Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0004523.1

Orthogroup ID

OG0003889

Physical Location & Seq

Genomic Coordinates Forward (+)

60947 .. 63729

Gene Structure 2783 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0004523.1_g000012.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1614 bp

atggcctccttcgtcttcctctccctcctaaccctcactctcttcctctccctctcctccgccgcccgccaccgccacccttccgccaccgccgccgccgtcactcagatccaactcgcctgcaaagccacccgcttccccgacacgtgtcaatcctccctcgcccagctccctgaccttcctccgaacccgaccccaatcgagaccatcgggctagccatccgggtctcctccgatgggctcaagtcggcccagaaaatggtgacggacattcgagaagcgtccaaggggaaccagaaccgcaccctcgccgcgaataactgcctcgaggttctgagcaactccgagtaccgcatttcgcgggcgacggaggagctctcacgtgggcggaccaagagcgcacgtgccgccttcagcgccgccctgctctaccagtacgactgctggtcgggcctcaagtacgccaacgacacccagatggtcaaccaaacgatgtcgtttctcgacgggctgcaaagcaggtccagcaacgccctcagcatgatgttctcctacgaccactacggcgacgacaccagccagtgggcccctccgaagaccgagcgtgacgggttctgggagcgggggtcgggttcgggtccgggtttctcgggcggcgtgccgaagaatctgaaggcggacacgacggtgtgtaaggaggggtgtgagtaccggacggtgcaggaggcggtggacaaggcgccggagaatttggaggcagggaagaggttcgtgattcagataaagacgggggtgtacgaggagacggtgagggtggccttagggaagcggaacctggtgttcttgggcgacgggatgggcaagacggtaattaccggttcgttgaatgtgggccagcccggaatctccacctacaatacggccactgtcggagttcttggtgatgggttcatggccagtggtctcacaattgcaaacacagcaggccctgatgcccaccaggcagtggctttccgatcagacagcgatctatccgtgatcgagaactgtgaattcttaggaaatcaggacactctatatgcacatggcaaccgtcagctatacaaatcgtgcaaaatccaaggcaatgtggatttcatcttcggaaactcagctgccattttccaggactgcaacatcctcgttgctccccgacaactcaatcccgagaagggcgaaaacaatgccatcacagcccatggcaggacagaccctgcacagtcaaccggtttcgtttttcaaaattgcttgatcaacggaaccgaagagtacatgaaattgtattacagcaaaccccgagtgcacaaaaactacttggggaggccgtggaaggagtattcaaggacggttttcttaaattgcaatatggaagctctggttaccgcgcaggggtggctgccttggagtggggattttgctttgaagacacttttctatggggagtacgggaatacaggaacaggttcgaatttggaccagagagtgacctggagtagcaagattccgaccgagcatgttagtacatattcagtgcagaattttattcagggagatgagtggatggagaccatttag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004857 GO:0005575 GO:0005623 GO:0005886 GO:0008150 GO:0016020 GO:0016787 GO:0016788 GO:0030234 GO:0030599 GO:0043086 GO:0044092 GO:0044464 GO:0046910 GO:0050790 GO:0052689 GO:0065007 GO:0065009 GO:0071944 GO:0098772

KEGG Pathways

Metabolic & Signaling

ko00040 ko01100 map00040 map01100

Pfam Domains

Protein Families

PMEI Pectinesterase

Protein Analysis

537

Amino Acids

58.83

Weight (kDa)

6.48

Isoelectric Point (pI)

