Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7A

Orthogroup ID

OG0003889

Physical Location & Seq

Genomic Coordinates Forward (+)

3058317 .. 3059693

Gene Structure 1377 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7AG045200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1377 bp

ATGGTTTCCGACATTCTCAAAACCGCCGCCGGCAGCCAGAACCGCACAACCGCCGCCAAAAACTGCCTCGATTTTCTACAAAATTCCGAGTACCGTATTTCACTCACCAATGACGGCCTCTCACGTGGCCGTACCAAGACCGCACGAGCCGCCATGAGCTCCGCCCTGATGTACCAGTACGACTGCTGGTCCGCCTTCAAGTACGCCAACGACACCCAGTTGGTCGTCTCCACCATGTCGTTCATTAACGACACGCTGACCGTGGACTCCAGCAACGCCCTTAGCATGATCTTCTCCTACGAAAACTTCGGAAACGACACCAAGTCCTGGACCCCGCCCAAGACCGAGCGAGACGGATTCTGGGAACCTGTCACGCCCGGATCACAAAAGTCCCCTCCAGAACTTTCGATACCGAAAAATCTGATGGCAGACGTGACTGTTTGCAAGGACAAAGGTATTAAGTGTTACCGGACTATACAGGAGGCGGTGAACGCGGCGCCGGAAAACTCCGACAAGAAATTCGTGATTCAGATAAATGCCGGGGTGTATGAAGAGATTGTTAAGGTTCCTCTAGGGAAGAGAAATGTTGTGTTTTTAGGGCAAGGGATGGGCAAAACAGTAATTACAGGTTCTTTGTTTGTGGGCCAGCCGGGAATTTCGACCTACAACTCCGCCACCGTGGGTGTTTACGGCGACGGCTTCATGGCCAGAGGCGTCACATTCCAAAACACGGCGGGTCCCGACGCCCAGCAGGAGGTTCACCAGGCGGTGGCTTTCCGATCAGACAGTGATCACTCCATCATAGAAAATTGTGAGTTCCTAGGGCACCAAGACACTCTCTACGCCCACGGCAACCGCCAGTTCTACAAGTCATGCAAAATTCAAGGCAATGTAGATTTTATATTTGGAAACTCGGCTGCCATTTTCGAGGGCTGCACCATCCTCATTGCGCCGAGGCAAGTAAACCCCGAAAAAGGCGAGAAGAATGCCGTGACGGCTCACGGCAGGACGGACCCGGCGCAGGCGACAGGGTTCGTGTTCCGGAACTGCTTCATAAACGGAACGGAAGAGTACATGAAGTTGTACAACATTAACCCCAAAGTGCACTTGAACTTCTTGGGGAGGCCGTGGAAGGAGTTTTCGAGGACGGTGTTCTTGAACTGTAGTATGGAAGTTCTGGTTTCGAAAGAAGGGTGGTTGCCTTGGAGTGAGGAGTTTGCTTTGGCGACGCTTTACTATGGGGAGTATGGGAACTCGGGACCGGGGGCGGATTTGGCCGGGAGGGTGAAGTGGAGTAGCCGGATTCCGGTACAGCATGTTGGTGCATATTCGGTGCAAAATTTTATTCAGGGAGATGAGTGGTTGGTTTCCAACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004857 GO:0005575 GO:0005623 GO:0005886 GO:0008150 GO:0016020 GO:0016787 GO:0016788 GO:0030234 GO:0030599 GO:0043086 GO:0044092 GO:0044464 GO:0046910 GO:0050790 GO:0052689 GO:0065007 GO:0065009 GO:0071944 GO:0098772

KEGG Pathways

Metabolic & Signaling

ko00040 ko01100 map00040 map01100

Pfam Domains

Protein Families

PMEI Pectinesterase

Protein Analysis

458

Amino Acids

50.62

Weight (kDa)

6.41

Isoelectric Point (pI)

