Prupe.2G028700_v2.0.a1

Belongs to the GRAS family

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
Physical Location & Seq
Forward (+)
2987915 .. 2990786
2872 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G028700.3

Sequence Viewer

Length: 1386 bp
ATGGCGCAAGAGGACGGGTCCCCAGTAACTTCATCACCCCTGCAGTTCTTTCCCTGGCTATCTCCTGGGATGGGATCTCCATACCCAACATGGCTCAGGGAGCTAAAATCTGAAGAGAGAGGTTTATATCTGATCCAGCTTCTTTATTCTTGTGCTAACCATGTCGCTTCTGGTAGCATTGAGAATGCAAATATTTGGCTTGACCATATTTCTCAGCTAGCCTCTCCTGATGGAGATACAATGCAGCGAATAGCTGCTTATTTCAATGAGGCACTTGCAGACCGGATGCTTAAAGCTTGGCCTGGTCTGTATAAAGCCCTTAACTCAACGAAAATAACATCAGTCTCAGAAGAAATTCTCGTTAAAAGGCTCTTCTGTGATCTATGTCCTTTCTTGAAGGTTGCGTACGTGGTTACAAATCAGGCCATAGTGGAAGCAATGGAAGGAGAAAAGATGGTTCATATTATTGATCTTCATTCATGTGAGCCTGCCCAATGGATTTATCTGATTCAGACATTAAATGCTCGACCTGAAGGCCCGCCTCATTTGAGAATTACGGGCATTCACGAACAGAAAGAGGTATTAGACCAAATGTTCCATCGCTTGACTGAAGAAGCAGGAAATCTGAACATCCCGTTTCAGTTCAATCCTATAGTTAGCAAGTTAGAGAACCTTGATATCGAAAGTTTGCGTGTCAAGACTGGAGAGGCTCTTGCAGTCTGCTCTGTATTGCAGCTACATTCTCTCTTGGCAGCTGATGATGATCTTAGGAGAAAATCACCATTAGCATCTAAGAACCTGCAGAAAGTCTTGCATATGAATAAACTCACTTTAGGAGAGTGGCTGGAGAAAGATCCAATCAGTGCATATAACCTAAGTCCTGATTCTGCATTGTCCCCACTATCAGGTGGTTCACCAAAGATGGGGAGTTTTTTAACTTCTCTTTGGGGCCTTTCACCAAAGCTAATGGTGATCACCGAGCAAGAATCAAACCACAATGGCCATACATTAATGGACAGGATCATGGAAGCATTGAACTTTTATGGAGCTCTTTTTGATTGCTTGGAGTCTACAGTACCGAGATCACCAATGGAGCGACAAAAGGTTGAGAAGATGCTTTTCGGAGAGGAAATAAAAAACATCATAGCATGTGAGGGAACCGAGAGAACAGAGAGGCATGAGAAGCTTGAGAAGTGGATTTTAAGGCTTGAGTTGGCTGGGTTTGGCAGGGTCCCTTTAAGCTACCACGGAATGTTACAGGCTAGGAGGCAGTTGCAGGGCTATGAAGGGTTTAAGATTAAAGAAGAAAATGGATGTTTAGTTATTTGTTGGCATGACAGGCCGCTTTTTTCAATATCGGCCTGGAGGTTTAGGAGATACGAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

462

Amino Acids

52.32

Weight (kDa)

5.92

Isoelectric Point (pI)

