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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G56250 AT3G56250 AT3G56250 AT3G56250 |
| fragaria_vesca | FvH4_7g25540 FvH4_7g25540 FvH4_7g25540 FvH4_7g25540 FvH4_7g25540 FvH4_7g25540 FvH4_7g25540 FvH4_7g25540 |
| malus_domestica | MD01G1162300.v1.1 MD07G1230300.v1.1 |
| prunus_persica | Prupe.2G260200_v2.0.a1 Prupe.2G260200_v2.0.a1 |
| pyrus_communis | pycom07g20780 |
| rosa_chinensis | RchiOBHm_Chr1g0371541 |
| rosa_laevigata | RLG00000026953 |
| rosa_multiflora | Rmu_sc0000948.1_g000035 Rmu_sc0004208.1_g000019 |
| rosa_roxburghii | Rroxscaffold_4G00285570 Rroxscaffold_4G00304530 |
| rosa_rugosa | Rorug01G0365100 Rorug01G0365200 |
| rosa_samantha | Rh1AG375100 Rh1BG338600 Rh1CG095700 Rh1CG351900 Rh1DG369600 Rh3AG109200 Rh3CG114500 |
| rosa_wichuraiana | Rw1G033000 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 335, 422 |
| AccI | GTMKAC | 2 cut(s) | 1266, 1394 |
| AciI | CCGC | 3 cut(s) | 215, 415, 573 |
| AclWI | GGATC | 1 cut(s) | 1421 |
| AcoI | YGGCCR | 1 cut(s) | 1399 |
| AcsI | RAATTY | 2 cut(s) | 812, 936 |
| AcuI | CTGAAG | 1 cut(s) | 893 |
| AfaI | GTAC | 3 cut(s) | 520, 781, 903 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 1233 |
| AgsI | TTSAA | 8 cut(s) | 188, 355, 563, 758, 818, 841, 1037, 1076 |
| AhlI | ACTAGT | 1 cut(s) | 794 |
| AjnI | CCWGG | 2 cut(s) | 177, 193 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 644, 676 |
| AleI | CACNNNNGTG | 1 cut(s) | 78 |
| AluBI | AGCT | 6 cut(s) | 296, 578, 686, 1040, 1072, 1313 |
| AluI | AGCT | 6 cut(s) | 296, 578, 686, 1040, 1072, 1313 |
| Alw21I | GWGCWC | 1 cut(s) | 688 |
| Alw26I | GTCTC | 5 cut(s) | 535, 576, 721, 740, 1115 |
| AlwI | GGATC | 1 cut(s) | 1421 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 749 |
| Ama87I | CYCGRG | 1 cut(s) | 804 |
| AoxI | GGCC | 9 cut(s) | 16, 203, 300, 400, 454, 468, 570, 1224, 1399 |
| ApaI | GGGCCC | 1 cut(s) | 1228 |
| ApeKI | GCWGC | 7 cut(s) | 167, 248, 437, 440, 575, 1028, 1040 |
| ApoI | RAATTY | 2 cut(s) | 812, 936 |
| AseI | ATTAAT | 1 cut(s) | 999 |
| AspS9I | GGNCC | 5 cut(s) | 191, 204, 664, 1224, 1225 |
| AsuHPI | GGTGA | 8 cut(s) | 173, 209, 242, 581, 611, 634, 1090, 1295 |
| AvaI | CYCGRG | 1 cut(s) | 804 |
| AvaII | GGWCC | 2 cut(s) | 191, 664 |
| BaeGI | GKGCMC | 1 cut(s) | 1228 |
| BanII | GRGCYC | 2 cut(s) | 688, 1228 |
| BbsI | GAAGAC | 1 cut(s) | 609 |
| Bbv12I | GWGCWC | 1 cut(s) | 688 |
| BbvCI | CCTCAGC | 1 cut(s) | 297 |
| BbvI | GCAGC | 7 cut(s) | 179, 235, 424, 452, 587, 1015, 1027 |
