Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000001

Orthogroup ID

OG0002625

Physical Location & Seq

Genomic Coordinates Forward (+)

21312606 .. 21316764

Gene Structure 4159 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug01G0123600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1791 bp

ATGGTTGCAGACTCGTGGTTTCGCAGTCTCTGGAGGACAAAAAAGAAGCACGAGGATGGTCCTGAGAAAGCAGTGATTAGAGTTTTGGCCTTTGAAGTAGCAAGCTTGATGTCTAAGCTAGTCCAGTTATGGCAATTTCTGAGTGATAAACAAGTGGCTAGGCTCAGAGAGGAAATTTCAAATTCAGTGGGTATAAGAAAGCTTGTGTCAGATGATGATGATTATATTGGAGGTTTAATATGCATCGAGTTGTTTGAGAATATGGTCCGTGTGGCAAAATCTGTGGACAGGCTTGGGAGGAATTGTACTGATCCTAGTTTGAAGGGTTTTGAGACTGCTATTAGTGATTTGATCAATTACGGTGTTGACACTTATGGATGGCAATTATCATGGAAAAAGATGGAGAGGAAGGCCAAGAAGATGGAGAGGTTCATTTCAATAAATGCAAATTTGTATGAAGAGATGGAAGTTCTTTCAGAGCTTGAACAGACGTTGAGTAGAATGAAAGGCAGTGGTGACTTAGATGGTGTTAATTTGCCGGAGTTTCAAAAGAAGGTAGTGTGGAAGCGGCAGGAGGTGAAGAATTTGAAAGAGGTCTCTCTGTGGAACAGAACTTATGACTATACAGTCCTCCTTTTAGCAAGATCTCTCTTCACAATATTCAGTAGGATCAAGCATGTCTTTGGAGTTCAACAGATGGCAGATGGTGAATCCAAAGATTCTGATCACATTAGTCGTAGTCATTCAGTGTCTGCAATAATACAGCCTTCAGTCCAACCATCTGAGAACGGTCTTCCAAGATTTGCCTCAGGTCCCCTTGGGAGGTTTGCTGCTACATCAGGGCCAATTTCGAAAACACACAAAACCAACAATTTCTTTTCAGGCCCTCTTGGTGGCTCCAGCACAAAATCAGGCCCTATTTCAGCAAAAAAGAAAGATGTCAACTTCTTTTCAGGTCCTCTTGGGAAGTCAACAAAATCAGGCCCAATTGCTGCAACTAATAGAACCATCAGGAAGTTCTGGAAGTCTCGTGATCACTCAGTCACTAATCATGAGAAGAAACCACCTACAAAGCCCAATAGGTTGACTCAAGTTGGACCTTTTAAAGGATGCATGATAAGCAATTCACCTGTCACCAATTGCTACTTGAATTCAAATGGTGTTCGTTCAGCAATTCTCAATGTAGCCAGAGATGCCAATGGAGACATTTTGGCTTCTGGCAGCAAACTTCATCCTAGTCCGTCAATCTTCAGTTCCAAGTACAAATTGTTGGATGCTCCACCTGAAACCCTTGGTGCTGCTGCCTTAGCACTGCACTATGCAAATGTTGTTATTGTAATTGAGAAGTTAGTTGCATCTCCTCACTTGATTGGTCTTGATGCGAGAGATGACCTGTACAATATGTTGCCTGCAAGTGTGAGAGCTGCACTAAGGGCAAGGCTAAAGCCATACAGTAAGAGCTTAACTTCATCAGTTTACGATACAGTTCTTGCAGGAGAGTGGAATGAGGCAATGGCGGGGATATTAGAATGGTTGGCACCACTTGCTCATAACATGATAAGATGGCAATCCGAGAGGAGCTTTGAACAGCAAACCTTGGTTTCCAGGACACATGTTCTTCTGGTTCAAACCCTCTACTTTGCAAATCAACAGAAAACAGAAGCAACAATTACAGAGCTTCTTGTTGGTTTGAATTACATCTGGAGGTTTGGCAGAGAAGTCAATGCAAAGGCTCTGTTAGATTGTGATAGCAATAGAACGTATGATGATTTTTTGGATATGGATGGGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000070 GO:0000228 GO:0000278 GO:0000280 GO:0000775 GO:0000776 GO:0000777 GO:0000778 GO:0000779 GO:0000780 GO:0000793 GO:0000794 GO:0000819 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0005737 GO:0005773 GO:0005774 GO:0005815 GO:0005816 GO:0005856 GO:0005886 GO:0006996 GO:0007049 GO:0007059 GO:0007080 GO:0007127 GO:0008150 GO:0008608 GO:0009987 GO:0015630 GO:0016020 GO:0016043 GO:0022402 GO:0022414 GO:0031090 GO:0031262 GO:0031617 GO:0031974 GO:0031981 GO:0032991 GO:0035974 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044430 GO:0044437 GO:0044444 GO:0044446 GO:0044454 GO:0044464 GO:0045132 GO:0045143 GO:0048285 GO:0050000 GO:0051179 GO:0051234 GO:0051276 GO:0051303 GO:0051310 GO:0051315 GO:0051316 GO:0051321 GO:0051455 GO:0051640 GO:0051641 GO:0051649 GO:0051656 GO:0061982 GO:0070013 GO:0071840 GO:0071944 GO:0098588 GO:0098687 GO:0098805 GO:0098813 GO:0140013 GO:0140014 GO:1903046 GO:1903047

