI	GCWGC	5 cut(s)	227, 703, 1159, 1352, 1943
ApoI	RAATTY	5 cut(s)	67, 138, 157, 800, 1016
ArsI	GACNNNNNNTTYG	2 cut(s)	1407, 1439
AseI	ATTAAT	1 cut(s)	1484
Asp700I	GAANNNNTTC	1 cut(s)	1754
AspA2I	CCTAGG	1 cut(s)	658
AspLEI	GCGC	3 cut(s)	554, 593, 1281
AspS9I	GGNCC	6 cut(s)	144, 145, 251, 534, 736, 1597
AsuHPI	GGTGA	1 cut(s)	1437
AsuNHI	GCTAGC	1 cut(s)	305
AvaI	CYCGRG	1 cut(s)	707
AvaII	GGWCC	2 cut(s)	251, 534
AvrII	CCTAGG	1 cut(s)	658
AxyI	CCTNAGG	1 cut(s)	407
BaeGI	GKGCMC	3 cut(s)	148, 862, 1078
BanII	GRGCYC	1 cut(s)	148
BbvI	GCAGC	5 cut(s)	214, 690, 1171, 1339, 1955
BccI	CCATC	1 cut(s)	496
BcgI	CGANNNNNNTGC	4 cut(s)	608, 642, 932, 966
BciVI	GTATCC	1 cut(s)	109
BclI	TGATCA	3 cut(s)	3, 1306, 1948
BcoDI	GTCTC	1 cut(s)	1097
BcuI	ACTAGT	1 cut(s)	1643
BfaI	CTAG	7 cut(s)	306, 383, 659, 665, 1644, 1803, 1842
BfmI	CTRYAG	2 cut(s)	1457, 1654
BfuAI	ACCTGC	1 cut(s)	484
BfuI	GTATCC	1 cut(s)	109
BglII	AGATCT	3 cut(s)	814, 1030, 1114
BisI	GCNGC	6 cut(s)	228, 594, 704, 1160, 1353, 1944
BlnI	CCTAGG	1 cut(s)	658
BlsI	GCNGC	6 cut(s)	229, 595, 705, 1161, 1354, 1945
Bme18I	GGWCC	2 cut(s)	251, 534
BmeT110I	CYCGRG	1 cut(s)	707
BmgT120I	GGNCC	6 cut(s)	144, 145, 251, 534, 736, 1597
BmiI	GGNNCC	3 cut(s)	146, 253, 536
BmtI	GCTAGC	1 cut(s)	309
BpmI	CTGGAG	2 cut(s)	1850, 1959
Bpu10I	CCTNAGC	1 cut(s)	1694
BpuEI	CTTGAG	3 cut(s)	944, 1172, 1772
BsaBI	GATNNNNATC	1 cut(s)	1389
BsaJI	CCNNGG	5 cut(s)	241, 530, 658, 696, 912
BsaWI	WCCGGW	3 cut(s)	390, 715, 931
BsaXI	ACNNNNNCTCC	4 cut(s)	333, 363, 483, 513
Bsc4I	CCNNNNNNNGG	3 cut(s)	338, 408, 1699
Bse21I	CCTNAGG	1 cut(s)	407
Bse8I	GATNNNNATC	1 cut(s)	1389
BseAI	TCCGGA	3 cut(s)	390, 715, 931
BseDI	CCNNGG	5 cut(s)	241, 530, 658, 696, 912
BseGI	GGATG	1 cut(s)	464
BseJI	GATNNNNATC	1 cut(s)	1389
BseLI	CCNNNNNNNGG	3 cut(s)	338, 408, 1699
BseRI	GAGGAG	4 cut(s)	357, 360, 1811, 1991
BseSI	GKGCMC	3 cut(s)	148, 862, 1078
BseXI	GCAGC	5 cut(s)	214, 690, 1171, 1339, 1955
BseYI	CCCAGC	3 cut(s)	210, 287, 401
Bsh1236I	CGCG	1 cut(s)	593
BshFI	GGCC	6 cut(s)	146, 353, 412, 634, 737, 1598
BsiHKCI	CYCGRG	1 cut(s)	707
BsiSI	CCGG	3 cut(s)	391, 716, 932
BslFI	GGGAC	2 cut(s)	41, 520
BslI	CCNNNNNNNGG	3 cut(s)	338, 408, 1699
BsmAI	GTCTC	1 cut(s)	1097
BsmFI	GGGAC	2 cut(s)	41, 520
BsmI	GAATGC	2 cut(s)	386, 1201
BsnI	GGCC	6 cut(s)	146, 353, 412, 634, 737, 1598
BsoBI	CYCGRG	1 cut(s)	707
Bsp120I	GGGCCC	1 cut(s)	144