29.91

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003889)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G09760 AT5G09760
fragaria_vesca	FvH4_1g24090 FvH4_5g14710
malus_domestica	MD02G1238800.v1.1 MD02G1238900.v1.1 MD07G1077900.v1.1 MD07G1078000.v1.1
prunus_persica	Prupe.2G099900_v2.0.a1 Prupe.2G100200_v2.0.a1 Prupe.2G100500_v2.0.a1
rosa_chinensis	RchiOBHm_Chr2g0120271 RchiOBHm_Chr7g0181681
rosa_laevigata	RLG00000005177 RLG00000018546
rosa_multiflora	Rmu_co8370367.1_g000001 Rmu_co8413969.1_g000001 Rmu_sc0000988.1_g000012 Rmu_sc0004523.1_g000012 Rmu_sc0031357.1_g000001
rosa_roxburghii	Rroxscaffold_2G00123580 Rroxscaffold_3G00271810
rosa_rugosa	Rorug02G0228100 Rorug06G0442700
rosa_samantha	Rh2AG284600 Rh2BG295600 Rh2CG273100 Rh2DG309600 Rh7AG045200 Rh7BG044400 Rh7CG045900 Rh7DG044800
rosa_wichuraiana	Rw2G022820 Rw7G003760

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AbsI	CCTCGAGG	1 cut(s)	326
Acc36I	ACCTGC	1 cut(s)	510
AccB1I	GGYRCC	1 cut(s)	739
AccB7I	CCANNNNNTGG	3 cut(s)	259, 582, 1006
AccBSI	CCGCTC	1 cut(s)	622
AccII	CGCG	3 cut(s)	314, 361, 1424
AclWI	GGATC	1 cut(s)	103
AcoI	YGGCCR	2 cut(s)	921, 954
AcsI	RAATTY	4 cut(s)	748, 1052, 1507, 1576
AcuI	CTGAAG	2 cut(s)	397, 692
AcvI	CACGTG	3 cut(s)	147, 383, 404
AcyI	GRCGYC	1 cut(s)	740
AfaI	GTAC	8 cut(s)	350, 437, 461, 710, 797, 1310, 1484, 1561
AfiI	CCNNNNNNNGG	8 cut(s)	237, 259, 582, 1006, 1211, 1242, 1428, 1445
AflIII	ACRYGT	2 cut(s)	144, 146
AgeI	ACCGGT	2 cut(s)	875, 1265
AgsI	TTSAA	4 cut(s)	886, 1280, 1380, 1462
AhdI	GACNNNNNGTC	1 cut(s)	445
AjnI	CCWGG	4 cut(s)	834, 999, 1164, 1526
AleI	CACNNNNGTG	1 cut(s)	686
AluBI	AGCT	5 cut(s)	169, 376, 1099, 1154, 1412
AluI	AGCT	5 cut(s)	169, 376, 1099, 1154, 1412
Alw21I	GWGCWC	2 cut(s)	378, 1344
Alw26I	GTCTC	5 cut(s)	197, 232, 797, 968, 1598
Alw44I	GTGCAC	1 cut(s)	1340
AlwI	GGATC	1 cut(s)	103
AlwNI	CAGNNNCTG	2 cut(s)	989, 1253
Ama87I	CYCGRG	4 cut(s)	326, 649, 1205, 1335
ApaI	GGGCCC	1 cut(s)	589
ApaLI	GTGCAC	1 cut(s)	1340
ApeKI	GCWGC	3 cut(s)	511, 1154, 1435
ApoI	RAATTY	4 cut(s)	748, 1052, 1507, 1576
AsiGI	ACCGGT	2 cut(s)	875, 1265
