Prupe.2G023300_v2.0.a1

Protein of unknown function (DUF616)

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
Physical Location & Seq
Reverse (-)
2263719 .. 2267570
3852 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G023300.4

Sequence Viewer

Length: 1446 bp
ATGTTCAACAACAACAGCATATCAATCTCAGTCTCCGATGACGAACCGGACGAACTCGGCAGGATGCGAGTCCGAGTTAGAAGGAAGCGCAAGAAACCCGGCCACCGACTCAAGAACGAGTTCTTGCACCGAGTCGTTCGGAAGCTCGTCAGATACTGGGCTCTTCTAATCTTTCTCCCAGCCCTTGGGTTGCTCCTCTACGAGGCATCGAGGATCGGGAGGAAGCCGAGGTCGGTGGCCAACACAGAACTCGGTGCATCAGAAAAGTCGACCTTGGTGGACTCGGAACTCAGTAACGTCACGAACCCGAGTTTGGAGAAGAAATCGGACGGGAATTTGAATCGGCTTGATGCTACGACTCGCGTTGTAGGAGGCGTTAGGCAACGTTGCTTGAAGATCCTATCTCCTGAAGAACTTGAGCATCTGGAAATTCCTGTGCGTGAAGAGGCCAATAGTCCTGTTAGTAAAGTGTTATACATATCAGAGAACGATACTCCATTCTTAGGAGGGAACAGCACTCTGTCTCAAGAGCACACAGATGCCACAAGATTTAATTTATTTACTGGAAGTCAAACTCTAGATCAAAGATCGAAAACGTTTAAGGTAAATGAAACTGTTAGTATGAACTGTGGTTTCTACAGTGAAAATGGAGGGTTTAAGATCTCAAATGAAGATAAAGACTACATGCAAAGTTGCAAGGTTGTAGTGTCCACATGTGCATTTGGTGGTGGAGATGATCTTTATCAGCCTATTGGAATGTCAGAGGAATCACTTCGAAAGGTTTGCTATGTCGCATTTTGGGATGAAGTTACTCTAAGTTCACAGGAATCAGCTGAACATAGAATTGATGGCTATGGATTTATTGGAAAATGGCGCATTGTGGTTGTTAGGGATCTTCCCTTCGCGGACCAAAGGTTAAATGGAAAAATCCCAAAGATGTTGGCCCATCGTCTTTTTCCTCATGCAAAGTATTCCATTTGGGTAGATTCAAAATCCCAATTTAGGAGAGACCCCTTAGGGGTGCTTGAAGCCCTTCTTTGGCGTTCAAATTCTGTACTCGCAATCTCAGAACATGGAGCTCGCAGTAGCGTTTATGATGAGGCGAAGGCTGTTGTCAAGAAAAACAAGGCCAAACCAGAAGAAGTTGAGGTGCAGTTGAGTCAGTACCGCCATGATGGCTTACCAGAAGACAAGAGGTTCAACGGAAAGAAGGCTTTAGCCGAAGCATCTGTTATTGTGAGGGAGCATACATCATTGACTAATATGTTCATGTGCCTCTGGTTCAATGAGGTGGTTCGTTTCACTTCTCGTGATCAGCTGAGTTTCCCATATGTATTATGGCGGTTGAAAGTGCTCAAGAACATCAACATGTTCCCTGTATGCACCCGGAAAGATCTTGTTAATAGTATGGGCCACATACGAAAGGCTAAGCCACTAAGAAGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

482

Amino Acids

54.82

Weight (kDa)

9.42

Isoelectric Point (pI)

