Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp02

Orthogroup ID

OG0004496

Physical Location & Seq

Genomic Coordinates Forward (+)

21310934 .. 21315160

Gene Structure 4227 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.2G162500.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1251 bp

ATGGCTGCCGCTGCCCAAATGCAAGAAGAAGATGAAAACGCCACCTTCTTCGTAGCGGTTCACGTCGGCGCGGGATACCACGCGCCTTCCAACGAGAAAGCCCTCAGGTCCGCCATCAAACGCGCTTGTCTCGCCGCCGCCTCCCTTCTCCGCAAGGGTTCTGGTAGATGCATAGATGCTGTTACGGCTGCTATTCAAGTCTTGGAGGATGACCCAAGCACGAATGCGGGTAGAGGCTCCAATTTGACAGAAGATGGTCATGTAGAATGCGATGCCAGTATTATGGATGGAAGTTCTGGAGTTTTTGGAGCTGTTGGAGCAATTCCAGGTGTCAGAAACCCCATCCAGGTTGCTGCTTTATTGGCCAAGGAGCAAATGATGGGATCCTCTCTGTTGGGCCGAATACCTCCCATCTTCCTGGTTGGTGAAGGTGCCCGCATATGGGCAAAGTCCAAGGGCATTGCTTTGACATCAAGCACGCCAGCTGCTGATGAGTGGCTGGTGACAGAAAGGGCAAAAGCACAATGGAAAAAGTACAAAGCAATGGTAGATGATGCAAAAGGAAAGACAGAAAATTCTGCTTTTGGACTTTCTTGCTGTCCTCAAGAGACTGCTGGAATGTCAGAATTAGAAGCTCAACCATGTGATTCTTTGAAGAGTAATGGGGCTGAAGATGATTGCGTCATGGACACTGTTGGAGTTATTTGTGTGGATGCTGAAGGACAAATAGCTTCTGGTGCCTCAAGTGGGGGTATTGCTCTGAAGGTTGGTGGCCGAGTGGGATTAGCAGCAATGCATGGTTCAGGCTGTTGGGCATCCTCCAAAGGTCTTTTTGGGGCGCCATGTATAGTTGGCTGTTGTGTAAGTGGTGCTGGAGAATATCTAATGAAGGGATTTGCAGCTCGGGAGTGCTGCGTCTCTTTGTCACTTTCACAGGCAGGTCCTGCCTCTGCTTGTATGAAAGTTTTACGCTCTGTTGTTCAAGAGAGTACTCATAATTGTACAGATAGAAGTGCTGGAATTCTACTTGTGCAAGCGGATGATCCCACAACACTTTCAGGAAGTTCTTCAAAGTTGAAAGCTGTAGAGATTGCAGCTGCTTACTCTTCCTTATCCTTTGGAATAGGATACTTTGGAAGCTCTATGGAGCGGCCCAAGGTTTCAATTCTTAGGAGTACAAAATTGCAAAGCAAAACTGGTGTGGACCATTTCGAAGCGCGAATTGACCTTACTGGTGGAAAGCTGCTATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Asparaginase_2

Protein Analysis

417

Amino Acids

42.8

Weight (kDa)

5.94

Isoelectric Point (pI)

35.3

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0004496)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G00590 AT4G00590
fragaria_vesca	FvH4_7g13631 FvH4_7g13631
malus_domestica	MD01G1053500.v1.1 MD01G1053600.v1.1 MD07G1141600.v1.1
prunus_persica	Prupe.2G162500_v2.0.a1 Prupe.2G162500_v2.0.a1 Prupe.2G162500_v2.0.a1 Prupe.2G162500_v2.0.a1 Prupe.2G162500_v2.0.a1 Prupe.2G162500_v2.0.a1 Prupe.8G034000_v2.0.a1
pyrus_communis	pycom01g07920 pycom07g14050
rosa_chinensis	RchiOBHm_Chr1g0353681 RchiOBHm_Chr1g0353691
rosa_laevigata	RLG00000028242 RLG00000028265 RLG00000029492 RLG00000029775
rosa_multiflora	Rmu_sc0001849.1_g000001
rosa_roxburghii	Rroxscaffold_4G00301740
rosa_rugosa	Rorug01G0237100
rosa_samantha	Rh1AG249300 Rh1BG219400 Rh1CG099800 Rh1CG232000 Rh1DG107100 Rh1DG246400
rosa_wichuraiana	Rw1G021730