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Nuf2

Protein Analysis

596

Amino Acids

66.64

Weight (kDa)

9.38

Isoelectric Point (pI)

37.24

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DUF3475	PF11961	28 - 83	2.5e-25	Domain of unknown function (DUF3475)
DUF668	PF05003	430 - 521	2.3e-35	Protein of unknown function (DUF668)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002625)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G61000
fragaria_vesca	FvH4_6g25020 FvH4_6g25020 FvH4_6g25020 FvH4_6g25020 FvH4_6g25020 FvH4_6g25020 FvH4_7g06682 FvH4_7g06682 FvH4_7g06682 FvH4_7g06682 FvH4_7g06682
malus_domestica	MD08G1232500.v1.1 MD08G1233000.v1.1 MD15G1425300.v1.1
prunus_persica	Prupe.1G570900_v2.0.a1 Prupe.1G570900_v2.0.a1
pyrus_communis	pycom08g20190 pycom15g37700
rosa_chinensis	RchiOBHm_Chr1g0336301 RchiOBHm_Chr7g0222021
rosa_laevigata	RLG00000002102 RLG00000029374
rosa_multiflora	Rmu_co8043290.1_g000001 Rmu_sc0001453.1_g000009 Rmu_sc0004325.1_g000003
rosa_roxburghii	Rroxscaffold_3G00237490 Rroxscaffold_4G00315800
rosa_rugosa	Rorug01G0123600 Rorug07G0205100
rosa_samantha	Rh1AG144300 Rh1BG113700 Rh1CG135800 Rh1DG150800 Rh7AG345600 Rh7BG336200 Rh7CG363300 Rh7DG343900
rosa_wichuraiana	Rw0G015220 Rw7G029310