| BccI | CCATC | 2 cut(s) | 130, 1127 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 690, 724 |
| BciT130I | CCWGG | 2 cut(s) | 179, 195 |
| BclI | TGATCA | 1 cut(s) | 100 |
| BcoDI | GTCTC | 5 cut(s) | 535, 576, 721, 740, 1115 |
| BcuI | ACTAGT | 1 cut(s) | 794 |
| BfaI | CTAG | 3 cut(s) | 795, 933, 1295 |
| BfmI | CTRYAG | 2 cut(s) | 249, 438 |
| BisI | GCNGC | 8 cut(s) | 168, 249, 438, 441, 573, 576, 1029, 1041 |
| BlsI | GCNGC | 8 cut(s) | 169, 250, 439, 442, 574, 577, 1030, 1042 |
| Bme1390I | CCNGG | 2 cut(s) | 179, 195 |
| Bme18I | GGWCC | 2 cut(s) | 191, 664 |
| BmeT110I | CYCGRG | 1 cut(s) | 804 |
| BmgT120I | GGNCC | 5 cut(s) | 191, 204, 664, 1224, 1225 |
| BmiI | GGNNCC | 3 cut(s) | 855, 1225, 1226 |
| BmrFI | CCNGG | 2 cut(s) | 179, 195 |
| BmsI | GCATC | 6 cut(s) | 154, 273, 373, 402, 781, 868 |
| BpiI | GAAGAC | 1 cut(s) | 609 |
| BpmI | CTGGAG | 3 cut(s) | 600, 664, 1293 |
| Bpu10I | CCTNAGC | 1 cut(s) | 297 |
| BsaJI | CCNNGG | 5 cut(s) | 267, 307, 592, 973, 1317 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 1233 |
| Bse118I | RCCGGY | 1 cut(s) | 1397 |
| Bse1I | ACTGG | 3 cut(s) | 471, 1129, 1207 |
| Bse3DI | GCAATG | 3 cut(s) | 393, 444, 1263 |
| BseBI | CCWGG | 2 cut(s) | 179, 195 |
| BseDI | CCNNGG | 5 cut(s) | 267, 307, 592, 973, 1317 |
| BseGI | GGATG | 4 cut(s) | 10, 263, 883, 1099 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 1233 |
| BseMI | GCAATG | 3 cut(s) | 393, 444, 1263 |
| BseMII | CTCAG | 1 cut(s) | 288 |
| BseNI | ACTGG | 3 cut(s) | 471, 1129, 1207 |
| BseRI | GAGGAG | 1 cut(s) | 739 |
| BseSI | GKGCMC | 1 cut(s) | 1228 |
| BseXI | GCAGC | 7 cut(s) | 179, 235, 424, 452, 587, 1015, 1027 |
| Bsh1285I | CGRYCG | 1 cut(s) | 1398 |
| BshFI | GGCC | 9 cut(s) | 18, 205, 302, 402, 456, 470, 572, 1226, 1401 |
| BsiEI | CGRYCG | 1 cut(s) | 1398 |
| BsiHKAI | GWGCWC | 1 cut(s) | 688 |
| BsiHKCI | CYCGRG | 1 cut(s) | 804 |
| BsiSI | CCGG | 1 cut(s) | 1398 |
| BslFI | GGGAC | 2 cut(s) | 22, 326 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 1233 |
| BsmAI | GTCTC | 5 cut(s) | 535, 576, 721, 740, 1115 |
| BsmFI | GGGAC | 2 cut(s) | 22, 326 |
| BsmI | GAATGC | 1 cut(s) | 1258 |
| BsnI | GGCC | 9 cut(s) | 18, 205, 302, 402, 456, 470, 572, 1226, 1401 |
| BsoBI | CYCGRG | 1 cut(s) | 804 |
| Bsp120I | GGGCCC | 1 cut(s) | 1224 |
| Bsp1286I | GDGCHC | 2 cut(s) | 688, 1228 |
| Bsp1407I | TGTACA | 1 cut(s) | 901 |
| Bsp143I | GATC | 3 cut(s) | 34, 100, 1413 |
| Bsp19I | CCATGG | 1 cut(s) | 267 |
