Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr3

Orthogroup ID

OG0002137

Physical Location & Seq

Genomic Coordinates Forward (+)

13186674 .. 13188098

Gene Structure 1425 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom03g12560.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1425 bp

ATGGCACCAATGTTTCAAGACGAAGGGTCGTCGTCTGCAACTTCATCTCCTCTCCAATGCTTTTCCATGATTTCGCTTTCACCTAGTTTAGGCTCACCATACCCTTGGCTTAAAGAACTCAAATCCGAGGACCGCGGTTTGTATTTGATCCACTTGTTGCTCACTTGTGCAAACCATGTTGCCACCGGAAGCCTTGAAAATGCAAATGTCGCCCTTGAGCAAATCTCCCAACTCGCCGCTGCTGACGGTGATACCATGCAGCGGATTGCTGCCTACTTCACCGAGGCTCTTGCTGATCGAATCCTCAAAGCTTGGCCCGGTCTTCACAGGGCACTGAATTCCACTAAAATATCTTTGGTTTCAGATGAAATTCTAGTTCGGAAAGTGTTTTTCGAGATGCTTCCCTTCCTAAAGGTGGCTTTTGTGCTCACAAACCAAGCTATTATGGAAGCCATGGAAGGGGAAAAGATGGTGCATATAATCGATCTTAATGCAGCTGAACCTGTTCAGTGGATTACTCTTCTTCAAGTTTTAAGTGCAAGACCTGAAGGTCCGCCTCATTTGAGAATCACCGGTGTTCATCAACAGAAAGAGGTACTGGATCAAATGGCTCATAGGTTGACTGAGGAAGCCGAAAAATTGGATATCCCATTTCAGTTCTGTCCCATAATCAGCAAATTGGAAAATCTCGATATGGACAAACTTCGTGTCAAAACTGGCGAGGCTCTAGCTATCAGCTCAGTTCTCCAGTTGCACTCCCTTTTGGCGTCGGATGATGGACTCCTGAAAAAGAAGTCCCCATTAGCATCAAGGGGTTCAAATGGAAATCACTTGCCAAGAGCATTGCAAATGAGCCAAGGCACATTGGGTGAGTTGCTAGAGAAAGAGATGGGTAACGGGTATAGCCCGAGTCCTGATTCAACCTCGTCATCACCGCTATCTTTAACTCCTTCGGCGAAATTGGATAGCTTTCTTAATGCATTTTGGGGTTTGACTCCGAAGGTTATGGTACTAACCGAGCAAGATTCTAACCATAATGGATCCACTCTGATGGAGAGACTATTGGAATCTCTGTACTCGTATGCTGCATTGTTTGATTGCTTGGAATCTACGATGTCGAGAACCTCATTGGAGAGACTGAAGGTGGAGAAAATGCTGTTTGGGGAAGAGATAAAAAACATTATAGCTTGCGAGGGATCTGAGAGGACCGAAAGACATGAAAAGCTTGAGAAATGGATTCAAAGGCTTGATTTAGCTGGCTTTGGAAATATGCCTTTGAGCTATTACGGAATGCTGCAGGCAAAGAGGATGTTGCAGAGCTATGGTTGCGACGGGTATAGAATGAGGGAAGAGAACGGTTGTGTGTTGATTTCCTGGCAAGATCGACCGCTGTTTTCGGTGTCAGCTTGGAGGTGCAGGAAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0008150 GO:0009719 GO:0009725 GO:0009739 GO:0009889 GO:0010033 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0033993 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044424 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0097159 GO:0140110 GO:1901363 GO:1901700 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

GRAS

Protein Analysis

475

Amino Acids

52.89

Weight (kDa)

5.75

Isoelectric Point (pI)

