Rorug04G0153900

Mediator of RNA polymerase II transcription subunit 33A-like

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000004
Physical Location & Seq
Reverse (-)
26962599 .. 26973737
11139 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug04G0153900.1

Sequence Viewer

Length: 2232 bp
ATGGTTGCTTCGGATATAATATGTCCGACCGAGGATGCCGTTCAGGCTTTTTTGGACCACTTGGTTGACCCAATACTTCCAGCAAAATCTTCTCTGCGGGATACCCCATCACTCTCTCAACAACAGTCAGTTGCAAAACAGGTGCATGCTGTTGTGCTACTATACAACTACTACCACAGAAAGCAATGTCCAAAGCTAGAGGTTTTGTGTTTTAATTCGTTTTGCAAGTTGGTTTTGGATCTTAAACCAGCCTTGCTGGCTCATATGAAATTTATGAAAAGATCAGGTGATACTGAATTGGTTGATCAGGAGAAACAACTTTCAGTTACCGAAAGAACAATAATGGAAGCATGTCAAATATCTACAAGTTTAGATGCATCCATGGGTGCTCCAAACACTGAGGGATGGCCAATTACCAAAGTTACAGTTCTTTTAGTTGACTCCAAGAAGGAGAACTGCTATTTGCAATTCAGTTCCAATTCCATGACCCAGGGGGTTTGGTCAGTGATTGATAAAAATTTGGAGGTCAGAGATCACAGTTCAGAAGACACAAGGGGGTTAAAACATGTAAACAAAAACAAAAGAGTCACTGGAAAACCTTCAAGAGGAGAACCAAGGATTGATGAAACTAGTTGTCAAAAACTGGCATATTCAGCAATTACTGAGGCTACAGGTATTAGTCAAAATGATCTTCTTGTTTTGGAAAGCCATGTTGTATTTTCGGATAGTAAAGAAAAGGCAGCTGCTTGTTTTTTTATAGTTCAGTGTACCCAATCAGGCAAGGGTGATATTCAGCTTCCTATTAAAGATGTTATTGACAGCCTCCAGGGTCCTCTGGTCACAAAGAATTCCCGCGGCTGGACAGTTACAACAGTTGTTGAGTACTTCCATGTGCTTCCTTATGCTGAGATTTTGTCCGACTGGTTTCATAGGAGAGAATTCTCATATGGTTTGAAAGATTCAAGGCTAGGAGCGGGAAATGTAAATGTGGCTAGCCCTAAAAGGACCGAAACACCTTCCAAACCAGGAATTTGCAAAAATCAAGAGAAGTCTCATGTAATTGATGTTGTGATAGAGGATCTTGGAAGCAACACAAAAAATTCTGAACCCAAATCATGGGAGCAGAAAGATAGCAGTGGATGTTGCAAGATAGATCTGGCTCATGCTTTCAATGGGACTCAGGAAATGGAGTTGGAGGAGTCTTCCATGGTAGCCTCGAAGAAGGAAAAAAATTGTAAGAAAATTTCAAGTCCCGTTCAAGTTGTCAGCCACCAAGATGACATGCATTCCTGTATCGAAAGTGAAAAGCCCAAAACCCAAGACAAGTTGTCTCATGTAAATTGCGTCAGGATAAAGGATATTGGGAACAACATAAGCAGTTCTACGCCTCAATCATATAAGCAGAAAGATACCACTGTATATAAAAATACAAGTCCGGCTGAAGCTTCCAATGGGCCTCAGAAATTGTGCATGGATGACTCTTCCATGGTTCCCTTGCAGAATGTAGAAAGCTGTGAGAAAATTTCAAGCACCATTCAAGTTGTCAACCAGCAAAAAAAGATTACCTCCATTCGCTCTGAACTAAATGGCTCAGTAAGTAATACGAAGGTTGAGACTGTGAACCGGACAAGTCCATCCCTTACTGACAGGCTACAGATTAGTATAGCTTCAAAAGAACACATCTTGTCAGAAACTGCTTTGAAAGTTCTTATGAAAAAAAGGAATGAGCTGTCTATTAAGAAGCGCAATATAGAGGATGAGCTTGCTCGGTGTGAAAAAGATATCCAGACAATTATAAATGGTGGTGAAGATGGCTCAGCAGTAATCGTTGAGTCTCTTATAGAAGGTTGTAATGATGGATATCTAAGAAATGAAAGGACTCATACACTGCTAGATGAGGAATGCCCTCCTAAATCTGTCAAGAGGAAGAGGCTGTCAGAGGCTATCCTTGACAAGCAAAATCAATGCCAGGAATTGGATGGCATATGTTGCGAAAACAGCTGGGTGTTACCAACTTATTGTGTATCCCTATCAGATGGAGGATTCCAAGCTAATGTAACCGTAGAAGGTCTGGACTTCAAGTGTTCACGTGAGGGTGATCTGTGTTCCAGTCCTAGTGAAGCAAGAGAATCAGCTGCATTGCAAATGTTGGTAAAGTTGAGGAGCATGGCTGCCCAAGCCAAAAGGTTGCAGGTCAGGAATGTGAAAGGTACCATTGGTCAAATGGAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

743

Amino Acids

82.44

Weight (kDa)

6.5

Isoelectric Point (pI)

47.57

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF7913 PF25500 7 - 125 3.4e-55 Domain of unknown function (DUF7913)
DUF7915 PF25502 163 - 311 3.9e-63 Domain of unknown function (DUF7915)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1796
Acc36I ACCTGC 1 cut(s) 2182
Acc65I GGTACC 1 cut(s) 2210
AccB1I GGYRCC 1 cut(s) 2210
AccB7I CCANNNNNTGG 2 cut(s) 1116, 1975
AccBSI CCGCTC 1 cut(s) 974
AccII CGCG 1 cut(s) 855
AciI CCGC 4 cut(s) 97, 853, 855, 974
AclWI GGATC 2 cut(s) 246, 1086
AcoI YGGCCR 1 cut(s) 407
AcsI RAATTY 8 cut(s) 269, 517, 847, 938, 1029, 1099, 1242, 1521
AcuI CTGAAG 1 cut(s) 1461
AcvI CACGTG 1 cut(s) 2090
AfaI GTAC 3 cut(s) 769, 884, 2212
AfiI CCNNNNNNNGG 4 cut(s) 605, 858, 1116, 1975
AflIII ACRYGT 1 cut(s) 565
AhdI GACNNNNNGTC 1 cut(s) 1327
AhlI ACTAGT 1 cut(s) 629
AjnI CCWGG 4 cut(s) 489, 825, 1024, 1968
Alw21I GWGCWC 1 cut(s) 391
Alw26I GTCTC 4 cut(s) 1056, 1335, 1607, 1839
AlwI GGATC 2 cut(s) 246, 1086
AlwNI CAGNNNCTG 1 cut(s) 1694
AoxI GGCC 2 cut(s) 407, 1454
ApeKI GCWGC 4 cut(s) 740, 743, 2135, 2171
ApoI RAATTY 8 cut(s) 269, 517, 847, 938, 1029, 1099, 1242, 1521
Asp700I GAANNNNTTC 1 cut(s) 598
Asp718I GGTACC 1 cut(s) 2210
AspLEI GCGC 1 cut(s) 1746
AspS9I GGNCC 4 cut(s) 55, 830, 1005, 1454
AsuHPI GGTGA 4 cut(s) 299, 797, 1817, 2108
AsuNHI GCTAGC 1 cut(s) 992
AvaII GGWCC 3 cut(s) 55, 830, 1005
BaeI ACNNNNGTAYC 2 cut(s) 1401, 1434
BalI TGGCCA 1 cut(s) 409
BanI GGYRCC 1 cut(s) 2210
BbrPI CACGTG 1 cut(s) 2090
BbsI GAAGAC 2 cut(s) 552, 1194
Bbv12I GWGCWC 1 cut(s) 391
BbvI GCAGC 4 cut(s) 730, 752, 2122, 2158
BccI CCATC 7 cut(s) 115, 399, 1642, 1805, 1850, 1973, 2030
BceAI ACGGC 1 cut(s) 23
BciT130I CCWGG 4 cut(s) 491, 827, 1026, 1970
BciVI GTATCC 2 cut(s) 94, 2035
