Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp02

Orthogroup ID

OG0003889

Physical Location & Seq

Genomic Coordinates Reverse (-)

15598310 .. 15600150

Gene Structure 1841 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.2G100200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1620 bp

ATGGCCTCCTTCCTCTTCCTCCCTCTCCTCTCCCTCACGCTCTTCCTCTCTCTCACCTCCGCCGCCCGCAACCTTCAACCCCGCAGGCACGTCACCGTCCCCGTCCCTCTGATCCAGCAAGTCTGCAAAGCCACGCGATTTCCCGACACTTGTCAGGCGTCCTTAGCCGGGCTCGTCACTGACCCAAACACCACCCCAATTCAAGCCATCCAATCCGCCATCCAGGTCTCCACCGATAGCCTCCACAAGGCGCAGAAGATGGTGAAGGCTATCCTAGACTCGTCTGCAGGCAACCAAAACCGCACCACCGCTGCTAACAATTGCCTCGACGACCTCGGGAACTCCCAGTACCGAATTTCTCTCACCACCGACGGCCTGTCACGTGGAAGCATTAAAAACGCACGTGCCTCGATGAGCGCCGCGCTGCTGTACCAATACGGCTGCTGGTCGGGCCTCAAGTACGCCAACGACACCCAGATGGTCAACGAGACCATGTCTTTTCTCGACTCGCTGGTCGGAAAGTCCAGCAACGCCCTCAGCATGATGTTCTCGTACGACAACTTCGGAAACGACACCAAGTTGTGGGCCCCTCCTAAGACCGAGCGCGAAGGGTTCTGGGAGCGGGTCGAGGGCAGAGGGTCAGGCCAGGGGGTTCGGGGCGGAGTGCCGTTGAATTTAACGGCGGACGTGACGGTGTGCAAGGAGAAGTATGAGAAATGCTACAGGACGGTTCAGAGGGCCGTGAACGCCGCACCGGATAATGCGGGAGAGAAGAAGTTCGTGATCCGCATAAAGGCTGGGGTGTACGACGAGATTGTGAGGGTGCCCTTAGAGAAGCGGAACGTGGTGTTTTTGGGTGACGGGATTGGCAAAACGGTAATTACAGGGTCGTTGAATGTGGGCATGCCCGGAATCTCCACGTACAATTCTGCCACAGTCGGTGTTCTTGGAGATGGGTTCATGGCCAGTGGTCTCACAATCCAGAACACAGCAGGTCCTGATGTCCACCAAGCAGTAGCCTTTAGATCAGACAGTGATCTCTCTGTGATTGAGAACTGTGAATTCTTAGGCAACCAGGACACTCTCTACGCACACGGCAACCGCCAGTTCTACAAGTCATGCAACATCCAAGGCAACGTCGATTTCATCTTCGGAAACTCAGCTGCGGTTTTCCAAGACTGCAACATCCTCATCCGCCCTCGACAACTAAACCCCGAGAACGGCGAAAGTAGCACCGTCACAGCTCACGGCAGAACAGACCCTGCACAATCAACTGGTTTCGTATTTCAGAACTGCTTGATCAATGGCACCGAAGAGTTCATGAAGCTGTATCAAAACAACCCCGAAGTGCACAAGAGCTACTTGGGGAGGCCATGGAAGGAGTATTCAAGGACAGTTTTTATAAACTGTACCATGGAAGCTCTTCTTTCCCCAGATGGGTGGATGACTTGGAGTGAGGATTTTGCTTTGAGCACCCTTTTTTATGGGGAGTTTGGTAATTCTGGAGCTGGTTCTGATTTTTCCAAGAGAGCGCCCTTTAGTAGCAAGATCCCATCTGAGCATGTTAATGCATATTCTGTGCAGAATTTTATTCAGGGAAATGAGTGGATTTCAACATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004857 GO:0005575 GO:0005623 GO:0005886 GO:0008150 GO:0016020 GO:0016787 GO:0016788 GO:0030234 GO:0030599 GO:0043086 GO:0044092 GO:0044464 GO:0046910 GO:0050790 GO:0052689 GO:0065007 GO:0065009 GO:0071944 GO:0098772