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	929
AccB1I	GGYRCC	3 cut(s)	431, 737, 838
AccBSI	CCGCTC	1 cut(s)	1150
AccII	CGCG	4 cut(s)	71, 83, 123, 1219
AclWI	GGATC	3 cut(s)	378, 391, 1037
AcoI	YGGCCR	2 cut(s)	363, 772
AcsI	RAATTY	2 cut(s)	574, 1020
AcuI	CTGAAG	3 cut(s)	690, 738, 782
AcyI	GRCGYC	1 cut(s)	839
AfaI	GTAC	4 cut(s)	536, 991, 1003, 1177
AfiI	CCNNNNNNNGG	4 cut(s)	346, 441, 442, 747
AgsI	TTSAA	6 cut(s)	197, 655, 983, 1071, 1078, 1164
AjiI	CACGTC	1 cut(s)	64
AjnI	CCWGG	3 cut(s)	325, 345, 417
AluBI	AGCT	9 cut(s)	311, 485, 635, 731, 902, 1082, 1097, 1140, 1243
AluI	AGCT	9 cut(s)	311, 485, 635, 731, 902, 1082, 1097, 1140, 1243
Alw26I	GTCTC	3 cut(s)	134, 602, 922
AlwI	GGATC	3 cut(s)	378, 391, 1037
AlwNI	CAGNNNCTG	2 cut(s)	488, 944
Ama87I	CYCGRG	1 cut(s)	903
AoxI	GGCC	4 cut(s)	363, 397, 772, 1151
ApoI	RAATTY	2 cut(s)	574, 1020
Asp700I	GAANNNNTTC	1 cut(s)	1066
AspLEI	GCGC	5 cut(s)	71, 85, 125, 841, 1219
AspS9I	GGNCC	5 cut(s)	108, 397, 941, 1152, 1204
AsuHPI	GGTGA	2 cut(s)	437, 514
AsuII	TTCGAA	1 cut(s)	1212
AvaI	CYCGRG	1 cut(s)	903
AvaII	GGWCC	3 cut(s)	108, 941, 1204
AxyI	CCTNAGG	1 cut(s)	104
BaeGI	GKGCMC	1 cut(s)	436
BalI	TGGCCA	1 cut(s)	365
BamHI	GGATCC	1 cut(s)	383
BanI	GGYRCC	3 cut(s)	431, 737, 838
BbvI	GCAGC	9 cut(s)	175, 340, 472, 800, 899, 911, 1084, 1106, 1230
BccI	CCATC	6 cut(s)	122, 248, 281, 350, 373, 419
BceAI	ACGGC	1 cut(s)	201
BciT130I	CCWGG	3 cut(s)	327, 347, 419
BciVI	GTATCC	2 cut(s)	68, 1121
BcoDI	GTCTC	3 cut(s)	134, 602, 922
BfmI	CTRYAG	1 cut(s)	1083
BfoI	RGCGCY	1 cut(s)	842
BfuAI	ACCTGC	1 cut(s)	929
BfuI	GTATCC	2 cut(s)	68, 1121
BmcAI	AGTACT	1 cut(s)	991
Bme1390I	CCNGG	3 cut(s)	327, 347, 419
Bme18I	GGWCC	3 cut(s)	108, 941, 1204
BmeT110I	CYCGRG	1 cut(s)	903
BmgBI	CACGTC	1 cut(s)	64
BmgT120I	GGNCC	5 cut(s)	108, 397, 941, 1152, 1204
BmiI	GGNNCC	5 cut(s)	238, 385, 433, 739, 840
BmrFI	CCNGG	3 cut(s)	327, 347, 419
BmsI	GCATC	6 cut(s)	158, 166, 262, 544, 703, 824
BpmI	CTGGAG	2 cut(s)	318, 894
Bpu14I	TTCGAA	1 cut(s)	1212
BpuEI	CTTGAG	2 cut(s)	588, 727