BclI TGATCA 1 cut(s) 304
BcoDI GTCTC 4 cut(s) 1056, 1335, 1607, 1839
BcuI ACTAGT 1 cut(s) 629
BfaI CTAG 6 cut(s) 197, 630, 968, 993, 1892, 2115
BfmI CTRYAG 2 cut(s) 669, 1652
BfuAI ACCTGC 1 cut(s) 2182
BfuI GTATCC 2 cut(s) 94, 2035
BglI GCCNNNNNGGC 2 cut(s) 44, 257
BglII AGATCT 1 cut(s) 1153
BisI GCNGC 5 cut(s) 741, 744, 856, 2136, 2172
BlpI GCTNAGC 1 cut(s) 1816
BlsI GCNGC 5 cut(s) 742, 745, 857, 2137, 2173
BmcAI AGTACT 1 cut(s) 884
Bme1390I CCNGG 4 cut(s) 491, 827, 1026, 1970
Bme18I GGWCC 3 cut(s) 55, 830, 1005
BmeRI GACNNNNNGTC 1 cut(s) 1327
BmgT120I GGNCC 4 cut(s) 55, 830, 1005, 1454
BmiI GGNNCC 3 cut(s) 831, 1491, 2212
BmrFI CCNGG 4 cut(s) 491, 827, 1026, 1970
BmsI GCATC 3 cut(s) 25, 364, 386
BmtI GCTAGC 1 cut(s) 996
BpiI GAAGAC 2 cut(s) 552, 1194
BpmI CTGGAG 1 cut(s) 809
Bpu1102I GCTNAGC 1 cut(s) 1816
BsaAI YACGTR 1 cut(s) 2090
BsaBI GATNNNNATC 1 cut(s) 1860
BsaJI CCNNGG 9 cut(s) 30, 381, 489, 490, 614, 826, 853, 1206, 1485
BsaWI WCCGGW 1 cut(s) 1623
Bsc4I CCNNNNNNNGG 4 cut(s) 605, 858, 1116, 1975
Bse1I ACTGG 4 cut(s) 595, 648, 926, 2109
Bse3DI GCAATG 2 cut(s) 191, 2138
Bse8I GATNNNNATC 1 cut(s) 1860
BseBI CCWGG 4 cut(s) 491, 827, 1026, 1970
BseDI CCNNGG 9 cut(s) 30, 381, 489, 490, 614, 826, 853, 1206, 1485
BseGI GGATG 8 cut(s) 40, 377, 410, 1145, 1480, 1634, 1762, 1984
BseJI GATNNNNATC 1 cut(s) 1860
BseLI CCNNNNNNNGG 4 cut(s) 605, 858, 1116, 1975
BseMI GCAATG 2 cut(s) 191, 2138
BseMII CTCAG 7 cut(s) 390, 654, 897, 1193, 1472, 1605, 1830
BseNI ACTGG 4 cut(s) 595, 648, 926, 2109
BseRI GAGGAG 3 cut(s) 621, 1211, 2176
BseXI GCAGC 4 cut(s) 730, 752, 2122, 2158
BseYI CCCAGC 1 cut(s) 2001
Bsh1236I CGCG 1 cut(s) 855
Bsh1285I CGRYCG 1 cut(s) 30
BshFI GGCC 2 cut(s) 409, 1456
BshNI GGYRCC 1 cut(s) 2210
BsiEI CGRYCG 1 cut(s) 30
BsiHKAI GWGCWC 1 cut(s) 391
BsiSI CCGG 2 cut(s) 1436, 1624
BslFI GGGAC 2 cut(s) 1189, 1236
BslI CCNNNNNNNGG 4 cut(s) 605, 858, 1116, 1975
BsmAI GTCTC 4 cut(s) 1056, 1335, 1607, 1839
BsmFI GGGAC 2 cut(s) 1189, 1236
BsmI GAATGC 2 cut(s) 1285, 1907
BsnI GGCC 2 cut(s) 409, 1456
Bsp1286I GDGCHC 1 cut(s) 391
Bsp143I GATC 8 cut(s) 238, 281, 304, 532, 688, 1078, 1153, 2098
Bsp1720I GCTNAGC 1 cut(s) 1816
Bsp19I CCATGG 3 cut(s) 381, 1206, 1485