27.04

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PMEI	PF04043	2 - 96	1.3e-07	Plant invertase/pectin methylesterase inhibitor
Pectinesterase	PF01095	144 - 452	1.7e-112	Pectinesterase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0003889)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G09760 AT5G09760
fragaria_vesca	FvH4_1g24090 FvH4_5g14710
malus_domestica	MD02G1238800.v1.1 MD02G1238900.v1.1 MD07G1077900.v1.1 MD07G1078000.v1.1
prunus_persica	Prupe.2G099900_v2.0.a1 Prupe.2G100200_v2.0.a1 Prupe.2G100500_v2.0.a1
rosa_chinensis	RchiOBHm_Chr2g0120271 RchiOBHm_Chr7g0181681
rosa_laevigata	RLG00000005177 RLG00000018546
rosa_multiflora	Rmu_co8370367.1_g000001 Rmu_co8413969.1_g000001 Rmu_sc0000988.1_g000012 Rmu_sc0004523.1_g000012 Rmu_sc0031357.1_g000001
rosa_roxburghii	Rroxscaffold_2G00123580 Rroxscaffold_3G00271810
rosa_rugosa	Rorug02G0228100 Rorug06G0442700
rosa_samantha	Rh2AG284600 Rh2BG295600 Rh2CG273100 Rh2DG309600 Rh7AG045200 Rh7BG044400 Rh7CG045900 Rh7DG044800
rosa_wichuraiana	Rw2G022820 Rw7G003760