KEGG Pathways

Metabolic & Signaling

ko00040 ko01100 map00040 map01100

Pfam Domains

Protein Families

PMEI Pectinesterase

Protein Analysis

540

Amino Acids

58.99

Weight (kDa)

6.67

Isoelectric Point (pI)

31.93

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003889)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G09760 AT5G09760
fragaria_vesca	FvH4_1g24090 FvH4_5g14710
malus_domestica	MD02G1238800.v1.1 MD02G1238900.v1.1 MD07G1077900.v1.1 MD07G1078000.v1.1
prunus_persica	Prupe.2G099900_v2.0.a1 Prupe.2G100200_v2.0.a1 Prupe.2G100500_v2.0.a1
rosa_chinensis	RchiOBHm_Chr2g0120271 RchiOBHm_Chr7g0181681
rosa_laevigata	RLG00000005177 RLG00000018546
rosa_multiflora	Rmu_co8370367.1_g000001 Rmu_co8413969.1_g000001 Rmu_sc0000988.1_g000012 Rmu_sc0004523.1_g000012 Rmu_sc0031357.1_g000001
rosa_roxburghii	Rroxscaffold_2G00123580 Rroxscaffold_3G00271810
rosa_rugosa	Rorug02G0228100 Rorug06G0442700
rosa_samantha	Rh2AG284600 Rh2BG295600 Rh2CG273100 Rh2DG309600 Rh7AG045200 Rh7BG044400 Rh7CG045900 Rh7DG044800
rosa_wichuraiana	Rw2G022820 Rw7G003760