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	626
AccB1I	GGYRCC	1 cut(s)	1537
AciI	CCGC	2 cut(s)	568, 1517
AclWI	GGATC	2 cut(s)	305, 677
AcsI	RAATTY	5 cut(s)	174, 181, 448, 583, 1150
AcuI	CTGAAG	2 cut(s)	753, 1234
AfaI	GTAC	3 cut(s)	307, 1262, 1397
AfiI	CCNNNNNNNGG	3 cut(s)	822, 893, 1106
AflIII	ACRYGT	1 cut(s)	1612
AjnI	CCWGG	1 cut(s)	1604
AluBI	AGCT	8 cut(s)	105, 118, 202, 481, 1424, 1461, 1581, 1678
AluI	AGCT	8 cut(s)	105, 118, 202, 481, 1424, 1461, 1581, 1678
Alw26I	GTCTC	5 cut(s)	32, 326, 601, 1032, 1197
AlwI	GGATC	2 cut(s)	305, 677
AlwNI	CAGNNNCTG	2 cut(s)	30, 752
AoxI	GGCC	6 cut(s)	87, 411, 842, 883, 913, 982
ApeKI	GCWGC	6 cut(s)	830, 992, 1221, 1298, 1301, 1424
ApoI	RAATTY	5 cut(s)	174, 181, 448, 583, 1150
AspS9I	GGNCC	9 cut(s)	59, 265, 812, 842, 884, 914, 956, 983, 1097
AsuHPI	GGTGA	5 cut(s)	527, 589, 719, 1119, 1126
AsuII	TTCGAA	1 cut(s)	851
AvaII	GGWCC	5 cut(s)	59, 265, 812, 956, 1097
AxyI	CCTNAGG	1 cut(s)	808
BanI	GGYRCC	1 cut(s)	1537
BauI	CACGAG	3 cut(s)	13, 50, 1029
BbsI	GAAGAC	1 cut(s)	785
BbvI	GCAGC	6 cut(s)	817, 979, 1233, 1285, 1288, 1411
BciT130I	CCWGG	1 cut(s)	1606
BclI	TGATCA	3 cut(s)	351, 724, 1033
BcoDI	GTCTC	5 cut(s)	32, 326, 601, 1032, 1197
BfaI	CTAG	4 cut(s)	119, 159, 315, 1236
BglII	AGATCT	1 cut(s)	644
BisI	GCNGC	7 cut(s)	569, 831, 993, 1222, 1299, 1302, 1425
BlsI	GCNGC	7 cut(s)	570, 832, 994, 1223, 1300, 1303, 1426
Bme1390I	CCNGG	1 cut(s)	1606
Bme18I	GGWCC	5 cut(s)	59, 265, 812, 956, 1097
BmgT120I	GGNCC	9 cut(s)	59, 265, 812, 842, 884, 914, 956, 983, 1097
BmiI	GGNNCC	3 cut(s)	814, 898, 1539
BmrFI	CCNGG	1 cut(s)	1606
BmsI	GCATC	6 cut(s)	252, 1100, 1183, 1264, 1364, 1369
BpiI	GAAGAC	1 cut(s)	785
BpmI	CTGGAG	3 cut(s)	52, 883, 1723
Bpu10I	CCTNAGC	1 cut(s)	1306
Bpu14I	TTCGAA	1 cut(s)	851
BpuEI	CTTGAG	1 cut(s)	1074
BsaBI	GATNNNNATC	2 cut(s)	723, 1567
BsaI	GGTCTC	1 cut(s)	601
BsaJI	CCNNGG	3 cut(s)	817, 1291, 1596
BsaXI	ACNNNNNCTCC	2 cut(s)	289, 319
Bsc4I	CCNNNNNNNGG	3 cut(s)	822, 893, 1106
Bse1I	ACTGG	1 cut(s)	124
Bse21I	CCTNAGG	1 cut(s)	808
Bse3DI	GCAATG	1 cut(s)	1518