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	496, 825
AccB7I	CCANNNNNTGG	2 cut(s)	327, 769
AccII	CGCG	1 cut(s)	494
AccIII	TCCGGA	1 cut(s)	1041
AclWI	GGATC	1 cut(s)	388
AcoI	YGGCCR	3 cut(s)	127, 705, 1275
AcsI	RAATTY	5 cut(s)	82, 518, 654, 879, 1339
AcvI	CACGTG	1 cut(s)	125
AcyI	GRCGYC	3 cut(s)	497, 714, 744
AfaI	GTAC	8 cut(s)	92, 133, 173, 179, 203, 1073, 1085, 1311
AfiI	CCNNNNNNNGG	7 cut(s)	327, 730, 754, 769, 974, 1021, 1306
AgsI	TTSAA	4 cut(s)	199, 884, 1111, 1159
AhdI	GACNNNNNGTC	2 cut(s)	187, 322
AjiI	CACGTC	1 cut(s)	433
AjnI	CCWGG	2 cut(s)	326, 762
AluBI	AGCT	1 cut(s)	159
AluI	AGCT	1 cut(s)	159
Alw21I	GWGCWC	2 cut(s)	161, 1107
Alw26I	GTCTC	2 cut(s)	232, 345
Alw44I	GTGCAC	1 cut(s)	1103
AlwI	GGATC	1 cut(s)	388
Ama87I	CYCGRG	1 cut(s)	1255
Aor13HI	TCCGGA	1 cut(s)	1041
AoxI	GGCC	6 cut(s)	115, 127, 643, 705, 1124, 1275
ApaLI	GTGCAC	1 cut(s)	1103
ApeKI	GCWGC	3 cut(s)	33, 917, 933
ApoI	RAATTY	5 cut(s)	82, 518, 654, 879, 1339
ArsI	GACNNNNNNTTYG	2 cut(s)	503, 535
Asp700I	GAANNNNTTC	1 cut(s)	1049
AspA2I	CCTAGG	1 cut(s)	820
AspLEI	GCGC	3 cut(s)	499, 952, 1021
AspS9I	GGNCC	6 cut(s)	189, 330, 643, 737, 1012, 1259
AsuC2I	CCSGG	6 cut(s)	378, 541, 651, 1016, 1263, 1279
AsuHPI	GGTGA	4 cut(s)	97, 499, 752, 1297
AsuII	TTCGAA	1 cut(s)	1184
AvaI	CYCGRG	1 cut(s)	1255
AvaII	GGWCC	5 cut(s)	189, 330, 737, 1012, 1259
AvrII	CCTAGG	1 cut(s)	820
BaeGI	GKGCMC	2 cut(s)	828, 1107
BalI	TGGCCA	1 cut(s)	707
BanI	GGYRCC	2 cut(s)	496, 825
BanII	GRGCYC	1 cut(s)	161
BauI	CACGAG	1 cut(s)	144
BbrPI	CACGTG	1 cut(s)	125
Bbv12I	GWGCWC	2 cut(s)	161, 1107
BbvI	GCAGC	3 cut(s)	45, 904, 920
BccI	CCATC	4 cut(s)	418, 601, 806, 947
BcgI	CGANNNNNNTGC	2 cut(s)	968, 1002
BciT130I	CCWGG	2 cut(s)	328, 764
BclI	TGATCA	1 cut(s)	790
BcnI	CCSGG	6 cut(s)	378, 541, 651, 1016, 1263, 1279
BcoDI	GTCTC	2 cut(s)	232, 345
BfaI	CTAG	3 cut(s)	572, 821, 1375
BfmI	CTRYAG	1 cut(s)	1162
BfoI	RGCGCY	1 cut(s)	500
BglI	GCCNNNNNGGC	1 cut(s)	995
BisI	GCNGC	7 cut(s)	27, 34, 54, 150, 495, 918, 934
BlnI	CCTAGG	1 cut(s)	820
BlsI	GCNGC	7 cut(s)	28, 35, 55, 151, 496, 919, 935
Bme1390I	CCNGG	8 cut(s)	328, 378, 541, 651, 764, 1016, 1263, 1279
Bme18I	GGWCC	5 cut(s)	189, 330, 737, 1012, 1259
BmeRI	GACNNNNNGTC	2 cut(s)	187, 322
BmeT110I	CYCGRG	1 cut(s)	1255
BmgBI	CACGTC	1 cut(s)	433
BmgT120I	GGNCC	6 cut(s)	189, 330, 643, 737, 1012, 1259
BmiI	GGNNCC	9 cut(s)	332, 366, 498, 567, 738, 739, 827, 1014, 1260
BmrFI	CCNGG	8 cut(s)	328, 378, 541, 651, 764, 1016, 1263, 1279
BmrI	ACTGGG	1 cut(s)	211
BmuI	ACTGGG	1 cut(s)	211
BpmI	CTGGAG	2 cut(s)	253, 381
Bpu10I	CCTNAGC	1 cut(s)	281