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1403
AasI	GACNNNNNNGTC	1 cut(s)	512
Acc36I	ACCTGC	1 cut(s)	983
AccB1I	GGYRCC	2 cut(s)	823, 1307
AccB7I	CCANNNNNTGG	1 cut(s)	582
AccBSI	CCGCTC	1 cut(s)	622
AccII	CGCG	3 cut(s)	136, 422, 606
AclWI	GGATC	3 cut(s)	106, 778, 1543
AcoI	YGGCCR	1 cut(s)	963
AcsI	RAATTY	4 cut(s)	354, 673, 1061, 1585
AcvI	CACGTG	2 cut(s)	383, 404
AcyI	GRCGYC	1 cut(s)	158
AfaI	GTAC	7 cut(s)	350, 431, 461, 554, 806, 923, 1411
AfiI	CCNNNNNNNGG	6 cut(s)	168, 247, 582, 793, 1220, 1437
AgsI	TTSAA	6 cut(s)	77, 203, 673, 895, 1389, 1614
AhdI	GACNNNNNGTC	1 cut(s)	376
AjiI	CACGTC	2 cut(s)	91, 688
AjnI	CCWGG	3 cut(s)	222, 645, 1074
AluBI	AGCT	6 cut(s)	1163, 1244, 1327, 1359, 1421, 1508
AluI	AGCT	6 cut(s)	1163, 1244, 1327, 1359, 1421, 1508
Alw21I	GWGCWC	2 cut(s)	1353, 1475
Alw26I	GTCTC	3 cut(s)	232, 482, 977
Alw44I	GTGCAC	1 cut(s)	1349
AlwI	GGATC	3 cut(s)	106, 778, 1543
AlwNI	CAGNNNCTG	2 cut(s)	998, 1262
Ama87I	CYCGRG	2 cut(s)	335, 1214
AoxI	GGCC	8 cut(s)	3, 373, 451, 585, 643, 738, 963, 1370
ApaI	GGGCCC	1 cut(s)	589
ApaLI	GTGCAC	1 cut(s)	1349
ApeKI	GCWGC	4 cut(s)	311, 424, 441, 1163
ApoI	RAATTY	4 cut(s)	354, 673, 1061, 1585
Asp700I	GAANNNNTTC	2 cut(s)	776, 1422
AspLEI	GCGC	5 cut(s)	253, 419, 424, 606, 1534
AspS9I	GGNCC	5 cut(s)	451, 585, 586, 738, 995
AsuC2I	CCSGG	2 cut(s)	169, 909
AsuHPI	GGTGA	5 cut(s)	46, 85, 274, 355, 869
AvaI	CYCGRG	2 cut(s)	335, 1214
AvaII	GGWCC	1 cut(s)	995
BaeGI	GKGCMC	3 cut(s)	589, 828, 1353
BalI	TGGCCA	1 cut(s)	965
BanI	GGYRCC	2 cut(s)	823, 1307
BanII	GRGCYC	2 cut(s)	174, 589
BarI	GAAGNNNNNNTAC	2 cut(s)	545, 577
BbrPI	CACGTG	2 cut(s)	383, 404
Bbv12I	GWGCWC	2 cut(s)	1353, 1475
BbvCI	CCTCAGC	1 cut(s)	536
BbvI	GCAGC	4 cut(s)	298, 411, 428, 1150
BccI	CCATC	7 cut(s)	215, 227, 253, 472, 947, 1430, 1561
BceAI	ACGGC	8 cut(s)	388, 454, 652, 696, 725, 1111, 1237, 1264
BcgI	CGANNNNNNTGC	2 cut(s)	390, 424
BciT130I	CCWGG	3 cut(s)	224, 647, 1076
BclI	TGATCA	1 cut(s)	1299
BcnI	CCSGG	2 cut(s)	169, 909
BcoDI	GTCTC	3 cut(s)	232, 482, 977
BfaI	CTAG	1 cut(s)	275
BfmI	CTRYAG	2 cut(s)	285, 721
BfoI	RGCGCY	2 cut(s)	420, 1535
BfuAI	ACCTGC	1 cut(s)	983
BisI	GCNGC	7 cut(s)	63, 312, 420, 425, 442, 750, 1164
BlsI	GCNGC	7 cut(s)	64, 313, 421, 426, 443, 751, 1165