Asp700I	GAANNNNTTC	2 cut(s)	767, 1501
AspLEI	GCGC	4 cut(s)	401, 419, 742, 1426
AsuC2I	CCSGG	3 cut(s)	224, 642, 900
AsuHPI	GGTGA	3 cut(s)	274, 820, 953
AsuII	TTCGAA	1 cut(s)	1505
AsuNHI	GCTAGC	1 cut(s)	214
AvaI	CYCGRG	4 cut(s)	326, 649, 1205, 1335
AvaII	GGWCC	4 cut(s)	390, 522, 638, 1513
AxyI	CCTNAGG	1 cut(s)	820
BaeGI	GKGCMC	2 cut(s)	589, 1344
BalI	TGGCCA	1 cut(s)	956
BanI	GGYRCC	1 cut(s)	739
BanII	GRGCYC	3 cut(s)	243, 378, 589
BbrPI	CACGTG	3 cut(s)	147, 383, 404
BbsI	GAAGAC	3 cut(s)	7, 602, 1469
Bbv12I	GWGCWC	2 cut(s)	378, 1344
BbvCI	CCTCAGC	1 cut(s)	536
BbvI	GCAGC	3 cut(s)	498, 1141, 1422
BccI	CCATC	8 cut(s)	215, 227, 230, 472, 850, 938, 1235, 1594
BceAI	ACGGC	4 cut(s)	83, 580, 936, 1348
BcgI	CGANNNNNNTGC	4 cut(s)	1162, 1196, 1205, 1239
BciT130I	CCWGG	4 cut(s)	836, 1001, 1166, 1528
BclI	TGATCA	1 cut(s)	1290
BcnI	CCSGG	3 cut(s)	224, 642, 900
BcoDI	GTCTC	5 cut(s)	197, 232, 797, 968, 1598
BfaI	CTAG	1 cut(s)	215
BfoI	RGCGCY	2 cut(s)	420, 743
BfuAI	ACCTGC	1 cut(s)	510
BglI	GCCNNNNNGGC	1 cut(s)	1001
Bme1390I	CCNGG	7 cut(s)	224, 642, 836, 900, 1001, 1166, 1528
Bme18I	GGWCC	4 cut(s)	390, 522, 638, 1513
BmeRI	GACNNNNNGTC	1 cut(s)	445
BmeT110I	CYCGRG	4 cut(s)	326, 649, 1205, 1335
BmiI	GGNNCC	7 cut(s)	293, 587, 588, 639, 741, 833, 1300
BmrFI	CCNGG	7 cut(s)	224, 642, 836, 900, 1001, 1166, 1528
BmsI	GCATC	1 cut(s)	982
BmtI	GCTAGC	1 cut(s)	218
BoxI	GACNNNNGTC	1 cut(s)	147
BpiI	GAAGAC	3 cut(s)	7, 602, 1469
BplI	GAGNNNNNCTC	2 cut(s)	362, 394
BpmI	CTGGAG	1 cut(s)	1549
Bpu10I	CCTNAGC	1 cut(s)	536
Bpu14I	TTCGAA	1 cut(s)	1505
BpuEI	CTTGAG	2 cut(s)	227, 440
BpuMI	CCSGG	3 cut(s)	224, 642, 900
BsaAI	YACGTR	3 cut(s)	147, 383, 404
BsaHI	GRCGYC	1 cut(s)	740
BsaI	GGTCTC	4 cut(s)	197, 232, 968, 1598
BsaJI	CCNNGG	5 cut(s)	285, 1120, 1237, 1364, 1439
BsaWI	WCCGGW	3 cut(s)	711, 875, 1265
BsaXI	ACNNNNNCTCC	2 cut(s)	611, 641
Bsc4I	CCNNNNNNNGG	8 cut(s)	237, 259, 582, 1006, 1211, 1242, 1428, 1445
Bse118I	RCCGGY	2 cut(s)	875, 1265
Bse1I	ACTGG	3 cut(s)	433, 580, 957
Bse21I	CCTNAGG	1 cut(s)	820
Bse3DI	GCAATG	1 cut(s)	1132
BseBI	CCWGG	4 cut(s)	836, 1001, 1166, 1528