43.67

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GRAS	PF03514	49 - 471	4.5e-121	GRAS domain family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002137)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G50420
fragaria_vesca	FvH4_7g02290 FvH4_7g02290
malus_domestica	MD02G1295800.v1.1 MD07G1030000.v1.1 MD11G1196300.v1.1
prunus_persica	Prupe.2G028700_v2.0.a1 Prupe.2G028700_v2.0.a1 Prupe.2G028700_v2.0.a1 Prupe.2G028700_v2.0.a1 Prupe.2G028700_v2.0.a1 Prupe.2G028700_v2.0.a1 Prupe.2G028700_v2.0.a1 Prupe.2G028700_v2.0.a1 Prupe.2G028700_v2.0.a1 Prupe.2G028700_v2.0.a1 Prupe.4G258200_v2.0.a1
pyrus_communis	pycom02g24850 pycom03g12560 pycom07g02200 pycom11g16370
rosa_chinensis	RchiOBHm_Chr1g0319641 RchiOBHm_Chr5g0050921
rosa_laevigata	RLG00000030469 RLG00000034747
rosa_multiflora	Rmu_sc0002539.1_g000095 Rmu_sc0004572.1_g000002 Rmu_sc0017334.1_g000002
rosa_roxburghii	Rroxscaffold_1G00029800
rosa_rugosa	Rorug01G0028900 Rorug01G0029000 Rorug01G0029100 Rorug05G0293900
rosa_samantha	Rh1AG040700 Rh1BG037900 Rh1CG041800 Rh1DG028100 Rh5AG337000 Rh5BG346600 Rh5DG359600
rosa_wichuraiana	Rw0G019990 Rw1G003380 Rw5G031800 Rw5G031860