BsaHI	GRCGYC	1 cut(s)	839
BsaJI	CCNNGG	3 cut(s)	366, 453, 1155
Bsc4I	CCNNNNNNNGG	4 cut(s)	346, 441, 442, 747
Bse1I	ACTGG	3 cut(s)	276, 1201, 1237
Bse21I	CCTNAGG	1 cut(s)	104
Bse3DI	GCAATG	3 cut(s)	459, 549, 798
BseBI	CCWGG	3 cut(s)	327, 347, 419
BseDI	CCNNGG	3 cut(s)	366, 453, 1155
BseGI	GGATG	6 cut(s)	214, 292, 342, 718, 815, 1045
BseLI	CCNNNNNNNGG	4 cut(s)	346, 441, 442, 747
BseMI	GCAATG	3 cut(s)	459, 549, 798
BseMII	CTCAG	1 cut(s)	118
BseNI	ACTGG	3 cut(s)	276, 1201, 1237
BseSI	GKGCMC	1 cut(s)	436
BseXI	GCAGC	9 cut(s)	175, 340, 472, 800, 899, 911, 1084, 1106, 1230
Bsh1236I	CGCG	4 cut(s)	71, 83, 123, 1219
BshFI	GGCC	4 cut(s)	365, 399, 774, 1153
BshNI	GGYRCC	3 cut(s)	431, 737, 838
BsiHKCI	CYCGRG	1 cut(s)	903
BslI	CCNNNNNNNGG	4 cut(s)	346, 441, 442, 747
BsmAI	GTCTC	3 cut(s)	134, 602, 922
BsmBI	CGTCTC	1 cut(s)	922
BsmI	GAATGC	2 cut(s)	229, 272
BsnI	GGCC	4 cut(s)	365, 399, 774, 1153
BsoBI	CYCGRG	1 cut(s)	903
Bsp119I	TTCGAA	1 cut(s)	1212
Bsp1286I	GDGCHC	1 cut(s)	436
Bsp1407I	TGTACA	1 cut(s)	1001
Bsp143I	GATC	2 cut(s)	383, 1042
BspANI	GGCC	4 cut(s)	365, 399, 774, 1153
BspCNI	CTCAG	1 cut(s)	117
BspFNI	CGCG	4 cut(s)	71, 83, 123, 1219
BspLI	GGNNCC	5 cut(s)	238, 385, 433, 739, 840
BspMI	ACCTGC	1 cut(s)	929
BspPI	GGATC	3 cut(s)	378, 391, 1037
BspT104I	TTCGAA	1 cut(s)	1212
BspT107I	GGYRCC	3 cut(s)	431, 737, 838
BsrBI	CCGCTC	1 cut(s)	1150
BsrDI	GCAATG	3 cut(s)	459, 549, 798
BsrGI	TGTACA	1 cut(s)	1001
BsrI	ACTGG	3 cut(s)	276, 1201, 1237
BssECI	CCNNGG	3 cut(s)	366, 453, 1155
BssMI	GATC	2 cut(s)	383, 1042
BssNI	GRCGYC	1 cut(s)	839
BssT1I	CCWWGG	3 cut(s)	366, 453, 1155
Bst2UI	CCWGG	3 cut(s)	327, 347, 419
Bst4CI	ACNGT	1 cut(s)	694
Bst6I	CTCTTC	2 cut(s)	650, 1111
BstACI	GRCGYC	1 cut(s)	839
BstAPI	GCANNNNNTGC	1 cut(s)	944
BstAUI	TGTACA	1 cut(s)	1001
BstBI	TTCGAA	1 cut(s)	1212
BstC8I	GCNNGC	4 cut(s)	436, 479, 483, 1035
BstDEI	CTNAG	2 cut(s)	104, 1169
BstF5I	GGATG	6 cut(s)	214, 292, 342, 718, 815, 1045
BstFNI	CGCG	4 cut(s)	71, 83, 123, 1219
BstH2I	RGCGCY	1 cut(s)	842