BspACI CCGC 4 cut(s) 97, 853, 855, 974
BspANI GGCC 2 cut(s) 409, 1456
BspCNI CTCAG 7 cut(s) 391, 655, 898, 1192, 1471, 1604, 1829
BspFNI CGCG 1 cut(s) 855
BspLI GGNNCC 3 cut(s) 831, 1491, 2212
BspMI ACCTGC 1 cut(s) 2182
BspOI GCTAGC 1 cut(s) 996
BspPI GGATC 2 cut(s) 246, 1086
BspT107I GGYRCC 1 cut(s) 2210
BsrBI CCGCTC 1 cut(s) 974
BsrDI GCAATG 2 cut(s) 191, 2138
BsrI ACTGG 4 cut(s) 595, 648, 926, 2109
BssECI CCNNGG 9 cut(s) 30, 381, 489, 490, 614, 826, 853, 1206, 1485
BssMI GATC 8 cut(s) 238, 281, 304, 532, 688, 1078, 1153, 2098
BssT1I CCWWGG 4 cut(s) 381, 614, 1206, 1485
Bst2UI CCWGG 4 cut(s) 491, 827, 1026, 1970
Bst4CI ACNGT 8 cut(s) 126, 427, 539, 865, 874, 1417, 1618, 2062
Bst6I CTCTTC 2 cut(s) 1486, 1922
BstAPI GCANNNNNTGC 1 cut(s) 1989
BstBAI YACGTR 1 cut(s) 2090
BstC8I GCNNGC 4 cut(s) 147, 258, 994, 1764
BstDEI CTNAG 8 cut(s) 399, 663, 906, 1179, 1458, 1591, 1816, 1865
BstDSI CCRYGG 4 cut(s) 381, 853, 1206, 1485
BstENI CCTNNNNNAGG 1 cut(s) 603
BstF5I GGATG 8 cut(s) 40, 377, 410, 1145, 1480, 1634, 1762, 1984
BstFNI CGCG 1 cut(s) 855
BstHHI GCGC 1 cut(s) 1746
BstKTI GATC 8 cut(s) 241, 284, 307, 535, 691, 1081, 1156, 2101
BstMAI GTCTC 4 cut(s) 1056, 1335, 1607, 1839
BstMBI GATC 8 cut(s) 238, 281, 304, 532, 688, 1078, 1153, 2098
BstMCI CGRYCG 1 cut(s) 30
BstMWI GCNNNNNNNGC 6 cut(s) 44, 257, 653, 1989, 1998, 2177
BstNI CCWGG 4 cut(s) 491, 827, 1026, 1970
BstNSI RCATGY 4 cut(s) 149, 354, 569, 1285
BstSCI CCNGG 4 cut(s) 489, 825, 1024, 1968
BstSFI CTRYAG 2 cut(s) 669, 1652
BstUI CGCG 1 cut(s) 855
BstV1I GCAGC 4 cut(s) 730, 752, 2122, 2158
BstV2I GAAGAC 2 cut(s) 552, 1194
BstX2I RGATCY 3 cut(s) 238, 1078, 1153
BstYI RGATCY 3 cut(s) 238, 1078, 1153
BsuI GTATCC 2 cut(s) 94, 2035
BsuRI GGCC 2 cut(s) 409, 1456
BtgI CCRYGG 4 cut(s) 381, 853, 1206, 1485
BtsCI GGATG 8 cut(s) 40, 377, 410, 1145, 1480, 1634, 1762, 1984
BtsI GCAGTG 2 cut(s) 1141, 1886
BtsIMutI CAGTG 7 cut(s) 396, 510, 588, 770, 1141, 1413, 1886
BveI ACCTGC 1 cut(s) 2182
Cac8I GCNNGC 4 cut(s) 147, 258, 994, 1764
CaiI CAGNNNCTG 1 cut(s) 1694
CfoI GCGC 1 cut(s) 1746
Cfr13I GGNCC 4 cut(s) 55, 830, 1005, 1454
Cfr42I CCGCGG 1 cut(s) 856
CseI GACGC 1 cut(s) 1333
Csp6I GTAC 3 cut(s) 768, 883, 2211
CviQI GTAC 3 cut(s) 768, 883, 2211