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	549
AccB1I	GGYRCC	1 cut(s)	4
AccII	CGCG	1 cut(s)	135
AciI	CCGC	7 cut(s)	133, 135, 237, 262, 554, 935, 1388
AclWI	GGATC	5 cut(s)	142, 609, 1035, 1048, 1204
AcsI	RAATTY	2 cut(s)	337, 369
AcuI	CTGAAG	2 cut(s)	567, 1160
AcyI	GRCGYC	1 cut(s)	767
AfaI	GTAC	3 cut(s)	597, 1011, 1076
AfiI	CCNNNNNNNGG	4 cut(s)	89, 261, 415, 459
AgeI	ACCGGT	1 cut(s)	572
AgsI	TTSAA	6 cut(s)	17, 197, 527, 819, 921, 1241
AhdI	GACNNNNNGTC	1 cut(s)	25
AjnI	CCWGG	1 cut(s)	1373
Alw21I	GWGCWC	1 cut(s)	429
Alw26I	GTCTC	2 cut(s)	1051, 1129
AlwI	GGATC	5 cut(s)	142, 609, 1035, 1048, 1204
Ama87I	CYCGRG	1 cut(s)	907
AoxI	GGCC	1 cut(s)	314
ApeKI	GCWGC	6 cut(s)	239, 259, 269, 494, 1085, 1294
ApoI	RAATTY	2 cut(s)	337, 369
ArsI	GACNNNNNNTTYG	2 cut(s)	693, 725
AsiGI	ACCGGT	1 cut(s)	572
Asp700I	GAANNNNTTC	1 cut(s)	504
AspS9I	GGNCC	4 cut(s)	130, 315, 551, 1206
AsuC2I	CCSGG	1 cut(s)	318
AsuHPI	GGTGA	7 cut(s)	72, 87, 260, 271, 562, 881, 924
AvaI	CYCGRG	1 cut(s)	907
AvaII	GGWCC	3 cut(s)	130, 551, 1206
BaeGI	GKGCMC	1 cut(s)	334
BamHI	GGATCC	1 cut(s)	1040
BanI	GGYRCC	1 cut(s)	4
BbsI	GAAGAC	1 cut(s)	314
Bbv12I	GWGCWC	1 cut(s)	429
BbvI	GCAGC	6 cut(s)	226, 256, 271, 506, 1072, 1281
BccI	CCATC	4 cut(s)	463, 770, 883, 1045
BcgI	CGANNNNNNTGC	4 cut(s)	272, 306, 473, 507
BciT130I	CCWGG	1 cut(s)	1375
BcnI	CCSGG	1 cut(s)	318
BcoDI	GTCTC	2 cut(s)	1051, 1129
BfaI	CTAG	4 cut(s)	84, 374, 728, 878
BfmI	CTRYAG	1 cut(s)	1295
BisI	GCNGC	7 cut(s)	237, 240, 260, 270, 495, 1086, 1295
BlsI	GCNGC	7 cut(s)	238, 241, 261, 271, 496, 1087, 1296
Bme1390I	CCNGG	2 cut(s)	318, 1375
Bme18I	GGWCC	3 cut(s)	130, 551, 1206
BmeRI	GACNNNNNGTC	1 cut(s)	25
BmeT110I	CYCGRG	1 cut(s)	907
BmgT120I	GGNCC	4 cut(s)	130, 315, 551, 1206
BmiI	GGNNCC	2 cut(s)	6, 1042
BmrFI	CCNGG	2 cut(s)	318, 1375
BmsI	GCATC	2 cut(s)	387, 815
BpiI	GAAGAC	1 cut(s)	314
BplI	GAGNNNNNCTC	2 cut(s)	209, 241
BpmI	CTGGAG	1 cut(s)	731
BpuEI	CTTGAG	2 cut(s)	236, 1247
BpuMI	CCSGG	1 cut(s)	318
Bsa29I	ATCGAT	1 cut(s)	483
BsaHI	GRCGYC	1 cut(s)	767
BsaJI	CCNNGG	6 cut(s)	104, 126, 133, 282, 453, 856
BsaWI	WCCGGW	2 cut(s)	185, 572
BsaXI	ACNNNNNCTCC	2 cut(s)	31, 61
Bsc4I	CCNNNNNNNGG	4 cut(s)	89, 261, 415, 459
Bse118I	RCCGGY	1 cut(s)	572
Bse1I	ACTGG	3 cut(s)	603, 721, 748
Bse3DI	GCAATG	1 cut(s)	842
BseBI	CCWGG	1 cut(s)	1375
BseCI	ATCGAT	1 cut(s)	483
BseDI	CCNNGG	6 cut(s)	104, 126, 133, 282, 453, 856
BseGI	GGATG	2 cut(s)	778, 1314
BseLI	CCNNNNNNNGG	4 cut(s)	89, 261, 415, 459
BseMI	GCAATG	1 cut(s)	842
BseMII	CTCAG	3 cut(s)	615, 753, 1191
BseNI	ACTGG	3 cut(s)	603, 721, 748
BseRI	GAGGAG	1 cut(s)	39
BseSI	GKGCMC	1 cut(s)	334
