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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G56250 AT3G56250 AT3G56250 AT3G56250 |
| fragaria_vesca | FvH4_7g25540 FvH4_7g25540 FvH4_7g25540 FvH4_7g25540 FvH4_7g25540 FvH4_7g25540 FvH4_7g25540 FvH4_7g25540 |
| malus_domestica | MD01G1162300.v1.1 MD07G1230300.v1.1 |
| prunus_persica | Prupe.2G260200_v2.0.a1 Prupe.2G260200_v2.0.a1 |
| pyrus_communis | pycom07g20780 |
| rosa_chinensis | RchiOBHm_Chr1g0371541 |
| rosa_laevigata | RLG00000026953 |
| rosa_multiflora | Rmu_sc0000948.1_g000035 Rmu_sc0004208.1_g000019 |
| rosa_roxburghii | Rroxscaffold_4G00285570 Rroxscaffold_4G00304530 |
| rosa_rugosa | Rorug01G0365100 Rorug01G0365200 |
| rosa_samantha | Rh1AG375100 Rh1BG338600 Rh1CG095700 Rh1CG351900 Rh1DG369600 Rh3AG109200 Rh3CG114500 |
| rosa_wichuraiana | Rw1G033000 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 444 |
| Acc65I | GGTACC | 1 cut(s) | 281 |
| AccB1I | GGYRCC | 2 cut(s) | 281, 493 |
| AccBSI | CCGCTC | 1 cut(s) | 226 |
| AccIII | TCCGGA | 1 cut(s) | 405 |
| AciI | CCGC | 5 cut(s) | 138, 195, 221, 224, 491 |
| AclWI | GGATC | 1 cut(s) | 397 |
| AcoI | YGGCCR | 1 cut(s) | 174 |
| AfaI | GTAC | 4 cut(s) | 283, 320, 375, 560 |
| AgsI | TTSAA | 2 cut(s) | 545, 584 |
| AluBI | AGCT | 3 cut(s) | 8, 166, 500 |
| AluI | AGCT | 3 cut(s) | 8, 166, 500 |
| Alw26I | GTCTC | 1 cut(s) | 322 |
| AlwI | GGATC | 1 cut(s) | 397 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 291 |
| Aor13HI | TCCGGA | 1 cut(s) | 405 |
| AoxI | GGCC | 1 cut(s) | 174 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 18, 50 |
| Asp718I | GGTACC | 1 cut(s) | 281 |
| AsuII | TTCGAA | 1 cut(s) | 37 |
| BanI | GGYRCC | 2 cut(s) | 281, 493 |
| BbsI | GAAGAC | 2 cut(s) | 31, 438 |
| BceAI | ACGGC | 1 cut(s) | 480 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 557, 591 |
| BcoDI | GTCTC | 1 cut(s) | 322 |
| BisI | GCNGC | 3 cut(s) | 195, 224, 492 |
| BlpI | GCTNAGC | 1 cut(s) | 9 |
| BlsI | GCNGC | 3 cut(s) | 196, 225, 493 |
| BmiI | GGNNCC | 3 cut(s) | 283, 468, 495 |
| BmsI | GCATC | 1 cut(s) | 565 |
| BoxI | GACNNNNGTC | 1 cut(s) | 188 |
| BpiI | GAAGAC | 2 cut(s) | 31, 438 |
| Bpu10I | CCTNAGC | 1 cut(s) | 207 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 9 |
| Bpu14I | TTCGAA | 1 cut(s) | 37 |
| BsaJI | CCNNGG | 2 cut(s) | 171, 462 |
| BsaWI | WCCGGW | 1 cut(s) | 405 |
| Bse1I | ACTGG | 1 cut(s) | 285 |
| BseAI | TCCGGA | 1 cut(s) | 405 |
| BseDI | CCNNGG | 2 cut(s) | 171, 462 |
| BseMII | CTCAG | 2 cut(s) | 20, 63 |
| BseNI | ACTGG | 1 cut(s) | 285 |
| BseRI | GAGGAG | 4 cut(s) | 160, 246, 459, 611 |
| BseYI | CCCAGC | 1 cut(s) | 500 |
| BsgI | GTGCAG | 2 cut(s) | 321, 378 |
| BshFI | GGCC | 1 cut(s) | 176 |
| BshNI | GGYRCC | 2 cut(s) | 281, 493 |
| BsiSI | CCGG | 1 cut(s) | 406 |
| BsmAI | GTCTC | 1 cut(s) | 322 |
| BsnI | GGCC | 1 cut(s) | 176 |
| Bsp119I | TTCGAA | 1 cut(s) | 37 |
