Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000007

Orthogroup ID

OG0002625

Physical Location & Seq

Genomic Coordinates Forward (+)

18018776 .. 18020350

Gene Structure 1575 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug07G0205100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1482 bp

ATGGCTCAGATTTGTACCGGTGCTTTGGCTGCTCCGGCTGACTCTGCTAGGGTGTCGCTAGGTGCGGCGGGGACGGAGGCGTTGCAGGACAACCGTTGGTATATGGTTGGACGCTTGCTTGGTCCAAAGTCTCGTTTCCCCGGTTTCAAGGGAACTATTTCTTCGATCTGGCGCATCAAATCGGGACTCTCTGTCCATGATGCTGGAGATCGGTTTATGTTTCAATTCAACCATGAAGCGGATCGTAACAGGGCATTGCACGGAGGGCCGTGGTTCTACAGGAATACGATGTTGTTGCTAGGTGCATATGATGGGGTTGGCTTGGTGGAGACTGTTCCCTTGTGGGAGATGGAGATCTGGGTTGCAGTAAAGGGTTTGCCGGTGGCACTTCGCAACAATAACGCCCTAAATCTCATTGGCTATGCTGTTGGCCCAGTTATCAAATTTGATCAGTCGACCCTCCGTCGGAGGGAGGAGGAACAGCGGATCCGCCTGGTGTTGGACATCCGTCGGAGGGTACGAACATGGATGCTTTTTGAGTTCTCTCCCTTGGTGCAGCCTGAGATCACCCTCATTTATGAGAAAGTTAAGGGTTTCTGCAGGGACTGTGGATATTTTGAGCATGATGCGATGGGATGCGATGGCTTTTTAGTGAAAGAGAAAGCAGAACTGCAGAATGGGCCACCGGAGGCGGCGATGGCTGGGCTGTCTCTAGCAGTGGACGACATGCATCAGGAACCGGTTTTAGCTCCAATGGTGGAGCAGTTGCTAAGTCCTGATGAAACTGGAAAGGGCATGGAGATCGTGTTGCAACAGGAGGAAGCGGGGATTGGTGGTGTGCTCCAAGATTCCATGTTGCATGGAATTGTGGGAGGCCATGCGTCACATGGAAGTGAAGGGGTGCATGGTTCCATGATTGCTGGAGTTGAAATCTGTCCACCAATTGGAATGGTTGAGAATGGTGGGGTCGGATGGTTCAAGAATTGGAAAACCTTAGTGCTTGAGGTTTCTAAAGCCATGGTGCTCCCTGCGCAGACTTTGACTAAAGCAAAGAAAGGTTTGTTGAAGTCGGATTTGGACCTGGGATCGTCAAGTTTGGCAGTAGTGGGTTCAAAGAGAAGGGCAAGTTATGACTTGCTCAATGCTGGCAAGAGGTTATTATCACTTCCAGCTCCAGCACTCAAAGTGGATGAGAATATAACTCTGGTGTTGCAACATAAGAATGGCCAGCTTATTATCTCTCCAAAGAAGAAGAAATTGGGCCGTCCCCGAGGCAGCAAGAATAAGCCAAAAACTGCTCGACCTTTGGAACCAGACCTGAAGGAGAGAAAATCTCGTAAATGGAAGAGTCTTAGTAACTCTGCTGAGGTGGTTGAGACTGCACGCGTAGCGAAGGTAACAACTCCTGATGGGATTGACACACTGGACAAGGGAGCAGGAATGGATGAGGAGGCTGCTCCTCCTCGTCCGGAAAATATTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000070 GO:0000228 GO:0000278 GO:0000280 GO:0000775 GO:0000776 GO:0000777 GO:0000778 GO:0000779 GO:0000780 GO:0000793 GO:0000794 GO:0000819 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0005737 GO:0005773 GO:0005774 GO:0005815 GO:0005816 GO:0005856 GO:0005886 GO:0006996 GO:0007049 GO:0007059 GO:0007080 GO:0007127 GO:0008150 GO:0008608 GO:0009987 GO:0015630 GO:0016020 GO:0016043 GO:0022402 GO:0022414 GO:0031090 GO:0031262 GO:0031617 GO:0031974 GO:0031981 GO:0032991 GO:0035974 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044430 GO:0044437 GO:0044444 GO:0044446 GO:0044454 GO:0044464 GO:0045132 GO:0045143 GO:0048285 GO:0050000 GO:0051179 GO:0051234 GO:0051276 GO:0051303 GO:0051310 GO:0051315 GO:0051316 GO:0051321 GO:0051455 GO:0051640 GO:0051641 GO:0051649 GO:0051656 GO:0061982 GO:0070013 GO:0071840 GO:0071944 GO:0098588 GO:0098687 GO:0098805 GO:0098813 GO:0140013 GO:0140014 GO:1903046 GO:1903047