Bpu14I	TTCGAA	1 cut(s)	1184
BpuMI	CCSGG	6 cut(s)	378, 541, 651, 1016, 1263, 1279
BsaAI	YACGTR	1 cut(s)	125
BsaHI	GRCGYC	3 cut(s)	497, 714, 744
BsaJI	CCNNGG	9 cut(s)	261, 540, 678, 820, 847, 953, 1127, 1202, 1262
BsaWI	WCCGGW	3 cut(s)	468, 1041, 1306
Bsc4I	CCNNNNNNNGG	7 cut(s)	327, 730, 754, 769, 974, 1021, 1306
Bse118I	RCCGGY	1 cut(s)	29
Bse1I	ACTGG	3 cut(s)	175, 217, 859
Bse3DI	GCAATG	2 cut(s)	895, 945
BseAI	TCCGGA	1 cut(s)	1041
BseBI	CCWGG	2 cut(s)	328, 764
BseDI	CCNNGG	9 cut(s)	261, 540, 678, 820, 847, 953, 1127, 1202, 1262
BseGI	GGATG	2 cut(s)	612, 939
BseLI	CCNNNNNNNGG	7 cut(s)	327, 730, 754, 769, 974, 1021, 1306
BseMI	GCAATG	2 cut(s)	895, 945
BseNI	ACTGG	3 cut(s)	175, 217, 859
BseRI	GAGGAG	1 cut(s)	1226
BseSI	GKGCMC	2 cut(s)	828, 1107
BseXI	GCAGC	3 cut(s)	45, 904, 920
BseYI	CCCAGC	1 cut(s)	747
BsgI	GTGCAG	1 cut(s)	919
Bsh1236I	CGCG	1 cut(s)	494
BshFI	GGCC	6 cut(s)	117, 129, 645, 707, 1126, 1277
BshNI	GGYRCC	2 cut(s)	496, 825
BsiHKAI	GWGCWC	2 cut(s)	161, 1107
BsiHKCI	CYCGRG	1 cut(s)	1255
BslFI	GGGAC	3 cut(s)	376, 723, 1272
BslI	CCNNNNNNNGG	7 cut(s)	327, 730, 754, 769, 974, 1021, 1306
BsmAI	GTCTC	2 cut(s)	232, 345
BsmBI	CGTCTC	2 cut(s)	232, 345
BsmFI	GGGAC	3 cut(s)	376, 723, 1272
BsmI	GAATGC	1 cut(s)	991
BsnI	GGCC	6 cut(s)	117, 129, 645, 707, 1126, 1277
BsoBI	CYCGRG	1 cut(s)	1255
Bsp119I	TTCGAA	1 cut(s)	1184
Bsp1286I	GDGCHC	3 cut(s)	161, 828, 1107
Bsp13I	TCCGGA	1 cut(s)	1041
Bsp1407I	TGTACA	1 cut(s)	1083
Bsp143I	GATC	4 cut(s)	288, 380, 779, 790
BspANI	GGCC	6 cut(s)	117, 129, 645, 707, 1126, 1277
BspEI	TCCGGA	1 cut(s)	1041
BspFNI	CGCG	1 cut(s)	494
BspLI	GGNNCC	9 cut(s)	332, 366, 498, 567, 738, 739, 827, 1014, 1260
BspPI	GGATC	1 cut(s)	388
BspT104I	TTCGAA	1 cut(s)	1184
BspT107I	GGYRCC	2 cut(s)	496, 825
BsrDI	GCAATG	2 cut(s)	895, 945
BsrFI	RCCGGY	1 cut(s)	29
BsrGI	TGTACA	1 cut(s)	1083
BsrI	ACTGG	3 cut(s)	175, 217, 859
BssAI	RCCGGY	1 cut(s)	29
BssECI	CCNNGG	9 cut(s)	261, 540, 678, 820, 847, 953, 1127, 1202, 1262
BssMI	GATC	4 cut(s)	288, 380, 779, 790
BssNI	GRCGYC	3 cut(s)	497, 714, 744
BssSI	CACGAG	1 cut(s)	144
BssT1I	CCWWGG	2 cut(s)	820, 1202
Bst2BI	CACGAG	1 cut(s)	144
Bst2UI	CCWGG	2 cut(s)	328, 764
Bst4CI	ACNGT	8 cut(s)	95, 262, 439, 619, 679, 788, 1150, 1163
Bst6I	CTCTTC	3 cut(s)	546, 572, 1062
BstACI	GRCGYC	3 cut(s)	497, 714, 744
BstAUI	TGTACA	1 cut(s)	1083
BstBAI	YACGTR	1 cut(s)	125
BstBI	TTCGAA	1 cut(s)	1184
BstC8I	GCNNGC	3 cut(s)	31, 647, 1023
BstDEI	CTNAG	1 cut(s)	281
BstDSI	CCRYGG	4 cut(s)	261, 678, 847, 1127
BstF5I	GGATG	2 cut(s)	612, 939
BstFNI	CGCG	1 cut(s)	494
BstH2I	RGCGCY	1 cut(s)	500