BseDI	CCNNGG	5 cut(s)	285, 1120, 1237, 1364, 1439
BseGI	GGATG	4 cut(s)	219, 861, 1176, 1605
BseLI	CCNNNNNNNGG	8 cut(s)	237, 259, 582, 1006, 1211, 1242, 1428, 1445
BseMI	GCAATG	1 cut(s)	1132
BseMII	CTCAG	4 cut(s)	119, 326, 550, 1164
BseNI	ACTGG	3 cut(s)	433, 580, 957
BseRI	GAGGAG	4 cut(s)	46, 220, 386, 815
BseSI	GKGCMC	2 cut(s)	589, 1344
BseXI	GCAGC	3 cut(s)	498, 1141, 1422
BseYI	CCCAGC	1 cut(s)	165
BsgI	GTGCAG	3 cut(s)	740, 1239, 1592
Bsh1236I	CGCG	3 cut(s)	314, 361, 1424
Bsh1285I	CGRYCG	1 cut(s)	1548
BshNI	GGYRCC	1 cut(s)	739
BshTI	ACCGGT	2 cut(s)	875, 1265
BsiEI	CGRYCG	1 cut(s)	1548
BsiHKAI	GWGCWC	2 cut(s)	378, 1344
BsiHKCI	CYCGRG	4 cut(s)	326, 649, 1205, 1335
BsiSI	CCGG	7 cut(s)	223, 641, 712, 743, 876, 900, 1266
BslI	CCNNNNNNNGG	8 cut(s)	237, 259, 582, 1006, 1211, 1242, 1428, 1445
BsmAI	GTCTC	5 cut(s)	197, 232, 797, 968, 1598
BsmBI	CGTCTC	1 cut(s)	797
Bso31I	GGTCTC	4 cut(s)	197, 232, 968, 1598
BsoBI	CYCGRG	4 cut(s)	326, 649, 1205, 1335
Bsp119I	TTCGAA	1 cut(s)	1505
Bsp120I	GGGCCC	1 cut(s)	585
Bsp1286I	GDGCHC	4 cut(s)	243, 378, 589, 1344
Bsp143I	GATC	5 cut(s)	108, 1016, 1027, 1038, 1290
Bsp19I	CCATGG	1 cut(s)	1237
BspCNI	CTCAG	4 cut(s)	118, 327, 549, 1163
BspFNI	CGCG	3 cut(s)	314, 361, 1424
BspLI	GGNNCC	7 cut(s)	293, 587, 588, 639, 741, 833, 1300
BspMI	ACCTGC	1 cut(s)	510
BspOI	GCTAGC	1 cut(s)	218
BspPI	GGATC	1 cut(s)	103
BspT104I	TTCGAA	1 cut(s)	1505
BspT107I	GGYRCC	1 cut(s)	739
BspTNI	GGTCTC	4 cut(s)	197, 232, 968, 1598
BsrBI	CCGCTC	1 cut(s)	622
BsrDI	GCAATG	1 cut(s)	1132
BsrFI	RCCGGY	2 cut(s)	875, 1265
BsrI	ACTGG	3 cut(s)	433, 580, 957
BssAI	RCCGGY	2 cut(s)	875, 1265
BssECI	CCNNGG	5 cut(s)	285, 1120, 1237, 1364, 1439
BssMI	GATC	5 cut(s)	108, 1016, 1027, 1038, 1290
BssNI	GRCGYC	1 cut(s)	740
BssT1I	CCWWGG	4 cut(s)	285, 1120, 1237, 1439
Bst2UI	CCWGG	4 cut(s)	836, 1001, 1166, 1528
Bst4CI	ACNGT	9 cut(s)	688, 718, 808, 868, 928, 1049, 1094, 1260, 1387
Bst6I	CTCTTC	3 cut(s)	47, 758, 1299
BstACI	GRCGYC	1 cut(s)	740
BstBAI	YACGTR	3 cut(s)	147, 383, 404
BstBI	TTCGAA	1 cut(s)	1505
BstC8I	GCNNGC	7 cut(s)	67, 121, 216, 363, 659, 896, 985