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Nuf2

Protein Analysis

493

Amino Acids

53.89

Weight (kDa)

8.98

Isoelectric Point (pI)

45.31

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DUF4283	PF14111	29 - 100	5.2e-11	Domain of unknown function (DUF4283)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002625)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G61000
fragaria_vesca	FvH4_6g25020 FvH4_6g25020 FvH4_6g25020 FvH4_6g25020 FvH4_6g25020 FvH4_6g25020 FvH4_7g06682 FvH4_7g06682 FvH4_7g06682 FvH4_7g06682 FvH4_7g06682
malus_domestica	MD08G1232500.v1.1 MD08G1233000.v1.1 MD15G1425300.v1.1
prunus_persica	Prupe.1G570900_v2.0.a1 Prupe.1G570900_v2.0.a1
pyrus_communis	pycom08g20190 pycom15g37700
rosa_chinensis	RchiOBHm_Chr1g0336301 RchiOBHm_Chr7g0222021
rosa_laevigata	RLG00000002102 RLG00000029374
rosa_multiflora	Rmu_co8043290.1_g000001 Rmu_sc0001453.1_g000009 Rmu_sc0004325.1_g000003
rosa_roxburghii	Rroxscaffold_3G00237490 Rroxscaffold_4G00315800
rosa_rugosa	Rorug01G0123600 Rorug07G0205100
rosa_samantha	Rh1AG144300 Rh1BG113700 Rh1CG135800 Rh1DG150800 Rh7AG345600 Rh7BG336200 Rh7CG363300 Rh7DG343900
rosa_wichuraiana	Rw0G015220 Rw7G029310