BstHHI	GCGC	3 cut(s)	499, 952, 1021
BstKTI	GATC	4 cut(s)	291, 383, 782, 793
BstMAI	GTCTC	2 cut(s)	232, 345
BstMBI	GATC	4 cut(s)	288, 380, 779, 790
BstMWI	GCNNNNNNNGC	5 cut(s)	42, 149, 491, 995, 1274
BstNI	CCWGG	2 cut(s)	328, 764
BstNSI	RCATGY	1 cut(s)	1319
BstSCI	CCNGG	8 cut(s)	326, 376, 539, 649, 762, 1014, 1261, 1277
BstSFI	CTRYAG	1 cut(s)	1162
BstSLI	GKGCMC	2 cut(s)	828, 1107
BstUI	CGCG	1 cut(s)	494
BstV1I	GCAGC	3 cut(s)	45, 904, 920
BsuRI	GGCC	6 cut(s)	117, 129, 645, 707, 1126, 1277
BtgI	CCRYGG	4 cut(s)	261, 678, 847, 1127
BtrI	CACGTC	1 cut(s)	433
BtsCI	GGATG	2 cut(s)	612, 939
BtsIMutI	CAGTG	1 cut(s)	793
Cac8I	GCNNGC	3 cut(s)	31, 647, 1023
CfoI	GCGC	3 cut(s)	499, 952, 1021
Cfr10I	RCCGGY	1 cut(s)	29
Cfr13I	GGNCC	6 cut(s)	189, 330, 643, 737, 1012, 1259
CseI	GACGC	3 cut(s)	703, 752, 1237
Csp6I	GTAC	8 cut(s)	91, 132, 172, 178, 202, 1072, 1084, 1310
CviAII	CATG	7 cut(s)	154, 235, 286, 703, 873, 1075, 1316
CviQI	GTAC	8 cut(s)	91, 132, 172, 178, 202, 1072, 1084, 1310
DdeI	CTNAG	1 cut(s)	281
DinI	GGCGCC	1 cut(s)	498
DpnI	GATC	4 cut(s)	290, 382, 781, 792
DpnII	GATC	4 cut(s)	288, 380, 779, 790
DriI	GACNNNNNGTC	2 cut(s)	187, 322
EaeI	YGGCCR	3 cut(s)	127, 705, 1275
Eam1104I	CTCTTC	3 cut(s)	546, 572, 1062
Eam1105I	GACNNNNNGTC	2 cut(s)	187, 322
EarI	CTCTTC	3 cut(s)	546, 572, 1062
EciI	GGCGGA	4 cut(s)	151, 181, 661, 1283
Ecl136II	GAGCTC	1 cut(s)	159
Eco130I	CCWWGG	2 cut(s)	820, 1202
Eco24I	GRGCYC	1 cut(s)	161
Eco47I	GGWCC	5 cut(s)	189, 330, 737, 1012, 1259
Eco53kI	GAGCTC	1 cut(s)	159
Eco72I	CACGTG	1 cut(s)	125
Eco88I	CYCGRG	1 cut(s)	1255
EcoICRI	GAGCTC	1 cut(s)	159
EcoO109I	RGGNCCY	1 cut(s)	737
EcoRII	CCWGG	2 cut(s)	326, 762
EcoT14I	CCWWGG	2 cut(s)	820, 1202
EcoT38I	GRGCYC	1 cut(s)	161
EgeI	GGCGCC	1 cut(s)	498
EheI	GGCGCC	1 cut(s)	498
ErhI	CCWWGG	2 cut(s)	820, 1202
Esp3I	CGTCTC	2 cut(s)	232, 345
FaeI	CATG	7 cut(s)	157, 238, 289, 706, 876, 1078, 1319
FaqI	GGGAC	3 cut(s)	376, 723, 1272
FatI	CATG	7 cut(s)	153, 234, 285, 702, 872, 1074, 1315
FauI	CCCGC	2 cut(s)	342, 727
FbaI	TGATCA	1 cut(s)	790
Fnu4HI	GCNGC	7 cut(s)	27, 34, 54, 150, 495, 918, 934
FokI	GGATG	2 cut(s)	619, 926
FriOI	GRGCYC	1 cut(s)	161
Fsp4HI	GCNGC	7 cut(s)	27, 34, 54, 150, 495, 918, 934
FspBI	CTAG	3 cut(s)	572, 821, 1375
GlaI	GCGC	3 cut(s)	498, 951, 1020
GluI	GCNGC	7 cut(s)	27, 34, 54, 150, 495, 918, 934
GsaI	CCCAGC	1 cut(s)	751
GsuI	CTGGAG	2 cut(s)	253, 381
HaeII	RGCGCY	1 cut(s)	500
HaeIII	GGCC	6 cut(s)	117, 129, 645, 707, 1126, 1277
HgaI	GACGC	3 cut(s)	703, 752, 1237
HhaI	GCGC	3 cut(s)	499, 952, 1021
Hin1I	GRCGYC	3 cut(s)	497, 714, 744
Hin1II	CATG	7 cut(s)	157, 238, 289, 706, 876, 1078, 1319