BstDEI	CTNAG	6 cut(s)	105, 335, 536, 820, 1057, 1150
BstDSI	CCRYGG	2 cut(s)	1237, 1364
BstEII	GGTNACC	1 cut(s)	1417
BstF5I	GGATG	4 cut(s)	219, 861, 1176, 1605
BstFNI	CGCG	3 cut(s)	314, 361, 1424
BstH2I	RGCGCY	2 cut(s)	420, 743
BstHHI	GCGC	4 cut(s)	401, 419, 742, 1426
BstKTI	GATC	5 cut(s)	111, 1019, 1030, 1041, 1293
BstMAI	GTCTC	5 cut(s)	197, 232, 797, 968, 1598
BstMBI	GATC	5 cut(s)	108, 1016, 1027, 1038, 1290
BstMCI	CGRYCG	1 cut(s)	1548
BstNI	CCWGG	4 cut(s)	836, 1001, 1166, 1528
BstNSI	RCATGY	1 cut(s)	1556
BstPAI	GACNNNNGTC	1 cut(s)	147
BstPI	GGTNACC	1 cut(s)	1417
BstSCI	CCNGG	7 cut(s)	222, 640, 834, 898, 999, 1164, 1526
BstSLI	GKGCMC	2 cut(s)	589, 1344
BstUI	CGCG	3 cut(s)	314, 361, 1424
BstV1I	GCAGC	3 cut(s)	498, 1141, 1422
BstV2I	GAAGAC	3 cut(s)	7, 602, 1469
BstX2I	RGATCY	1 cut(s)	108
BstYI	RGATCY	1 cut(s)	108
Bsu36I	CCTNAGG	1 cut(s)	820
BtgI	CCRYGG	2 cut(s)	1237, 1364
BtsCI	GGATG	4 cut(s)	219, 861, 1176, 1605
BtsI	GCAGTG	1 cut(s)	1011
BtsIMutI	CAGTG	5 cut(s)	587, 924, 964, 1011, 1575
BveI	ACCTGC	1 cut(s)	510
Cac8I	GCNNGC	7 cut(s)	67, 121, 216, 363, 659, 896, 985
CaiI	CAGNNNCTG	2 cut(s)	989, 1253
CfoI	GCGC	4 cut(s)	401, 419, 742, 1426
Cfr10I	RCCGGY	2 cut(s)	875, 1265
CseI	GACGC	1 cut(s)	270
CsiI	ACCWGGT	1 cut(s)	834
Csp6I	GTAC	8 cut(s)	349, 436, 460, 709, 796, 1309, 1483, 1560
CspAI	ACCGGT	2 cut(s)	875, 1265
CviAII	CATG	6 cut(s)	541, 952, 1085, 1238, 1312, 1553
CviQI	GTAC	8 cut(s)	349, 436, 460, 709, 796, 1309, 1483, 1560
DdeI	CTNAG	6 cut(s)	105, 335, 536, 820, 1057, 1150
DinI	GGCGCC	1 cut(s)	741
DpnI	GATC	5 cut(s)	110, 1018, 1029, 1040, 1292
DpnII	GATC	5 cut(s)	108, 1016, 1027, 1038, 1290
DriI	GACNNNNNGTC	1 cut(s)	445
EaeI	YGGCCR	2 cut(s)	921, 954
Eam1104I	CTCTTC	3 cut(s)	47, 758, 1299
Eam1105I	GACNNNNNGTC	1 cut(s)	445
EarI	CTCTTC	3 cut(s)	47, 758, 1299
EciI	GGCGGA	4 cut(s)	49, 73, 403, 692
Ecl136II	GAGCTC	1 cut(s)	376
Eco130I	CCWWGG	4 cut(s)	285, 1120, 1237, 1439
Eco24I	GRGCYC	3 cut(s)	243, 378, 589
Eco31I	GGTCTC	4 cut(s)	197, 232, 968, 1598
Eco47I	GGWCC	4 cut(s)	390, 522, 638, 1513
Eco53kI	GAGCTC	1 cut(s)	376
Eco57I	CTGAAG	2 cut(s)	397, 692
Eco72I	CACGTG	3 cut(s)	147, 383, 404