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	1032
AccB7I	CCANNNNNTGG	1 cut(s)	944
AccI	GTMKAC	1 cut(s)	455
AccII	CGCG	1 cut(s)	1386
AccIII	TCCGGA	1 cut(s)	1468
AciI	CCGC	7 cut(s)	65, 68, 239, 484, 490, 692, 824
AclWI	GGATC	4 cut(s)	249, 481, 494, 1093
AcoI	YGGCCR	1 cut(s)	1225
AcsI	RAATTY	1 cut(s)	443
AcuI	CTGAAG	1 cut(s)	1340
AfaI	GTAC	2 cut(s)	16, 519
AfiI	CCNNNNNNNGG	6 cut(s)	238, 465, 469, 499, 514, 944
AflIII	ACRYGT	1 cut(s)	1384
AgeI	ACCGGT	2 cut(s)	17, 739
AgsI	TTSAA	7 cut(s)	148, 224, 229, 929, 979, 1066, 1113
AhdI	GACNNNNNGTC	2 cut(s)	191, 462
AjnI	CCWGG	2 cut(s)	492, 1080
AjuI	GAANNNNNNNTTGG	6 cut(s)	813, 845, 1058, 1090, 1241, 1273
AloI	GAACNNNNNNTCC	2 cut(s)	471, 503
AluBI	AGCT	3 cut(s)	749, 1172, 1231
AluI	AGCT	3 cut(s)	749, 1172, 1231
Alw21I	GWGCWC	2 cut(s)	843, 1026
Alw26I	GTCTC	4 cut(s)	135, 323, 714, 1370
AlwI	GGATC	4 cut(s)	249, 481, 494, 1093
AlwNI	CAGNNNCTG	1 cut(s)	606
Ama87I	CYCGRG	1 cut(s)	1269
Aor13HI	TCCGGA	1 cut(s)	1468
AoxI	GGCC	6 cut(s)	266, 430, 680, 874, 1225, 1261
ApeKI	GCWGC	4 cut(s)	29, 556, 1275, 1454
ApoI	RAATTY	1 cut(s)	443
AsiGI	ACCGGT	2 cut(s)	17, 739
Asp700I	GAANNNNTTC	1 cut(s)	157
AspLEI	GCGC	2 cut(s)	174, 1033
AspS9I	GGNCC	6 cut(s)	122, 266, 431, 680, 1078, 1261
AsuC2I	CCSGG	1 cut(s)	141
AsuHPI	GGTGA	1 cut(s)	559
AvaI	CYCGRG	1 cut(s)	1269
AvaII	GGWCC	2 cut(s)	122, 1078
BalI	TGGCCA	1 cut(s)	1227
BamHI	GGATCC	1 cut(s)	486
Bbv12I	GWGCWC	2 cut(s)	843, 1026
BbvCI	CCTCAGC	1 cut(s)	1365
BbvI	GCAGC	4 cut(s)	16, 568, 1287, 1441
BccI	CCATC	7 cut(s)	305, 343, 625, 635, 691, 966, 1403
BceAI	ACGGC	2 cut(s)	253, 1248
BcgI	CGANNNNNNTGC	4 cut(s)	277, 311, 784, 818
BciT130I	CCWGG	2 cut(s)	494, 1082
BclI	TGATCA	1 cut(s)	448
BcnI	CCSGG	1 cut(s)	141
BcoDI	GTCTC	4 cut(s)	135, 323, 714, 1370
BfaI	CTAG	4 cut(s)	48, 59, 299, 713
BfmI	CTRYAG	3 cut(s)	277, 598, 671
BglII	AGATCT	1 cut(s)	354
BisI	GCNGC	6 cut(s)	30, 66, 557, 693, 1276, 1455
BlsI	GCNGC	6 cut(s)	31, 67, 558, 694, 1277, 1456
Bme1390I	CCNGG	3 cut(s)	141, 494, 1082
Bme18I	GGWCC	2 cut(s)	122, 1078
BmeRI	GACNNNNNGTC	2 cut(s)	191, 462
BmeT110I	CYCGRG	1 cut(s)	1269
BmgT120I	GGNCC	6 cut(s)	122, 266, 431, 680, 1078, 1261
BmiI	GGNNCC	4 cut(s)	488, 738, 910, 1311
BmrFI	CCNGG	3 cut(s)	141, 494, 1082
BmrI	ACTGGG	1 cut(s)	428
BmsI	GCATC	6 cut(s)	183, 190, 519, 616, 626, 739
BmuI	ACTGGG	1 cut(s)	428
BoxI	GACNNNNGTC	1 cut(s)	507