| BspACI | CCGC | 3 cut(s) | 215, 415, 573 |
| BspANI | GGCC | 9 cut(s) | 18, 205, 302, 402, 456, 470, 572, 1226, 1401 |
| BspCNI | CTCAG | 1 cut(s) | 289 |
| BspHI | TCATGA | 1 cut(s) | 1179 |
| BspLI | GGNNCC | 3 cut(s) | 855, 1225, 1226 |
| BspMAI | CTGCAG | 2 cut(s) | 253, 442 |
| BspPI | GGATC | 1 cut(s) | 1421 |
| BspQI | GCTCTTC | 1 cut(s) | 934 |
| BsrDI | GCAATG | 3 cut(s) | 393, 444, 1263 |
| BsrFI | RCCGGY | 1 cut(s) | 1397 |
| BsrGI | TGTACA | 1 cut(s) | 901 |
| BsrI | ACTGG | 3 cut(s) | 471, 1129, 1207 |
| BssAI | RCCGGY | 1 cut(s) | 1397 |
| BssECI | CCNNGG | 5 cut(s) | 267, 307, 592, 973, 1317 |
| BssMI | GATC | 3 cut(s) | 34, 100, 1413 |
| BssNAI | GTATAC | 1 cut(s) | 1267 |
| BssT1I | CCWWGG | 5 cut(s) | 267, 307, 592, 973, 1317 |
| Bst1107I | GTATAC | 1 cut(s) | 1267 |
| Bst2UI | CCWGG | 2 cut(s) | 179, 195 |
| Bst4CI | ACNGT | 7 cut(s) | 230, 243, 319, 340, 632, 767, 1147 |
| Bst6I | CTCTTC | 1 cut(s) | 934 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 446, 1025 |
| BstAUI | TGTACA | 1 cut(s) | 901 |
| BstC8I | GCNNGC | 2 cut(s) | 400, 709 |
| BstDEI | CTNAG | 3 cut(s) | 297, 668, 689 |
| BstDSI | CCRYGG | 1 cut(s) | 267 |
| BstEII | GGTNACC | 1 cut(s) | 217 |
| BstF5I | GGATG | 4 cut(s) | 10, 263, 883, 1099 |
| BstKTI | GATC | 3 cut(s) | 37, 103, 1416 |
| BstMAI | GTCTC | 5 cut(s) | 535, 576, 721, 740, 1115 |
| BstMBI | GATC | 3 cut(s) | 34, 100, 1413 |
| BstMCI | CGRYCG | 1 cut(s) | 1398 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 399, 446, 1025, 1037 |
| BstNI | CCWGG | 2 cut(s) | 179, 195 |
| BstPI | GGTNACC | 1 cut(s) | 217 |
| BstSCI | CCNGG | 2 cut(s) | 177, 193 |
| BstSFI | CTRYAG | 2 cut(s) | 249, 438 |
| BstSLI | GKGCMC | 1 cut(s) | 1228 |
| BstV1I | GCAGC | 7 cut(s) | 179, 235, 424, 452, 587, 1015, 1027 |
| BstV2I | GAAGAC | 1 cut(s) | 609 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 26 |
| BstZ17I | GTATAC | 1 cut(s) | 1267 |
| BsuRI | GGCC | 9 cut(s) | 18, 205, 302, 402, 456, 470, 572, 1226, 1401 |
| BtgI | CCRYGG | 1 cut(s) | 267 |
| BtsCI | GGATG | 4 cut(s) | 10, 263, 883, 1099 |
| BtsI | GCAGTG | 1 cut(s) | 904 |
| BtsIMutI | CAGTG | 3 cut(s) | 138, 478, 904 |
| Cac8I | GCNNGC | 2 cut(s) | 400, 709 |
| CaiI | CAGNNNCTG | 1 cut(s) | 749 |
| CciI | TCATGA | 1 cut(s) | 1179 |
| Cfr10I | RCCGGY | 1 cut(s) | 1397 |
| Cfr13I | GGNCC | 5 cut(s) | 191, 204, 664, 1224, 1225 |
| CseI | GACGC | 1 cut(s) | 356 |
| CsiI | ACCWGGT | 1 cut(s) | 177 |
| Csp6I | GTAC | 3 cut(s) | 519, 780, 902 |