BstHHI	GCGC	5 cut(s)	71, 85, 125, 841, 1219
BstKTI	GATC	2 cut(s)	386, 1045
BstMAI	GTCTC	3 cut(s)	134, 602, 922
BstMBI	GATC	2 cut(s)	383, 1042
BstMWI	GCNNNNNNNGC	7 cut(s)	11, 131, 185, 317, 362, 737, 944
BstNI	CCWGG	3 cut(s)	327, 347, 419
BstSCI	CCNGG	3 cut(s)	325, 345, 417
BstSFI	CTRYAG	1 cut(s)	1083
BstSLI	GKGCMC	1 cut(s)	436
BstUI	CGCG	4 cut(s)	71, 83, 123, 1219
BstV1I	GCAGC	9 cut(s)	175, 340, 472, 800, 899, 911, 1084, 1106, 1230
BstX2I	RGATCY	1 cut(s)	383
BstXI	CCANNNNNNTGG	2 cut(s)	283, 418
BstYI	RGATCY	1 cut(s)	383
Bsu36I	CCTNAGG	1 cut(s)	104
BsuI	GTATCC	2 cut(s)	68, 1121
BsuRI	GGCC	4 cut(s)	365, 399, 774, 1153
BtgZI	GCGATG	1 cut(s)	285
BtrI	CACGTC	1 cut(s)	64
BtsCI	GGATG	6 cut(s)	214, 292, 342, 718, 815, 1045
BtsIMutI	CAGTG	1 cut(s)	690
BveI	ACCTGC	1 cut(s)	929
Cac8I	GCNNGC	4 cut(s)	436, 479, 483, 1035
CaiI	CAGNNNCTG	2 cut(s)	488, 944
CfoI	GCGC	5 cut(s)	71, 85, 125, 841, 1219
Cfr13I	GGNCC	5 cut(s)	108, 397, 941, 1152, 1204
CseI	GACGC	2 cut(s)	670, 904
Csp6I	GTAC	4 cut(s)	535, 990, 1002, 1176
CviAII	CATG	5 cut(s)	260, 642, 685, 797, 843
CviQI	GTAC	4 cut(s)	535, 990, 1002, 1176
DdeI	CTNAG	2 cut(s)	104, 1169
DinI	GGCGCC	1 cut(s)	840
DpnI	GATC	2 cut(s)	385, 1044
DpnII	GATC	2 cut(s)	383, 1042
EaeI	YGGCCR	2 cut(s)	363, 772
Eam1104I	CTCTTC	2 cut(s)	650, 1111
EarI	CTCTTC	2 cut(s)	650, 1111
EciI	GGCGGA	1 cut(s)	100
Eco130I	CCWWGG	3 cut(s)	366, 453, 1155
Eco47I	GGWCC	3 cut(s)	108, 941, 1204
Eco57I	CTGAAG	3 cut(s)	690, 738, 782
Eco81I	CCTNAGG	1 cut(s)	104
Eco88I	CYCGRG	1 cut(s)	903
EcoO109I	RGGNCCY	1 cut(s)	941
EcoRI	GAATTC	1 cut(s)	1020
EcoRII	CCWGG	3 cut(s)	325, 345, 417
EcoT14I	CCWWGG	3 cut(s)	366, 453, 1155
EcoT22I	ATGCAT	2 cut(s)	173, 798
EgeI	GGCGCC	1 cut(s)	840
EheI	GGCGCC	1 cut(s)	840
ErhI	CCWWGG	3 cut(s)	366, 453, 1155
Esp3I	CGTCTC	1 cut(s)	922
FaeI	CATG	5 cut(s)	263, 645, 688, 800, 846
FatI	CATG	5 cut(s)	259, 641, 684, 796, 842
FauI	CCCGC	3 cut(s)	64, 220, 443
FauNDI	CATATG	1 cut(s)	440
FokI	GGATG	6 cut(s)	221, 299, 329, 725, 802, 1052
GlaI	GCGC	5 cut(s)	70, 84, 124, 840, 1218