56.98

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 807
AccI GTMKAC 1 cut(s) 1070
AciI CCGC 2 cut(s) 539, 1343
AclWI GGATC 4 cut(s) 82, 127, 848, 1028
AcoI YGGCCR 1 cut(s) 1000
AcsI RAATTY 1 cut(s) 354
AcuI CTGAAG 3 cut(s) 132, 552, 630
AfaI GTAC 2 cut(s) 407, 1077
AfiI CCNNNNNNNGG 3 cut(s) 71, 905, 923
AgsI TTSAA 5 cut(s) 265, 397, 646, 1036, 1353
AjnI CCWGG 4 cut(s) 53, 64, 301, 1361
Alw21I GWGCWC 1 cut(s) 1051
Alw26I GTCTC 1 cut(s) 349
AlwI GGATC 4 cut(s) 82, 127, 848, 1028
AoxI GGCC 7 cut(s) 299, 423, 535, 949, 1000, 1340, 1359
ApeKI GCWGC 4 cut(s) 244, 254, 733, 752
ApoI RAATTY 1 cut(s) 354
AseI ATTAAT 1 cut(s) 1010
Asp700I GAANNNNTTC 1 cut(s) 354
AspLEI GCGC 1 cut(s) 7
AspS9I GGNCC 4 cut(s) 18, 536, 949, 1231
AsuHPI GGTGA 7 cut(s) 27, 771, 906, 948, 967, 982, 1077
AsuNHI GCTAGC 1 cut(s) 217
AvaII GGWCC 2 cut(s) 18, 1231
BalI TGGCCA 1 cut(s) 1002
BanII GRGCYC 1 cut(s) 1051
BarI GAAGNNNNNNTAC 2 cut(s) 389, 421
Bbv12I GWGCWC 1 cut(s) 1051
BbvI GCAGC 4 cut(s) 241, 256, 745, 764
BccI CCATC 5 cut(s) 64, 224, 448, 606, 916
BciT130I CCWGG 4 cut(s) 55, 66, 303, 1363
BclI TGATCA 1 cut(s) 972
BcoDI GTCTC 1 cut(s) 349
BfaI CTAG 2 cut(s) 218, 1263
BfmI CTRYAG 4 cut(s) 41, 651, 800, 1071
BfuAI ACCTGC 1 cut(s) 807
BisI GCNGC 5 cut(s) 245, 255, 734, 753, 1343
BlsI GCNGC 5 cut(s) 246, 256, 735, 754, 1344
Bme1390I CCNGG 4 cut(s) 55, 66, 303, 1363
Bme18I GGWCC 2 cut(s) 18, 1231
BmgT120I GGNCC 4 cut(s) 18, 536, 949, 1231
BmiI GGNNCC 6 cut(s) 19, 20, 950, 1159, 1232, 1233
BmrFI CCNGG 4 cut(s) 55, 66, 303, 1363
BmrI ACTGGG 1 cut(s) 17
BmsI GCATC 3 cut(s) 276, 797, 1104
BmtI GCTAGC 1 cut(s) 221
BmuI ACTGGG 1 cut(s) 17
BpmI CTGGAG 3 cut(s) 723, 866, 1384
Bpu10I CCTNAGC 1 cut(s) 95
BpuEI CTTGAG 2 cut(s) 1208, 1229
BsaAI YACGTR 1 cut(s) 409
BsaBI GATNNNNATC 1 cut(s) 762
BsaJI CCNNGG 3 cut(s) 53, 65, 1246
BsaWI WCCGGW 1 cut(s) 282
Bsc4I CCNNNNNNNGG 3 cut(s) 71, 905, 923
Bse1I ACTGG 2 cut(s) 23, 706
Bse3DI GCAATG 1 cut(s) 444
Bse8I GATNNNNATC 1 cut(s) 762
BseBI CCWGG 4 cut(s) 55, 66, 303, 1363
BseDI CCNNGG 3 cut(s) 53, 65, 1246
BseGI GGATG 4 cut(s) 75, 291, 630, 1319
BseJI GATNNNNATC 1 cut(s) 762
BseLI CCNNNNNNNGG 3 cut(s) 71, 905, 923
BseMI GCAATG 1 cut(s) 444
BseMII CTCAG 3 cut(s) 109, 227, 360
BseNI ACTGG 2 cut(s) 23, 706
BseXI GCAGC 4 cut(s) 241, 256, 745, 764
BseYI CCCAGC 1 cut(s) 1217
BshFI GGCC 7 cut(s) 301, 425, 537, 951, 1002, 1342, 1361
BsiHKAI GWGCWC 1 cut(s) 1051
BsiSI CCGG 1 cut(s) 283
BsiWI CGTACG 1 cut(s) 405