40.35

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 185
AccI GTMKAC 1 cut(s) 269
AccII CGCG 2 cut(s) 363, 905
AciI CCGC 3 cut(s) 905, 1168, 1342
AclI AACGTT 2 cut(s) 385, 596
AclWI GGATC 3 cut(s) 221, 391, 900
AcoI YGGCCR 2 cut(s) 100, 237
AcsI RAATTY 3 cut(s) 334, 429, 1048
AcuI CTGAAG 1 cut(s) 429
AfaI GTAC 2 cut(s) 1056, 1166
AfiI CCNNNNNNNGG 7 cut(s) 185, 202, 313, 503, 1002, 1018, 1038
AflIII ACRYGT 2 cut(s) 713, 1368
AgsI TTSAA 9 cut(s) 7, 340, 394, 990, 1028, 1047, 1201, 1285, 1348
AjuI GAANNNNNNNTTGG 2 cut(s) 296, 328
AluBI AGCT 4 cut(s) 145, 833, 1079, 1318
AluI AGCT 4 cut(s) 145, 833, 1079, 1318
Alw21I GWGCWC 3 cut(s) 534, 1081, 1356
Alw26I GTCTC 3 cut(s) 37, 528, 1002
AlwI GGATC 3 cut(s) 221, 391, 900
AlwNI CAGNNNCTG 1 cut(s) 156
Ama87I CYCGRG 1 cut(s) 307
AoxI GGCC 6 cut(s) 100, 237, 447, 942, 1128, 1411
ApoI RAATTY 3 cut(s) 334, 429, 1048
Asp700I GAANNNNTTC 3 cut(s) 119, 771, 1032
AspLEI GCGC 2 cut(s) 90, 876
AspS9I GGNCC 3 cut(s) 907, 943, 1411
AsuC2I CCSGG 2 cut(s) 99, 1387
AsuII TTCGAA 1 cut(s) 775
AvaI CYCGRG 1 cut(s) 307
AvaII GGWCC 1 cut(s) 907
AxyI CCTNAGG 1 cut(s) 1015
BalI TGGCCA 1 cut(s) 239
BanII GRGCYC 2 cut(s) 163, 1081
BauI CACGAG 1 cut(s) 1308
BbsI GAAGAC 1 cut(s) 1194
Bbv12I GWGCWC 3 cut(s) 534, 1081, 1356
BccI CCATC 3 cut(s) 842, 954, 1169
BcgI CGANNNNNNTGC 2 cut(s) 765, 799
BclI TGATCA 1 cut(s) 1312
BcnI CCSGG 2 cut(s) 99, 1387
BcoDI GTCTC 3 cut(s) 37, 528, 1002
BfaI CTAG 1 cut(s) 578
BfmI CTRYAG 1 cut(s) 637
BglI GCCNNNNNGGC 1 cut(s) 1176
BglII AGATCT 2 cut(s) 660, 1393
BlpI GCTNAGC 1 cut(s) 1428
Bme1390I CCNGG 2 cut(s) 99, 1387
Bme18I GGWCC 1 cut(s) 907
BmeT110I CYCGRG 1 cut(s) 307
BmgT120I GGNCC 3 cut(s) 907, 943, 1411
BmrFI CCNGG 2 cut(s) 99, 1387
BmrI ACTGGG 1 cut(s) 166
BmsI GCATC 7 cut(s) 54, 215, 266, 340, 430, 529, 1235
BmuI ACTGGG 1 cut(s) 166
BpiI GAAGAC 1 cut(s) 1194
Bpu1102I GCTNAGC 1 cut(s) 1428
Bpu14I TTCGAA 1 cut(s) 775
BpuEI CTTGAG 4 cut(s) 95, 437, 510, 1340
BpuMI CCSGG 2 cut(s) 99, 1387
BsaBI GATNNNNATC 1 cut(s) 741
BsaI GGTCTC 1 cut(s) 1002
BsaJI CCNNGG 3 cut(s) 184, 227, 273