Bme1390I	CCNGG	5 cut(s)	169, 224, 647, 909, 1076
Bme18I	GGWCC	1 cut(s)	995
BmeRI	GACNNNNNGTC	1 cut(s)	376
BmeT110I	CYCGRG	2 cut(s)	335, 1214
BmgBI	CACGTC	2 cut(s)	91, 688
BmgT120I	GGNCC	5 cut(s)	451, 585, 586, 738, 995
BmiI	GGNNCC	4 cut(s)	587, 588, 825, 1309
BmrFI	CCNGG	5 cut(s)	169, 224, 647, 909, 1076
BmrI	ACTGGG	1 cut(s)	340
BmuI	ACTGGG	1 cut(s)	340
BoxI	GACNNNNGTC	1 cut(s)	150
BpmI	CTGGAG	1 cut(s)	1524
Bpu10I	CCTNAGC	2 cut(s)	163, 536
BpuEI	CTTGAG	1 cut(s)	440
BpuMI	CCSGG	2 cut(s)	169, 909
BsaAI	YACGTR	3 cut(s)	383, 404, 921
BsaHI	GRCGYC	1 cut(s)	158
BsaI	GGTCTC	3 cut(s)	232, 482, 977
BsaJI	CCNNGG	5 cut(s)	334, 646, 1129, 1373, 1413
BsaWI	WCCGGW	1 cut(s)	754
Bsc4I	CCNNNNNNNGG	6 cut(s)	168, 247, 582, 793, 1220, 1437
Bse1I	ACTGG	4 cut(s)	346, 966, 1105, 1279
BseBI	CCWGG	3 cut(s)	224, 647, 1076
BseDI	CCNNGG	5 cut(s)	334, 646, 1129, 1373, 1413
BseGI	GGATG	6 cut(s)	207, 219, 1125, 1185, 1191, 1449
BseLI	CCNNNNNNNGG	6 cut(s)	168, 247, 582, 793, 1220, 1437
BseMII	CTCAG	3 cut(s)	550, 1173, 1548
BseNI	ACTGG	4 cut(s)	346, 966, 1105, 1279
BseRI	GAGGAG	1 cut(s)	17
BseSI	GKGCMC	3 cut(s)	589, 828, 1353
BseXI	GCAGC	4 cut(s)	298, 411, 428, 1150
BseYI	CCCAGC	1 cut(s)	797
BsgI	GTGCAG	2 cut(s)	1248, 1601
Bsh1236I	CGCG	3 cut(s)	136, 422, 606
BshFI	GGCC	8 cut(s)	5, 375, 453, 587, 645, 740, 965, 1372
BshNI	GGYRCC	2 cut(s)	823, 1307
BsiHKAI	GWGCWC	2 cut(s)	1353, 1475
BsiHKCI	CYCGRG	2 cut(s)	335, 1214
BsiSI	CCGG	3 cut(s)	168, 755, 909
BsiWI	CGTACG	1 cut(s)	552
BslFI	GGGAC	2 cut(s)	83, 89
BslI	CCNNNNNNNGG	6 cut(s)	168, 247, 582, 793, 1220, 1437
BsmAI	GTCTC	3 cut(s)	232, 482, 977
BsmFI	GGGAC	2 cut(s)	83, 89
BsnI	GGCC	8 cut(s)	5, 375, 453, 587, 645, 740, 965, 1372
Bso31I	GGTCTC	3 cut(s)	232, 482, 977
BsoBI	CYCGRG	2 cut(s)	335, 1214
Bsp120I	GGGCCC	1 cut(s)	585
Bsp1286I	GDGCHC	5 cut(s)	174, 589, 828, 1353, 1475
Bsp143I	GATC	6 cut(s)	111, 783, 1025, 1036, 1299, 1548
Bsp19I	CCATGG	2 cut(s)	1373, 1413
BspANI	GGCC	8 cut(s)	5, 375, 453, 587, 645, 740, 965, 1372
BspCNI	CTCAG	3 cut(s)	549, 1172, 1549
BspFNI	CGCG	3 cut(s)	136, 422, 606
BspHI	TCATGA	1 cut(s)	1320
BspLI	GGNNCC	4 cut(s)	587, 588, 825, 1309
BspMAI	CTGCAG	1 cut(s)	289
BspMI	ACCTGC	1 cut(s)	983
BspPI	GGATC	3 cut(s)	106, 778, 1543
