Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp02

Orthogroup ID

OG0005137

Physical Location & Seq

Genomic Coordinates Reverse (-)

20580150 .. 20583063

Gene Structure 2914 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.2G150900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 447 bp

ATGGCTGGAGTAGCCCAAGCGCCGAAGAGAGCACTAGCTCCACAGGGAAGAGGTCTTCGCTCTCCTCCTCGCCCTCGCTTTGCGCCAGTCGATCGCGAAAAGACTTGTCCCCTGTTGCTTCGAGTTTTCACTAAGGTTGGAAGTCATCATACCAATGAAGATTTTGCAGTGAGAGGAAAGGAGCCTAAGGATGAAGTTCAAATTTATACATGGAAAGATGCTAATCTTCGCGAGTTAACTGATCTGGTGAAAGAGGTTGCTCCTGCAGCTAGAAGGAGAAATGCGAAACTGTCCTTTGCTATTGTATATCCAGATAGGCATGGCCATTTCGTGGTCAAAGAGGTGGGGAGGACGCTTTCTTATGGAAATGGAAGATTAGATGATGCCAAAGTTTTGGCTGAACTTGGCTTTGCGATTGGAGATTACTTGGATGTGGCGATTATGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000118 GO:0000228 GO:0000375 GO:0000377 GO:0000381 GO:0000398 GO:0000785 GO:0000790 GO:0001101 GO:0003674 GO:0003712 GO:0003714 GO:0003824 GO:0004407 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005667 GO:0005694 GO:0005730 GO:0005737 GO:0005829 GO:0006139 GO:0006325 GO:0006342 GO:0006355 GO:0006357 GO:0006396 GO:0006397 GO:0006464 GO:0006476 GO:0006725 GO:0006807 GO:0006950 GO:0006970 GO:0006996 GO:0008134 GO:0008150 GO:0008152 GO:0008380 GO:0009628 GO:0009651 GO:0009719 GO:0009725 GO:0009737 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010033 GO:0010467 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0010941 GO:0010942 GO:0016043 GO:0016070 GO:0016071 GO:0016458 GO:0016569 GO:0016570 GO:0016575 GO:0016580 GO:0016604 GO:0016607 GO:0016787 GO:0016810 GO:0016811 GO:0019213 GO:0019219 GO:0019222 GO:0019538 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031974 GO:0031981 GO:0032991 GO:0033119 GO:0033558 GO:0033993 GO:0034641 GO:0035601 GO:0036211 GO:0040029 GO:0042221 GO:0042981 GO:0043065 GO:0043067 GO:0043068 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043412 GO:0043484 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044444 GO:0044446 GO:0044451 GO:0044454 GO:0044464 GO:0045292 GO:0045814 GO:0045892 GO:0045934 GO:0046483 GO:0048024 GO:0048025 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0050684 GO:0050686 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051172 GO:0051252 GO:0051253 GO:0051276 GO:0060255 GO:0061574 GO:0065007 GO:0070013 GO:0070822 GO:0071704 GO:0071840 GO:0080090 GO:0090304 GO:0097305 GO:0098732 GO:0140096 GO:0140110 GO:1901360 GO:1901564 GO:1901700 GO:1902494 GO:1902679 GO:1903311 GO:1903312 GO:1903506 GO:1903507 GO:2000112 GO:2000113 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko03013 ko03015 map03013 map03015

Pfam Domains

Protein Families

SAP18

Protein Analysis

149

Amino Acids

16.49

Weight (kDa)

9.75

Isoelectric Point (pI)

32.32

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005137)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G45640 AT2G45640
fragaria_vesca	FvH4_5g01190 FvH4_7g12660
malus_domestica	MD02G1197700.v1.1 MD04G1070900.v1.1
prunus_persica	Prupe.2G150900_v2.0.a1 Prupe.5G087000_v2.0.a1
pyrus_communis	pycom02g16140 pycom04g06410
rosa_chinensis	RchiOBHm_Chr1g0351651 RchiOBHm_Chr7g0199901
rosa_laevigata	RLG00000003761 RLG00000028392
rosa_multiflora	Rmu_co8389151.1_g000001 Rmu_sc0001144.1_g000006 Rmu_sc0002748.1_g000010
rosa_roxburghii	Rroxscaffold_3G00256390
rosa_rugosa	Rorug01G0219900 Rorug01G0220000 Rorug07G0057000
rosa_samantha	Rh1AG234400 Rh1BG205000 Rh1CG219100 Rh1DG232000 Rh7AG182300 Rh7CG191800 Rh7DG185100
rosa_wichuraiana	Rw1G020410 Rw7G015990