BseXI	GCAGC	6 cut(s)	226, 256, 271, 506, 1072, 1281
Bsh1236I	CGCG	1 cut(s)	135
Bsh1285I	CGRYCG	1 cut(s)	1388
BshFI	GGCC	1 cut(s)	316
BshNI	GGYRCC	1 cut(s)	4
BshTI	ACCGGT	1 cut(s)	572
BshVI	ATCGAT	1 cut(s)	483
BsiEI	CGRYCG	1 cut(s)	1388
BsiHKAI	GWGCWC	1 cut(s)	429
BsiHKCI	CYCGRG	1 cut(s)	907
BsiSI	CCGG	3 cut(s)	186, 318, 573
BslFI	GGGAC	2 cut(s)	648, 781
BslI	CCNNNNNNNGG	4 cut(s)	89, 261, 415, 459
BsmAI	GTCTC	2 cut(s)	1051, 1129
BsmFI	GGGAC	2 cut(s)	648, 781
BsmI	GAATGC	1 cut(s)	1296
BsnI	GGCC	1 cut(s)	316
BsoBI	CYCGRG	1 cut(s)	907
Bsp1286I	GDGCHC	2 cut(s)	334, 429
Bsp143I	GATC	7 cut(s)	147, 295, 484, 601, 1040, 1196, 1381
Bsp19I	CCATGG	1 cut(s)	453
BspACI	CCGC	7 cut(s)	133, 135, 237, 262, 554, 935, 1388
BspANI	GGCC	1 cut(s)	316
BspCNI	CTCAG	3 cut(s)	616, 752, 1192
BspDI	ATCGAT	1 cut(s)	483
BspFNI	CGCG	1 cut(s)	135
BspLI	GGNNCC	2 cut(s)	6, 1042
BspMAI	CTGCAG	1 cut(s)	1299
BspPI	GGATC	5 cut(s)	142, 609, 1035, 1048, 1204
BspT107I	GGYRCC	1 cut(s)	4
BsrDI	GCAATG	1 cut(s)	842
BsrFI	RCCGGY	1 cut(s)	572
BsrI	ACTGG	3 cut(s)	603, 721, 748
BssAI	RCCGGY	1 cut(s)	572
BssECI	CCNNGG	6 cut(s)	104, 126, 133, 282, 453, 856
BssMI	GATC	7 cut(s)	147, 295, 484, 601, 1040, 1196, 1381
BssNI	GRCGYC	1 cut(s)	767
BssT1I	CCWWGG	3 cut(s)	104, 453, 856
Bst2UI	CCWGG	1 cut(s)	1375
Bst4CI	ACNGT	2 cut(s)	248, 1358
Bst6I	CTCTTC	3 cut(s)	525, 1161, 1344
BstACI	GRCGYC	1 cut(s)	767
BstC8I	GCNNGC	3 cut(s)	1189, 1258, 1299
BstDEI	CTNAG	3 cut(s)	624, 739, 1200
BstDSI	CCRYGG	2 cut(s)	133, 453
BstENI	CCTNNNNNAGG	1 cut(s)	87
BstF5I	GGATG	2 cut(s)	778, 1314
BstFNI	CGCG	1 cut(s)	135
BstKTI	GATC	7 cut(s)	150, 298, 487, 604, 1043, 1199, 1384
BstMAI	GTCTC	2 cut(s)	1051, 1129
BstMBI	GATC	7 cut(s)	147, 295, 484, 601, 1040, 1196, 1381
BstMCI	CGRYCG	1 cut(s)	1388
BstMWI	GCNNNNNNNGC	2 cut(s)	209, 1326
BstNI	CCWGG	1 cut(s)	1375
BstSCI	CCNGG	2 cut(s)	316, 1373
BstSFI	CTRYAG	1 cut(s)	1295
BstSLI	GKGCMC	1 cut(s)	334
BstUI	CGCG	1 cut(s)	135
BstV1I	GCAGC	6 cut(s)	226, 256, 271, 506, 1072, 1281
BstV2I	GAAGAC	1 cut(s)	314
BstX2I	RGATCY	2 cut(s)	1040, 1196
BstXI	CCANNNNNNTGG	2 cut(s)	105, 1051
BstYI	RGATCY	2 cut(s)	1040, 1196
Bsu15I	ATCGAT	1 cut(s)	483
BsuRI	GGCC	1 cut(s)	316
BsuTUI	ATCGAT	1 cut(s)	483
BtgI	CCRYGG	2 cut(s)	133, 453
BtsCI	GGATG	2 cut(s)	778, 1314
BtsIMutI	CAGTG	2 cut(s)	332, 515
Cac8I	GCNNGC	3 cut(s)	1189, 1258, 1299
Cfr10I	RCCGGY	1 cut(s)	572
Cfr13I	GGNCC	4 cut(s)	130, 315, 551, 1206
Cfr42I	CCGCGG	1 cut(s)	136
ClaI	ATCGAT	1 cut(s)	483
CseI	GACGC	1 cut(s)	756
Csp6I	GTAC	3 cut(s)	596, 1010, 1075
CspAI	ACCGGT	1 cut(s)	572
CviAII	CATG	5 cut(s)	67, 176, 256, 454, 1217
CviQI	GTAC	3 cut(s)	596, 1010, 1075