BslFI GGGAC 3 cut(s) 4, 880, 1217
BslI CCNNNNNNNGG 3 cut(s) 71, 905, 923
BsmAI GTCTC 1 cut(s) 349
BsmFI GGGAC 3 cut(s) 4, 880, 1217
BsmI GAATGC 2 cut(s) 190, 561
BsnI GGCC 7 cut(s) 301, 425, 537, 951, 1002, 1342, 1361
Bsp1286I GDGCHC 1 cut(s) 1051
Bsp143I GATC 9 cut(s) 74, 132, 379, 469, 763, 853, 972, 1020, 1082
BspACI CCGC 2 cut(s) 539, 1343
BspANI GGCC 7 cut(s) 301, 425, 537, 951, 1002, 1342, 1361
BspCNI CTCAG 3 cut(s) 108, 226, 359
BspLI GGNNCC 6 cut(s) 19, 20, 950, 1159, 1232, 1233
BspMAI CTGCAG 2 cut(s) 45, 804
BspMI ACCTGC 1 cut(s) 807
BspOI GCTAGC 1 cut(s) 221
BspPI GGATC 4 cut(s) 82, 127, 848, 1028
BspQI GCTCTTC 1 cut(s) 377
BsrDI GCAATG 1 cut(s) 444
BsrI ACTGG 2 cut(s) 23, 706
BssECI CCNNGG 3 cut(s) 53, 65, 1246
BssMI GATC 9 cut(s) 74, 132, 379, 469, 763, 853, 972, 1020, 1082
Bst2UI CCWGG 4 cut(s) 55, 66, 303, 1363
Bst4CI ACNGT 1 cut(s) 1075
Bst6I CTCTTC 2 cut(s) 108, 377
BstBAI YACGTR 1 cut(s) 409
BstC8I GCNNGC 3 cut(s) 219, 489, 539
BstDEI CTNAG 6 cut(s) 95, 213, 346, 767, 792, 875
BstDSI CCRYGG 1 cut(s) 1246
BstF5I GGATG 4 cut(s) 75, 291, 630, 1319
BstHHI GCGC 1 cut(s) 7
BstKTI GATC 9 cut(s) 77, 135, 382, 472, 766, 856, 975, 1023, 1085
BstMAI GTCTC 1 cut(s) 349
BstMBI GATC 9 cut(s) 74, 132, 379, 469, 763, 853, 972, 1020, 1082
BstMWI GCNNNNNNNGC 3 cut(s) 100, 1183, 1339
BstNI CCWGG 4 cut(s) 55, 66, 303, 1363
BstNSI RCATGY 1 cut(s) 1152
BstSCI CCNGG 4 cut(s) 53, 64, 301, 1361
BstSFI CTRYAG 4 cut(s) 41, 651, 800, 1071
BstV1I GCAGC 4 cut(s) 241, 256, 745, 764
BstX2I RGATCY 2 cut(s) 74, 853
BstYI RGATCY 2 cut(s) 74, 853
BsuRI GGCC 7 cut(s) 301, 425, 537, 951, 1002, 1342, 1361
BtgI CCRYGG 1 cut(s) 1246
BtgZI GCGATG 1 cut(s) 584
BtsCI GGATG 4 cut(s) 75, 291, 630, 1319
BtsIMutI CAGTG 1 cut(s) 868
BveI ACCTGC 1 cut(s) 807
Cac8I GCNNGC 3 cut(s) 219, 489, 539
CfoI GCGC 1 cut(s) 7
Cfr13I GGNCC 4 cut(s) 18, 536, 949, 1231
Csp6I GTAC 2 cut(s) 406, 1076
CviAII CATG 7 cut(s) 90, 161, 480, 1024, 1149, 1178, 1334
CviQI GTAC 2 cut(s) 406, 1076
DdeI CTNAG 6 cut(s) 95, 213, 346, 767, 792, 875
DpnI GATC 9 cut(s) 76, 134, 381, 471, 765, 855, 974, 1022, 1084
DpnII GATC 9 cut(s) 74, 132, 379, 469, 763, 853, 972, 1020, 1082
EaeI YGGCCR 1 cut(s) 1000
Eam1104I CTCTTC 2 cut(s) 108, 377
EarI CTCTTC 2 cut(s) 108, 377
Ecl136II GAGCTC 1 cut(s) 1049
Eco24I GRGCYC 1 cut(s) 1051
Eco32I GATATC 1 cut(s) 679
Eco47I GGWCC 2 cut(s) 18, 1231
Eco53kI GAGCTC 1 cut(s) 1049
Eco57I CTGAAG 3 cut(s) 132, 552, 630
EcoICRI GAGCTC 1 cut(s) 1049