Hin6I	GCGC	3 cut(s)	497, 950, 1019
HinP1I	GCGC	3 cut(s)	497, 950, 1019
HinfI	GANTC	4 cut(s)	266, 357, 526, 1303
HphI	GGTGA	4 cut(s)	97, 499, 752, 1297
Hpy166II	GTNNAC	6 cut(s)	265, 490, 688, 760, 964, 1105
Hpy188I	TCNGA	8 cut(s)	10, 88, 311, 423, 511, 531, 779, 784
Hpy188III	TCNNGA	6 cut(s)	398, 523, 740, 1042, 1156, 1257
Hpy8I	GTNNAC	6 cut(s)	265, 490, 688, 760, 964, 1105
Hpy99I	CGWCG	3 cut(s)	698, 746, 1231
HpyAV	CCTTC	3 cut(s)	205, 1126, 1184
HpyCH4III	ACNGT	8 cut(s)	95, 262, 439, 619, 679, 788, 1150, 1163
HpyCH4IV	ACGT	2 cut(s)	124, 432
HpyCH4V	TGCA	6 cut(s)	444, 876, 936, 1105, 1325, 1336
HpyF10VI	GCNNNNNNNGC	5 cut(s)	42, 149, 491, 995, 1274
HpyF3I	CTNAG	1 cut(s)	281
HpySE526I	ACGT	2 cut(s)	124, 432
Hsp92I	GRCGYC	3 cut(s)	497, 714, 744
Hsp92II	CATG	7 cut(s)	157, 238, 289, 706, 876, 1078, 1319
HspAI	GCGC	3 cut(s)	497, 950, 1019
KasI	GGCGCC	1 cut(s)	496
KflI	GGGWCCC	1 cut(s)	737
Kpn2I	TCCGGA	1 cut(s)	1041
KroI	GCCGGC	1 cut(s)	29
KroNI	GCCGGC	1 cut(s)	31
Ksp22I	TGATCA	1 cut(s)	790
Kzo9I	GATC	4 cut(s)	288, 380, 779, 790
LmnI	GCTCC	1 cut(s)	164
Lsp1109I	GCAGC	3 cut(s)	45, 904, 920
MaeI	CTAG	3 cut(s)	572, 821, 1375
MaeII	ACGT	2 cut(s)	124, 432
MaeIII	GTNAC	5 cut(s)	370, 433, 464, 715, 991
MalI	GATC	4 cut(s)	290, 382, 781, 792
MboI	GATC	4 cut(s)	288, 380, 779, 790
MboII	GAAGA	5 cut(s)	283, 563, 589, 994, 1079
MhlI	GDGCHC	3 cut(s)	161, 828, 1107
MlsI	TGGCCA	1 cut(s)	707
MluCI	AATT	7 cut(s)	82, 518, 621, 654, 808, 879, 1339
MluNI	TGGCCA	1 cut(s)	707
Mly113I	GGCGCC	1 cut(s)	497
MlyI	GAGTC	1 cut(s)	260
MmeI	TCCRAC	2 cut(s)	33, 534
Mox20I	TGGCCA	1 cut(s)	707
MroI	TCCGGA	1 cut(s)	1041
MroNI	GCCGGC	1 cut(s)	29
MroXI	GAANNNNTTC	1 cut(s)	1049
MscI	TGGCCA	1 cut(s)	707
MseI	TTAA	4 cut(s)	246, 459, 561, 1092
MslI	CAYNNNNRTG	1 cut(s)	1320
Msp20I	TGGCCA	1 cut(s)	707
MspR9I	CCNGG	8 cut(s)	328, 378, 541, 651, 764, 1016, 1263, 1279
Mva1269I	GAATGC	1 cut(s)	991
MvaI	CCWGG	2 cut(s)	328, 764
MvnI	CGCG	1 cut(s)	494
MwoI	GCNNNNNNNGC	5 cut(s)	42, 149, 491, 995, 1274
NaeI	GCCGGC	1 cut(s)	31
NarI	GGCGCC	1 cut(s)	497
NciI	CCSGG	6 cut(s)	378, 541, 651, 1016, 1263, 1279
NdeII	GATC	4 cut(s)	288, 380, 779, 790
NgoMIV	GCCGGC	1 cut(s)	29
NlaIII	CATG	7 cut(s)	157, 238, 289, 706, 876, 1078, 1319
NlaIV	GGNNCC	9 cut(s)	332, 366, 498, 567, 738, 739, 827, 1014, 1260
NmeAIII	GCCGAG	2 cut(s)	893, 978
NmuCI	GTSAC	4 cut(s)	370, 433, 715, 991
NspI	RCATGY	1 cut(s)	1319
NspV	TTCGAA	1 cut(s)	1184
PctI	GAATGC	1 cut(s)	991
PdiI	GCCGGC	1 cut(s)	31
PdmI	GAANNNNTTC	1 cut(s)	1049
PfeI	GAWTC	3 cut(s)	357, 526, 1303