BplI	GAGNNNNNCTC	2 cut(s)	1318, 1350
BpmI	CTGGAG	3 cut(s)	225, 942, 1158
Bpu10I	CCTNAGC	1 cut(s)	1365
BpuEI	CTTGAG	1 cut(s)	1022
BpuMI	CCSGG	1 cut(s)	141
BsaBI	GATNNNNATC	1 cut(s)	353
BsaJI	CCNNGG	6 cut(s)	139, 269, 549, 1017, 1081, 1270
BsaWI	WCCGGW	4 cut(s)	17, 685, 739, 1468
BsaXI	ACNNNNNCTCC	2 cut(s)	791, 821
Bsc4I	CCNNNNNNNGG	6 cut(s)	238, 465, 469, 499, 514, 944
Bse118I	RCCGGY	3 cut(s)	17, 379, 739
Bse1I	ACTGG	3 cut(s)	434, 790, 1428
Bse3DI	GCAATG	1 cut(s)	254
Bse8I	GATNNNNATC	1 cut(s)	353
BseAI	TCCGGA	1 cut(s)	1468
BseBI	CCWGG	2 cut(s)	494, 1082
BseDI	CCNNGG	6 cut(s)	139, 269, 549, 1017, 1081, 1270
BseGI	GGATG	6 cut(s)	504, 534, 641, 977, 1195, 1450
BseJI	GATNNNNATC	1 cut(s)	353
BseLI	CCNNNNNNNGG	6 cut(s)	238, 465, 469, 499, 514, 944
BseMI	GCAATG	1 cut(s)	254
BseMII	CTCAG	3 cut(s)	20, 552, 1356
BseNI	ACTGG	3 cut(s)	434, 790, 1428
BseRI	GAGGAG	4 cut(s)	488, 1449, 1452, 1463
BseXI	GCAGC	4 cut(s)	16, 568, 1287, 1441
BseYI	CCCAGC	1 cut(s)	701
BsgI	GTGCAG	2 cut(s)	575, 1365
Bsh1236I	CGCG	1 cut(s)	1386
BshFI	GGCC	6 cut(s)	268, 432, 682, 876, 1227, 1263
BshTI	ACCGGT	2 cut(s)	17, 739
BsiHKAI	GWGCWC	2 cut(s)	843, 1026
BsiHKCI	CYCGRG	1 cut(s)	1269
BsiSI	CCGG	7 cut(s)	18, 35, 141, 380, 686, 740, 1469
BslFI	GGGAC	4 cut(s)	85, 198, 617, 1251
BslI	CCNNNNNNNGG	6 cut(s)	238, 465, 469, 499, 514, 944
BsmAI	GTCTC	4 cut(s)	135, 323, 714, 1370
BsmFI	GGGAC	4 cut(s)	85, 198, 617, 1251
BsnI	GGCC	6 cut(s)	268, 432, 682, 876, 1227, 1263
BsoBI	CYCGRG	1 cut(s)	1269
Bsp1286I	GDGCHC	2 cut(s)	843, 1026
Bsp13I	TCCGGA	1 cut(s)	1468
Bsp143I	GATC	9 cut(s)	165, 208, 241, 354, 448, 486, 564, 801, 1085
Bsp19I	CCATGG	1 cut(s)	1017
BspACI	CCGC	7 cut(s)	65, 68, 239, 484, 490, 692, 824
BspANI	GGCC	6 cut(s)	268, 432, 682, 876, 1227, 1263
BspCNI	CTCAG	3 cut(s)	19, 553, 1357
BspEI	TCCGGA	1 cut(s)	1468
BspFNI	CGCG	1 cut(s)	1386
BspLI	GGNNCC	4 cut(s)	488, 738, 910, 1311
BspMAI	CTGCAG	2 cut(s)	602, 675
BspPI	GGATC	4 cut(s)	249, 481, 494, 1093
BsrDI	GCAATG	1 cut(s)	254
BsrFI	RCCGGY	3 cut(s)	17, 379, 739
BsrI	ACTGG	3 cut(s)	434, 790, 1428
BssAI	RCCGGY	3 cut(s)	17, 379, 739
BssECI	CCNNGG	6 cut(s)	139, 269, 549, 1017, 1081, 1270
BssMI	GATC	9 cut(s)	165, 208, 241, 354, 448, 486, 564, 801, 1085
BssT1I	CCWWGG	2 cut(s)	549, 1017
Bst2UI	CCWGG	2 cut(s)	494, 1082
Bst4CI	ACNGT	3 cut(s)	95, 334, 608
Bst6I	CTCTTC	1 cut(s)	1340
BstC8I	GCNNGC	4 cut(s)	116, 1147, 1229, 1384