EcoO109I RGGNCCY 3 cut(s) 18, 949, 1231
EcoRII CCWGG 4 cut(s) 53, 64, 301, 1361
EcoRV GATATC 1 cut(s) 679
EcoT38I GRGCYC 1 cut(s) 1051
FaeI CATG 7 cut(s) 93, 164, 483, 1027, 1152, 1181, 1337
FaqI GGGAC 3 cut(s) 4, 880, 1217
FatI CATG 7 cut(s) 89, 160, 479, 1023, 1148, 1177, 1333
FauI CCCGC 1 cut(s) 546
FauNDI CATATG 1 cut(s) 816
FbaI TGATCA 1 cut(s) 972
FblI GTMKAC 1 cut(s) 1070
Fnu4HI GCNGC 5 cut(s) 245, 255, 734, 753, 1343
FokI GGATG 4 cut(s) 82, 298, 617, 1326
FriOI GRGCYC 1 cut(s) 1051
Fsp4HI GCNGC 5 cut(s) 245, 255, 734, 753, 1343
FspBI CTAG 2 cut(s) 218, 1263
GlaI GCGC 1 cut(s) 6
GluI GCNGC 5 cut(s) 245, 255, 734, 753, 1343
GsaI CCCAGC 1 cut(s) 1221
GsuI CTGGAG 3 cut(s) 723, 866, 1384
HaeIII GGCC 7 cut(s) 301, 425, 537, 951, 1002, 1342, 1361
HapII CCGG 1 cut(s) 283
HhaI GCGC 1 cut(s) 7
Hin1II CATG 7 cut(s) 93, 164, 483, 1027, 1152, 1181, 1337
Hin6I GCGC 1 cut(s) 5
HinP1I GCGC 1 cut(s) 5
HindIII AAGCTT 2 cut(s) 294, 1184
HinfI GANTC 4 cut(s) 508, 884, 986, 1067
HpaII CCGG 1 cut(s) 283
HphI GGTGA 7 cut(s) 27, 771, 906, 948, 967, 982, 1077
Hpy166II GTNNAC 2 cut(s) 914, 1071
Hpy188I TCNGA 7 cut(s) 112, 132, 349, 507, 513, 627, 1124
Hpy188III TCNNGA 5 cut(s) 227, 394, 566, 697, 881
Hpy8I GTNNAC 2 cut(s) 914, 1071
HpyAV CCTTC 4 cut(s) 391, 437, 527, 1280
HpyCH4III ACNGT 1 cut(s) 1075
HpyCH4IV ACGT 1 cut(s) 408
HpyF10VI GCNNNNNNNGC 3 cut(s) 100, 1183, 1339
HpyF3I CTNAG 6 cut(s) 95, 213, 346, 767, 792, 875
HpySE526I ACGT 1 cut(s) 408
Hsp92II CATG 7 cut(s) 93, 164, 483, 1027, 1152, 1181, 1337
HspAI GCGC 1 cut(s) 5
KflI GGGWCCC 2 cut(s) 18, 1231
Ksp22I TGATCA 1 cut(s) 972
Kzo9I GATC 9 cut(s) 74, 132, 379, 469, 763, 853, 972, 1020, 1082
LguI GCTCTTC 1 cut(s) 377
LmnI GCTCC 3 cut(s) 100, 1046, 1093
Lsp1109I GCAGC 4 cut(s) 241, 256, 745, 764
LweI GCATC 3 cut(s) 276, 797, 1104
MaeI CTAG 2 cut(s) 218, 1263
MaeII ACGT 1 cut(s) 408
MaeIII GTNAC 3 cut(s) 25, 412, 1254
MalI GATC 9 cut(s) 76, 134, 381, 471, 765, 855, 974, 1022, 1084
MboI GATC 9 cut(s) 74, 132, 379, 469, 763, 853, 972, 1020, 1082
MboII GAAGA 7 cut(s) 125, 362, 364, 464, 623, 1123, 1316
MflI RGATCY 2 cut(s) 74, 853
MhlI GDGCHC 1 cut(s) 1051
MlsI TGGCCA 1 cut(s) 1002
MluCI AATT 2 cut(s) 354, 552
MluNI TGGCCA 1 cut(s) 1002
MlyI GAGTC 1 cut(s) 1076
Mox20I TGGCCA 1 cut(s) 1002
MroXI GAANNNNTTC 1 cut(s) 354
MscI TGGCCA 1 cut(s) 1002
MslI CAYNNNNRTG 1 cut(s) 480
Msp20I TGGCCA 1 cut(s) 1002
MspA1I CMGCKG 1 cut(s) 755
MspI CCGG 1 cut(s) 283
MspR9I CCNGG 4 cut(s) 55, 66, 303, 1363