BsaWI WCCGGW 1 cut(s) 46
Bsc4I CCNNNNNNNGG 7 cut(s) 185, 202, 313, 503, 1002, 1018, 1038
Bse1I ACTGG 2 cut(s) 161, 568
Bse21I CCTNAGG 1 cut(s) 1015
Bse8I GATNNNNATC 1 cut(s) 741
BseDI CCNNGG 3 cut(s) 184, 227, 273
BseGI GGATG 2 cut(s) 69, 808
BseJI GATNNNNATC 1 cut(s) 741
BseLI CCNNNNNNNGG 7 cut(s) 185, 202, 313, 503, 1002, 1018, 1038
BseMII CTCAG 4 cut(s) 42, 304, 1080, 1310
BseNI ACTGG 2 cut(s) 161, 568
BseRI GAGGAG 1 cut(s) 185
BseYI CCCAGC 1 cut(s) 178
BsgI GTGCAG 1 cut(s) 1172
Bsh1236I CGCG 2 cut(s) 363, 905
BshFI GGCC 6 cut(s) 102, 239, 449, 944, 1130, 1413
BsiHKAI GWGCWC 3 cut(s) 534, 1081, 1356
BsiHKCI CYCGRG 1 cut(s) 307
BsiSI CCGG 3 cut(s) 47, 99, 1387
BslI CCNNNNNNNGG 7 cut(s) 185, 202, 313, 503, 1002, 1018, 1038
BsmAI GTCTC 3 cut(s) 37, 528, 1002
BsnI GGCC 6 cut(s) 102, 239, 449, 944, 1130, 1413
Bso31I GGTCTC 1 cut(s) 1002
BsoBI CYCGRG 1 cut(s) 307
Bsp119I TTCGAA 1 cut(s) 775
Bsp1286I GDGCHC 4 cut(s) 163, 534, 1081, 1356
Bsp143I GATC 9 cut(s) 213, 396, 580, 587, 660, 736, 892, 1312, 1393
Bsp1720I GCTNAGC 1 cut(s) 1428
BspACI CCGC 3 cut(s) 905, 1168, 1342
BspANI GGCC 6 cut(s) 102, 239, 449, 944, 1130, 1413
BspCNI CTCAG 4 cut(s) 41, 303, 1079, 1311
BspFNI CGCG 2 cut(s) 363, 905
BspPI GGATC 3 cut(s) 221, 391, 900
BspQI GCTCTTC 1 cut(s) 168
BspT104I TTCGAA 1 cut(s) 775
BspTNI GGTCTC 1 cut(s) 1002
BsrI ACTGG 2 cut(s) 161, 568
BssECI CCNNGG 3 cut(s) 184, 227, 273
BssMI GATC 9 cut(s) 213, 396, 580, 587, 660, 736, 892, 1312, 1393
BssSI CACGAG 1 cut(s) 1308
BssT1I CCWWGG 2 cut(s) 184, 273
Bst2BI CACGAG 1 cut(s) 1308
Bst4CI ACNGT 3 cut(s) 616, 629, 641
Bst6I CTCTTC 2 cut(s) 168, 438
BstBI TTCGAA 1 cut(s) 775
BstC8I GCNNGC 1 cut(s) 1081
BstDEI CTNAG 9 cut(s) 28, 290, 502, 815, 1015, 1066, 1319, 1428, 1436
BstENI CCTNNNNNAGG 1 cut(s) 200
BstF5I GGATG 2 cut(s) 69, 808
BstFNI CGCG 2 cut(s) 363, 905
BstHHI GCGC 2 cut(s) 90, 876
BstKTI GATC 9 cut(s) 216, 399, 583, 590, 663, 739, 895, 1315, 1396
BstMAI GTCTC 3 cut(s) 37, 528, 1002
BstMBI GATC 9 cut(s) 213, 396, 580, 587, 660, 736, 892, 1312, 1393
BstMWI GCNNNNNNNGC 1 cut(s) 1176