| Bsp13I | TCCGGA | 1 cut(s) | 405 |
| Bsp1407I | TGTACA | 1 cut(s) | 318 |
| Bsp143I | GATC | 1 cut(s) | 402 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 9 |
| BspACI | CCGC | 5 cut(s) | 138, 195, 221, 224, 491 |
| BspANI | GGCC | 1 cut(s) | 176 |
| BspCNI | CTCAG | 2 cut(s) | 21, 62 |
| BspEI | TCCGGA | 1 cut(s) | 405 |
| BspLI | GGNNCC | 3 cut(s) | 283, 468, 495 |
| BspPI | GGATC | 1 cut(s) | 397 |
| BspT104I | TTCGAA | 1 cut(s) | 37 |
| BspT107I | GGYRCC | 2 cut(s) | 281, 493 |
| BsrBI | CCGCTC | 1 cut(s) | 226 |
| BsrGI | TGTACA | 1 cut(s) | 318 |
| BsrI | ACTGG | 1 cut(s) | 285 |
| BssECI | CCNNGG | 2 cut(s) | 171, 462 |
| BssMI | GATC | 1 cut(s) | 402 |
| Bst4CI | ACNGT | 3 cut(s) | 293, 299, 373 |
| Bst6I | CTCTTC | 4 cut(s) | 118, 277, 344, 588 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 526 |
| BstAUI | TGTACA | 1 cut(s) | 318 |
| BstBI | TTCGAA | 1 cut(s) | 37 |
| BstC8I | GCNNGC | 1 cut(s) | 522 |
| BstDEI | CTNAG | 4 cut(s) | 9, 29, 49, 207 |
| BstDSI | CCRYGG | 1 cut(s) | 462 |
| BstKTI | GATC | 1 cut(s) | 405 |
| BstMAI | GTCTC | 1 cut(s) | 322 |
| BstMBI | GATC | 1 cut(s) | 402 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 137, 497, 506, 526, 563 |
| BstNSI | RCATGY | 1 cut(s) | 524 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 188 |
| BstV2I | GAAGAC | 2 cut(s) | 31, 438 |
| BstX2I | RGATCY | 1 cut(s) | 402 |
| BstYI | RGATCY | 1 cut(s) | 402 |
| BsuRI | GGCC | 1 cut(s) | 176 |
| BtgI | CCRYGG | 1 cut(s) | 462 |
| BtsI | GCAGTG | 1 cut(s) | 491 |
| BtsIMutI | CAGTG | 5 cut(s) | 292, 321, 338, 369, 491 |
| Cac8I | GCNNGC | 1 cut(s) | 522 |
| CaiI | CAGNNNCTG | 1 cut(s) | 291 |
| Csp6I | GTAC | 4 cut(s) | 282, 319, 374, 559 |
| CviAII | CATG | 2 cut(s) | 517, 521 |
| CviQI | GTAC | 4 cut(s) | 282, 319, 374, 559 |
| DdeI | CTNAG | 4 cut(s) | 9, 29, 49, 207 |
| DpnI | GATC | 1 cut(s) | 404 |
| DpnII | GATC | 1 cut(s) | 402 |
| DraI | TTTAAA | 1 cut(s) | 201 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 444 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 444 |
| EaeI | YGGCCR | 1 cut(s) | 174 |
| Eam1104I | CTCTTC | 4 cut(s) | 118, 277, 344, 588 |
| EarI | CTCTTC | 4 cut(s) | 118, 277, 344, 588 |
| EciI | GGCGGA | 1 cut(s) | 210 |
| EcoT22I | ATGCAT | 2 cut(s) | 522, 580 |
| FaeI | CATG | 2 cut(s) | 520, 524 |
| FaiI | YATR | 5 cut(s) | 68, 413, 441, 518, 522 |
| FatI | CATG | 2 cut(s) | 516, 520 |
| Fnu4HI | GCNGC | 3 cut(s) | 195, 224, 492 |
| Fsp4HI | GCNGC | 3 cut(s) | 195, 224, 492 |
| GluI | GCNGC | 3 cut(s) | 195, 224, 492 |
| GsaI | CCCAGC | 1 cut(s) | 504 |
| HaeIII | GGCC | 1 cut(s) | 176 |
| HapII | CCGG | 1 cut(s) | 406 |
| Hin1II | CATG | 2 cut(s) | 520, 524 |
| HinfI | GANTC | 3 cut(s) | 157, 458, 605 |
| HpaII | CCGG | 1 cut(s) | 406 |
| Hpy166II | GTNNAC | 2 cut(s) | 319, 321 |
| Hpy188I | TCNGA | 2 cut(s) | 52, 327 |
| Hpy188III | TCNNGA | 1 cut(s) | 406 |