DdeI CTNAG 8 cut(s) 399, 663, 906, 1179, 1458, 1591, 1816, 1865
DpnI GATC 8 cut(s) 240, 283, 306, 534, 690, 1080, 1155, 2100
DpnII GATC 8 cut(s) 238, 281, 304, 532, 688, 1078, 1153, 2098
DriI GACNNNNNGTC 1 cut(s) 1327
EaeI YGGCCR 1 cut(s) 407
Eam1104I CTCTTC 2 cut(s) 1486, 1922
Eam1105I GACNNNNNGTC 1 cut(s) 1327
EarI CTCTTC 2 cut(s) 1486, 1922
Eco130I CCWWGG 4 cut(s) 381, 614, 1206, 1485
Eco32I GATATC 2 cut(s) 1783, 1862
Eco47I GGWCC 3 cut(s) 55, 830, 1005
Eco57I CTGAAG 1 cut(s) 1461
Eco72I CACGTG 1 cut(s) 2090
EcoNI CCTNNNNNAGG 1 cut(s) 603
EcoO109I RGGNCCY 1 cut(s) 830
EcoRI GAATTC 2 cut(s) 847, 938
EcoRII CCWGG 4 cut(s) 489, 825, 1024, 1968
EcoRV GATATC 2 cut(s) 1783, 1862
EcoT14I CCWWGG 4 cut(s) 381, 614, 1206, 1485
EcoT22I ATGCAT 2 cut(s) 379, 1287
ErhI CCWWGG 4 cut(s) 381, 614, 1206, 1485
FaqI GGGAC 2 cut(s) 1189, 1236
FauI CCCGC 3 cut(s) 90, 860, 967
FauNDI CATATG 3 cut(s) 264, 946, 1985
FbaI TGATCA 1 cut(s) 304
Fnu4HI GCNGC 5 cut(s) 741, 744, 856, 2136, 2172
FokI GGATG 8 cut(s) 47, 364, 417, 1152, 1487, 1621, 1769, 1991
Fsp4HI GCNGC 5 cut(s) 741, 744, 856, 2136, 2172
FspBI CTAG 6 cut(s) 197, 630, 968, 993, 1892, 2115
GlaI GCGC 1 cut(s) 1745
GluI GCNGC 5 cut(s) 741, 744, 856, 2136, 2172
GsaI CCCAGC 1 cut(s) 2005
GsuI CTGGAG 1 cut(s) 809
HaeIII GGCC 2 cut(s) 409, 1456
HapII CCGG 2 cut(s) 1436, 1624
HgaI GACGC 1 cut(s) 1333
HhaI GCGC 1 cut(s) 1746
Hin6I GCGC 1 cut(s) 1744
HinP1I GCGC 1 cut(s) 1744
HincII GTYRAC 3 cut(s) 67, 439, 1546
HindII GTYRAC 3 cut(s) 67, 439, 1546
HindIII AAGCTT 1 cut(s) 1443
HpaII CCGG 2 cut(s) 1436, 1624
HphI GGTGA 4 cut(s) 299, 797, 1817, 2108
Hpy166II GTNNAC 7 cut(s) 67, 439, 571, 768, 1546, 1621, 2087
Hpy188III TCNNGA 9 cut(s) 308, 603, 1043, 1181, 1348, 1786, 1921, 2072, 2197
Hpy8I GTNNAC 7 cut(s) 67, 439, 571, 768, 1546, 1621, 2087
HpyAV CCTTC 7 cut(s) 442, 609, 1026, 1216, 1600, 1838, 2060
HpyCH4III ACNGT 8 cut(s) 126, 427, 539, 865, 874, 1417, 1618, 2062
HpyCH4IV ACGT 1 cut(s) 2089
HpyF10VI GCNNNNNNNGC 6 cut(s) 44, 257, 653, 1989, 1998, 2177
HpyF3I CTNAG 8 cut(s) 399, 663, 906, 1179, 1458, 1591, 1816, 1865
HpySE526I ACGT 1 cut(s) 2089
HspAI GCGC 1 cut(s) 1744
KpnI GGTACC 1 cut(s) 2214
Ksp22I TGATCA 1 cut(s) 304