GsuI	CTGGAG	2 cut(s)	318, 894
HaeII	RGCGCY	1 cut(s)	842
HaeIII	GGCC	4 cut(s)	365, 399, 774, 1153
HgaI	GACGC	2 cut(s)	670, 904
HhaI	GCGC	5 cut(s)	71, 85, 125, 841, 1219
Hin1I	GRCGYC	1 cut(s)	839
Hin1II	CATG	5 cut(s)	263, 645, 688, 800, 846
Hin6I	GCGC	5 cut(s)	69, 83, 123, 839, 1217
HinP1I	GCGC	5 cut(s)	69, 83, 123, 839, 1217
HinfI	GANTC	1 cut(s)	647
HphI	GGTGA	2 cut(s)	437, 514
Hpy166II	GTNNAC	2 cut(s)	61, 1204
Hpy188I	TCNGA	3 cut(s)	335, 625, 762
Hpy188III	TCNNGA	5 cut(s)	297, 605, 905, 983, 1059
Hpy8I	GTNNAC	2 cut(s)	61, 1204
Hpy99I	CGWCG	1 cut(s)	68
HpyAV	CCTTC	7 cut(s)	55, 96, 155, 422, 713, 757, 883
HpyCH4III	ACNGT	1 cut(s)	694
HpyCH4IV	ACGT	1 cut(s)	63
HpyCH4V	TGCA	8 cut(s)	22, 171, 557, 796, 899, 1033, 1094, 1186
HpyF10VI	GCNNNNNNNGC	7 cut(s)	11, 131, 185, 317, 362, 737, 944
HpyF3I	CTNAG	2 cut(s)	104, 1169
HpySE526I	ACGT	1 cut(s)	63
Hsp92I	GRCGYC	1 cut(s)	839
Hsp92II	CATG	5 cut(s)	263, 645, 688, 800, 846
HspAI	GCGC	5 cut(s)	69, 83, 123, 839, 1217
KasI	GGCGCC	1 cut(s)	838
Kzo9I	GATC	2 cut(s)	383, 1042
LmnI	GCTCC	5 cut(s)	242, 308, 317, 370, 1147
Lsp1109I	GCAGC	9 cut(s)	175, 340, 472, 800, 899, 911, 1084, 1106, 1230
LweI	GCATC	6 cut(s)	158, 166, 262, 544, 703, 824
MaeII	ACGT	1 cut(s)	63
MaeIII	GTNAC	3 cut(s)	181, 502, 924
MalI	GATC	2 cut(s)	385, 1044
MbiI	CCGCTC	1 cut(s)	1150
MboI	GATC	2 cut(s)	383, 1042
MboII	GAAGA	9 cut(s)	38, 40, 41, 263, 406, 667, 683, 1059, 1098
MflI	RGATCY	1 cut(s)	383
MhlI	GDGCHC	1 cut(s)	436
MlsI	TGGCCA	1 cut(s)	365
MluCI	AATT	9 cut(s)	241, 321, 574, 626, 997, 1020, 1164, 1181, 1221
MluNI	TGGCCA	1 cut(s)	365
Mly113I	GGCGCC	1 cut(s)	839
MmeI	TCCRAC	3 cut(s)	114, 295, 676
Mox20I	TGGCCA	1 cut(s)	365
Mph1103I	ATGCAT	2 cut(s)	173, 798
MroXI	GAANNNNTTC	1 cut(s)	1066
MscI	TGGCCA	1 cut(s)	365
Msp20I	TGGCCA	1 cut(s)	365
MspA1I	CMGCKG	3 cut(s)	11, 485, 1097
MspR9I	CCNGG	3 cut(s)	327, 347, 419
Mva1269I	GAATGC	2 cut(s)	229, 272
MvaI	CCWGG	3 cut(s)	327, 347, 419
MvnI	CGCG	4 cut(s)	71, 83, 123, 1219