| Hpy8I | GTNNAC | 2 cut(s) | 319, 321 |
| Hpy99I | CGWCG | 2 cut(s) | 127, 194 |
| HpyAV | CCTTC | 2 cut(s) | 246, 255 |
| HpyCH4III | ACNGT | 3 cut(s) | 293, 299, 373 |
| HpyCH4V | TGCA | 5 cut(s) | 57, 338, 395, 520, 578 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 137, 497, 506, 526, 563 |
| HpyF3I | CTNAG | 4 cut(s) | 9, 29, 49, 207 |
| Hsp92II | CATG | 2 cut(s) | 520, 524 |
| Kpn2I | TCCGGA | 1 cut(s) | 405 |
| KpnI | GGTACC | 1 cut(s) | 285 |
| Kzo9I | GATC | 1 cut(s) | 402 |
| LmnI | GCTCC | 3 cut(s) | 223, 231, 472 |
| LweI | GCATC | 1 cut(s) | 565 |
| MaeIII | GTNAC | 2 cut(s) | 287, 293 |
| MalI | GATC | 1 cut(s) | 404 |
| MbiI | CCGCTC | 1 cut(s) | 226 |
| MboI | GATC | 1 cut(s) | 402 |
| MboII | GAAGA | 8 cut(s) | 33, 36, 105, 264, 267, 361, 443, 605 |
| MflI | RGATCY | 1 cut(s) | 402 |
| MluCI | AATT | 2 cut(s) | 231, 422 |
| Mph1103I | ATGCAT | 2 cut(s) | 522, 580 |
| MroI | TCCGGA | 1 cut(s) | 405 |
| MseI | TTAA | 2 cut(s) | 200, 425 |
| MspA1I | CMGCKG | 1 cut(s) | 500 |
| MspI | CCGG | 1 cut(s) | 406 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 137, 497, 506, 526, 563 |
| NdeII | GATC | 1 cut(s) | 402 |
| NlaIII | CATG | 2 cut(s) | 520, 524 |
| NlaIV | GGNNCC | 3 cut(s) | 283, 468, 495 |
| NmeAIII | GCCGAG | 2 cut(s) | 152, 592 |
| NmuCI | GTSAC | 2 cut(s) | 287, 293 |
| NsiI | ATGCAT | 2 cut(s) | 522, 580 |
| NspI | RCATGY | 1 cut(s) | 524 |
| NspV | TTCGAA | 1 cut(s) | 37 |
| PaeI | GCATGC | 1 cut(s) | 524 |
| PfeI | GAWTC | 3 cut(s) | 157, 458, 605 |
| PkrI | GCNGC | 3 cut(s) | 196, 225, 493 |
| PshAI | GACNNNNGTC | 1 cut(s) | 188 |
| PspFI | CCCAGC | 1 cut(s) | 500 |
| PspN4I | GGNNCC | 3 cut(s) | 283, 468, 495 |
| PstNI | CAGNNNCTG | 1 cut(s) | 291 |
| PsuI | RGATCY | 1 cut(s) | 402 |
| PvuII | CAGCTG | 1 cut(s) | 500 |
| RsaI | GTAC | 4 cut(s) | 283, 320, 375, 560 |
| RsaNI | GTAC | 4 cut(s) | 282, 319, 374, 559 |
| SaqAI | TTAA | 2 cut(s) | 200, 425 |
| SatI | GCNGC | 3 cut(s) | 195, 224, 492 |
| Sau3AI | GATC | 1 cut(s) | 402 |
| SetI | ASST | 7 cut(s) | 10, 113, 168, 272, 379, 502, 603 |
| SfaNI | GCATC | 1 cut(s) | 565 |
| SfuI | TTCGAA | 1 cut(s) | 37 |
| SphI | GCATGC | 1 cut(s) | 524 |
| Sse9I | AATT | 2 cut(s) | 231, 422 |
| SsiI | CCGC | 5 cut(s) | 138, 195, 221, 224, 491 |
| TaaI | ACNGT | 3 cut(s) | 293, 299, 373 |
| TaqI | TCGA | 3 cut(s) | 37, 266, 603 |
| TasI | AATT | 2 cut(s) | 231, 422 |
| TatI | WGTACW | 1 cut(s) | 318 |
| TauI | GCSGC | 3 cut(s) | 197, 226, 494 |
| TfiI | GAWTC | 3 cut(s) | 157, 458, 605 |
| Tru1I | TTAA | 2 cut(s) | 200, 425 |
| Tru9I | TTAA | 2 cut(s) | 200, 425 |
| TscAI | CASTG | 5 cut(s) | 292, 321, 345, 376, 491 |
| TseFI | GTSAC | 2 cut(s) | 287, 293 |
| Tsp45I | GTSAC | 2 cut(s) | 287, 293 |
| TspGWI | ACGGA | 1 cut(s) | 450 |
| TspRI | CASTG | 5 cut(s) | 292, 321, 345, 376, 491 |
| XceI | RCATGY | 1 cut(s) | 524 |
| Zsp2I | ATGCAT | 2 cut(s) | 522, 580 |