KspI CCGCGG 1 cut(s) 856
Kzo9I GATC 8 cut(s) 238, 281, 304, 532, 688, 1078, 1153, 2098
LmnI GCTCC 4 cut(s) 394, 971, 1120, 2163
Lsp1109I GCAGC 4 cut(s) 730, 752, 2122, 2158
LweI GCATC 3 cut(s) 25, 364, 386
MaeI CTAG 6 cut(s) 197, 630, 968, 993, 1892, 2115
MaeII ACGT 1 cut(s) 2089
MaeIII GTNAC 7 cut(s) 325, 421, 586, 838, 865, 2007, 2056
MalI GATC 8 cut(s) 240, 283, 306, 534, 690, 1080, 1155, 2100
MbiI CCGCTC 1 cut(s) 974
MboI GATC 8 cut(s) 238, 281, 304, 532, 688, 1078, 1153, 2098
MboII GAAGA 8 cut(s) 81, 557, 683, 1194, 1231, 1473, 1820, 1939
MflI RGATCY 3 cut(s) 238, 1078, 1153
MhlI GDGCHC 1 cut(s) 391
MlsI TGGCCA 1 cut(s) 409
MluNI TGGCCA 1 cut(s) 409
MlyI GAGTC 7 cut(s) 434, 594, 1171, 1208, 1472, 1841, 1873
MmeI TCCRAC 3 cut(s) 50, 942, 1173
Mox20I TGGCCA 1 cut(s) 409
Mph1103I ATGCAT 2 cut(s) 379, 1287
MroXI GAANNNNTTC 1 cut(s) 598
MscI TGGCCA 1 cut(s) 409
MseI TTAA 5 cut(s) 213, 243, 560, 804, 1737
MslI CAYNNNNRTG 1 cut(s) 1275
Msp20I TGGCCA 1 cut(s) 409
MspA1I CMGCKG 4 cut(s) 743, 855, 2001, 2135
MspI CCGG 2 cut(s) 1436, 1624
MspR9I CCNGG 4 cut(s) 491, 827, 1026, 1970
Mva1269I GAATGC 2 cut(s) 1285, 1907
MvaI CCWGG 4 cut(s) 491, 827, 1026, 1970
MvnI CGCG 1 cut(s) 855
MwoI GCNNNNNNNGC 6 cut(s) 44, 257, 653, 1989, 1998, 2177
NcoI CCATGG 3 cut(s) 381, 1206, 1485
NdeI CATATG 3 cut(s) 264, 946, 1985
NdeII GATC 8 cut(s) 238, 281, 304, 532, 688, 1078, 1153, 2098
NheI GCTAGC 1 cut(s) 992
NlaIV GGNNCC 3 cut(s) 831, 1491, 2212
NmuCI GTSAC 2 cut(s) 586, 838
NsiI ATGCAT 2 cut(s) 379, 1287
NspI RCATGY 4 cut(s) 149, 354, 569, 1285
PaeI GCATGC 1 cut(s) 149
PasI CCCWGGG 1 cut(s) 490
PciI ACATGT 1 cut(s) 565
PctI GAATGC 2 cut(s) 1285, 1907
PdmI GAANNNNTTC 1 cut(s) 598
PfeI GAWTC 3 cut(s) 959, 2043, 2129
PflMI CCANNNNNTGG 2 cut(s) 1116, 1975
PkrI GCNGC 5 cut(s) 742, 745, 857, 2137, 2173
PleI GAGTC 7 cut(s) 434, 593, 1171, 1207, 1472, 1840, 1873
PmaCI CACGTG 1 cut(s) 2090
PmlI CACGTG 1 cut(s) 2090
PpsI GAGTC 7 cut(s) 434, 593, 1171, 1207, 1472, 1840, 1873
Ppu21I YACGTR 1 cut(s) 2090
PpuMI RGGWCCY 1 cut(s) 830
PscI ACATGT 1 cut(s) 565
PsiI TTATAA 1 cut(s) 1796
Psp5II RGGWCCY 1 cut(s) 830
Psp6I CCWGG 4 cut(s) 489, 825, 1024, 1968
PspCI CACGTG 1 cut(s) 2090