Bse8I	GATNNNNATC	2 cut(s)	723, 1567
BseBI	CCWGG	1 cut(s)	1606
BseDI	CCNNGG	3 cut(s)	817, 1291, 1596
BseGI	GGATG	6 cut(s)	61, 383, 1115, 1231, 1279, 1789
BseJI	GATNNNNATC	2 cut(s)	723, 1567
BseLI	CCNNNNNNNGG	3 cut(s)	822, 893, 1106
BseMI	GCAATG	1 cut(s)	1518
BseMII	CTCAG	6 cut(s)	54, 131, 178, 774, 822, 1053
BseNI	ACTGG	1 cut(s)	124
BseRI	GAGGAG	2 cut(s)	1350, 1591
BseXI	GCAGC	6 cut(s)	817, 979, 1233, 1285, 1288, 1411
BsgI	GTGCAG	2 cut(s)	1298, 1410
BshFI	GGCC	6 cut(s)	89, 413, 844, 885, 915, 984
BshNI	GGYRCC	1 cut(s)	1537
BsiSI	CCGG	1 cut(s)	539
BslFI	GGGAC	1 cut(s)	798
BslI	CCNNNNNNNGG	3 cut(s)	822, 893, 1106
BsmAI	GTCTC	5 cut(s)	32, 326, 601, 1032, 1197
BsmFI	GGGAC	1 cut(s)	798
BsnI	GGCC	6 cut(s)	89, 413, 844, 885, 915, 984
Bso31I	GGTCTC	1 cut(s)	601
Bsp119I	TTCGAA	1 cut(s)	851
Bsp1407I	TGTACA	1 cut(s)	1395
Bsp143I	GATC	6 cut(s)	310, 351, 644, 669, 724, 1033
BspACI	CCGC	2 cut(s)	568, 1517
BspANI	GGCC	6 cut(s)	89, 413, 844, 885, 915, 984
BspCNI	CTCAG	6 cut(s)	55, 132, 177, 775, 821, 1052
BspHI	TCATGA	1 cut(s)	1051
BspLI	GGNNCC	3 cut(s)	814, 898, 1539
BspPI	GGATC	2 cut(s)	305, 677
BspT104I	TTCGAA	1 cut(s)	851
BspT107I	GGYRCC	1 cut(s)	1537
BspTNI	GGTCTC	1 cut(s)	601
BsrDI	GCAATG	1 cut(s)	1518
BsrGI	TGTACA	1 cut(s)	1395
BsrI	ACTGG	1 cut(s)	124
BssECI	CCNNGG	3 cut(s)	817, 1291, 1596
BssMI	GATC	6 cut(s)	310, 351, 644, 669, 724, 1033
BssSI	CACGAG	3 cut(s)	13, 50, 1029
BssT1I	CCWWGG	3 cut(s)	817, 1291, 1596
Bst2BI	CACGAG	3 cut(s)	13, 50, 1029
Bst2UI	CCWGG	1 cut(s)	1606
Bst4CI	ACNGT	5 cut(s)	362, 628, 791, 1454, 1486
Bst6I	CTCTTC	2 cut(s)	453, 656
BstAPI	GCANNNNNTGC	1 cut(s)	1544
BstAUI	TGTACA	1 cut(s)	1395
BstBI	TTCGAA	1 cut(s)	851
BstC8I	GCNNGC	2 cut(s)	103, 1410
BstENI	CCTNNNNNAGG	1 cut(s)	1104
BstF5I	GGATG	6 cut(s)	61, 383, 1115, 1231, 1279, 1789
BstKTI	GATC	6 cut(s)	313, 354, 647, 672, 727, 1036
BstMAI	GTCTC	5 cut(s)	32, 326, 601, 1032, 1197
BstMBI	GATC	6 cut(s)	310, 351, 644, 669, 724, 1033
BstMWI	GCNNNNNNNGC	5 cut(s)	1119, 1193, 1307, 1433, 1544
BstNI	CCWGG	1 cut(s)	1606
BstNSI	RCATGY	2 cut(s)	680, 1616