Mva1269I GAATGC 2 cut(s) 190, 561
MvaI CCWGG 4 cut(s) 55, 66, 303, 1363
MwoI GCNNNNNNNGC 3 cut(s) 100, 1183, 1339
NdeI CATATG 1 cut(s) 816
NdeII GATC 9 cut(s) 74, 132, 379, 469, 763, 853, 972, 1020, 1082
NheI GCTAGC 1 cut(s) 217
NlaIII CATG 7 cut(s) 93, 164, 483, 1027, 1152, 1181, 1337
NlaIV GGNNCC 6 cut(s) 19, 20, 950, 1159, 1232, 1233
NspI RCATGY 1 cut(s) 1152
PciSI GCTCTTC 1 cut(s) 377
PctI GAATGC 2 cut(s) 190, 561
PdmI GAANNNNTTC 1 cut(s) 354
PfeI GAWTC 3 cut(s) 508, 884, 986
Pfl23II CGTACG 1 cut(s) 405
PkrI GCNGC 5 cut(s) 246, 256, 735, 754, 1344
PleI GAGTC 1 cut(s) 1075
PpsI GAGTC 1 cut(s) 1075
Ppu21I YACGTR 1 cut(s) 409
PpuMI RGGWCCY 2 cut(s) 18, 1231
PshBI ATTAAT 1 cut(s) 1010
Psp124BI GAGCTC 1 cut(s) 1051
Psp5II RGGWCCY 2 cut(s) 18, 1231
Psp6I CCWGG 4 cut(s) 53, 64, 301, 1361
PspFI CCCAGC 1 cut(s) 1217
PspGI CCWGG 4 cut(s) 53, 64, 301, 1361
PspLI CGTACG 1 cut(s) 405
PspN4I GGNNCC 6 cut(s) 19, 20, 950, 1159, 1232, 1233
PspPI GGNCC 4 cut(s) 18, 536, 949, 1231
PspPPI RGGWCCY 2 cut(s) 18, 1231
PstI CTGCAG 2 cut(s) 45, 804
PsuI RGATCY 2 cut(s) 74, 853
PvuII CAGCTG 1 cut(s) 755
RsaI GTAC 2 cut(s) 407, 1077
RsaNI GTAC 2 cut(s) 406, 1076
RseI CAYNNNNRTG 1 cut(s) 480
SacI GAGCTC 1 cut(s) 1051
SapI GCTCTTC 1 cut(s) 377
SatI GCNGC 5 cut(s) 245, 255, 734, 753, 1343
Sau3AI GATC 9 cut(s) 74, 132, 379, 469, 763, 853, 972, 1020, 1082
Sau96I GGNCC 4 cut(s) 18, 536, 949, 1231
SchI GAGTC 1 cut(s) 1076
ScrFI CCNGG 4 cut(s) 55, 66, 303, 1363
SduI GDGCHC 1 cut(s) 1051
SfaNI GCATC 3 cut(s) 276, 797, 1104
SfcI CTRYAG 4 cut(s) 41, 651, 800, 1071
SinI GGWCC 2 cut(s) 18, 1231
SmiMI CAYNNNNRTG 1 cut(s) 480
SmlI CTYRAG 2 cut(s) 1187, 1208
SmoI CTYRAG 2 cut(s) 1187, 1208
Sse9I AATT 2 cut(s) 354, 552
SsiI CCGC 2 cut(s) 539, 1343
SspI AATATT 1 cut(s) 193
SspMI CTAG 2 cut(s) 218, 1263
SstI GAGCTC 1 cut(s) 1051
StyD4I CCNGG 4 cut(s) 53, 64, 301, 1361
TaaI ACNGT 1 cut(s) 1075
TaiI ACGT 1 cut(s) 411
TaqI TCGA 2 cut(s) 526, 681
TasI AATT 2 cut(s) 354, 552
TauI GCSGC 1 cut(s) 1345
TfiI GAWTC 3 cut(s) 508, 884, 986
TscAI CASTG 1 cut(s) 868
TseI GCWGC 4 cut(s) 244, 254, 733, 752
TspDTI ATGAA 6 cut(s) 21, 449, 464, 468, 833, 1299
TspGWI ACGGA 1 cut(s) 1263
TspRI CASTG 1 cut(s) 868
VpaK11BI GGWCC 2 cut(s) 18, 1231
VspI ATTAAT 1 cut(s) 1010
XapI RAATTY 1 cut(s) 354
XceI RCATGY 1 cut(s) 1152
XcmI CCANNNNNNNNNTGG 2 cut(s) 87, 167
XmiI GTMKAC 1 cut(s) 1070
XmnI GAANNNNTTC 1 cut(s) 354
XspI CTAG 2 cut(s) 218, 1263
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.