MwoI	GCNNNNNNNGC	7 cut(s)	11, 131, 185, 317, 362, 737, 944
NarI	GGCGCC	1 cut(s)	839
NdeI	CATATG	1 cut(s)	440
NdeII	GATC	2 cut(s)	383, 1042
NlaIII	CATG	5 cut(s)	263, 645, 688, 800, 846
NlaIV	GGNNCC	5 cut(s)	238, 385, 433, 739, 840
NmeAIII	GCCGAG	1 cut(s)	800
NmuCI	GTSAC	2 cut(s)	502, 924
NsiI	ATGCAT	2 cut(s)	173, 798
NspV	TTCGAA	1 cut(s)	1212
PctI	GAATGC	2 cut(s)	229, 272
PdmI	GAANNNNTTC	1 cut(s)	1066
PfeI	GAWTC	1 cut(s)	647
PluTI	GGCGCC	1 cut(s)	842
PpuMI	RGGWCCY	1 cut(s)	941
Psp5II	RGGWCCY	1 cut(s)	941
Psp6I	CCWGG	3 cut(s)	325, 345, 417
PspGI	CCWGG	3 cut(s)	325, 345, 417
PspN4I	GGNNCC	5 cut(s)	238, 385, 433, 739, 840
PspPI	GGNCC	5 cut(s)	108, 397, 941, 1152, 1204
PspPPI	RGGWCCY	1 cut(s)	941
PstNI	CAGNNNCTG	2 cut(s)	488, 944
PsuI	RGATCY	1 cut(s)	383
PvuII	CAGCTG	2 cut(s)	485, 1097
RsaI	GTAC	4 cut(s)	536, 991, 1003, 1177
RsaNI	GTAC	4 cut(s)	535, 990, 1002, 1176
Sau3AI	GATC	2 cut(s)	383, 1042
Sau96I	GGNCC	5 cut(s)	108, 397, 941, 1152, 1204
ScaI	AGTACT	1 cut(s)	991
ScrFI	CCNGG	3 cut(s)	327, 347, 419
SduI	GDGCHC	1 cut(s)	436
SfaNI	GCATC	6 cut(s)	158, 166, 262, 544, 703, 824
SfcI	CTRYAG	1 cut(s)	1083
SfoI	GGCGCC	1 cut(s)	840
SfuI	TTCGAA	1 cut(s)	1212
SinI	GGWCC	3 cut(s)	108, 941, 1204
SmlI	CTYRAG	2 cut(s)	603, 742
SmoI	CTYRAG	2 cut(s)	603, 742
Sse9I	AATT	9 cut(s)	241, 321, 574, 626, 997, 1020, 1164, 1181, 1221
SspDI	GGCGCC	1 cut(s)	838
StyD4I	CCNGG	3 cut(s)	325, 345, 417
StyI	CCWWGG	3 cut(s)	366, 453, 1155
TaaI	ACNGT	1 cut(s)	694
TaiI	ACGT	1 cut(s)	66
TaqI	TCGA	1 cut(s)	1212
TasI	AATT	9 cut(s)	241, 321, 574, 626, 997, 1020, 1164, 1181, 1221
TatI	WGTACW	4 cut(s)	534, 989, 1001, 1175
TauI	GCSGC	4 cut(s)	11, 137, 140, 1153
TfiI	GAWTC	1 cut(s)	647
TscAI	CASTG	1 cut(s)	697
TseFI	GTSAC	2 cut(s)	502, 924
Tsp45I	GTSAC	2 cut(s)	502, 924
TspDTI	ATGAA	3 cut(s)	48, 902, 974
TspRI	CASTG	1 cut(s)	697
VpaK11BI	GGWCC	3 cut(s)	108, 941, 1204
XapI	RAATTY	2 cut(s)	574, 1020
XmnI	GAANNNNTTC	1 cut(s)	1066
ZrmI	AGTACT	1 cut(s)	991
Zsp2I	ATGCAT	2 cut(s)	173, 798

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.