Eco81I	CCTNAGG	1 cut(s)	820
Eco88I	CYCGRG	4 cut(s)	326, 649, 1205, 1335
Eco91I	GGTNACC	1 cut(s)	1417
EcoICRI	GAGCTC	1 cut(s)	376
EcoO109I	RGGNCCY	2 cut(s)	586, 986
EcoO65I	GGTNACC	1 cut(s)	1417
EcoRI	GAATTC	1 cut(s)	1052
EcoRII	CCWGG	4 cut(s)	834, 999, 1164, 1526
EcoT14I	CCWWGG	4 cut(s)	285, 1120, 1237, 1439
EcoT38I	GRGCYC	3 cut(s)	243, 378, 589
EgeI	GGCGCC	1 cut(s)	741
EheI	GGCGCC	1 cut(s)	741
ErhI	CCWWGG	4 cut(s)	285, 1120, 1237, 1439
Esp3I	CGTCTC	1 cut(s)	797
FaeI	CATG	6 cut(s)	544, 955, 1088, 1241, 1315, 1556
FatI	CATG	6 cut(s)	540, 951, 1084, 1237, 1311, 1552
FauI	CCCGC	4 cut(s)	74, 140, 354, 615
FbaI	TGATCA	1 cut(s)	1290
FokI	GGATG	3 cut(s)	206, 868, 1163
FriOI	GRGCYC	3 cut(s)	243, 378, 589
FspBI	CTAG	1 cut(s)	215
GlaI	GCGC	4 cut(s)	400, 418, 741, 1425
GsaI	CCCAGC	1 cut(s)	169
GsuI	CTGGAG	1 cut(s)	1549
HaeII	RGCGCY	2 cut(s)	420, 743
HapII	CCGG	7 cut(s)	223, 641, 712, 743, 876, 900, 1266
HgaI	GACGC	1 cut(s)	270
HhaI	GCGC	4 cut(s)	401, 419, 742, 1426
Hin1I	GRCGYC	1 cut(s)	740
Hin1II	CATG	6 cut(s)	544, 955, 1088, 1241, 1315, 1556
Hin6I	GCGC	4 cut(s)	399, 417, 740, 1424
HinP1I	GCGC	4 cut(s)	399, 417, 740, 1424
HincII	GTYRAC	2 cut(s)	484, 1263
HindII	GTYRAC	2 cut(s)	484, 1263
HinfI	GANTC	4 cut(s)	667, 775, 903, 1540
HpaII	CCGG	7 cut(s)	223, 641, 712, 743, 876, 900, 1266
HphI	GGTGA	3 cut(s)	274, 820, 953
Hpy166II	GTNNAC	5 cut(s)	484, 733, 796, 1263, 1342
Hpy188III	TCNNGA	7 cut(s)	202, 275, 503, 772, 1042, 1067, 1205
Hpy8I	GTNNAC	5 cut(s)	484, 733, 796, 1263, 1342
Hpy99I	CGWCG	5 cut(s)	370, 509, 572, 688, 854
HpyAV	CCTTC	7 cut(s)	19, 90, 188, 421, 667, 1204, 1363
HpyCH4III	ACNGT	9 cut(s)	688, 718, 808, 868, 928, 1049, 1094, 1260, 1387
HpyCH4IV	ACGT	3 cut(s)	146, 382, 403
HpyF3I	CTNAG	6 cut(s)	105, 335, 536, 820, 1057, 1150
HpySE526I	ACGT	3 cut(s)	146, 382, 403
Hsp92I	GRCGYC	1 cut(s)	740
Hsp92II	CATG	6 cut(s)	544, 955, 1088, 1241, 1315, 1556
HspAI	GCGC	4 cut(s)	399, 417, 740, 1424
KasI	GGCGCC	1 cut(s)	739
Ksp22I	TGATCA	1 cut(s)	1290
Kzo9I	GATC	5 cut(s)	108, 1016, 1027, 1038, 1290
LmnI	GCTCC	4 cut(s)	174, 373, 619, 1192