BspQI	GCTCTTC	2 cut(s)	47, 1428
BspT107I	GGYRCC	2 cut(s)	823, 1307
BspTNI	GGTCTC	3 cut(s)	232, 482, 977
BsrBI	CCGCTC	1 cut(s)	622
BsrI	ACTGG	4 cut(s)	346, 966, 1105, 1279
BssECI	CCNNGG	5 cut(s)	334, 646, 1129, 1373, 1413
BssMI	GATC	6 cut(s)	111, 783, 1025, 1036, 1299, 1548
BssNI	GRCGYC	1 cut(s)	158
BssT1I	CCWWGG	3 cut(s)	1129, 1373, 1413
Bst2UI	CCWGG	3 cut(s)	224, 647, 1076
Bst6I	CTCTTC	4 cut(s)	20, 47, 1308, 1428
BstACI	GRCGYC	1 cut(s)	158
BstBAI	YACGTR	3 cut(s)	383, 404, 921
BstC8I	GCNNGC	4 cut(s)	67, 86, 289, 905
BstDEI	CTNAG	7 cut(s)	163, 536, 594, 829, 1066, 1159, 1557
BstDSI	CCRYGG	2 cut(s)	1373, 1413
BstENI	CCTNNNNNAGG	1 cut(s)	245
BstF5I	GGATG	6 cut(s)	207, 219, 1125, 1185, 1191, 1449
BstFNI	CGCG	3 cut(s)	136, 422, 606
BstH2I	RGCGCY	2 cut(s)	420, 1535
BstHHI	GCGC	5 cut(s)	253, 419, 424, 606, 1534
BstKTI	GATC	6 cut(s)	114, 786, 1028, 1039, 1302, 1551
BstMAI	GTCTC	3 cut(s)	232, 482, 977
BstMBI	GATC	6 cut(s)	111, 783, 1025, 1036, 1299, 1548
BstMWI	GCNNNNNNNGC	4 cut(s)	164, 450, 746, 1230
BstNI	CCWGG	3 cut(s)	224, 647, 1076
BstNSI	RCATGY	2 cut(s)	907, 1565
BstPAI	GACNNNNGTC	1 cut(s)	150
BstSCI	CCNGG	5 cut(s)	167, 222, 645, 907, 1074
BstSFI	CTRYAG	2 cut(s)	285, 721
BstSLI	GKGCMC	3 cut(s)	589, 828, 1353
BstUI	CGCG	3 cut(s)	136, 422, 606
BstV1I	GCAGC	4 cut(s)	298, 411, 428, 1150
BstX2I	RGATCY	1 cut(s)	1548
BstXI	CCANNNNNNTGG	1 cut(s)	1440
BstYI	RGATCY	1 cut(s)	1548
BsuRI	GGCC	8 cut(s)	5, 375, 453, 587, 645, 740, 965, 1372
BtgI	CCRYGG	2 cut(s)	1373, 1413
BtrI	CACGTC	2 cut(s)	91, 688
BtsCI	GGATG	6 cut(s)	207, 219, 1125, 1185, 1191, 1449
BtsIMutI	CAGTG	3 cut(s)	177, 973, 1039
BveI	ACCTGC	1 cut(s)	983
Cac8I	GCNNGC	4 cut(s)	67, 86, 289, 905
CaiI	CAGNNNCTG	2 cut(s)	998, 1262
CciI	TCATGA	1 cut(s)	1320
CfoI	GCGC	5 cut(s)	253, 419, 424, 606, 1534
Cfr13I	GGNCC	5 cut(s)	451, 585, 586, 738, 995
CseI	GACGC	1 cut(s)	147
Csp6I	GTAC	7 cut(s)	349, 430, 460, 553, 805, 922, 1410
CviQI	GTAC	7 cut(s)	349, 430, 460, 553, 805, 922, 1410
DdeI	CTNAG	7 cut(s)	163, 536, 594, 829, 1066, 1159, 1557
DpnI	GATC	6 cut(s)	113, 785, 1027, 1038, 1301, 1550
DpnII	GATC	6 cut(s)	111, 783, 1025, 1036, 1299, 1548
DrdI	GACNNNNNNGTC	1 cut(s)	512
DriI	GACNNNNNGTC	1 cut(s)	376
DseDI	GACNNNNNNGTC	1 cut(s)	512
EaeI	YGGCCR	1 cut(s)	963