| CviAII | CATG | 8 cut(s) | 20, 54, 128, 268, 829, 886, 905, 1180 |
| CviQI | GTAC | 3 cut(s) | 519, 780, 902 |
| DdeI | CTNAG | 3 cut(s) | 297, 668, 689 |
| DpnI | GATC | 3 cut(s) | 36, 102, 1415 |
| DpnII | GATC | 3 cut(s) | 34, 100, 1413 |
| EaeI | YGGCCR | 1 cut(s) | 1399 |
| Eam1104I | CTCTTC | 1 cut(s) | 934 |
| EarI | CTCTTC | 1 cut(s) | 934 |
| Ecl136II | GAGCTC | 1 cut(s) | 686 |
| Eco130I | CCWWGG | 5 cut(s) | 267, 307, 592, 973, 1317 |
| Eco147I | AGGCCT | 1 cut(s) | 302 |
| Eco24I | GRGCYC | 2 cut(s) | 688, 1228 |
| Eco47I | GGWCC | 2 cut(s) | 191, 664 |
| Eco53kI | GAGCTC | 1 cut(s) | 686 |
| Eco57I | CTGAAG | 1 cut(s) | 893 |
| Eco88I | CYCGRG | 1 cut(s) | 804 |
| Eco91I | GGTNACC | 1 cut(s) | 217 |
| EcoICRI | GAGCTC | 1 cut(s) | 686 |
| EcoO109I | RGGNCCY | 4 cut(s) | 191, 204, 1224, 1225 |
| EcoO65I | GGTNACC | 1 cut(s) | 217 |
| EcoRI | GAATTC | 1 cut(s) | 936 |
| EcoRII | CCWGG | 2 cut(s) | 177, 193 |
| EcoT14I | CCWWGG | 5 cut(s) | 267, 307, 592, 973, 1317 |
| EcoT38I | GRGCYC | 2 cut(s) | 688, 1228 |
| ErhI | CCWWGG | 5 cut(s) | 267, 307, 592, 973, 1317 |
| FaeI | CATG | 8 cut(s) | 23, 57, 131, 271, 832, 889, 908, 1183 |
| FaqI | GGGAC | 2 cut(s) | 22, 326 |
| FatI | CATG | 8 cut(s) | 19, 53, 127, 267, 828, 885, 904, 1179 |
| FauNDI | CATATG | 1 cut(s) | 1021 |
| FbaI | TGATCA | 1 cut(s) | 100 |
| FblI | GTMKAC | 2 cut(s) | 1266, 1394 |
| Fnu4HI | GCNGC | 8 cut(s) | 168, 249, 438, 441, 573, 576, 1029, 1041 |
| FokI | GGATG | 4 cut(s) | 17, 250, 890, 1106 |
| FriOI | GRGCYC | 2 cut(s) | 688, 1228 |
| Fsp4HI | GCNGC | 8 cut(s) | 168, 249, 438, 441, 573, 576, 1029, 1041 |
| FspBI | CTAG | 3 cut(s) | 795, 933, 1295 |
| GluI | GCNGC | 8 cut(s) | 168, 249, 438, 441, 573, 576, 1029, 1041 |
| GsuI | CTGGAG | 3 cut(s) | 600, 664, 1293 |
| HaeIII | GGCC | 9 cut(s) | 18, 205, 302, 402, 456, 470, 572, 1226, 1401 |
| HapII | CCGG | 1 cut(s) | 1398 |
| HgaI | GACGC | 1 cut(s) | 356 |
| Hin1II | CATG | 8 cut(s) | 23, 57, 131, 271, 832, 889, 908, 1183 |
| HincII | GTYRAC | 1 cut(s) | 1395 |
| HindII | GTYRAC | 1 cut(s) | 1395 |
| HinfI | GANTC | 2 cut(s) | 359, 1153 |
| HpaII | CCGG | 1 cut(s) | 1398 |
| HphI | GGTGA | 8 cut(s) | 173, 209, 242, 581, 611, 634, 1090, 1295 |
| Hpy166II | GTNNAC | 3 cut(s) | 902, 1267, 1395 |
| Hpy188I | TCNGA | 3 cut(s) | 278, 873, 1152 |
| Hpy188III | TCNNGA | 5 cut(s) | 681, 933, 1004, 1076, 1180 |
| Hpy8I | GTNNAC | 3 cut(s) | 902, 1267, 1395 |
| HpyAV | CCTTC | 6 cut(s) | 145, 182, 460, 562, 709, 868 |
| HpyCH4III | ACNGT | 7 cut(s) | 230, 243, 319, 340, 632, 767, 1147 |