Bsp1286I	GDGCHC	3 cut(s)	148, 862, 1078
Bsp13I	TCCGGA	3 cut(s)	390, 715, 931
Bsp1407I	TGTACA	2 cut(s)	753, 969
Bsp19I	CCATGG	1 cut(s)	241
BspACI	CCGC	1 cut(s)	593
BspANI	GGCC	6 cut(s)	146, 353, 412, 634, 737, 1598
BspEI	TCCGGA	3 cut(s)	390, 715, 931
BspFNI	CGCG	1 cut(s)	593
BspHI	TCATGA	1 cut(s)	1708
BspLI	GGNNCC	3 cut(s)	146, 253, 536
BspMAI	CTGCAG	1 cut(s)	1461
BspMI	ACCTGC	1 cut(s)	484
BspOI	GCTAGC	1 cut(s)	309
BspPI	GGATC	4 cut(s)	333, 401, 521, 2027
BsrGI	TGTACA	2 cut(s)	753, 969
BssECI	CCNNGG	5 cut(s)	241, 530, 658, 696, 912
BssT1I	CCWWGG	5 cut(s)	241, 530, 658, 696, 912
Bst6I	CTCTTC	1 cut(s)	606
BstAPI	GCANNNNNTGC	1 cut(s)	1919
BstAUI	TGTACA	2 cut(s)	753, 969
BstC8I	GCNNGC	3 cut(s)	307, 621, 1608
BstDSI	CCRYGG	1 cut(s)	241
BstENI	CCTNNNNNAGG	1 cut(s)	1697
BstF5I	GGATG	1 cut(s)	464
BstFNI	CGCG	1 cut(s)	593
BstHHI	GCGC	3 cut(s)	554, 593, 1281
BstMAI	GTCTC	1 cut(s)	1097
BstMWI	GCNNNNNNNGC	6 cut(s)	82, 233, 302, 1205, 1889, 1919
BstNSI	RCATGY	1 cut(s)	1610
BstSFI	CTRYAG	2 cut(s)	1457, 1654
BstSLI	GKGCMC	3 cut(s)	148, 862, 1078
BstUI	CGCG	1 cut(s)	593
BstV1I	GCAGC	5 cut(s)	214, 690, 1171, 1339, 1955
BstX2I	RGATCY	5 cut(s)	526, 814, 1030, 1114, 2019
BstXI	CCANNNNNNTGG	1 cut(s)	248
BstYI	RGATCY	5 cut(s)	526, 814, 1030, 1114, 2019
Bsu36I	CCTNAGG	1 cut(s)	407
BsuI	GTATCC	1 cut(s)	109
BsuRI	GGCC	6 cut(s)	146, 353, 412, 634, 737, 1598
BtgI	CCRYGG	1 cut(s)	241
BtsCI	GGATG	1 cut(s)	464
BtsIMutI	CAGTG	3 cut(s)	761, 977, 1196
BveI	ACCTGC	1 cut(s)	484
Cac8I	GCNNGC	3 cut(s)	307, 621, 1608
CciI	TCATGA	1 cut(s)	1708
CfoI	GCGC	3 cut(s)	554, 593, 1281
Cfr13I	GGNCC	6 cut(s)	144, 145, 251, 534, 736, 1597
CseI	GACGC	2 cut(s)	182, 431
Csp6I	GTAC	2 cut(s)	754, 970
CviAII	CATG	9 cut(s)	89, 103, 170, 242, 875, 1091, 1522, 1607, 1709
CviQI	GTAC	2 cut(s)	754, 970
Eam1104I	CTCTTC	1 cut(s)	606
EarI	CTCTTC	1 cut(s)	606
Eco130I	CCWWGG	5 cut(s)	241, 530, 658, 696, 912
Eco24I	GRGCYC	1 cut(s)	148
Eco32I	GATATC	2 cut(s)	1374, 1784
Eco47I	GGWCC	2 cut(s)	251, 534
Eco57I	CTGAAG	2 cut(s)	785, 1001
Eco81I	CCTNAGG	1 cut(s)	407
Eco88I	CYCGRG	1 cut(s)	707
EcoNI	CCTNNNNNAGG	1 cut(s)	1697
EcoO109I	RGGNCCY	1 cut(s)	534
EcoRV	GATATC	2 cut(s)	1374, 1784
EcoT14I	CCWWGG	5 cut(s)	241, 530, 658, 696, 912
EcoT22I	ATGCAT	1 cut(s)	1608
EcoT38I	GRGCYC	1 cut(s)	148
ErhI	CCWWGG	5 cut(s)	241, 530, 658, 696, 912
FaeI	CATG	9 cut(s)	92, 106, 173, 245, 878, 1094, 1525, 1610, 1712