BstNSI RCATGY 3 cut(s) 688, 717, 1372
BstSCI CCNGG 2 cut(s) 97, 1385
BstSFI CTRYAG 1 cut(s) 637
BstUI CGCG 2 cut(s) 363, 905
BstV2I GAAGAC 1 cut(s) 1194
BstX2I RGATCY 4 cut(s) 396, 660, 892, 1393
BstYI RGATCY 4 cut(s) 396, 660, 892, 1393
Bsu36I CCTNAGG 1 cut(s) 1015
BsuRI GGCC 6 cut(s) 102, 239, 449, 944, 1130, 1413
BtsCI GGATG 2 cut(s) 69, 808
BtsIMutI CAGTG 1 cut(s) 646
Cac8I GCNNGC 1 cut(s) 1081
CaiI CAGNNNCTG 1 cut(s) 156
CfoI GCGC 2 cut(s) 90, 876
Cfr13I GGNCC 3 cut(s) 907, 943, 1411
Csp6I GTAC 2 cut(s) 1055, 1165
CviAII CATG 7 cut(s) 685, 714, 962, 1073, 1172, 1270, 1369
CviQI GTAC 2 cut(s) 1055, 1165
DdeI CTNAG 9 cut(s) 28, 290, 502, 815, 1015, 1066, 1319, 1428, 1436
DpnI GATC 9 cut(s) 215, 398, 582, 589, 662, 738, 894, 1314, 1395
DpnII GATC 9 cut(s) 213, 396, 580, 587, 660, 736, 892, 1312, 1393
EaeI YGGCCR 2 cut(s) 100, 237
Eam1104I CTCTTC 2 cut(s) 168, 438
EarI CTCTTC 2 cut(s) 168, 438
Ecl136II GAGCTC 1 cut(s) 1079
Eco130I CCWWGG 2 cut(s) 184, 273
Eco24I GRGCYC 2 cut(s) 163, 1081
Eco31I GGTCTC 1 cut(s) 1002
Eco47I GGWCC 1 cut(s) 907
Eco53kI GAGCTC 1 cut(s) 1079
Eco57I CTGAAG 1 cut(s) 429
Eco81I CCTNAGG 1 cut(s) 1015
Eco88I CYCGRG 1 cut(s) 307
EcoICRI GAGCTC 1 cut(s) 1079
EcoNI CCTNNNNNAGG 1 cut(s) 200
EcoT14I CCWWGG 2 cut(s) 184, 273
EcoT38I GRGCYC 2 cut(s) 163, 1081
ErhI CCWWGG 2 cut(s) 184, 273
FaeI CATG 7 cut(s) 688, 717, 965, 1076, 1175, 1273, 1372
FalI AAGNNNNNCTT 4 cut(s) 257, 289, 1020, 1052
FatI CATG 7 cut(s) 684, 713, 961, 1072, 1171, 1269, 1368
FauNDI CATATG 1 cut(s) 1330
FbaI TGATCA 1 cut(s) 1312
FblI GTMKAC 1 cut(s) 269
FokI GGATG 2 cut(s) 76, 815
FriOI GRGCYC 2 cut(s) 163, 1081
FspBI CTAG 1 cut(s) 578
GlaI GCGC 2 cut(s) 89, 875
GsaI CCCAGC 1 cut(s) 182
HaeIII GGCC 6 cut(s) 102, 239, 449, 944, 1130, 1413
HapII CCGG 3 cut(s) 47, 99, 1387
HhaI GCGC 2 cut(s) 90, 876
Hin1II CATG 7 cut(s) 688, 717, 965, 1076, 1175, 1273, 1372
Hin6I GCGC 2 cut(s) 88, 874
HinP1I GCGC 2 cut(s) 88, 874
HincII GTYRAC 1 cut(s) 270
HindII GTYRAC 1 cut(s) 270
HpaII CCGG 3 cut(s) 47, 99, 1387
Hpy166II GTNNAC 4 cut(s) 270, 280, 711, 821