| HpyCH4V | TGCA | 9 cut(s) | 23, 167, 251, 329, 440, 772, 881, 990, 1256 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 399, 446, 1025, 1037 |
| HpyF3I | CTNAG | 3 cut(s) | 297, 668, 689 |
| Hsp92II | CATG | 8 cut(s) | 23, 57, 131, 271, 832, 889, 908, 1183 |
| Ksp22I | TGATCA | 1 cut(s) | 100 |
| Kzo9I | GATC | 3 cut(s) | 34, 100, 1413 |
| LguI | GCTCTTC | 1 cut(s) | 934 |
| LmnI | GCTCC | 3 cut(s) | 853, 1069, 1318 |
| Lsp1109I | GCAGC | 7 cut(s) | 179, 235, 424, 452, 587, 1015, 1027 |
| LweI | GCATC | 6 cut(s) | 154, 273, 373, 402, 781, 868 |
| MabI | ACCWGGT | 1 cut(s) | 177 |
| MaeI | CTAG | 3 cut(s) | 795, 933, 1295 |
| MaeIII | GTNAC | 4 cut(s) | 197, 217, 696, 1096 |
| MalI | GATC | 3 cut(s) | 36, 102, 1415 |
| MboI | GATC | 3 cut(s) | 34, 100, 1413 |
| MboII | GAAGA | 6 cut(s) | 245, 266, 614, 829, 921, 1417 |
| MfeI | CAATTG | 1 cut(s) | 24 |
| MhlI | GDGCHC | 2 cut(s) | 688, 1228 |
| MluCI | AATT | 9 cut(s) | 24, 625, 641, 658, 759, 812, 936, 1170, 1419 |
| MseI | TTAA | 6 cut(s) | 174, 645, 999, 1049, 1196, 1422 |
| MslI | CAYNNNNRTG | 3 cut(s) | 52, 78, 354 |
| MspA1I | CMGCKG | 1 cut(s) | 578 |
| MspI | CCGG | 1 cut(s) | 1398 |
| MspR9I | CCNGG | 2 cut(s) | 179, 195 |
| MunI | CAATTG | 1 cut(s) | 24 |
| Mva1269I | GAATGC | 1 cut(s) | 1258 |
| MvaI | CCWGG | 2 cut(s) | 179, 195 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 399, 446, 1025, 1037 |
| NcoI | CCATGG | 1 cut(s) | 267 |
| NdeI | CATATG | 1 cut(s) | 1021 |
| NdeII | GATC | 3 cut(s) | 34, 100, 1413 |
| NlaIII | CATG | 8 cut(s) | 23, 57, 131, 271, 832, 889, 908, 1183 |
| NlaIV | GGNNCC | 3 cut(s) | 855, 1225, 1226 |
| NmuCI | GTSAC | 2 cut(s) | 197, 1096 |
| OliI | CACNNNNGTG | 1 cut(s) | 78 |
| PaeR7I | CTCGAG | 1 cut(s) | 804 |
| PagI | TCATGA | 1 cut(s) | 1179 |
| PceI | AGGCCT | 1 cut(s) | 302 |
| PciSI | GCTCTTC | 1 cut(s) | 934 |
| PctI | GAATGC | 1 cut(s) | 1258 |
| PfeI | GAWTC | 2 cut(s) | 359, 1153 |
| PkrI | GCNGC | 8 cut(s) | 169, 250, 439, 442, 574, 577, 1030, 1042 |
| PpuMI | RGGWCCY | 1 cut(s) | 191 |
| PshBI | ATTAAT | 1 cut(s) | 999 |
| PsiI | TTATAA | 2 cut(s) | 335, 422 |
| Psp124BI | GAGCTC | 1 cut(s) | 688 |
| Psp5II | RGGWCCY | 1 cut(s) | 191 |
| Psp6I | CCWGG | 2 cut(s) | 177, 193 |
| PspEI | GGTNACC | 1 cut(s) | 217 |
| PspGI | CCWGG | 2 cut(s) | 177, 193 |
| PspN4I | GGNNCC | 3 cut(s) | 855, 1225, 1226 |
| PspOMI | GGGCCC | 1 cut(s) | 1224 |
| PspPI | GGNCC | 5 cut(s) | 191, 204, 664, 1224, 1225 |
| PspPPI | RGGWCCY | 1 cut(s) | 191 |