DdeI	CTNAG	3 cut(s)	624, 739, 1200
DpnI	GATC	7 cut(s)	149, 297, 486, 603, 1042, 1198, 1383
DpnII	GATC	7 cut(s)	147, 295, 484, 601, 1040, 1196, 1381
DrdI	GACNNNNNNGTC	1 cut(s)	549
DriI	GACNNNNNGTC	1 cut(s)	25
DseDI	GACNNNNNNGTC	1 cut(s)	549
Eam1104I	CTCTTC	3 cut(s)	525, 1161, 1344
Eam1105I	GACNNNNNGTC	1 cut(s)	25
EarI	CTCTTC	3 cut(s)	525, 1161, 1344
EciI	GGCGGA	1 cut(s)	543
Eco130I	CCWWGG	3 cut(s)	104, 453, 856
Eco32I	GATATC	1 cut(s)	646
Eco47I	GGWCC	3 cut(s)	130, 551, 1206
Eco57I	CTGAAG	2 cut(s)	567, 1160
Eco88I	CYCGRG	1 cut(s)	907
EcoNI	CCTNNNNNAGG	1 cut(s)	87
EcoRI	GAATTC	1 cut(s)	337
EcoRII	CCWGG	1 cut(s)	1373
EcoRV	GATATC	1 cut(s)	646
EcoT14I	CCWWGG	3 cut(s)	104, 453, 856
EcoT22I	ATGCAT	1 cut(s)	982
ErhI	CCWWGG	3 cut(s)	104, 453, 856
FaeI	CATG	5 cut(s)	70, 179, 259, 457, 1220
FaqI	GGGAC	2 cut(s)	648, 781
FatI	CATG	5 cut(s)	66, 175, 255, 453, 1216
Fnu4HI	GCNGC	7 cut(s)	237, 240, 260, 270, 495, 1086, 1295
FokI	GGATG	2 cut(s)	785, 1321
Fsp4HI	GCNGC	7 cut(s)	237, 240, 260, 270, 495, 1086, 1295
FspBI	CTAG	4 cut(s)	84, 374, 728, 878
GluI	GCNGC	7 cut(s)	237, 240, 260, 270, 495, 1086, 1295
GsuI	CTGGAG	1 cut(s)	731
HaeIII	GGCC	1 cut(s)	316
HapII	CCGG	3 cut(s)	186, 318, 573
HgaI	GACGC	1 cut(s)	756
Hin1I	GRCGYC	1 cut(s)	767
Hin1II	CATG	5 cut(s)	70, 179, 259, 457, 1220
HincII	GTYRAC	1 cut(s)	621
HindII	GTYRAC	1 cut(s)	621
HindIII	AAGCTT	2 cut(s)	309, 1223
HpaII	CCGG	3 cut(s)	186, 318, 573
HphI	GGTGA	7 cut(s)	72, 87, 260, 271, 562, 881, 924
Hpy166II	GTNNAC	1 cut(s)	621
Hpy188I	TCNGA	7 cut(s)	127, 364, 381, 772, 999, 1050, 1201
Hpy188III	TCNNGA	6 cut(s)	17, 394, 689, 784, 914, 1119
Hpy8I	GTNNAC	1 cut(s)	621
Hpy99I	CGWCG	3 cut(s)	34, 772, 1334
HpyAV	CCTTC	7 cut(s)	17, 415, 452, 542, 960, 994, 1135
HpyCH4III	ACNGT	2 cut(s)	248, 1358
HpyF10VI	GCNNNNNNNGC	2 cut(s)	209, 1326
HpyF3I	CTNAG	3 cut(s)	624, 739, 1200
Hsp92I	GRCGYC	1 cut(s)	767
Hsp92II	CATG	5 cut(s)	70, 179, 259, 457, 1220
KspI	CCGCGG	1 cut(s)	136
Kzo9I	GATC	7 cut(s)	147, 295, 484, 601, 1040, 1196, 1381
Lsp1109I	GCAGC	6 cut(s)	226, 256, 271, 506, 1072, 1281
LweI	GCATC	2 cut(s)	387, 815
MaeI	CTAG	4 cut(s)	84, 374, 728, 878
MaeIII	GTNAC	1 cut(s)	893
MalI	GATC	7 cut(s)	149, 297, 486, 603, 1042, 1198, 1383
MboI	GATC	7 cut(s)	147, 295, 484, 601, 1040, 1196, 1381
MboII	GAAGA	5 cut(s)	314, 512, 515, 1178, 1361
MflI	RGATCY	2 cut(s)	1040, 1196
MhlI	GDGCHC	2 cut(s)	334, 429
MluCI	AATT	5 cut(s)	337, 369, 638, 677, 959
MlyI	GAGTC	3 cut(s)	774, 919, 988
MmeI	TCCRAC	1 cut(s)	750
Mph1103I	ATGCAT	1 cut(s)	982
MroXI	GAANNNNTTC	1 cut(s)	504
MseI	TTAA	5 cut(s)	111, 489, 533, 944, 975