BstSCI	CCNGG	1 cut(s)	1604
BstV1I	GCAGC	6 cut(s)	817, 979, 1233, 1285, 1288, 1411
BstV2I	GAAGAC	1 cut(s)	785
BstX2I	RGATCY	1 cut(s)	644
BstXI	CCANNNNNNTGG	1 cut(s)	421
BstYI	RGATCY	1 cut(s)	644
Bsu36I	CCTNAGG	1 cut(s)	808
BsuRI	GGCC	6 cut(s)	89, 413, 844, 885, 915, 984
BtsCI	GGATG	6 cut(s)	61, 383, 1115, 1231, 1279, 1789
BtsI	GCAGTG	3 cut(s)	78, 517, 1310
BtsIMutI	CAGTG	5 cut(s)	78, 192, 517, 753, 1310
Cac8I	GCNNGC	2 cut(s)	103, 1410
CaiI	CAGNNNCTG	2 cut(s)	30, 752
CciI	TCATGA	1 cut(s)	1051
Cfr13I	GGNCC	9 cut(s)	59, 265, 812, 842, 884, 914, 956, 983, 1097
Csp6I	GTAC	3 cut(s)	306, 1261, 1396
CspCI	CAANNNNNGTGG	4 cut(s)	168, 203, 264, 299
CviAII	CATG	6 cut(s)	390, 677, 1052, 1114, 1555, 1613
CviQI	GTAC	3 cut(s)	306, 1261, 1396
DpnI	GATC	6 cut(s)	312, 353, 646, 671, 726, 1035
DpnII	GATC	6 cut(s)	310, 351, 644, 669, 724, 1033
DraI	TTTAAA	1 cut(s)	1105
DrdI	GACNNNNNNGTC	1 cut(s)	626
DseDI	GACNNNNNNGTC	1 cut(s)	626
Eam1104I	CTCTTC	2 cut(s)	453, 656
EarI	CTCTTC	2 cut(s)	453, 656
Eco130I	CCWWGG	3 cut(s)	817, 1291, 1596
Eco31I	GGTCTC	1 cut(s)	601
Eco47I	GGWCC	5 cut(s)	59, 265, 812, 956, 1097
Eco57I	CTGAAG	2 cut(s)	753, 1234
Eco81I	CCTNAGG	1 cut(s)	808
EcoNI	CCTNNNNNAGG	1 cut(s)	1104
EcoO109I	RGGNCCY	4 cut(s)	812, 884, 914, 956
EcoRI	GAATTC	1 cut(s)	1150
EcoRII	CCWGG	1 cut(s)	1604
EcoT14I	CCWWGG	3 cut(s)	817, 1291, 1596
EcoT22I	ATGCAT	2 cut(s)	245, 1115
ErhI	CCWWGG	3 cut(s)	817, 1291, 1596
FaeI	CATG	6 cut(s)	393, 680, 1055, 1117, 1558, 1616
FalI	AAGNNNNNCTT	2 cut(s)	665, 697
FaqI	GGGAC	1 cut(s)	798
FatI	CATG	6 cut(s)	389, 676, 1051, 1113, 1554, 1612
FauI	CCCGC	1 cut(s)	1510
FbaI	TGATCA	3 cut(s)	351, 724, 1033
Fnu4HI	GCNGC	7 cut(s)	569, 831, 993, 1222, 1299, 1302, 1425
FokI	GGATG	5 cut(s)	68, 390, 1122, 1218, 1286
Fsp4HI	GCNGC	7 cut(s)	569, 831, 993, 1222, 1299, 1302, 1425
FspBI	CTAG	4 cut(s)	119, 159, 315, 1236
GluI	GCNGC	7 cut(s)	569, 831, 993, 1222, 1299, 1302, 1425
GsuI	CTGGAG	3 cut(s)	52, 883, 1723
HaeIII	GGCC	6 cut(s)	89, 413, 844, 885, 915, 984
HapII	CCGG	1 cut(s)	539