PflMI	CCANNNNNTGG	2 cut(s)	327, 769
PfoI	TCCNGGA	1 cut(s)	326
PkrI	GCNGC	7 cut(s)	28, 35, 55, 151, 496, 919, 935
PleI	GAGTC	1 cut(s)	260
PluTI	GGCGCC	1 cut(s)	500
PmaCI	CACGTG	1 cut(s)	125
PmlI	CACGTG	1 cut(s)	125
PpsI	GAGTC	1 cut(s)	260
Ppu21I	YACGTR	1 cut(s)	125
PpuMI	RGGWCCY	1 cut(s)	737
Psp124BI	GAGCTC	1 cut(s)	161
Psp5II	RGGWCCY	1 cut(s)	737
Psp6I	CCWGG	2 cut(s)	326, 762
PspCI	CACGTG	1 cut(s)	125
PspFI	CCCAGC	1 cut(s)	747
PspGI	CCWGG	2 cut(s)	326, 762
PspN4I	GGNNCC	9 cut(s)	332, 366, 498, 567, 738, 739, 827, 1014, 1260
PspPI	GGNCC	6 cut(s)	189, 330, 643, 737, 1012, 1259
PspPPI	RGGWCCY	1 cut(s)	737
PsrI	GAACNNNNNNTAC	2 cut(s)	393, 425
RsaI	GTAC	8 cut(s)	92, 133, 173, 179, 203, 1073, 1085, 1311
RsaNI	GTAC	8 cut(s)	91, 132, 172, 178, 202, 1072, 1084, 1310
RseI	CAYNNNNRTG	1 cut(s)	1320
SacI	GAGCTC	1 cut(s)	161
SaqAI	TTAA	4 cut(s)	246, 459, 561, 1092
SatI	GCNGC	7 cut(s)	27, 34, 54, 150, 495, 918, 934
Sau3AI	GATC	4 cut(s)	288, 380, 779, 790
Sau96I	GGNCC	6 cut(s)	189, 330, 643, 737, 1012, 1259
SchI	GAGTC	1 cut(s)	260
ScrFI	CCNGG	8 cut(s)	328, 378, 541, 651, 764, 1016, 1263, 1279
SduI	GDGCHC	3 cut(s)	161, 828, 1107
SetI	ASST	9 cut(s)	127, 161, 370, 435, 457, 567, 631, 665, 759
SfcI	CTRYAG	1 cut(s)	1162
SfoI	GGCGCC	1 cut(s)	498
SfuI	TTCGAA	1 cut(s)	1184
SinI	GGWCC	5 cut(s)	189, 330, 737, 1012, 1259
SmiMI	CAYNNNNRTG	1 cut(s)	1320
Sse9I	AATT	7 cut(s)	82, 518, 621, 654, 808, 879, 1339
SspDI	GGCGCC	1 cut(s)	496
SspMI	CTAG	3 cut(s)	572, 821, 1375
SstI	GAGCTC	1 cut(s)	161
StyD4I	CCNGG	8 cut(s)	326, 376, 539, 649, 762, 1014, 1261, 1277
StyI	CCWWGG	2 cut(s)	820, 1202
TaaI	ACNGT	8 cut(s)	95, 262, 439, 619, 679, 788, 1150, 1163
TaiI	ACGT	2 cut(s)	127, 435
TaqI	TCGA	6 cut(s)	69, 407, 659, 927, 1142, 1184
TaqII	GACCGA	1 cut(s)	359
TasI	AATT	7 cut(s)	82, 518, 621, 654, 808, 879, 1339
TatI	WGTACW	2 cut(s)	1071, 1083
TauI	GCSGC	4 cut(s)	29, 56, 152, 497
TfiI	GAWTC	3 cut(s)	357, 526, 1303
Tru1I	TTAA	4 cut(s)	246, 459, 561, 1092
Tru9I	TTAA	4 cut(s)	246, 459, 561, 1092
TscAI	CASTG	1 cut(s)	793
TseFI	GTSAC	4 cut(s)	370, 433, 715, 991
TseI	GCWGC	3 cut(s)	33, 917, 933
Tsp45I	GTSAC	4 cut(s)	370, 433, 715, 991
TspDTI	ATGAA	5 cut(s)	232, 564, 691, 1042, 1091
TspGWI	ACGGA	4 cut(s)	369, 1025, 1074, 1079
TspRI	CASTG	1 cut(s)	793
Van91I	CCANNNNNTGG	2 cut(s)	327, 769
VneI	GTGCAC	1 cut(s)	1103
VpaK11BI	GGWCC	5 cut(s)	189, 330, 737, 1012, 1259
XapI	RAATTY	5 cut(s)	82, 518, 654, 879, 1339
XceI	RCATGY	1 cut(s)	1319
XmaJI	CCTAGG	1 cut(s)	820
XmnI	GAANNNNTTC	1 cut(s)	1049
XspI	CTAG	3 cut(s)	572, 821, 1375

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.