Eam1104I	CTCTTC	4 cut(s)	20, 47, 1308, 1428
Eam1105I	GACNNNNNGTC	1 cut(s)	376
EarI	CTCTTC	4 cut(s)	20, 47, 1308, 1428
EciI	GGCGGA	5 cut(s)	49, 205, 675, 698, 1184
Eco130I	CCWWGG	3 cut(s)	1129, 1373, 1413
Eco24I	GRGCYC	2 cut(s)	174, 589
Eco31I	GGTCTC	3 cut(s)	232, 482, 977
Eco47I	GGWCC	1 cut(s)	995
Eco72I	CACGTG	2 cut(s)	383, 404
Eco88I	CYCGRG	2 cut(s)	335, 1214
EcoNI	CCTNNNNNAGG	1 cut(s)	245
EcoO109I	RGGNCCY	2 cut(s)	586, 995
EcoRI	GAATTC	1 cut(s)	1061
EcoRII	CCWGG	3 cut(s)	222, 645, 1074
EcoT14I	CCWWGG	3 cut(s)	1129, 1373, 1413
EcoT22I	ATGCAT	1 cut(s)	1573
EcoT38I	GRGCYC	2 cut(s)	174, 589
ErhI	CCWWGG	3 cut(s)	1129, 1373, 1413
FalI	AAGNNNNNCTT	4 cut(s)	1346, 1378, 1410, 1442
FaqI	GGGAC	2 cut(s)	83, 89
FauI	CCCGC	4 cut(s)	74, 89, 615, 757
FbaI	TGATCA	1 cut(s)	1299
Fnu4HI	GCNGC	7 cut(s)	63, 312, 420, 425, 442, 750, 1164
FokI	GGATG	6 cut(s)	194, 206, 1112, 1172, 1178, 1456
FriOI	GRGCYC	2 cut(s)	174, 589
Fsp4HI	GCNGC	7 cut(s)	63, 312, 420, 425, 442, 750, 1164
FspBI	CTAG	1 cut(s)	275
GlaI	GCGC	5 cut(s)	252, 418, 423, 605, 1533
GluI	GCNGC	7 cut(s)	63, 312, 420, 425, 442, 750, 1164
GsaI	CCCAGC	1 cut(s)	801
GsuI	CTGGAG	1 cut(s)	1524
HaeII	RGCGCY	2 cut(s)	420, 1535
HaeIII	GGCC	8 cut(s)	5, 375, 453, 587, 645, 740, 965, 1372
HapII	CCGG	3 cut(s)	168, 755, 909
HgaI	GACGC	1 cut(s)	147
HhaI	GCGC	5 cut(s)	253, 419, 424, 606, 1534
Hin1I	GRCGYC	1 cut(s)	158
Hin6I	GCGC	5 cut(s)	251, 417, 422, 604, 1532
HinP1I	GCGC	5 cut(s)	251, 417, 422, 604, 1532
HincII	GTYRAC	1 cut(s)	484
HindII	GTYRAC	1 cut(s)	484
HinfI	GANTC	3 cut(s)	278, 506, 912
HpaII	CCGG	3 cut(s)	168, 755, 909
HphI	GGTGA	5 cut(s)	46, 85, 274, 355, 869
Hpy166II	GTNNAC	5 cut(s)	484, 745, 805, 1006, 1351
Hpy188I	TCNGA	9 cut(s)	111, 518, 566, 735, 1030, 1154, 1290, 1516, 1558
Hpy188III	TCNNGA	8 cut(s)	143, 337, 503, 781, 982, 998, 1321, 1503
Hpy8I	GTNNAC	5 cut(s)	484, 745, 805, 1006, 1351
Hpy99I	CGWCG	4 cut(s)	332, 374, 812, 1142
HpyAV	CCTTC	5 cut(s)	19, 83, 259, 602, 1372
HpyCH4IV	ACGT	7 cut(s)	90, 382, 403, 687, 843, 920, 1137
HpyCH4V	TGCA	9 cut(s)	126, 287, 699, 1122, 1182, 1265, 1351, 1571, 1582
HpyF10VI	GCNNNNNNNGC	4 cut(s)	164, 450, 746, 1230
HpyF3I	CTNAG	7 cut(s)	163, 536, 594, 829, 1066, 1159, 1557