FaqI	GGGAC	2 cut(s)	41, 520
FatI	CATG	9 cut(s)	88, 102, 169, 241, 874, 1090, 1521, 1606, 1708
FauNDI	CATATG	1 cut(s)	1166
FbaI	TGATCA	3 cut(s)	3, 1306, 1948
Fnu4HI	GCNGC	6 cut(s)	228, 594, 704, 1160, 1353, 1944
FokI	GGATG	1 cut(s)	451
FriOI	GRGCYC	1 cut(s)	148
Fsp4HI	GCNGC	6 cut(s)	228, 594, 704, 1160, 1353, 1944
FspBI	CTAG	7 cut(s)	306, 383, 659, 665, 1644, 1803, 1842
GlaI	GCGC	3 cut(s)	553, 592, 1280
GluI	GCNGC	6 cut(s)	228, 594, 704, 1160, 1353, 1944
GsaI	CCCAGC	3 cut(s)	214, 291, 405
GsuI	CTGGAG	2 cut(s)	1850, 1959
HaeIII	GGCC	6 cut(s)	146, 353, 412, 634, 737, 1598
HapII	CCGG	3 cut(s)	391, 716, 932
HgaI	GACGC	2 cut(s)	182, 431
HhaI	GCGC	3 cut(s)	554, 593, 1281
Hin1II	CATG	9 cut(s)	92, 106, 173, 245, 878, 1094, 1525, 1610, 1712
Hin6I	GCGC	3 cut(s)	552, 591, 1279
HinP1I	GCGC	3 cut(s)	552, 591, 1279
HindIII	AAGCTT	1 cut(s)	83
HinfI	GANTC	9 cut(s)	25, 106, 712, 835, 928, 1051, 1259, 1406, 1838
HpaII	CCGG	3 cut(s)	391, 716, 932
HphI	GGTGA	1 cut(s)	1437
Hpy99I	CGWCG	2 cut(s)	421, 1971
HpyAV	CCTTC	7 cut(s)	512, 624, 872, 1088, 1342, 1489, 1528
HpyCH4IV	ACGT	1 cut(s)	416
HpyF10VI	GCNNNNNNNGC	6 cut(s)	82, 233, 302, 1205, 1889, 1919
HpySE526I	ACGT	1 cut(s)	416
Hsp92II	CATG	9 cut(s)	92, 106, 173, 245, 878, 1094, 1525, 1610, 1712
HspAI	GCGC	3 cut(s)	552, 591, 1279
Kpn2I	TCCGGA	3 cut(s)	390, 715, 931
Ksp22I	TGATCA	3 cut(s)	3, 1306, 1948
LmnI	GCTCC	6 cut(s)	25, 92, 700, 916, 1940, 2031
Lsp1109I	GCAGC	5 cut(s)	214, 690, 1171, 1339, 1955
MaeI	CTAG	7 cut(s)	306, 383, 659, 665, 1644, 1803, 1842
MaeII	ACGT	1 cut(s)	416
MaeIII	GTNAC	3 cut(s)	356, 453, 1236
MboII	GAAGA	8 cut(s)	166, 229, 623, 683, 808, 899, 1489, 1697
MfeI	CAATTG	1 cut(s)	2013
MflI	RGATCY	5 cut(s)	526, 814, 1030, 1114, 2019
MhlI	GDGCHC	3 cut(s)	148, 862, 1078
MlyI	GAGTC	1 cut(s)	19
MmeI	TCCRAC	6 cut(s)	47, 131, 229, 307, 399, 1749
Mph1103I	ATGCAT	1 cut(s)	1608
MroI	TCCGGA	3 cut(s)	390, 715, 931
MroXI	GAANNNNTTC	1 cut(s)	1754
MseI	TTAA	6 cut(s)	65, 1142, 1299, 1340, 1484, 1586
MspA1I	CMGCKG	1 cut(s)	1946
MspI	CCGG	3 cut(s)	391, 716, 932
MunI	CAATTG	1 cut(s)	2013
Mva1269I	GAATGC	2 cut(s)	386, 1201
MvnI	CGCG	1 cut(s)	593
MwoI	GCNNNNNNNGC	6 cut(s)	82, 233, 302, 1205, 1889, 1919
NcoI	CCATGG	1 cut(s)	241
NdeI	CATATG	1 cut(s)	1166
NheI	GCTAGC	1 cut(s)	305
NlaIII	CATG	9 cut(s)	92, 106, 173, 245, 878, 1094, 1525, 1610, 1712
NlaIV	GGNNCC	3 cut(s)	146, 253, 536