Hin1II	CATG	6 cut(s)	393, 680, 1055, 1117, 1558, 1616
HincII	GTYRAC	4 cut(s)	367, 943, 972, 1086
HindII	GTYRAC	4 cut(s)	367, 943, 972, 1086
HindIII	AAGCTT	2 cut(s)	103, 200
HinfI	GANTC	4 cut(s)	11, 710, 719, 1087
HpaII	CCGG	1 cut(s)	539
HphI	GGTGA	5 cut(s)	527, 589, 719, 1119, 1126
Hpy166II	GTNNAC	6 cut(s)	286, 367, 943, 972, 1086, 1477
Hpy188I	TCNGA	7 cut(s)	141, 167, 211, 478, 724, 784, 1573
Hpy188III	TCNNGA	8 cut(s)	31, 62, 1012, 1021, 1031, 1052, 1376, 1702
Hpy8I	GTNNAC	6 cut(s)	286, 367, 943, 972, 1086, 1477
HpyAV	CCTTC	4 cut(s)	316, 403, 547, 777
HpyCH4III	ACNGT	5 cut(s)	362, 628, 791, 1454, 1486
HpyCH4IV	ACGT	2 cut(s)	491, 1760
HpyF10VI	GCNNNNNNNGC	5 cut(s)	1119, 1193, 1307, 1433, 1544
HpySE526I	ACGT	2 cut(s)	491, 1760
Hsp92II	CATG	6 cut(s)	393, 680, 1055, 1117, 1558, 1616
Ksp22I	TGATCA	3 cut(s)	351, 724, 1033
Kzo9I	GATC	6 cut(s)	310, 351, 644, 669, 724, 1033
LmnI	GCTCC	3 cut(s)	902, 1282, 1578
Lsp1109I	GCAGC	6 cut(s)	817, 979, 1233, 1285, 1288, 1411
LweI	GCATC	6 cut(s)	252, 1100, 1183, 1264, 1364, 1369
MaeI	CTAG	4 cut(s)	119, 159, 315, 1236
MaeII	ACGT	2 cut(s)	491, 1760
MaeIII	GTNAC	3 cut(s)	515, 1042, 1132
MalI	GATC	6 cut(s)	312, 353, 646, 671, 726, 1035
MboI	GATC	6 cut(s)	310, 351, 644, 669, 724, 1033
MboII	GAAGA	8 cut(s)	430, 470, 592, 643, 785, 1069, 1240, 1610
MfeI	CAATTG	2 cut(s)	987, 1138
MflI	RGATCY	1 cut(s)	644
MlyI	GAGTC	2 cut(s)	5, 1081
MmeI	TCCRAC	3 cut(s)	799, 1075, 1251
Mph1103I	ATGCAT	2 cut(s)	245, 1115
MseI	TTAA	4 cut(s)	236, 531, 1104, 1463
MslI	CAYNNNNRTG	1 cut(s)	54
MspI	CCGG	1 cut(s)	539
MspR9I	CCNGG	1 cut(s)	1606
MunI	CAATTG	2 cut(s)	987, 1138
MvaI	CCWGG	1 cut(s)	1606
MwoI	GCNNNNNNNGC	5 cut(s)	1119, 1193, 1307, 1433, 1544
NdeII	GATC	6 cut(s)	310, 351, 644, 669, 724, 1033
NlaIII	CATG	6 cut(s)	393, 680, 1055, 1117, 1558, 1616
NlaIV	GGNNCC	3 cut(s)	814, 898, 1539
NmuCI	GTSAC	3 cut(s)	515, 1042, 1132
NsiI	ATGCAT	2 cut(s)	245, 1115
NspI	RCATGY	2 cut(s)	680, 1616
NspV	TTCGAA	1 cut(s)	851
PagI	TCATGA	1 cut(s)	1051
PciI	ACATGT	1 cut(s)	1612
PfeI	GAWTC	2 cut(s)	710, 719
PfoI	TCCNGGA	1 cut(s)	1604