HpySE526I	ACGT	7 cut(s)	90, 382, 403, 687, 843, 920, 1137
Hsp92I	GRCGYC	1 cut(s)	158
HspAI	GCGC	5 cut(s)	251, 417, 422, 604, 1532
Ksp22I	TGATCA	1 cut(s)	1299
Kzo9I	GATC	6 cut(s)	111, 783, 1025, 1036, 1299, 1548
LguI	GCTCTTC	2 cut(s)	47, 1428
LmnI	GCTCC	2 cut(s)	619, 1505
Lsp1109I	GCAGC	4 cut(s)	298, 411, 428, 1150
MaeI	CTAG	1 cut(s)	275
MaeII	ACGT	7 cut(s)	90, 382, 403, 687, 843, 920, 1137
MaeIII	GTNAC	6 cut(s)	91, 175, 378, 688, 857, 1237
MalI	GATC	6 cut(s)	113, 785, 1027, 1038, 1301, 1550
MbiI	CCGCTC	1 cut(s)	622
MboI	GATC	6 cut(s)	111, 783, 1025, 1036, 1299, 1548
MboII	GAAGA	7 cut(s)	7, 34, 268, 784, 1141, 1325, 1415
MfeI	CAATTG	1 cut(s)	319
MflI	RGATCY	1 cut(s)	1548
MhlI	GDGCHC	5 cut(s)	174, 589, 828, 1353, 1475
MlsI	TGGCCA	1 cut(s)	965
MluCI	AATT	9 cut(s)	198, 319, 354, 673, 879, 925, 1061, 1498, 1585
MluNI	TGGCCA	1 cut(s)	965
MlyI	GAGTC	2 cut(s)	272, 500
MmeI	TCCRAC	1 cut(s)	496
Mox20I	TGGCCA	1 cut(s)	965
Mph1103I	ATGCAT	1 cut(s)	1573
MroXI	GAANNNNTTC	2 cut(s)	776, 1422
MscI	TGGCCA	1 cut(s)	965
MseI	TTAA	3 cut(s)	393, 677, 1566
MslI	CAYNNNNRTG	2 cut(s)	476, 1566
Msp20I	TGGCCA	1 cut(s)	965
MspA1I	CMGCKG	2 cut(s)	311, 1163
MspI	CCGG	3 cut(s)	168, 755, 909
MspR9I	CCNGG	5 cut(s)	169, 224, 647, 909, 1076
MteI	GCGCNGCGC	1 cut(s)	420
MunI	CAATTG	1 cut(s)	319
MvaI	CCWGG	3 cut(s)	224, 647, 1076
MvnI	CGCG	3 cut(s)	136, 422, 606
MwoI	GCNNNNNNNGC	4 cut(s)	164, 450, 746, 1230
NciI	CCSGG	2 cut(s)	169, 909
NcoI	CCATGG	2 cut(s)	1373, 1413
NdeII	GATC	6 cut(s)	111, 783, 1025, 1036, 1299, 1548
NlaIV	GGNNCC	4 cut(s)	587, 588, 825, 1309
NmuCI	GTSAC	6 cut(s)	91, 175, 378, 688, 857, 1237
NsiI	ATGCAT	1 cut(s)	1573
NspI	RCATGY	2 cut(s)	907, 1565
PaeI	GCATGC	1 cut(s)	907
PagI	TCATGA	1 cut(s)	1320
PciSI	GCTCTTC	2 cut(s)	47, 1428
PdmI	GAANNNNTTC	2 cut(s)	776, 1422
PfeI	GAWTC	1 cut(s)	912
Pfl23II	CGTACG	1 cut(s)	552
PflFI	GACNNNGTC	1 cut(s)	493
PflMI	CCANNNNNTGG	1 cut(s)	582
PkrI	GCNGC	7 cut(s)	64, 313, 421, 426, 443, 751, 1165
PleI	GAGTC	2 cut(s)	272, 500
PmaCI	CACGTG	2 cut(s)	383, 404
PmlI	CACGTG	2 cut(s)	383, 404
PpsI	GAGTC	2 cut(s)	272, 500
Ppu21I	YACGTR	3 cut(s)	383, 404, 921
PpuMI	RGGWCCY	1 cut(s)	995
PshAI	GACNNNNGTC	1 cut(s)	150
PsiI	TTATAA	1 cut(s)	1403
Psp5II	RGGWCCY	1 cut(s)	995
Psp6I	CCWGG	3 cut(s)	222, 645, 1074