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	331
AccII	CGCG	2 cut(s)	96, 231
AcoI	YGGCCR	1 cut(s)	322
AcsI	RAATTY	1 cut(s)	201
AfiI	CCNNNNNNNGG	1 cut(s)	331
AgsI	TTSAA	1 cut(s)	200
AluBI	AGCT	2 cut(s)	38, 269
AluI	AGCT	2 cut(s)	38, 269
Alw21I	GWGCWC	1 cut(s)	34
AoxI	GGCC	1 cut(s)	322
ApeKI	GCWGC	1 cut(s)	266
ApoI	RAATTY	1 cut(s)	201
AspLEI	GCGC	2 cut(s)	22, 85
AsuHPI	GGTGA	1 cut(s)	259
AxyI	CCTNAGG	1 cut(s)	186
BalI	TGGCCA	1 cut(s)	324
BarI	GAAGNNNNNNTAC	2 cut(s)	133, 165
BbsI	GAAGAC	1 cut(s)	47
Bbv12I	GWGCWC	1 cut(s)	34
BbvI	GCAGC	1 cut(s)	278
BfaI	CTAG	2 cut(s)	35, 270
BfmI	CTRYAG	1 cut(s)	264
BfoI	RGCGCY	1 cut(s)	23
BisI	GCNGC	1 cut(s)	267
BlsI	GCNGC	1 cut(s)	268
BmiI	GGNNCC	1 cut(s)	183
BmsI	GCATC	2 cut(s)	208, 373
BpiI	GAAGAC	1 cut(s)	47
BpmI	CTGGAG	1 cut(s)	27
BsaBI	GATNNNNATC	1 cut(s)	222
Bsc4I	CCNNNNNNNGG	1 cut(s)	331
Bse1I	ACTGG	1 cut(s)	86
Bse21I	CCTNAGG	1 cut(s)	186
Bse8I	GATNNNNATC	1 cut(s)	222
BseGI	GGATG	2 cut(s)	196, 436
BseJI	GATNNNNATC	1 cut(s)	222
BseLI	CCNNNNNNNGG	1 cut(s)	331
BseNI	ACTGG	1 cut(s)	86
BseRI	GAGGAG	2 cut(s)	54, 57
BseXI	GCAGC	1 cut(s)	278
Bsh1236I	CGCG	2 cut(s)	96, 231
Bsh1285I	CGRYCG	1 cut(s)	94
BshFI	GGCC	1 cut(s)	324
BsiEI	CGRYCG	1 cut(s)	94
BsiHKAI	GWGCWC	1 cut(s)	34
BslFI	GGGAC	1 cut(s)	93
BslI	CCNNNNNNNGG	1 cut(s)	331
BsmFI	GGGAC	1 cut(s)	93
BsnI	GGCC	1 cut(s)	324
Bsp1286I	GDGCHC	1 cut(s)	34
Bsp143I	GATC	2 cut(s)	91, 241
Bsp68I	TCGCGA	2 cut(s)	96, 231
BspANI	GGCC	1 cut(s)	324
BspFNI	CGCG	2 cut(s)	96, 231
BspLI	GGNNCC	1 cut(s)	183
BspMAI	CTGCAG	1 cut(s)	268
BsrI	ACTGG	1 cut(s)	86
BssMI	GATC	2 cut(s)	91, 241
Bst4CI	ACNGT	1 cut(s)	291
Bst6I	CTCTTC	2 cut(s)	20, 43
BstDEI	CTNAG	2 cut(s)	132, 186
BstF5I	GGATG	2 cut(s)	196, 436
BstFNI	CGCG	2 cut(s)	96, 231
BstH2I	RGCGCY	1 cut(s)	23
BstHHI	GCGC	2 cut(s)	22, 85
BstKTI	GATC	2 cut(s)	94, 244
BstMBI	GATC	2 cut(s)	91, 241
BstMCI	CGRYCG	1 cut(s)	94
BstMWI	GCNNNNNNNGC	2 cut(s)	11, 266
BstSFI	CTRYAG	1 cut(s)	264
BstUI	CGCG	2 cut(s)	96, 231
BstV1I	GCAGC	1 cut(s)	278
BstV2I	GAAGAC	1 cut(s)	47
BstXI	CCANNNNNNTGG	1 cut(s)	394
Bsu36I	CCTNAGG	1 cut(s)	186
BsuRI	GGCC	1 cut(s)	324
BtsCI	GGATG	2 cut(s)	196, 436
BtsI	GCAGTG	1 cut(s)	174
BtsIMutI	CAGTG	1 cut(s)	174
BtuMI	TCGCGA	2 cut(s)	96, 231
CfoI	GCGC	2 cut(s)	22, 85
CseI	GACGC	1 cut(s)	361
CviAII	CATG	2 cut(s)	210, 320
CviJI	RGCY	8 cut(s)	5, 14, 38, 184, 269, 324, 398, 408
CviKI_1	RGCY	8 cut(s)	5, 14, 38, 184, 269, 324, 398, 408
DdeI	CTNAG	2 cut(s)	132, 186
DpnI	GATC	2 cut(s)	93, 243
DpnII	GATC	2 cut(s)	91, 241
EaeI	YGGCCR	1 cut(s)	322
Eam1104I	CTCTTC	2 cut(s)	20, 43
EarI	CTCTTC	2 cut(s)	20, 43
Eco81I	CCTNAGG	1 cut(s)	186