PspFI CCCAGC 1 cut(s) 2001
PspGI CCWGG 4 cut(s) 489, 825, 1024, 1968
PspN4I GGNNCC 3 cut(s) 831, 1491, 2212
PspPI GGNCC 4 cut(s) 55, 830, 1005, 1454
PspPPI RGGWCCY 1 cut(s) 830
PstNI CAGNNNCTG 1 cut(s) 1694
PsuI RGATCY 3 cut(s) 238, 1078, 1153
PvuII CAGCTG 3 cut(s) 743, 2001, 2135
RsaI GTAC 3 cut(s) 769, 884, 2212
RsaNI GTAC 3 cut(s) 768, 883, 2211
RseI CAYNNNNRTG 1 cut(s) 1275
SacII CCGCGG 1 cut(s) 856
SaqAI TTAA 5 cut(s) 213, 243, 560, 804, 1737
SatI GCNGC 5 cut(s) 741, 744, 856, 2136, 2172
Sau3AI GATC 8 cut(s) 238, 281, 304, 532, 688, 1078, 1153, 2098
Sau96I GGNCC 4 cut(s) 55, 830, 1005, 1454
ScaI AGTACT 1 cut(s) 884
SchI GAGTC 7 cut(s) 434, 594, 1171, 1208, 1472, 1841, 1873
ScrFI CCNGG 4 cut(s) 491, 827, 1026, 1970
SduI GDGCHC 1 cut(s) 391
SfaNI GCATC 3 cut(s) 25, 364, 386
SfcI CTRYAG 2 cut(s) 669, 1652
Sfr303I CCGCGG 1 cut(s) 856
SgrBI CCGCGG 1 cut(s) 856
SinI GGWCC 3 cut(s) 55, 830, 1005
SmiMI CAYNNNNRTG 1 cut(s) 1275
SpeI ACTAGT 1 cut(s) 629
SphI GCATGC 1 cut(s) 149
SsiI CCGC 4 cut(s) 97, 853, 855, 974
SspMI CTAG 6 cut(s) 197, 630, 968, 993, 1892, 2115
StyD4I CCNGG 4 cut(s) 489, 825, 1024, 1968
StyI CCWWGG 4 cut(s) 381, 614, 1206, 1485
TaaI ACNGT 8 cut(s) 126, 427, 539, 865, 874, 1417, 1618, 2062
TaiI ACGT 1 cut(s) 2092
TaqI TCGA 2 cut(s) 1217, 1296
TaqII GACCGA 2 cut(s) 44, 1022
TatI WGTACW 1 cut(s) 882
TauI GCSGC 1 cut(s) 858
TfiI GAWTC 3 cut(s) 959, 2043, 2129
Tru1I TTAA 5 cut(s) 213, 243, 560, 804, 1737
Tru9I TTAA 5 cut(s) 213, 243, 560, 804, 1737
TscAI CASTG 7 cut(s) 403, 510, 595, 770, 1141, 1420, 1893
TseFI GTSAC 2 cut(s) 586, 838
TseI GCWGC 4 cut(s) 740, 743, 2135, 2171
Tsp45I GTSAC 2 cut(s) 586, 838
TspDTI ATGAA 6 cut(s) 281, 290, 639, 917, 1727, 1887
TspRI CASTG 7 cut(s) 403, 510, 595, 770, 1141, 1420, 1893
Van91I CCANNNNNTGG 2 cut(s) 1116, 1975
VpaK11BI GGWCC 3 cut(s) 55, 830, 1005
XagI CCTNNNNNAGG 1 cut(s) 603
XapI RAATTY 8 cut(s) 269, 517, 847, 938, 1029, 1099, 1242, 1521
XceI RCATGY 4 cut(s) 149, 354, 569, 1285
XcmI CCANNNNNNNNNTGG 2 cut(s) 1976, 2221
XmnI GAANNNNTTC 1 cut(s) 598
XspI CTAG 6 cut(s) 197, 630, 968, 993, 1892, 2115
ZrmI AGTACT 1 cut(s) 884
Zsp2I ATGCAT 2 cut(s) 379, 1287
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.