PspCI	CACGTG	2 cut(s)	383, 404
PspFI	CCCAGC	1 cut(s)	797
PspGI	CCWGG	3 cut(s)	222, 645, 1074
PspLI	CGTACG	1 cut(s)	552
PspN4I	GGNNCC	4 cut(s)	587, 588, 825, 1309
PspOMI	GGGCCC	1 cut(s)	585
PspPI	GGNCC	5 cut(s)	451, 585, 586, 738, 995
PspPPI	RGGWCCY	1 cut(s)	995
PsrI	GAACNNNNNNTAC	2 cut(s)	332, 364
PstI	CTGCAG	1 cut(s)	289
PstNI	CAGNNNCTG	2 cut(s)	998, 1262
PsuI	RGATCY	1 cut(s)	1548
PsyI	GACNNNGTC	1 cut(s)	493
PvuII	CAGCTG	1 cut(s)	1163
RsaI	GTAC	7 cut(s)	350, 431, 461, 554, 806, 923, 1411
RsaNI	GTAC	7 cut(s)	349, 430, 460, 553, 805, 922, 1410
RseI	CAYNNNNRTG	2 cut(s)	476, 1566
SapI	GCTCTTC	2 cut(s)	47, 1428
SaqAI	TTAA	3 cut(s)	393, 677, 1566
SatI	GCNGC	7 cut(s)	63, 312, 420, 425, 442, 750, 1164
Sau3AI	GATC	6 cut(s)	111, 783, 1025, 1036, 1299, 1548
Sau96I	GGNCC	5 cut(s)	451, 585, 586, 738, 995
SchI	GAGTC	2 cut(s)	272, 500
ScrFI	CCNGG	5 cut(s)	169, 224, 647, 909, 1076
SduI	GDGCHC	5 cut(s)	174, 589, 828, 1353, 1475
SfcI	CTRYAG	2 cut(s)	285, 721
SinI	GGWCC	1 cut(s)	995
SmiMI	CAYNNNNRTG	2 cut(s)	476, 1566
SmlI	CTYRAG	1 cut(s)	455
SmoI	CTYRAG	1 cut(s)	455
SphI	GCATGC	1 cut(s)	907
Sse9I	AATT	9 cut(s)	198, 319, 354, 673, 879, 925, 1061, 1498, 1585
SspMI	CTAG	1 cut(s)	275
StyD4I	CCNGG	5 cut(s)	167, 222, 645, 907, 1074
StyI	CCWWGG	3 cut(s)	1129, 1373, 1413
TaiI	ACGT	7 cut(s)	93, 385, 406, 690, 846, 923, 1140
TaqI	TCGA	6 cut(s)	327, 410, 504, 627, 1140, 1201
TaqII	GACCGA	1 cut(s)	614
TasI	AATT	9 cut(s)	198, 319, 354, 673, 879, 925, 1061, 1498, 1585
TauI	GCSGC	3 cut(s)	65, 422, 752
TfiI	GAWTC	1 cut(s)	912
Tru1I	TTAA	3 cut(s)	393, 677, 1566
Tru9I	TTAA	3 cut(s)	393, 677, 1566
TscAI	CASTG	3 cut(s)	184, 973, 1039
TseFI	GTSAC	6 cut(s)	91, 175, 378, 688, 857, 1237
TseI	GCWGC	4 cut(s)	311, 424, 441, 1163
Tsp45I	GTSAC	6 cut(s)	91, 175, 378, 688, 857, 1237
TspDTI	ATGAA	4 cut(s)	949, 1135, 1309, 1337
TspRI	CASTG	3 cut(s)	184, 973, 1039
Tth111I	GACNNNGTC	1 cut(s)	493
Van91I	CCANNNNNTGG	1 cut(s)	582
VneI	GTGCAC	1 cut(s)	1349
VpaK11BI	GGWCC	1 cut(s)	995
XagI	CCTNNNNNAGG	1 cut(s)	245
XapI	RAATTY	4 cut(s)	354, 673, 1061, 1585
XceI	RCATGY	2 cut(s)	907, 1565
XmnI	GAANNNNTTC	2 cut(s)	776, 1422
XspI	CTAG	1 cut(s)	275
Zsp2I	ATGCAT	1 cut(s)	1573

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.