MslI	CAYNNNNRTG	1 cut(s)	1049
MspA1I	CMGCKG	5 cut(s)	135, 239, 262, 497, 1390
MspI	CCGG	3 cut(s)	186, 318, 573
MspR9I	CCNGG	2 cut(s)	318, 1375
Mva1269I	GAATGC	1 cut(s)	1296
MvaI	CCWGG	1 cut(s)	1375
MvnI	CGCG	1 cut(s)	135
MwoI	GCNNNNNNNGC	2 cut(s)	209, 1326
NciI	CCSGG	1 cut(s)	318
NcoI	CCATGG	1 cut(s)	453
NdeII	GATC	7 cut(s)	147, 295, 484, 601, 1040, 1196, 1381
NlaIII	CATG	5 cut(s)	70, 179, 259, 457, 1220
NlaIV	GGNNCC	2 cut(s)	6, 1042
NsiI	ATGCAT	1 cut(s)	982
PctI	GAATGC	1 cut(s)	1296
PdmI	GAANNNNTTC	1 cut(s)	504
PfeI	GAWTC	7 cut(s)	300, 567, 917, 1025, 1067, 1106, 1237
PinAI	ACCGGT	1 cut(s)	572
PkrI	GCNGC	7 cut(s)	238, 241, 261, 271, 496, 1087, 1296
PleI	GAGTC	3 cut(s)	774, 918, 988
PpsI	GAGTC	3 cut(s)	774, 918, 988
Psp6I	CCWGG	1 cut(s)	1373
PspGI	CCWGG	1 cut(s)	1373
PspN4I	GGNNCC	2 cut(s)	6, 1042
PspPI	GGNCC	4 cut(s)	130, 315, 551, 1206
PstI	CTGCAG	1 cut(s)	1299
PsuI	RGATCY	2 cut(s)	1040, 1196
PvuII	CAGCTG	1 cut(s)	497
RsaI	GTAC	3 cut(s)	597, 1011, 1076
RsaNI	GTAC	3 cut(s)	596, 1010, 1075
RseI	CAYNNNNRTG	1 cut(s)	1049
SacII	CCGCGG	1 cut(s)	136
SaqAI	TTAA	5 cut(s)	111, 489, 533, 944, 975
SatI	GCNGC	7 cut(s)	237, 240, 260, 270, 495, 1086, 1295
Sau3AI	GATC	7 cut(s)	147, 295, 484, 601, 1040, 1196, 1381
Sau96I	GGNCC	4 cut(s)	130, 315, 551, 1206
SchI	GAGTC	3 cut(s)	774, 919, 988
ScrFI	CCNGG	2 cut(s)	318, 1375
SduI	GDGCHC	2 cut(s)	334, 429
SfaNI	GCATC	2 cut(s)	387, 815
SfcI	CTRYAG	1 cut(s)	1295
Sfr303I	CCGCGG	1 cut(s)	136
SgrAI	CRCCGGYG	1 cut(s)	572
SgrBI	CCGCGG	1 cut(s)	136
SinI	GGWCC	3 cut(s)	130, 551, 1206
SmiMI	CAYNNNNRTG	1 cut(s)	1049
SmlI	CTYRAG	2 cut(s)	215, 1226
SmoI	CTYRAG	2 cut(s)	215, 1226
Sse9I	AATT	5 cut(s)	337, 369, 638, 677, 959
SsiI	CCGC	7 cut(s)	133, 135, 237, 262, 554, 935, 1388
SspMI	CTAG	4 cut(s)	84, 374, 728, 878
StyD4I	CCNGG	2 cut(s)	316, 1373
StyI	CCWWGG	3 cut(s)	104, 453, 856
TaaI	ACNGT	2 cut(s)	248, 1358
TaqI	TCGA	6 cut(s)	298, 393, 483, 690, 1118, 1384
TaqII	GACCGA	1 cut(s)	1223
TasI	AATT	5 cut(s)	337, 369, 638, 677, 959
TatI	WGTACW	1 cut(s)	1074
TauI	GCSGC	1 cut(s)	239
TfiI	GAWTC	7 cut(s)	300, 567, 917, 1025, 1067, 1106, 1237
Tru1I	TTAA	5 cut(s)	111, 489, 533, 944, 975
Tru9I	TTAA	5 cut(s)	111, 489, 533, 944, 975
TscAI	CASTG	2 cut(s)	339, 515
TseI	GCWGC	6 cut(s)	239, 259, 269, 494, 1085, 1294
TspDTI	ATGAA	4 cut(s)	33, 381, 569, 1233
TspGWI	ACGGA	1 cut(s)	1302
TspRI	CASTG	2 cut(s)	339, 515
VpaK11BI	GGWCC	3 cut(s)	130, 551, 1206
XagI	CCTNNNNNAGG	1 cut(s)	87
XapI	RAATTY	2 cut(s)	337, 369
XmnI	GAANNNNTTC	1 cut(s)	504
XspI	CTAG	4 cut(s)	84, 374, 728, 878
Zsp2I	ATGCAT	1 cut(s)	982

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.