BstDEI	CTNAG	6 cut(s)	6, 561, 770, 994, 1352, 1365
BstDSI	CCRYGG	2 cut(s)	269, 1017
BstF5I	GGATG	6 cut(s)	504, 534, 641, 977, 1195, 1450
BstFNI	CGCG	1 cut(s)	1386
BstHHI	GCGC	2 cut(s)	174, 1033
BstKTI	GATC	9 cut(s)	168, 211, 244, 357, 451, 489, 567, 804, 1088
BstMAI	GTCTC	4 cut(s)	135, 323, 714, 1370
BstMBI	GATC	9 cut(s)	165, 208, 241, 354, 448, 486, 564, 801, 1085
BstMWI	GCNNNNNNNGC	8 cut(s)	29, 35, 44, 265, 679, 698, 1030, 1388
BstNI	CCWGG	2 cut(s)	494, 1082
BstNSI	RCATGY	1 cut(s)	730
BstPAI	GACNNNNGTC	1 cut(s)	507
BstSCI	CCNGG	3 cut(s)	139, 492, 1080
BstSFI	CTRYAG	3 cut(s)	277, 598, 671
BstUI	CGCG	1 cut(s)	1386
BstV1I	GCAGC	4 cut(s)	16, 568, 1287, 1441
BstX2I	RGATCY	2 cut(s)	354, 486
BstXI	CCANNNNNNTGG	1 cut(s)	203
BstYI	RGATCY	2 cut(s)	354, 486
BsuRI	GGCC	6 cut(s)	268, 432, 682, 876, 1227, 1263
BtgI	CCRYGG	2 cut(s)	269, 1017
BtgZI	GCGATG	3 cut(s)	644, 654, 710
BtsCI	GGATG	6 cut(s)	504, 534, 641, 977, 1195, 1450
BtsI	GCAGTG	1 cut(s)	723
BtsIMutI	CAGTG	2 cut(s)	723, 1421
Cac8I	GCNNGC	4 cut(s)	116, 1147, 1229, 1384
CaiI	CAGNNNCTG	1 cut(s)	606
CfoI	GCGC	2 cut(s)	174, 1033
Cfr10I	RCCGGY	3 cut(s)	17, 379, 739
Cfr13I	GGNCC	6 cut(s)	122, 266, 431, 680, 1078, 1261
CseI	GACGC	2 cut(s)	120, 870
Csp6I	GTAC	2 cut(s)	15, 518
CspAI	ACCGGT	2 cut(s)	17, 739
CviQI	GTAC	2 cut(s)	15, 518
DdeI	CTNAG	6 cut(s)	6, 561, 770, 994, 1352, 1365
DpnI	GATC	9 cut(s)	167, 210, 243, 356, 450, 488, 566, 803, 1087
DpnII	GATC	9 cut(s)	165, 208, 241, 354, 448, 486, 564, 801, 1085
DriI	GACNNNNNGTC	2 cut(s)	191, 462
EaeI	YGGCCR	1 cut(s)	1225
Eam1104I	CTCTTC	1 cut(s)	1340
Eam1105I	GACNNNNNGTC	2 cut(s)	191, 462
EarI	CTCTTC	1 cut(s)	1340
EciI	GGCGGA	1 cut(s)	479
Eco130I	CCWWGG	2 cut(s)	549, 1017
Eco47I	GGWCC	2 cut(s)	122, 1078
Eco57I	CTGAAG	1 cut(s)	1340
Eco88I	CYCGRG	1 cut(s)	1269
EcoRII	CCWGG	2 cut(s)	492, 1080
EcoT14I	CCWWGG	2 cut(s)	549, 1017
EcoT22I	ATGCAT	1 cut(s)	732
ErhI	CCWWGG	2 cut(s)	549, 1017
FaqI	GGGAC	4 cut(s)	85, 198, 617, 1251
FauI	CCCGC	2 cut(s)	61, 817
FauNDI	CATATG	1 cut(s)	307
FbaI	TGATCA	1 cut(s)	448
FblI	GTMKAC	1 cut(s)	455
Fnu4HI	GCNGC	6 cut(s)	30, 66, 557, 693, 1276, 1455
FokI	GGATG	6 cut(s)	491, 541, 648, 984, 1202, 1457
Fsp4HI	GCNGC	6 cut(s)	30, 66, 557, 693, 1276, 1455
FspBI	CTAG	4 cut(s)	48, 59, 299, 713
FspI	TGCGCA	1 cut(s)	1032
GlaI	GCGC	2 cut(s)	173, 1032
GluI	GCNGC	6 cut(s)	30, 66, 557, 693, 1276, 1455