| PspXI | VCTCGAGB | 1 cut(s) | 804 |
| PstI | CTGCAG | 2 cut(s) | 253, 442 |
| PstNI | CAGNNNCTG | 1 cut(s) | 749 |
| PvuII | CAGCTG | 1 cut(s) | 578 |
| RsaI | GTAC | 3 cut(s) | 520, 781, 903 |
| RsaNI | GTAC | 3 cut(s) | 519, 780, 902 |
| RseI | CAYNNNNRTG | 3 cut(s) | 52, 78, 354 |
| SacI | GAGCTC | 1 cut(s) | 688 |
| SalI | GTCGAC | 1 cut(s) | 1393 |
| SapI | GCTCTTC | 1 cut(s) | 934 |
| SaqAI | TTAA | 6 cut(s) | 174, 645, 999, 1049, 1196, 1422 |
| SatI | GCNGC | 8 cut(s) | 168, 249, 438, 441, 573, 576, 1029, 1041 |
| Sau3AI | GATC | 3 cut(s) | 34, 100, 1413 |
| Sau96I | GGNCC | 5 cut(s) | 191, 204, 664, 1224, 1225 |
| ScrFI | CCNGG | 2 cut(s) | 179, 195 |
| SduI | GDGCHC | 2 cut(s) | 688, 1228 |
| SexAI | ACCWGGT | 1 cut(s) | 177 |
| SfaNI | GCATC | 6 cut(s) | 154, 273, 373, 402, 781, 868 |
| SfcI | CTRYAG | 2 cut(s) | 249, 438 |
| Sfr274I | CTCGAG | 1 cut(s) | 804 |
| SinI | GGWCC | 2 cut(s) | 191, 664 |
| SlaI | CTCGAG | 1 cut(s) | 804 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 52, 78, 354 |
| SmlI | CTYRAG | 1 cut(s) | 804 |
| SmoI | CTYRAG | 1 cut(s) | 804 |
| SpeI | ACTAGT | 1 cut(s) | 794 |
| Sse9I | AATT | 9 cut(s) | 24, 625, 641, 658, 759, 812, 936, 1170, 1419 |
| SseBI | AGGCCT | 1 cut(s) | 302 |
| SsiI | CCGC | 3 cut(s) | 215, 415, 573 |
| SspI | AATATT | 1 cut(s) | 1193 |
| SspMI | CTAG | 3 cut(s) | 795, 933, 1295 |
| SstI | GAGCTC | 1 cut(s) | 688 |
| StuI | AGGCCT | 1 cut(s) | 302 |
| StyD4I | CCNGG | 2 cut(s) | 177, 193 |
| StyI | CCWWGG | 5 cut(s) | 267, 307, 592, 973, 1317 |
| TaaI | ACNGT | 7 cut(s) | 230, 243, 319, 340, 632, 767, 1147 |
| TaqI | TCGA | 3 cut(s) | 609, 805, 1394 |
| TasI | AATT | 9 cut(s) | 24, 625, 641, 658, 759, 812, 936, 1170, 1419 |
| TatI | WGTACW | 1 cut(s) | 901 |
| TauI | GCSGC | 1 cut(s) | 575 |
| TfiI | GAWTC | 2 cut(s) | 359, 1153 |
| Tru1I | TTAA | 6 cut(s) | 174, 645, 999, 1049, 1196, 1422 |
| Tru9I | TTAA | 6 cut(s) | 174, 645, 999, 1049, 1196, 1422 |
| TscAI | CASTG | 3 cut(s) | 145, 478, 904 |
| TseFI | GTSAC | 2 cut(s) | 197, 1096 |
| TseI | GCWGC | 7 cut(s) | 167, 248, 437, 440, 575, 1028, 1040 |
| Tsp45I | GTSAC | 2 cut(s) | 197, 1096 |
| TspDTI | ATGAA | 3 cut(s) | 441, 1196, 1337 |
| TspRI | CASTG | 3 cut(s) | 145, 478, 904 |
| VpaK11BI | GGWCC | 2 cut(s) | 191, 664 |
| VspI | ATTAAT | 1 cut(s) | 999 |
| XapI | RAATTY | 2 cut(s) | 812, 936 |
| XbaI | TCTAGA | 1 cut(s) | 932 |
| XhoI | CTCGAG | 1 cut(s) | 804 |
| XmiI | GTMKAC | 2 cut(s) | 1266, 1394 |
| XspI | CTAG | 3 cut(s) | 795, 933, 1295 |