Lsp1109I	GCAGC	3 cut(s)	498, 1141, 1422
LweI	GCATC	1 cut(s)	982
MabI	ACCWGGT	1 cut(s)	834
MaeI	CTAG	1 cut(s)	215
MaeII	ACGT	3 cut(s)	146, 382, 403
MaeIII	GTNAC	5 cut(s)	100, 262, 605, 1417, 1522
MalI	GATC	5 cut(s)	110, 1018, 1029, 1040, 1292
MbiI	CCGCTC	1 cut(s)	622
MboI	GATC	5 cut(s)	108, 1016, 1027, 1038, 1290
MboII	GAAGA	8 cut(s)	7, 34, 607, 676, 775, 1132, 1316, 1474
MfeI	CAATTG	1 cut(s)	969
MflI	RGATCY	1 cut(s)	108
MhlI	GDGCHC	4 cut(s)	243, 378, 589, 1344
MlsI	TGGCCA	1 cut(s)	956
MluCI	AATT	9 cut(s)	748, 870, 969, 1052, 1282, 1316, 1396, 1507, 1576
MluNI	TGGCCA	1 cut(s)	956
Mly113I	GGCGCC	1 cut(s)	740
MmeI	TCCRAC	3 cut(s)	136, 910, 1568
Mox20I	TGGCCA	1 cut(s)	956
MroXI	GAANNNNTTC	2 cut(s)	767, 1501
MscI	TGGCCA	1 cut(s)	956
MseI	TTAA	1 cut(s)	1394
MslI	CAYNNNNRTG	2 cut(s)	476, 686
Msp20I	TGGCCA	1 cut(s)	956
MspA1I	CMGCKG	1 cut(s)	1154
MspI	CCGG	7 cut(s)	223, 641, 712, 743, 876, 900, 1266
MspR9I	CCNGG	7 cut(s)	224, 642, 836, 900, 1001, 1166, 1528
MunI	CAATTG	1 cut(s)	969
MvaI	CCWGG	4 cut(s)	836, 1001, 1166, 1528
MvnI	CGCG	3 cut(s)	314, 361, 1424
NarI	GGCGCC	1 cut(s)	740
NciI	CCSGG	3 cut(s)	224, 642, 900
NcoI	CCATGG	1 cut(s)	1237
NdeII	GATC	5 cut(s)	108, 1016, 1027, 1038, 1290
NheI	GCTAGC	1 cut(s)	214
NlaIII	CATG	6 cut(s)	544, 955, 1088, 1241, 1315, 1556
NlaIV	GGNNCC	7 cut(s)	293, 587, 588, 639, 741, 833, 1300
NmuCI	GTSAC	4 cut(s)	100, 262, 605, 1522
NspI	RCATGY	1 cut(s)	1556
NspV	TTCGAA	1 cut(s)	1505
OliI	CACNNNNGTG	1 cut(s)	686
PaeR7I	CTCGAG	1 cut(s)	326
PdmI	GAANNNNTTC	2 cut(s)	767, 1501
PfeI	GAWTC	4 cut(s)	667, 775, 903, 1540
PflMI	CCANNNNNTGG	3 cut(s)	259, 582, 1006
PfoI	TCCNGGA	1 cut(s)	1164
PinAI	ACCGGT	2 cut(s)	875, 1265
PluTI	GGCGCC	1 cut(s)	743
PmaCI	CACGTG	3 cut(s)	147, 383, 404
PmlI	CACGTG	3 cut(s)	147, 383, 404
Ppu21I	YACGTR	3 cut(s)	147, 383, 404
PshAI	GACNNNNGTC	1 cut(s)	147
Psp124BI	GAGCTC	1 cut(s)	378
Psp6I	CCWGG	4 cut(s)	834, 999, 1164, 1526
PspCI	CACGTG	3 cut(s)	147, 383, 404
PspEI	GGTNACC	1 cut(s)	1417
PspFI	CCCAGC	1 cut(s)	165
PspGI	CCWGG	4 cut(s)	834, 999, 1164, 1526
PspN4I	GGNNCC	7 cut(s)	293, 587, 588, 639, 741, 833, 1300