GsaI	CCCAGC	1 cut(s)	705
GsuI	CTGGAG	3 cut(s)	225, 942, 1158
HaeIII	GGCC	6 cut(s)	268, 432, 682, 876, 1227, 1263
HapII	CCGG	7 cut(s)	18, 35, 141, 380, 686, 740, 1469
HgaI	GACGC	2 cut(s)	120, 870
HhaI	GCGC	2 cut(s)	174, 1033
Hin6I	GCGC	2 cut(s)	172, 1031
HinP1I	GCGC	2 cut(s)	172, 1031
HincII	GTYRAC	1 cut(s)	456
HindII	GTYRAC	1 cut(s)	456
HinfI	GANTC	4 cut(s)	41, 186, 848, 1348
HpaII	CCGG	7 cut(s)	18, 35, 141, 380, 686, 740, 1469
HphI	GGTGA	1 cut(s)	559
Hpy166II	GTNNAC	3 cut(s)	456, 721, 938
Hpy188I	TCNGA	5 cut(s)	9, 468, 513, 971, 1072
Hpy188III	TCNNGA	6 cut(s)	183, 734, 776, 979, 1406, 1469
Hpy8I	GTNNAC	3 cut(s)	456, 721, 938
Hpy99I	CGWCG	2 cut(s)	468, 513
HpyAV	CCTTC	4 cut(s)	890, 1113, 1315, 1387
HpyCH4III	ACNGT	3 cut(s)	95, 334, 608
HpyF10VI	GCNNNNNNNGC	8 cut(s)	29, 35, 44, 265, 679, 698, 1030, 1388
HpyF3I	CTNAG	6 cut(s)	6, 561, 770, 994, 1352, 1365
HspAI	GCGC	2 cut(s)	172, 1031
Kpn2I	TCCGGA	1 cut(s)	1468
Ksp22I	TGATCA	1 cut(s)	448
Kzo9I	GATC	9 cut(s)	165, 208, 241, 354, 448, 486, 564, 801, 1085
LmnI	GCTCC	8 cut(s)	37, 754, 760, 846, 1029, 1177, 1433, 1462
Lsp1109I	GCAGC	4 cut(s)	16, 568, 1287, 1441
LweI	GCATC	6 cut(s)	183, 190, 519, 616, 626, 739
MaeI	CTAG	4 cut(s)	48, 59, 299, 713
MaeIII	GTNAC	4 cut(s)	245, 882, 1355, 1396
MalI	GATC	9 cut(s)	167, 210, 243, 356, 450, 488, 566, 803, 1087
MboI	GATC	9 cut(s)	165, 208, 241, 354, 448, 486, 564, 801, 1085
MboII	GAAGA	4 cut(s)	153, 1261, 1264, 1357
MfeI	CAATTG	1 cut(s)	942
MflI	RGATCY	2 cut(s)	354, 486
MhlI	GDGCHC	2 cut(s)	843, 1026
MlsI	TGGCCA	1 cut(s)	1227
MluCI	AATT	6 cut(s)	224, 443, 864, 942, 982, 1256
MluI	ACGCGT	1 cut(s)	1384
MluNI	TGGCCA	1 cut(s)	1227
MlyI	GAGTC	3 cut(s)	35, 180, 1357
MmeI	TCCRAC	6 cut(s)	88, 446, 480, 491, 949, 1050
Mox20I	TGGCCA	1 cut(s)	1227
Mph1103I	ATGCAT	1 cut(s)	732
MroI	TCCGGA	1 cut(s)	1468
MroXI	GAANNNNTTC	1 cut(s)	157
MscI	TGGCCA	1 cut(s)	1227
MseI	TTAA	2 cut(s)	588, 1480
MslI	CAYNNNNRTG	2 cut(s)	891, 1221
Msp20I	TGGCCA	1 cut(s)	1227
MspA1I	CMGCKG	1 cut(s)	484
MspI	CCGG	7 cut(s)	18, 35, 141, 380, 686, 740, 1469
MspR9I	CCNGG	3 cut(s)	141, 494, 1082
MunI	CAATTG	1 cut(s)	942
MvaI	CCWGG	2 cut(s)	494, 1082
MvnI	CGCG	1 cut(s)	1386
MwoI	GCNNNNNNNGC	8 cut(s)	29, 35, 44, 265, 679, 698, 1030, 1388
NciI	CCSGG	1 cut(s)	141
NcoI	CCATGG	1 cut(s)	1017
NdeI	CATATG	1 cut(s)	307
NdeII	GATC	9 cut(s)	165, 208, 241, 354, 448, 486, 564, 801, 1085