Hpy8I GTNNAC 4 cut(s) 270, 280, 711, 821
HpyAV CCTTC 5 cut(s) 75, 910, 1043, 1099, 1204
HpyCH4III ACNGT 3 cut(s) 616, 629, 641
HpyCH4IV ACGT 3 cut(s) 297, 385, 596
HpyCH4V TGCA 8 cut(s) 127, 257, 688, 696, 719, 965, 1153, 1383
HpyF10VI GCNNNNNNNGC 1 cut(s) 1176
HpyF3I CTNAG 9 cut(s) 28, 290, 502, 815, 1015, 1066, 1319, 1428, 1436
HpySE526I ACGT 3 cut(s) 297, 385, 596
Hsp92II CATG 7 cut(s) 688, 717, 965, 1076, 1175, 1273, 1372
HspAI GCGC 2 cut(s) 88, 874
Ksp22I TGATCA 1 cut(s) 1312
Kzo9I GATC 9 cut(s) 213, 396, 580, 587, 660, 736, 892, 1312, 1393
LguI GCTCTTC 1 cut(s) 168
LmnI GCTCC 3 cut(s) 198, 1076, 1243
LweI GCATC 7 cut(s) 54, 215, 266, 340, 430, 529, 1235
MaeI CTAG 1 cut(s) 578
MaeII ACGT 3 cut(s) 297, 385, 596
MaeIII GTNAC 3 cut(s) 293, 298, 808
MalI GATC 9 cut(s) 215, 398, 582, 589, 662, 738, 894, 1314, 1395
MboI GATC 9 cut(s) 213, 396, 580, 587, 660, 736, 892, 1312, 1393
MboII GAAGA 9 cut(s) 155, 331, 406, 422, 455, 683, 887, 1151, 1199
MflI RGATCY 4 cut(s) 396, 660, 892, 1393
MhlI GDGCHC 4 cut(s) 163, 534, 1081, 1356
MlsI TGGCCA 1 cut(s) 239
MluCI AATT 6 cut(s) 334, 429, 553, 843, 998, 1048
MluNI TGGCCA 1 cut(s) 239
MlyI GAGTC 6 cut(s) 78, 102, 141, 275, 352, 1168
Mox20I TGGCCA 1 cut(s) 239
MroXI GAANNNNTTC 3 cut(s) 119, 771, 1032
MscI TGGCCA 1 cut(s) 239
MseI TTAA 5 cut(s) 552, 600, 657, 917, 1401
MslI CAYNNNNRTG 2 cut(s) 537, 1367
Msp20I TGGCCA 1 cut(s) 239
MspA1I CMGCKG 2 cut(s) 833, 1318
MspI CCGG 3 cut(s) 47, 99, 1387
MspR9I CCNGG 2 cut(s) 99, 1387
MvnI CGCG 2 cut(s) 363, 905
MwoI GCNNNNNNNGC 1 cut(s) 1176
NciI CCSGG 2 cut(s) 99, 1387
NdeI CATATG 1 cut(s) 1330
NdeII GATC 9 cut(s) 213, 396, 580, 587, 660, 736, 892, 1312, 1393
NlaIII CATG 7 cut(s) 688, 717, 965, 1076, 1175, 1273, 1372
NmeAIII GCCGAG 2 cut(s) 36, 252
NmuCI GTSAC 1 cut(s) 298
NspI RCATGY 3 cut(s) 688, 717, 1372
NspV TTCGAA 1 cut(s) 775
PciI ACATGT 2 cut(s) 713, 1368
PciSI GCTCTTC 1 cut(s) 168
PcsI WCGNNNNNNNCGW 1 cut(s) 48
PdmI GAANNNNTTC 3 cut(s) 119, 771, 1032
PfeI GAWTC 4 cut(s) 340, 767, 827, 986
PflMI CCANNNNNTGG 1 cut(s) 185
PleI GAGTC 6 cut(s) 77, 102, 140, 275, 352, 1167