PspOMI	GGGCCC	1 cut(s)	585
PspXI	VCTCGAGB	1 cut(s)	326
PstNI	CAGNNNCTG	2 cut(s)	989, 1253
PsuI	RGATCY	1 cut(s)	108
PvuII	CAGCTG	1 cut(s)	1154
RsaI	GTAC	8 cut(s)	350, 437, 461, 710, 797, 1310, 1484, 1561
RsaNI	GTAC	8 cut(s)	349, 436, 460, 709, 796, 1309, 1483, 1560
RseI	CAYNNNNRTG	2 cut(s)	476, 686
SacI	GAGCTC	1 cut(s)	378
SaqAI	TTAA	1 cut(s)	1394
Sau3AI	GATC	5 cut(s)	108, 1016, 1027, 1038, 1290
ScrFI	CCNGG	7 cut(s)	224, 642, 836, 900, 1001, 1166, 1528
SduI	GDGCHC	4 cut(s)	243, 378, 589, 1344
SexAI	ACCWGGT	1 cut(s)	834
SfaNI	GCATC	1 cut(s)	982
SfoI	GGCGCC	1 cut(s)	741
Sfr274I	CTCGAG	1 cut(s)	326
SfuI	TTCGAA	1 cut(s)	1505
SinI	GGWCC	4 cut(s)	390, 522, 638, 1513
SlaI	CTCGAG	1 cut(s)	326
SmiMI	CAYNNNNRTG	2 cut(s)	476, 686
SmlI	CTYRAG	3 cut(s)	242, 326, 455
SmoI	CTYRAG	3 cut(s)	242, 326, 455
Sse9I	AATT	9 cut(s)	748, 870, 969, 1052, 1282, 1316, 1396, 1507, 1576
SspDI	GGCGCC	1 cut(s)	739
SspMI	CTAG	1 cut(s)	215
SstI	GAGCTC	1 cut(s)	378
StyD4I	CCNGG	7 cut(s)	222, 640, 834, 898, 999, 1164, 1526
StyI	CCWWGG	4 cut(s)	285, 1120, 1237, 1439
TaaI	ACNGT	9 cut(s)	688, 718, 808, 868, 928, 1049, 1094, 1260, 1387
TaiI	ACGT	3 cut(s)	149, 385, 406
TaqI	TCGA	6 cut(s)	201, 274, 327, 504, 1041, 1505
TaqII	GACCGA	2 cut(s)	614, 1562
TasI	AATT	9 cut(s)	748, 870, 969, 1052, 1282, 1316, 1396, 1507, 1576
TatI	WGTACW	2 cut(s)	1308, 1559
TauI	GCSGC	7 cut(s)	65, 95, 98, 314, 410, 422, 657
TfiI	GAWTC	4 cut(s)	667, 775, 903, 1540
Tru1I	TTAA	1 cut(s)	1394
Tru9I	TTAA	1 cut(s)	1394
TscAI	CASTG	5 cut(s)	587, 931, 964, 1011, 1575
TseFI	GTSAC	4 cut(s)	100, 262, 605, 1522
TseI	GCWGC	3 cut(s)	511, 1154, 1435
Tsp45I	GTSAC	4 cut(s)	100, 262, 605, 1522
TspDTI	ATGAA	3 cut(s)	940, 1126, 1328
TspGWI	ACGGA	4 cut(s)	281, 383, 1024, 1311
TspRI	CASTG	5 cut(s)	587, 931, 964, 1011, 1575
Van91I	CCANNNNNTGG	3 cut(s)	259, 582, 1006
VneI	GTGCAC	1 cut(s)	1340
VpaK11BI	GGWCC	4 cut(s)	390, 522, 638, 1513
XapI	RAATTY	4 cut(s)	748, 1052, 1507, 1576
XceI	RCATGY	1 cut(s)	1556
XhoI	CTCGAG	1 cut(s)	326
XmnI	GAANNNNTTC	2 cut(s)	767, 1501
XspI	CTAG	1 cut(s)	215

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.