NlaIV	GGNNCC	4 cut(s)	488, 738, 910, 1311
NmuCI	GTSAC	1 cut(s)	882
NsbI	TGCGCA	1 cut(s)	1032
NsiI	ATGCAT	1 cut(s)	732
NspI	RCATGY	1 cut(s)	730
PcsI	WCGNNNNNNNCGW	1 cut(s)	517
PdmI	GAANNNNTTC	1 cut(s)	157
PfeI	GAWTC	1 cut(s)	848
PflMI	CCANNNNNTGG	1 cut(s)	944
PinAI	ACCGGT	2 cut(s)	17, 739
PkrI	GCNGC	6 cut(s)	31, 67, 558, 694, 1277, 1456
PleI	GAGTC	3 cut(s)	35, 180, 1356
PpsI	GAGTC	3 cut(s)	35, 180, 1356
PshAI	GACNNNNGTC	1 cut(s)	507
Psp6I	CCWGG	2 cut(s)	492, 1080
PspFI	CCCAGC	1 cut(s)	701
PspGI	CCWGG	2 cut(s)	492, 1080
PspN4I	GGNNCC	4 cut(s)	488, 738, 910, 1311
PspPI	GGNCC	6 cut(s)	122, 266, 431, 680, 1078, 1261
PstI	CTGCAG	2 cut(s)	602, 675
PstNI	CAGNNNCTG	1 cut(s)	606
PsuI	RGATCY	2 cut(s)	354, 486
RsaI	GTAC	2 cut(s)	16, 519
RsaNI	GTAC	2 cut(s)	15, 518
RseI	CAYNNNNRTG	2 cut(s)	891, 1221
SalI	GTCGAC	1 cut(s)	454
SaqAI	TTAA	2 cut(s)	588, 1480
SatI	GCNGC	6 cut(s)	30, 66, 557, 693, 1276, 1455
Sau3AI	GATC	9 cut(s)	165, 208, 241, 354, 448, 486, 564, 801, 1085
Sau96I	GGNCC	6 cut(s)	122, 266, 431, 680, 1078, 1261
SchI	GAGTC	3 cut(s)	35, 180, 1357
ScrFI	CCNGG	3 cut(s)	141, 494, 1082
SduI	GDGCHC	2 cut(s)	843, 1026
SfaNI	GCATC	6 cut(s)	183, 190, 519, 616, 626, 739
SfcI	CTRYAG	3 cut(s)	277, 598, 671
SinI	GGWCC	2 cut(s)	122, 1078
SmiMI	CAYNNNNRTG	2 cut(s)	891, 1221
SmlI	CTYRAG	1 cut(s)	1001
SmoI	CTYRAG	1 cut(s)	1001
Sse9I	AATT	6 cut(s)	224, 443, 864, 942, 982, 1256
SsiI	CCGC	7 cut(s)	65, 68, 239, 484, 490, 692, 824
SspI	AATATT	1 cut(s)	1477
SspMI	CTAG	4 cut(s)	48, 59, 299, 713
StyD4I	CCNGG	3 cut(s)	139, 492, 1080
StyI	CCWWGG	2 cut(s)	549, 1017
TaaI	ACNGT	3 cut(s)	95, 334, 608
TaqI	TCGA	3 cut(s)	164, 455, 1300
TasI	AATT	6 cut(s)	224, 443, 864, 942, 982, 1256
TauI	GCSGC	2 cut(s)	68, 695
TfiI	GAWTC	1 cut(s)	848
Tru1I	TTAA	2 cut(s)	588, 1480
Tru9I	TTAA	2 cut(s)	588, 1480
TscAI	CASTG	2 cut(s)	723, 1428
TseFI	GTSAC	1 cut(s)	882
TseI	GCWGC	4 cut(s)	29, 556, 1275, 1454
Tsp45I	GTSAC	1 cut(s)	882
TspDTI	ATGAA	2 cut(s)	249, 795
TspGWI	ACGGA	4 cut(s)	89, 276, 452, 497
TspRI	CASTG	2 cut(s)	723, 1428
Van91I	CCANNNNNTGG	1 cut(s)	944
VpaK11BI	GGWCC	2 cut(s)	122, 1078
XapI	RAATTY	1 cut(s)	443
XceI	RCATGY	1 cut(s)	730
XcmI	CCANNNNNNNNNTGG	1 cut(s)	884
XmiI	GTMKAC	1 cut(s)	455
XmnI	GAANNNNTTC	1 cut(s)	157
XspI	CTAG	4 cut(s)	48, 59, 299, 713
Zsp2I	ATGCAT	1 cut(s)	732

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.