PkrI	GCNGC	7 cut(s)	570, 832, 994, 1223, 1300, 1303, 1426
PleI	GAGTC	2 cut(s)	5, 1081
PpsI	GAGTC	2 cut(s)	5, 1081
PpuMI	RGGWCCY	2 cut(s)	812, 956
PscI	ACATGT	1 cut(s)	1612
Psp5II	RGGWCCY	2 cut(s)	812, 956
Psp6I	CCWGG	1 cut(s)	1604
PspGI	CCWGG	1 cut(s)	1604
PspN4I	GGNNCC	3 cut(s)	814, 898, 1539
PspPI	GGNCC	9 cut(s)	59, 265, 812, 842, 884, 914, 956, 983, 1097
PspPPI	RGGWCCY	2 cut(s)	812, 956
PstNI	CAGNNNCTG	2 cut(s)	30, 752
PsuI	RGATCY	1 cut(s)	644
RsaI	GTAC	3 cut(s)	307, 1262, 1397
RsaNI	GTAC	3 cut(s)	306, 1261, 1396
RseI	CAYNNNNRTG	1 cut(s)	54
SaqAI	TTAA	4 cut(s)	236, 531, 1104, 1463
SatI	GCNGC	7 cut(s)	569, 831, 993, 1222, 1299, 1302, 1425
Sau3AI	GATC	6 cut(s)	310, 351, 644, 669, 724, 1033
Sau96I	GGNCC	9 cut(s)	59, 265, 812, 842, 884, 914, 956, 983, 1097
SchI	GAGTC	2 cut(s)	5, 1081
ScrFI	CCNGG	1 cut(s)	1606
SfaNI	GCATC	6 cut(s)	252, 1100, 1183, 1264, 1364, 1369
SfuI	TTCGAA	1 cut(s)	851
SinI	GGWCC	5 cut(s)	59, 265, 812, 956, 1097
SmiMI	CAYNNNNRTG	1 cut(s)	54
SmlI	CTYRAG	1 cut(s)	1089
SmoI	CTYRAG	1 cut(s)	1089
SsiI	CCGC	2 cut(s)	568, 1517
SspI	AATATT	1 cut(s)	660
SspMI	CTAG	4 cut(s)	119, 159, 315, 1236
StyD4I	CCNGG	1 cut(s)	1604
StyI	CCWWGG	3 cut(s)	817, 1291, 1596
TaaI	ACNGT	5 cut(s)	362, 628, 791, 1454, 1486
TaiI	ACGT	2 cut(s)	494, 1763
TaqI	TCGA	2 cut(s)	246, 851
TatI	WGTACW	3 cut(s)	305, 1260, 1395
TauI	GCSGC	1 cut(s)	571
TfiI	GAWTC	2 cut(s)	710, 719
Tru1I	TTAA	4 cut(s)	236, 531, 1104, 1463
Tru9I	TTAA	4 cut(s)	236, 531, 1104, 1463
TscAI	CASTG	5 cut(s)	78, 192, 517, 753, 1317
TseFI	GTSAC	3 cut(s)	515, 1042, 1132
TseI	GCWGC	6 cut(s)	830, 992, 1221, 1298, 1301, 1424
Tsp45I	GTSAC	3 cut(s)	515, 1042, 1132
TspDTI	ATGAA	5 cut(s)	421, 471, 518, 1220, 1458
TspGWI	ACGGA	2 cut(s)	257, 1230
TspRI	CASTG	5 cut(s)	78, 192, 517, 753, 1317
VpaK11BI	GGWCC	5 cut(s)	59, 265, 812, 956, 1097
XagI	CCTNNNNNAGG	1 cut(s)	1104
XapI	RAATTY	5 cut(s)	174, 181, 448, 583, 1150
XceI	RCATGY	2 cut(s)	680, 1616
XspI	CTAG	4 cut(s)	119, 159, 315, 1236
Zsp2I	ATGCAT	2 cut(s)	245, 1115

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.