FaeI	CATG	2 cut(s)	213, 323
FaiI	YATR	7 cut(s)	150, 207, 211, 307, 321, 363, 443
FaqI	GGGAC	1 cut(s)	93
FatI	CATG	2 cut(s)	209, 319
Fnu4HI	GCNGC	1 cut(s)	267
FokI	GGATG	2 cut(s)	203, 443
Fsp4HI	GCNGC	1 cut(s)	267
FspBI	CTAG	2 cut(s)	35, 270
GlaI	GCGC	2 cut(s)	21, 84
GluI	GCNGC	1 cut(s)	267
GsuI	CTGGAG	1 cut(s)	27
HaeII	RGCGCY	1 cut(s)	23
HaeIII	GGCC	1 cut(s)	324
HgaI	GACGC	1 cut(s)	361
HhaI	GCGC	2 cut(s)	22, 85
Hin1II	CATG	2 cut(s)	213, 323
Hin6I	GCGC	2 cut(s)	20, 83
HinP1I	GCGC	2 cut(s)	20, 83
HincII	GTYRAC	1 cut(s)	237
HindII	GTYRAC	1 cut(s)	237
HpaI	GTTAAC	1 cut(s)	237
HphI	GGTGA	1 cut(s)	259
Hpy166II	GTNNAC	1 cut(s)	237
Hpy188III	TCNNGA	3 cut(s)	95, 230, 311
Hpy8I	GTNNAC	1 cut(s)	237
HpyAV	CCTTC	1 cut(s)	267
HpyCH4III	ACNGT	1 cut(s)	291
HpyCH4V	TGCA	2 cut(s)	167, 266
HpyF10VI	GCNNNNNNNGC	2 cut(s)	11, 266
HpyF3I	CTNAG	2 cut(s)	132, 186
Hsp92II	CATG	2 cut(s)	213, 323
HspAI	GCGC	2 cut(s)	20, 83
KspAI	GTTAAC	1 cut(s)	237
Kzo9I	GATC	2 cut(s)	91, 241
LmnI	GCTCC	3 cut(s)	43, 181, 265
LpnPI	CCDG	6 cut(s)	29, 99, 125, 230, 276, 324
Lsp1109I	GCAGC	1 cut(s)	278
LweI	GCATC	2 cut(s)	208, 373
MaeI	CTAG	2 cut(s)	35, 270
MalI	GATC	2 cut(s)	93, 243
MboI	GATC	2 cut(s)	91, 241
MboII	GAAGA	6 cut(s)	37, 47, 60, 170, 218, 384
MhlI	GDGCHC	1 cut(s)	34
MlsI	TGGCCA	1 cut(s)	324
MluCI	AATT	1 cut(s)	201
MluNI	TGGCCA	1 cut(s)	324
MmeI	TCCRAC	1 cut(s)	118
MnlI	CCTC	8 cut(s)	44, 75, 78, 84, 167, 247, 334, 342
Mox20I	TGGCCA	1 cut(s)	324
MscI	TGGCCA	1 cut(s)	324
MseI	TTAA	1 cut(s)	236
MslI	CAYNNNNRTG	1 cut(s)	153
Msp20I	TGGCCA	1 cut(s)	324
MvnI	CGCG	2 cut(s)	96, 231
MwoI	GCNNNNNNNGC	2 cut(s)	11, 266
NdeII	GATC	2 cut(s)	91, 241
NlaIII	CATG	2 cut(s)	213, 323
NlaIV	GGNNCC	1 cut(s)	183
NruI	TCGCGA	2 cut(s)	96, 231
PflMI	CCANNNNNTGG	1 cut(s)	331
PkrI	GCNGC	1 cut(s)	268
Ple19I	CGATCG	1 cut(s)	94
PspN4I	GGNNCC	1 cut(s)	183
PstI	CTGCAG	1 cut(s)	268
PvuI	CGATCG	1 cut(s)	94
RruI	TCGCGA	2 cut(s)	96, 231
RseI	CAYNNNNRTG	1 cut(s)	153
SaqAI	TTAA	1 cut(s)	236
SatI	GCNGC	1 cut(s)	267
Sau3AI	GATC	2 cut(s)	91, 241
SduI	GDGCHC	1 cut(s)	34
SetI	ASST	6 cut(s)	40, 55, 138, 258, 271, 345
SfaNI	GCATC	2 cut(s)	208, 373
SfcI	CTRYAG	1 cut(s)	264
SmiMI	CAYNNNNRTG	1 cut(s)	153
Sse9I	AATT	1 cut(s)	201
SspMI	CTAG	2 cut(s)	35, 270
TaaI	ACNGT	1 cut(s)	291
TaqI	TCGA	2 cut(s)	90, 121
TasI	AATT	1 cut(s)	201
Tru1I	TTAA	1 cut(s)	236
Tru9I	TTAA	1 cut(s)	236
TscAI	CASTG	1 cut(s)	174
TseI	GCWGC	1 cut(s)	266
TspDTI	ATGAA	2 cut(s)	171, 207
TspRI	CASTG	1 cut(s)	174
Van91I	CCANNNNNTGG	1 cut(s)	331
XapI	RAATTY	1 cut(s)	201
XspI	CTAG	2 cut(s)	35, 270

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.