NmeAIII	GCCGAG	1 cut(s)	7
NmuCI	GTSAC	1 cut(s)	356
NsiI	ATGCAT	1 cut(s)	1608
NspI	RCATGY	1 cut(s)	1610
PaeI	GCATGC	1 cut(s)	1610
PaeR7I	CTCGAG	1 cut(s)	707
PagI	TCATGA	1 cut(s)	1708
PctI	GAATGC	2 cut(s)	386, 1201
PdmI	GAANNNNTTC	1 cut(s)	1754
PfeI	GAWTC	8 cut(s)	106, 712, 835, 928, 1051, 1259, 1406, 1838
PkrI	GCNGC	6 cut(s)	229, 595, 705, 1161, 1354, 1945
PleI	GAGTC	1 cut(s)	19
PpsI	GAGTC	1 cut(s)	19
PpuMI	RGGWCCY	1 cut(s)	534
PshBI	ATTAAT	1 cut(s)	1484
Psp5II	RGGWCCY	1 cut(s)	534
PspFI	CCCAGC	3 cut(s)	210, 287, 401
PspN4I	GGNNCC	3 cut(s)	146, 253, 536
PspOMI	GGGCCC	1 cut(s)	144
PspPI	GGNCC	6 cut(s)	144, 145, 251, 534, 736, 1597
PspPPI	RGGWCCY	1 cut(s)	534
PstI	CTGCAG	1 cut(s)	1461
PsuI	RGATCY	5 cut(s)	526, 814, 1030, 1114, 2019
PvuII	CAGCTG	1 cut(s)	1946
RsaI	GTAC	2 cut(s)	755, 971
RsaNI	GTAC	2 cut(s)	754, 970
SaqAI	TTAA	6 cut(s)	65, 1142, 1299, 1340, 1484, 1586
SatI	GCNGC	6 cut(s)	228, 594, 704, 1160, 1353, 1944
Sau96I	GGNCC	6 cut(s)	144, 145, 251, 534, 736, 1597
SchI	GAGTC	1 cut(s)	19
SduI	GDGCHC	3 cut(s)	148, 862, 1078
SfcI	CTRYAG	2 cut(s)	1457, 1654
Sfr274I	CTCGAG	1 cut(s)	707
SinI	GGWCC	2 cut(s)	251, 534
SlaI	CTCGAG	1 cut(s)	707
SmlI	CTYRAG	4 cut(s)	707, 923, 1151, 1787
SmoI	CTYRAG	4 cut(s)	707, 923, 1151, 1787
SpeI	ACTAGT	1 cut(s)	1643
SphI	GCATGC	1 cut(s)	1610
SsiI	CCGC	1 cut(s)	593
SspMI	CTAG	7 cut(s)	306, 383, 659, 665, 1644, 1803, 1842
StyI	CCWWGG	5 cut(s)	241, 530, 658, 696, 912
TaiI	ACGT	1 cut(s)	419
TaqI	TCGA	6 cut(s)	321, 328, 436, 628, 708, 1969
TatI	WGTACW	2 cut(s)	753, 969
TauI	GCSGC	1 cut(s)	596
TfiI	GAWTC	8 cut(s)	106, 712, 835, 928, 1051, 1259, 1406, 1838
Tru1I	TTAA	6 cut(s)	65, 1142, 1299, 1340, 1484, 1586
Tru9I	TTAA	6 cut(s)	65, 1142, 1299, 1340, 1484, 1586
TscAI	CASTG	3 cut(s)	768, 984, 1196
TseFI	GTSAC	1 cut(s)	356
TseI	GCWGC	5 cut(s)	227, 703, 1159, 1352, 1943
Tsp45I	GTSAC	1 cut(s)	356
TspDTI	ATGAA	7 cut(s)	77, 1430, 1524, 1697, 1701, 1728, 1736
TspRI	CASTG	3 cut(s)	768, 984, 1196
VpaK11BI	GGWCC	2 cut(s)	251, 534
VspI	ATTAAT	1 cut(s)	1484
XagI	CCTNNNNNAGG	1 cut(s)	1697
XapI	RAATTY	5 cut(s)	67, 138, 157, 800, 1016
XceI	RCATGY	1 cut(s)	1610
XcmI	CCANNNNNNNNNTGG	1 cut(s)	545
XhoI	CTCGAG	1 cut(s)	707
XmaJI	CCTAGG	1 cut(s)	658
XmnI	GAANNNNTTC	1 cut(s)	1754
XspI	CTAG	7 cut(s)	306, 383, 659, 665, 1644, 1803, 1842
Zsp2I	ATGCAT	1 cut(s)	1608

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.