PpsI GAGTC 6 cut(s) 77, 102, 140, 275, 352, 1167
PscI ACATGT 2 cut(s) 713, 1368
Psp124BI GAGCTC 1 cut(s) 1081
Psp1406I AACGTT 2 cut(s) 385, 596
PspFI CCCAGC 1 cut(s) 178
PspPI GGNCC 3 cut(s) 907, 943, 1411
PstNI CAGNNNCTG 1 cut(s) 156
PsuI RGATCY 4 cut(s) 396, 660, 892, 1393
PvuII CAGCTG 2 cut(s) 833, 1318
RsaI GTAC 2 cut(s) 1056, 1166
RsaNI GTAC 2 cut(s) 1055, 1165
RseI CAYNNNNRTG 2 cut(s) 537, 1367
SacI GAGCTC 1 cut(s) 1081
SalI GTCGAC 1 cut(s) 268
SapI GCTCTTC 1 cut(s) 168
SaqAI TTAA 5 cut(s) 552, 600, 657, 917, 1401
Sau3AI GATC 9 cut(s) 213, 396, 580, 587, 660, 736, 892, 1312, 1393
Sau96I GGNCC 3 cut(s) 907, 943, 1411
SchI GAGTC 6 cut(s) 78, 102, 141, 275, 352, 1168
ScrFI CCNGG 2 cut(s) 99, 1387
SduI GDGCHC 4 cut(s) 163, 534, 1081, 1356
SfaNI GCATC 7 cut(s) 54, 215, 266, 340, 430, 529, 1235
SfcI CTRYAG 1 cut(s) 637
SfuI TTCGAA 1 cut(s) 775
SinI GGWCC 1 cut(s) 907
SmiMI CAYNNNNRTG 2 cut(s) 537, 1367
SmlI CTYRAG 4 cut(s) 110, 416, 525, 1355
SmoI CTYRAG 4 cut(s) 110, 416, 525, 1355
Sse9I AATT 6 cut(s) 334, 429, 553, 843, 998, 1048
SsiI CCGC 3 cut(s) 905, 1168, 1342
SspMI CTAG 1 cut(s) 578
SstI GAGCTC 1 cut(s) 1081
StyD4I CCNGG 2 cut(s) 97, 1385
StyI CCWWGG 2 cut(s) 184, 273
TaaI ACNGT 3 cut(s) 616, 629, 641
TaiI ACGT 3 cut(s) 300, 388, 599
TaqI TCGA 4 cut(s) 209, 269, 590, 775
TasI AATT 6 cut(s) 334, 429, 553, 843, 998, 1048
TatI WGTACW 1 cut(s) 1054
TfiI GAWTC 4 cut(s) 340, 767, 827, 986
Tru1I TTAA 5 cut(s) 552, 600, 657, 917, 1401
Tru9I TTAA 5 cut(s) 552, 600, 657, 917, 1401
TscAI CASTG 1 cut(s) 646
TseFI GTSAC 1 cut(s) 298
Tsp45I GTSAC 1 cut(s) 298
TspDTI ATGAA 5 cut(s) 624, 638, 684, 819, 1258
TspGWI ACGGA 1 cut(s) 1218
TspRI CASTG 1 cut(s) 646
Van91I CCANNNNNTGG 1 cut(s) 185
VpaK11BI GGWCC 1 cut(s) 907
XagI CCTNNNNNAGG 1 cut(s) 200
XapI RAATTY 3 cut(s) 334, 429, 1048
XbaI TCTAGA 1 cut(s) 577
XceI RCATGY 3 cut(s) 688, 717, 1372
XcmI CCANNNNNNNNNTGG 2 cut(s) 917, 1335
XmiI GTMKAC 1 cut(s) 269
XmnI GAANNNNTTC 3 cut(s) 119, 771, 1032
XspI CTAG 1 cut(s) 578
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.